2026-03-17T08:04:50,308 Created temporary directory: /tmp/pip-ephem-wheel-cache-gdkoh17i 2026-03-17T08:04:50,310 Created temporary directory: /tmp/pip-build-tracker-klankh_m 2026-03-17T08:04:50,311 Initialized build tracking at /tmp/pip-build-tracker-klankh_m 2026-03-17T08:04:50,311 Created build tracker: /tmp/pip-build-tracker-klankh_m 2026-03-17T08:04:50,312 Entered build tracker: /tmp/pip-build-tracker-klankh_m 2026-03-17T08:04:50,313 Created temporary directory: /tmp/pip-wheel-g_xp6qer 2026-03-17T08:04:50,316 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-03-17T08:04:50,318 Created temporary directory: /tmp/pip-ephem-wheel-cache-9nz28gd9 2026-03-17T08:04:50,342 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-03-17T08:04:50,346 2 location(s) to search for versions of cryodata: 2026-03-17T08:04:50,346 * https://pypi.org/simple/cryodata/ 2026-03-17T08:04:50,346 * https://www.piwheels.org/simple/cryodata/ 2026-03-17T08:04:50,346 Fetching project page and analyzing links: https://pypi.org/simple/cryodata/ 2026-03-17T08:04:50,347 Getting page https://pypi.org/simple/cryodata/ 2026-03-17T08:04:50,349 Found index url https://pypi.org/simple 2026-03-17T08:04:50,598 Fetched page https://pypi.org/simple/cryodata/ as application/vnd.pypi.simple.v1+json 2026-03-17T08:04:50,608 Skipping link: No binaries permitted for cryodata: https://files.pythonhosted.org/packages/65/20/8f8afd4b0598f34f6663e73e39b29c13f9fdd5adbf786624c0349544042f/cryodata-0.1.0a4-py2.py3-none-any.whl (from https://pypi.org/simple/cryodata/) (requires-python:>=3.9.0) 2026-03-17T08:04:50,609 Found link https://files.pythonhosted.org/packages/15/8c/ef1a16f943f4a0185ba1c121609abc38b45ed4ecdf3bd840a76763938910/cryodata-0.1.0a4.tar.gz (from https://pypi.org/simple/cryodata/) (requires-python:>=3.9.0), version: 0.1.0a4 2026-03-17T08:04:50,610 Skipping link: No binaries permitted for cryodata: https://files.pythonhosted.org/packages/66/4b/140dfe3719ea4825c8283687b32a548e911f4a14feba2fa75230eb505e3c/cryodata-0.1.0a5-py2.py3-none-any.whl (from https://pypi.org/simple/cryodata/) (requires-python:>=3.9.0) 2026-03-17T08:04:50,611 Found link https://files.pythonhosted.org/packages/dc/66/54577fedeed1e26dc99147a908b51453474b40f328e46913ded2c225b867/cryodata-0.1.0a5.tar.gz (from https://pypi.org/simple/cryodata/) (requires-python:>=3.9.0), version: 0.1.0a5 2026-03-17T08:04:50,612 Skipping link: No binaries permitted for cryodata: https://files.pythonhosted.org/packages/57/5d/c0bbb37bcdcb8d20502e98cfc08530e92247d0c0b535db0398422d1cf76a/cryodata-0.1.0a6-py2.py3-none-any.whl (from https://pypi.org/simple/cryodata/) (requires-python:>=3.9.0) 2026-03-17T08:04:50,613 Found link https://files.pythonhosted.org/packages/6d/3e/368ed770574610a3501748e982633d4ce46d1d8ccabd155471ddce69165b/cryodata-0.1.0a6.tar.gz (from https://pypi.org/simple/cryodata/) (requires-python:>=3.9.0), version: 0.1.0a6 2026-03-17T08:04:50,614 Skipping link: No binaries permitted for cryodata: https://files.pythonhosted.org/packages/35/60/d382db2ffe921f52f9d927590952b1690eca3c64fc12cb4f93efcbabeaaf/cryodata-0.1.0b1-py2.py3-none-any.whl (from https://pypi.org/simple/cryodata/) (requires-python:>=3.9.0) 2026-03-17T08:04:50,615 Found link