2026-03-13T12:27:11,906 Created temporary directory: /tmp/pip-ephem-wheel-cache-ouw5dd3w
2026-03-13T12:27:11,908 Created temporary directory: /tmp/pip-build-tracker-1q_sk3mx
2026-03-13T12:27:11,909 Initialized build tracking at /tmp/pip-build-tracker-1q_sk3mx
2026-03-13T12:27:11,909 Created build tracker: /tmp/pip-build-tracker-1q_sk3mx
2026-03-13T12:27:11,910 Entered build tracker: /tmp/pip-build-tracker-1q_sk3mx
2026-03-13T12:27:11,910 Created temporary directory: /tmp/pip-wheel-wep2gbo7
2026-03-13T12:27:11,914 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-03-13T12:27:11,916 Created temporary directory: /tmp/pip-ephem-wheel-cache-8hihf3al
2026-03-13T12:27:11,937 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-03-13T12:27:11,940 2 location(s) to search for versions of herbsyner-finder:
2026-03-13T12:27:11,940 * https://pypi.org/simple/herbsyner-finder/
2026-03-13T12:27:11,940 * https://www.piwheels.org/simple/herbsyner-finder/
2026-03-13T12:27:11,941 Fetching project page and analyzing links: https://pypi.org/simple/herbsyner-finder/
2026-03-13T12:27:11,942 Getting page https://pypi.org/simple/herbsyner-finder/
2026-03-13T12:27:11,943 Found index url https://pypi.org/simple
2026-03-13T12:27:12,154 Fetched page https://pypi.org/simple/herbsyner-finder/ as application/vnd.pypi.simple.v1+json
2026-03-13T12:27:12,156   Found link https://files.pythonhosted.org/packages/cd/d9/77f7a5d1b2824bf94fe7ad5b7536fe9915aad09a94fdd6e60f3fd5c3c478/herbsyner_finder-0.1.1.tar.gz (from https://pypi.org/simple/herbsyner-finder/) (requires-python:>=3.8), version: 0.1.1
2026-03-13T12:27:12,157 Fetching project page and analyzing links: https://www.piwheels.org/simple/herbsyner-finder/
2026-03-13T12:27:12,157 Getting page https://www.piwheels.org/simple/herbsyner-finder/
2026-03-13T12:27:12,158 Found index url https://www.piwheels.org/simple
2026-03-13T12:27:12,315 Fetched page https://www.piwheels.org/simple/herbsyner-finder/ as text/html
2026-03-13T12:27:12,316 Skipping link: not a file: https://www.piwheels.org/simple/herbsyner-finder/
2026-03-13T12:27:12,317 Skipping link: not a file: https://pypi.org/simple/herbsyner-finder/
2026-03-13T12:27:12,337 Given no hashes to check 1 links for project 'herbsyner-finder': discarding no candidates
2026-03-13T12:27:12,356 Collecting herbsyner-finder==0.1.1
2026-03-13T12:27:12,359   Created temporary directory: /tmp/pip-unpack-_8wmjuk5
2026-03-13T12:27:12,567   Downloading herbsyner_finder-0.1.1.tar.gz (24 kB)
2026-03-13T12:27:12,632   Added herbsyner-finder==0.1.1 from https://files.pythonhosted.org/packages/cd/d9/77f7a5d1b2824bf94fe7ad5b7536fe9915aad09a94fdd6e60f3fd5c3c478/herbsyner_finder-0.1.1.tar.gz to build tracker '/tmp/pip-build-tracker-1q_sk3mx'
2026-03-13T12:27:12,633   Running setup.py (path:/tmp/pip-wheel-wep2gbo7/herbsyner-finder_29ee9a7811a949c1b69f7fd15b04a47d/setup.py) egg_info for package herbsyner-finder
2026-03-13T12:27:12,634   Created temporary directory: /tmp/pip-pip-egg-info-lcezbhhc
2026-03-13T12:27:12,635   Preparing metadata (setup.py): started
2026-03-13T12:27:12,636   Running command python setup.py egg_info
2026-03-13T12:27:13,514   running egg_info
2026-03-13T12:27:13,541   creating /tmp/pip-pip-egg-info-lcezbhhc/herbSyner_Finder.egg-info
2026-03-13T12:27:13,542   writing /tmp/pip-pip-egg-info-lcezbhhc/herbSyner_Finder.egg-info/PKG-INFO
2026-03-13T12:27:13,546   writing dependency_links to /tmp/pip-pip-egg-info-lcezbhhc/herbSyner_Finder.egg-info/dependency_links.txt