https://files.pythonhosted.org/packages/04/54/e528cdd0123e7e896f2ee54d6493794bcf2c60a7642fe5d889627329f983/cryodata-0.1.0b1.tar.gz (from 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2026-03-17T08:04:50,627 Skipping link: No binaries permitted for cryodata: https://files.pythonhosted.org/packages/70/e4/5db0036b77c7e7368860845a1d97a7439e4d49cf2bb63006372f8b243cb5/cryodata-0.1.0b9-py2.py3-none-any.whl (from https://pypi.org/simple/cryodata/) (requires-python:>=3.9.0) 2026-03-17T08:04:50,628 Found link https://files.pythonhosted.org/packages/2e/e6/cc20255f892fc9b5bc9cef7136f15b8e4d9135ed909714561b4ef98827ca/cryodata-0.1.0b9.tar.gz (from https://pypi.org/simple/cryodata/) (requires-python:>=3.9.0), version: 0.1.0b9 2026-03-17T08:04:50,629 Skipping link: No binaries permitted for cryodata: https://files.pythonhosted.org/packages/c1/36/8dd9df8da1a0e1999745a5ca1ef0532510a8a7aa09713cd06916bd0bd404/cryodata-0.1.0b10-py2.py3-none-any.whl (from https://pypi.org/simple/cryodata/) (requires-python:>=3.9.0) 2026-03-17T08:04:50,630 Found link https://files.pythonhosted.org/packages/0b/11/d8ad179a658f8c037ba543789e25710b8823587ce9098cde136bc6deabf0/cryodata-0.1.0b10.tar.gz (from 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https://files.pythonhosted.org/packages/e7/a0/2a281eff3b3ffa25ed4bf78c490cefdc41772fb33bc8c2f6e94eb60a1bc7/cryodata-0.1.1b1-py2.py3-none-any.whl (from https://pypi.org/simple/cryodata/) (requires-python:>=3.9.0) 2026-03-17T08:04:50,640 Found link https://files.pythonhosted.org/packages/d6/3a/66209cc7bb641b41affc25b8473bd024ecf82b72b5dde90dd5689aaa33ea/cryodata-0.1.1b1.tar.gz (from https://pypi.org/simple/cryodata/) (requires-python:>=3.9.0), version: 0.1.1b1 2026-03-17T08:04:50,641 Skipping link: No binaries permitted for cryodata: https://files.pythonhosted.org/packages/b0/55/e241cc9ce96c8298ca6706b70e74be4b4bc31b746b908aa57f6b3c8a3c66/cryodata-0.1.1b2-py2.py3-none-any.whl (from https://pypi.org/simple/cryodata/) (requires-python:>=3.9.0) 2026-03-17T08:04:50,642 Found link https://files.pythonhosted.org/packages/0a/d8/72e916123414785ce0d4cd7f1f138cd8174563bc53ab85dca8b41d4ba8e2/cryodata-0.1.1b2.tar.gz (from https://pypi.org/simple/cryodata/) (requires-python:>=3.9.0), version: 0.1.1b2 2026-03-17T08:04:50,643 Skipping link: No binaries permitted for cryodata: https://files.pythonhosted.org/packages/c0/22/dfacfa42e53508e1d83ef08b9da80b3143cf4d8697e1171fb03c22304131/cryodata-0.1.1b3-py2.py3-none-any.whl (from https://pypi.org/simple/cryodata/) (requires-python:>=3.9.0) 2026-03-17T08:04:50,644 Found link https://files.pythonhosted.org/packages/b8/40/9127e2c5e4e074cc07be348805044e04e7e4aa1d0ad1501e65c068e6c1d5/cryodata-0.1.1b3.tar.gz (from https://pypi.org/simple/cryodata/) (requires-python:>=3.9.0), version: 0.1.1b3 2026-03-17T08:04:50,645 Skipping link: No binaries permitted for cryodata: https://files.pythonhosted.org/packages/49/e0/0c4e41eefc26c982b9b3992790d412a746cd14546b0095aa540f82d6c817/cryodata-0.1.1b4-py2.py3-none-any.whl (from https://pypi.org/simple/cryodata/) (requires-python:>=3.9.0) 2026-03-17T08:04:50,645 Found link https://files.pythonhosted.org/packages/d9/ff/ee47ecf576243df9f60b2c4cb9ed9b91b97e3af91b04039de54f10f84883/cryodata-0.1.1b4.tar.gz (from 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https://www.piwheels.org/simple 