2026-03-13T12:27:13,548   writing requirements to /tmp/pip-pip-egg-info-lcezbhhc/herbSyner_Finder.egg-info/requires.txt
2026-03-13T12:27:13,549   writing top-level names to /tmp/pip-pip-egg-info-lcezbhhc/herbSyner_Finder.egg-info/top_level.txt
2026-03-13T12:27:13,551   writing manifest file '/tmp/pip-pip-egg-info-lcezbhhc/herbSyner_Finder.egg-info/SOURCES.txt'
2026-03-13T12:27:13,642   reading manifest file '/tmp/pip-pip-egg-info-lcezbhhc/herbSyner_Finder.egg-info/SOURCES.txt'
2026-03-13T12:27:13,645   writing manifest file '/tmp/pip-pip-egg-info-lcezbhhc/herbSyner_Finder.egg-info/SOURCES.txt'
2026-03-13T12:27:13,753   Preparing metadata (setup.py): finished with status 'done'
2026-03-13T12:27:13,757   Source in /tmp/pip-wheel-wep2gbo7/herbsyner-finder_29ee9a7811a949c1b69f7fd15b04a47d has version 0.1.1, which satisfies requirement herbsyner-finder==0.1.1 from https://files.pythonhosted.org/packages/cd/d9/77f7a5d1b2824bf94fe7ad5b7536fe9915aad09a94fdd6e60f3fd5c3c478/herbsyner_finder-0.1.1.tar.gz
2026-03-13T12:27:13,758   Removed herbsyner-finder==0.1.1 from https://files.pythonhosted.org/packages/cd/d9/77f7a5d1b2824bf94fe7ad5b7536fe9915aad09a94fdd6e60f3fd5c3c478/herbsyner_finder-0.1.1.tar.gz from build tracker '/tmp/pip-build-tracker-1q_sk3mx'
2026-03-13T12:27:13,764 Created temporary directory: /tmp/pip-unpack-dt6nzsgd
2026-03-13T12:27:13,765 Building wheels for collected packages: herbsyner-finder
2026-03-13T12:27:13,770   Created temporary directory: /tmp/pip-wheel-0j1jwwh5
2026-03-13T12:27:13,770   Building wheel for herbsyner-finder (setup.py): started
2026-03-13T12:27:13,771   Destination directory: /tmp/pip-wheel-0j1jwwh5
2026-03-13T12:27:13,772   Running command python setup.py bdist_wheel
2026-03-13T12:27:14,605   running bdist_wheel
2026-03-13T12:27:14,734   running build
2026-03-13T12:27:14,734   running build_py
2026-03-13T12:27:14,767   creating build/lib/cal_network_distance
2026-03-13T12:27:14,769   copying cal_network_distance/generate_objects.py -> build/lib/cal_network_distance
2026-03-13T12:27:14,772   copying cal_network_distance/disease.py -> build/lib/cal_network_distance
2026-03-13T12:27:14,774   copying cal_network_distance/construct_network.py -> build/lib/cal_network_distance
2026-03-13T12:27:14,776   copying cal_network_distance/herb_synergy_landscape.py -> build/lib/cal_network_distance
2026-03-13T12:27:14,779   copying cal_network_distance/__init__.py -> build/lib/cal_network_distance
2026-03-13T12:27:14,781   copying cal_network_distance/proximity_key.py -> build/lib/cal_network_distance
2026-03-13T12:27:14,783   copying cal_network_distance/herb_ingre_tar.py -> build/lib/cal_network_distance
2026-03-13T12:27:14,786   copying cal_network_distance/herb_herb_pairs.py -> build/lib/cal_network_distance
2026-03-13T12:27:14,788   copying cal_network_distance/data_loader.py -> build/lib/cal_network_distance
2026-03-13T12:27:14,790   copying cal_network_distance/herb_distance_generation.py -> build/lib/cal_network_distance
2026-03-13T12:27:14,793   creating build/lib/get_combination_community
2026-03-13T12:27:14,794   copying get_combination_community/community_detection.py -> build/lib/get_combination_community
2026-03-13T12:27:14,797   copying get_combination_community/__init__.py -> build/lib/get_combination_community
2026-03-13T12:27:14,827   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2026-03-13T12:27:14,828   !!