2026-03-17T08:04:50,846 Fetched page https://www.piwheels.org/simple/cryodata/ as text/html 2026-03-17T08:04:50,854 Skipping link: No binaries permitted for cryodata: https://www.piwheels.org/simple/cryodata/cryodata-0.1.1b6-py3-none-any.whl#sha256=b598b903ec0b59a7f9aed8a3298b1e1df0d24fa03c2aba62c75405935568ced8 (from https://www.piwheels.org/simple/cryodata/) (requires-python:>=3.9.0) 2026-03-17T08:04:50,855 Skipping link: No binaries permitted for cryodata: https://archive1.piwheels.org/simple/cryodata/cryodata-0.1.1b5-py3-none-any.whl#sha256=ae669a07793f9041bd9528e52a20c6c5ebbfb6e4dcfae946d709147a82e442b7 (from https://www.piwheels.org/simple/cryodata/) (requires-python:>=3.9.0) 2026-03-17T08:04:50,855 Skipping link: No binaries permitted for cryodata: https://archive1.piwheels.org/simple/cryodata/cryodata-0.1.1b4-py3-none-any.whl#sha256=e876ec3ebe284a1084a744c868eae73d4827421072d7669dd5c46c0ca7456640 (from https://www.piwheels.org/simple/cryodata/) (requires-python:>=3.9.0) 2026-03-17T08:04:50,856 Skipping link: No binaries permitted for cryodata: https://archive1.piwheels.org/simple/cryodata/cryodata-0.1.1b3-py3-none-any.whl#sha256=52ec68250ec6ea35271a255b2a3b0382911642d5f403af278c74da3f413c9305 (from https://www.piwheels.org/simple/cryodata/) (requires-python:>=3.9.0) 2026-03-17T08:04:50,857 Skipping link: No binaries permitted for cryodata: https://archive1.piwheels.org/simple/cryodata/cryodata-0.1.1b2-py3-none-any.whl#sha256=eee0d79f0648ed63bf36c1d8fd2f65566f6003f10113946ed70c5ea59aa74649 (from https://www.piwheels.org/simple/cryodata/) (requires-python:>=3.9.0) 2026-03-17T08:04:50,858 Skipping link: No binaries permitted for cryodata: https://archive1.piwheels.org/simple/cryodata/cryodata-0.1.1b1-py3-none-any.whl#sha256=6936671eebb2e43a6aa7a893c4035befa866ce8a3d294468e95536aa1ab6362d (from https://www.piwheels.org/simple/cryodata/) (requires-python:>=3.9.0) 2026-03-17T08:04:50,858 Skipping link: No binaries permitted for cryodata: https://archive1.piwheels.org/simple/cryodata/cryodata-0.1.1b0-py3-none-any.whl#sha256=564ae1d62e4723a46eecfffc28af6628913845287885bc2532ccabffc25b6642 (from https://www.piwheels.org/simple/cryodata/) (requires-python:>=3.9.0) 2026-03-17T08:04:50,859 Skipping link: No binaries permitted for cryodata: https://archive1.piwheels.org/simple/cryodata/cryodata-0.1.0b15-py3-none-any.whl#sha256=5c6357dc234aab877cc87a297e756981438cd48563af65f6ff4c680522b43ec2 (from https://www.piwheels.org/simple/cryodata/) (requires-python:>=3.9.0) 2026-03-17T08:04:50,859 Skipping link: No binaries permitted for cryodata: https://archive1.piwheels.org/simple/cryodata/cryodata-0.1.0b13-py3-none-any.whl#sha256=9eaa1e797ae051ec8f9c2c39c9b9557c26677e5e4c5ed2048f150b4bc3a2e6d2 (from https://www.piwheels.org/simple/cryodata/) (requires-python:>=3.9.0) 2026-03-17T08:04:50,860 Skipping link: No binaries permitted for cryodata: 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https://archive1.piwheels.org/simple/cryodata/cryodata-0.1.0b6-py3-none-any.whl#sha256=a9395322e5a580e21c726da17f5555e15288e52e556a440f6ac3fb7bf77f5d46 (from https://www.piwheels.org/simple/cryodata/) (requires-python:>=3.9.0) 2026-03-17T08:04:50,864 Skipping link: No binaries permitted for cryodata: https://archive1.piwheels.org/simple/cryodata/cryodata-0.1.0b5-py3-none-any.whl#sha256=d75701f4a9fd67e69e670680c84a54dac6438381b958f0be84a63485e5ab309a (from https://www.piwheels.org/simple/cryodata/) (requires-python:>=3.9.0) 2026-03-17T08:04:50,865 Skipping link: No binaries permitted for cryodata: https://archive1.piwheels.org/simple/cryodata/cryodata-0.1.0b4-py3-none-any.whl#sha256=0c05f9d7bb65686e8677bf1abf5170af7234e76d0dba647f917690572cd37d41 (from https://www.piwheels.org/simple/cryodata/) (requires-python:>=3.9.0) 2026-03-17T08:04:50,866 Skipping link: No binaries permitted for cryodata: https://archive1.piwheels.org/simple/cryodata/cryodata-0.1.0b3-py3-none-any.whl#sha256=958f97221dbf343e1b48de8daea5695fb0c156a8e90571c6253d7a50274ccca6 (from https://www.piwheels.org/simple/cryodata/) (requires-python:>=3.9.0) 2026-03-17T08:04:50,866 Skipping link: No binaries permitted for cryodata: https://archive1.piwheels.org/simple/cryodata/cryodata-0.1.0b2-py3-none-any.whl#sha256=d2d9d5fc7fe8e636adebcf9e4fc7986ee8f7021c9a01f363d437aa9fad0fda85 (from https://www.piwheels.org/simple/cryodata/) (requires-python:>=3.9.0) 2026-03-17T08:04:50,867 Skipping link: No binaries permitted for cryodata: https://archive1.piwheels.org/simple/cryodata/cryodata-0.1.0b1-py3-none-any.whl#sha256=71aac477447efb83a62edab5b996b3c09fea80c21eefa306c2cc86b6fc1023e0 (from https://www.piwheels.org/simple/cryodata/) (requires-python:>=3.9.0) 2026-03-17T08:04:50,867 Skipping link: No binaries permitted for cryodata: https://archive1.piwheels.org/simple/cryodata/cryodata-0.1.0a6-py3-none-any.whl#sha256=634aff2fe8d6c7dc9bb946aa4f444d5a5e2a1121ca1c8c2cb4f070aca31d2030 (from https://www.piwheels.org/simple/cryodata/) (requires-python:>=3.9.0) 2026-03-17T08:04:50,868 Skipping link: No binaries permitted for cryodata: https://archive1.piwheels.org/simple/cryodata/cryodata-0.1.0a5-py3-none-any.whl#sha256=bb381e9cc41d734a42e7a60d661a69f098d0afc4f70e96c027f09a055c244525 (from https://www.piwheels.org/simple/cryodata/) (requires-python:>=3.9.0) 2026-03-17T08:04:50,868 Skipping link: No binaries permitted for cryodata: https://archive1.piwheels.org/simple/cryodata/cryodata-0.1.0a4-py3-none-any.whl#sha256=4c511b83b7ae141a803fb0f2988214da34d814afec3bcc7fd33b806d1f1ccb50 (from https://www.piwheels.org/simple/cryodata/) (requires-python:>=3.9.0) 2026-03-17T08:04:50,869 Skipping link: not a file: https://www.piwheels.org/simple/cryodata/ 2026-03-17T08:04:50,870 Skipping link: not a file: https://pypi.org/simple/cryodata/ 2026-03-17T08:04:50,894 Given no hashes to check 1 links for project 'cryodata': discarding no candidates 2026-03-17T08:04:50,913 Collecting cryodata==0.1.2b1 2026-03-17T08:04:50,916 Created temporary directory: /tmp/pip-unpack-tqy2_he8 2026-03-17T08:04:51,047 Downloading cryodata-0.1.2b1.tar.gz (76 kB) 2026-03-17T08:04:51,211 Added cryodata==0.1.2b1 from https://files.pythonhosted.org/packages/c9/67/b7c3ca085632f695739d6a07f6dc7d150e42d3c181532d7dd73d18c21ea2/cryodata-0.1.2b1.tar.gz to build tracker '/tmp/pip-build-tracker-klankh_m' 2026-03-17T08:04:51,215 Created temporary directory: /tmp/pip-build-env-29vj7p7i 2026-03-17T08:04:51,220 Installing build dependencies: started 2026-03-17T08:04:51,222 Running command pip subprocess to install build dependencies 