2026-03-13T12:27:14,829           ********************************************************************************
2026-03-13T12:27:14,829           Please avoid running ``setup.py`` directly.
2026-03-13T12:27:14,830           Instead, use pypa/build, pypa/installer or other
2026-03-13T12:27:14,830           standards-based tools.

2026-03-13T12:27:14,832           This deprecation is overdue, please update your project and remove deprecated
2026-03-13T12:27:14,832           calls to avoid build errors in the future.

2026-03-13T12:27:14,834           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2026-03-13T12:27:14,834           ********************************************************************************

2026-03-13T12:27:14,835   !!
2026-03-13T12:27:14,836     self.initialize_options()
2026-03-13T12:27:14,856   installing to build/bdist.linux-armv7l/wheel
2026-03-13T12:27:14,857   running install
2026-03-13T12:27:14,880   running install_lib
2026-03-13T12:27:14,907   creating build/bdist.linux-armv7l/wheel
2026-03-13T12:27:14,909   creating build/bdist.linux-armv7l/wheel/cal_network_distance
2026-03-13T12:27:14,910   copying build/lib/cal_network_distance/generate_objects.py -> build/bdist.linux-armv7l/wheel/./cal_network_distance
2026-03-13T12:27:14,912   copying build/lib/cal_network_distance/disease.py -> build/bdist.linux-armv7l/wheel/./cal_network_distance
2026-03-13T12:27:14,914   copying build/lib/cal_network_distance/construct_network.py -> build/bdist.linux-armv7l/wheel/./cal_network_distance
2026-03-13T12:27:14,916   copying build/lib/cal_network_distance/herb_synergy_landscape.py -> build/bdist.linux-armv7l/wheel/./cal_network_distance
2026-03-13T12:27:14,918   copying build/lib/cal_network_distance/__init__.py -> build/bdist.linux-armv7l/wheel/./cal_network_distance
2026-03-13T12:27:14,920   copying build/lib/cal_network_distance/proximity_key.py -> build/bdist.linux-armv7l/wheel/./cal_network_distance
2026-03-13T12:27:14,922   copying build/lib/cal_network_distance/herb_ingre_tar.py -> build/bdist.linux-armv7l/wheel/./cal_network_distance
2026-03-13T12:27:14,925   copying build/lib/cal_network_distance/herb_herb_pairs.py -> build/bdist.linux-armv7l/wheel/./cal_network_distance
2026-03-13T12:27:14,927   copying build/lib/cal_network_distance/data_loader.py -> build/bdist.linux-armv7l/wheel/./cal_network_distance
2026-03-13T12:27:14,928   copying build/lib/cal_network_distance/herb_distance_generation.py -> build/bdist.linux-armv7l/wheel/./cal_network_distance
2026-03-13T12:27:14,931   creating build/bdist.linux-armv7l/wheel/get_combination_community
2026-03-13T12:27:14,932   copying build/lib/get_combination_community/community_detection.py -> build/bdist.linux-armv7l/wheel/./get_combination_community
2026-03-13T12:27:14,934   copying build/lib/get_combination_community/__init__.py -> build/bdist.linux-armv7l/wheel/./get_combination_community