2026-03-17T08:04:52,384 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-03-17T08:04:52,966 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-03-17T08:04:52,989 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-03-17T08:04:54,703 Collecting setuptools>=69 2026-03-17T08:04:54,801 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-03-17T08:04:55,069 Collecting wheel 2026-03-17T08:04:55,090 Using cached https://www.piwheels.org/simple/wheel/wheel-0.46.3-py3-none-any.whl (30 kB) 2026-03-17T08:04:55,281 Collecting packaging>=24.0 2026-03-17T08:04:55,297 Using cached https://www.piwheels.org/simple/packaging/packaging-26.0-py3-none-any.whl (74 kB) 2026-03-17T08:04:58,299 Installing collected packages: setuptools, packaging, wheel 2026-03-17T08:05:01,934 Creating /tmp/pip-build-env-29vj7p7i/overlay/local/bin 2026-03-17T08:05:01,936 changing mode of /tmp/pip-build-env-29vj7p7i/overlay/local/bin/wheel to 755 2026-03-17T08:05:01,956 Successfully installed packaging-26.0 setuptools-82.0.1 wheel-0.46.3 2026-03-17T08:05:02,235 Installing build dependencies: finished with status 'done' 2026-03-17T08:05:02,242 Getting requirements to build wheel: started 2026-03-17T08:05:02,243 Running command Getting requirements to build wheel 2026-03-17T08:05:02,836 /tmp/pip-build-env-29vj7p7i/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:332: InformationOnly: Normalizing '0.1.2b01' to '0.1.2b1' 2026-03-17T08:05:02,836 self.metadata.version = self._normalize_version(self.metadata.version) 2026-03-17T08:05:02,851 /tmp/pip-build-env-29vj7p7i/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-03-17T08:05:02,851 !! 2026-03-17T08:05:02,852 ******************************************************************************** 2026-03-17T08:05:02,853 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-03-17T08:05:02,854 License :: OSI Approved :: MIT License 2026-03-17T08:05:02,855 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-17T08:05:02,856 ******************************************************************************** 2026-03-17T08:05:02,857 !! 2026-03-17T08:05:02,858 self._finalize_license_expression() 2026-03-17T08:05:02,875 running egg_info 2026-03-17T08:05:02,881 writing cryodata.egg-info/PKG-INFO 2026-03-17T08:05:02,886 writing dependency_links to cryodata.egg-info/dependency_links.txt 2026-03-17T08:05:02,888 writing requirements to cryodata.egg-info/requires.txt 2026-03-17T08:05:02,889 writing top-level names to cryodata.egg-info/top_level.txt 2026-03-17T08:05:02,924 reading manifest file 'cryodata.egg-info/SOURCES.txt' 2026-03-17T08:05:02,932 writing manifest file 'cryodata.egg-info/SOURCES.txt' 2026-03-17T08:05:03,024 Getting requirements to build wheel: finished with status 'done' 2026-03-17T08:05:03,027 Created temporary directory: /tmp/pip-modern-metadata-uotkdl4t 2026-03-17T08:05:03,030 Preparing metadata (pyproject.toml): started 2026-03-17T08:05:03,031 Running command Preparing metadata (pyproject.toml) 2026-03-17T08:05:03,565 /tmp/pip-build-env-29vj7p7i/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:332: InformationOnly: Normalizing '0.1.2b01' to '0.1.2b1' 2026-03-17T08:05:03,565 self.metadata.version = self._normalize_version(self.metadata.version) 2026-03-17T08:05:03,579 /tmp/pip-build-env-29vj7p7i/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-03-17T08:05:03,580 !! 2026-03-17T08:05:03,581 ******************************************************************************** 2026-03-17T08:05:03,581 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-03-17T08:05:03,583 License :: OSI Approved :: MIT License 2026-03-17T08:05:03,584 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-17T08:05:03,584 ******************************************************************************** 2026-03-17T08:05:03,586 !! 2026-03-17T08:05:03,586 self._finalize_license_expression() 2026-03-17T08:05:03,606 running dist_info 2026-03-17T08:05:03,617 creating /tmp/pip-modern-metadata-uotkdl4t/cryodata.egg-info 2026-03-17T08:05:03,618 writing /tmp/pip-modern-metadata-uotkdl4t/cryodata.egg-info/PKG-INFO 2026-03-17T08:05:03,623 writing dependency_links to /tmp/pip-modern-metadata-uotkdl4t/cryodata.egg-info/dependency_links.txt 2026-03-17T08:05:03,625 writing requirements to /tmp/pip-modern-metadata-uotkdl4t/cryodata.egg-info/requires.txt 2026-03-17T08:05:03,626 writing top-level names to /tmp/pip-modern-metadata-uotkdl4t/cryodata.egg-info/top_level.txt 2026-03-17T08:05:03,628 writing manifest file '/tmp/pip-modern-metadata-uotkdl4t/cryodata.egg-info/SOURCES.txt' 2026-03-17T08:05:03,658 reading manifest file '/tmp/pip-modern-metadata-uotkdl4t/cryodata.egg-info/SOURCES.txt' 2026-03-17T08:05:03,663 writing manifest file '/tmp/pip-modern-metadata-uotkdl4t/cryodata.egg-info/SOURCES.txt' 2026-03-17T08:05:03,664 creating '/tmp/pip-modern-metadata-uotkdl4t/cryodata-0.1.2b1.dist-info' 2026-03-17T08:05:03,788 Preparing metadata (pyproject.toml): finished with status 'done' 2026-03-17T08:05:03,795 Source in /tmp/pip-wheel-g_xp6qer/cryodata_13029dba29a148d1b1946d8873f20c5e has version 0.1.2b1, which satisfies requirement cryodata==0.1.2b1 from https://files.pythonhosted.org/packages/c9/67/b7c3ca085632f695739d6a07f6dc7d150e42d3c181532d7dd73d18c21ea2/cryodata-0.1.2b1.tar.gz 2026-03-17T08:05:03,795 Removed cryodata==0.1.2b1 from https://files.pythonhosted.org/packages/c9/67/b7c3ca085632f695739d6a07f6dc7d150e42d3c181532d7dd73d18c21ea2/cryodata-0.1.2b1.tar.gz from build tracker '/tmp/pip-build-tracker-klankh_m' 2026-03-17T08:05:03,803 Created temporary directory: /tmp/pip-unpack-9e9wniuw 2026-03-17T08:05:03,804 Building wheels for collected packages: cryodata 2026-03-17T08:05:03,808 Created temporary directory: /tmp/pip-wheel-82or3gso 2026-03-17T08:05:03,808 Destination directory: /tmp/pip-wheel-82or3gso 2026-03-17T08:05:03,811 Building wheel for cryodata (pyproject.toml): started 2026-03-17T08:05:03,812 Running command Building wheel for cryodata (pyproject.toml) 2026-03-17T08:05:04,348 /tmp/pip-build-env-29vj7p7i/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:332: InformationOnly: Normalizing '0.1.2b01' to '0.1.2b1' 2026-03-17T08:05:04,348 self.metadata.version = self._normalize_version(self.metadata.version) 2026-03-17T08:05:04,362 /tmp/pip-build-env-29vj7p7i/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-03-17T08:05:04,363 !! 