2026-03-13T12:27:14,936   running install_egg_info
2026-03-13T12:27:14,970   running egg_info
2026-03-13T12:27:14,997   writing herbSyner_Finder.egg-info/PKG-INFO
2026-03-13T12:27:15,000   writing dependency_links to herbSyner_Finder.egg-info/dependency_links.txt
2026-03-13T12:27:15,002   writing requirements to herbSyner_Finder.egg-info/requires.txt
2026-03-13T12:27:15,004   writing top-level names to herbSyner_Finder.egg-info/top_level.txt
2026-03-13T12:27:15,034   reading manifest file 'herbSyner_Finder.egg-info/SOURCES.txt'
2026-03-13T12:27:15,040   writing manifest file 'herbSyner_Finder.egg-info/SOURCES.txt'
2026-03-13T12:27:15,041   Copying herbSyner_Finder.egg-info to build/bdist.linux-armv7l/wheel/./herbSyner_Finder-0.1.1-py3.11.egg-info
2026-03-13T12:27:15,050   running install_scripts
2026-03-13T12:27:15,060   creating build/bdist.linux-armv7l/wheel/herbsyner_finder-0.1.1.dist-info/WHEEL
2026-03-13T12:27:15,062   creating '/tmp/pip-wheel-0j1jwwh5/herbsyner_finder-0.1.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2026-03-13T12:27:15,064   adding 'cal_network_distance/__init__.py'
2026-03-13T12:27:15,066   adding 'cal_network_distance/construct_network.py'
2026-03-13T12:27:15,068   adding 'cal_network_distance/data_loader.py'
2026-03-13T12:27:15,070   adding 'cal_network_distance/disease.py'
2026-03-13T12:27:15,071   adding 'cal_network_distance/generate_objects.py'
2026-03-13T12:27:15,073   adding 'cal_network_distance/herb_distance_generation.py'
2026-03-13T12:27:15,075   adding 'cal_network_distance/herb_herb_pairs.py'
2026-03-13T12:27:15,077   adding 'cal_network_distance/herb_ingre_tar.py'
2026-03-13T12:27:15,080   adding 'cal_network_distance/herb_synergy_landscape.py'
2026-03-13T12:27:15,082   adding 'cal_network_distance/proximity_key.py'
2026-03-13T12:27:15,083   adding 'get_combination_community/__init__.py'
2026-03-13T12:27:15,086   adding 'get_combination_community/community_detection.py'
2026-03-13T12:27:15,088   adding 'herbsyner_finder-0.1.1.dist-info/METADATA'
2026-03-13T12:27:15,089   adding 'herbsyner_finder-0.1.1.dist-info/WHEEL'
2026-03-13T12:27:15,090   adding 'herbsyner_finder-0.1.1.dist-info/top_level.txt'
2026-03-13T12:27:15,091   adding 'herbsyner_finder-0.1.1.dist-info/RECORD'
2026-03-13T12:27:15,092   removing build/bdist.linux-armv7l/wheel
2026-03-13T12:27:15,206   Building wheel for herbsyner-finder (setup.py): finished with status 'done'
2026-03-13T12:27:15,209   Created wheel for herbsyner-finder: filename=herbsyner_finder-0.1.1-py3-none-any.whl size=26978 sha256=30bb040cc312d0c7ab9869cd5785f5409ae391b166708c5ae8e33158a74aeefc
2026-03-13T12:27:15,210   Stored in directory: /tmp/pip-ephem-wheel-cache-8hihf3al/wheels/7b/83/22/d8143274195deceea95d6644a2faede8e09ca584ef1d09e027
2026-03-13T12:27:15,221 Successfully built herbsyner-finder
2026-03-13T12:27:15,225 Removed build tracker: '/tmp/pip-build-tracker-1q_sk3mx'