2026-03-17T08:05:04,364 ******************************************************************************** 2026-03-17T08:05:04,365 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-03-17T08:05:04,366 License :: OSI Approved :: MIT License 2026-03-17T08:05:04,367 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-17T08:05:04,368 ******************************************************************************** 2026-03-17T08:05:04,369 !! 2026-03-17T08:05:04,370 self._finalize_license_expression() 2026-03-17T08:05:04,390 running bdist_wheel 2026-03-17T08:05:04,418 running build 2026-03-17T08:05:04,418 running build_py 2026-03-17T08:05:04,427 creating build/lib/cryodata 2026-03-17T08:05:04,429 copying cryodata/dataset_resample.py -> build/lib/cryodata 2026-03-17T08:05:04,434 copying cryodata/cryoemDataset.py -> build/lib/cryodata 2026-03-17T08:05:04,437 copying cryodata/__init__.py -> build/lib/cryodata 2026-03-17T08:05:04,440 creating build/lib/cryodata/cs_star_translate 2026-03-17T08:05:04,441 copying cryodata/cs_star_translate/generate_cs_file.py -> build/lib/cryodata/cs_star_translate 2026-03-17T08:05:04,443 copying cryodata/cs_star_translate/utils.py -> build/lib/cryodata/cs_star_translate 2026-03-17T08:05:04,445 copying cryodata/cs_star_translate/__init__.py -> build/lib/cryodata/cs_star_translate 2026-03-17T08:05:04,447 copying cryodata/cs_star_translate/cs2star.py -> build/lib/cryodata/cs_star_translate 2026-03-17T08:05:04,449 creating build/lib/cryodata/data_preprocess 2026-03-17T08:05:04,450 copying cryodata/data_preprocess/mrc_preprocess.py -> build/lib/cryodata/data_preprocess 2026-03-17T08:05:04,453 copying cryodata/data_preprocess/fft.py -> build/lib/cryodata/data_preprocess 2026-03-17T08:05:04,455 copying cryodata/data_preprocess/mrc.py -> build/lib/cryodata/data_preprocess 2026-03-17T08:05:04,458 copying cryodata/data_preprocess/lmdb_preprocess.py -> build/lib/cryodata/data_preprocess 2026-03-17T08:05:04,460 copying cryodata/data_preprocess/__init__.py -> build/lib/cryodata/data_preprocess 2026-03-17T08:05:04,463 creating build/lib/cryodata/cs_star_translate/pyem 2026-03-17T08:05:04,464 copying cryodata/cs_star_translate/pyem/plot.py -> build/lib/cryodata/cs_star_translate/pyem 2026-03-17T08:05:04,466 copying cryodata/cs_star_translate/pyem/mrc.py -> build/lib/cryodata/cs_star_translate/pyem 2026-03-17T08:05:04,468 copying cryodata/cs_star_translate/pyem/__init__.py -> build/lib/cryodata/cs_star_translate/pyem 2026-03-17T08:05:04,470 copying cryodata/cs_star_translate/pyem/ctf.py -> build/lib/cryodata/cs_star_translate/pyem 2026-03-17T08:05:04,472 copying cryodata/cs_star_translate/pyem/star.py -> build/lib/cryodata/cs_star_translate/pyem 2026-03-17T08:05:04,476 creating build/lib/cryodata/cs_star_translate/pyem/algo 2026-03-17T08:05:04,477 copying cryodata/cs_star_translate/pyem/algo/algo.py -> build/lib/cryodata/cs_star_translate/pyem/algo 2026-03-17T08:05:04,479 copying cryodata/cs_star_translate/pyem/algo/algo_numba.py -> build/lib/cryodata/cs_star_translate/pyem/algo 2026-03-17T08:05:04,481 copying cryodata/cs_star_translate/pyem/algo/__init__.py -> build/lib/cryodata/cs_star_translate/pyem/algo 2026-03-17T08:05:04,484 creating build/lib/cryodata/cs_star_translate/pyem/metadata 2026-03-17T08:05:04,485 copying cryodata/cs_star_translate/pyem/metadata/cryosparc0.py -> build/lib/cryodata/cs_star_translate/pyem/metadata 2026-03-17T08:05:04,487 copying cryodata/cs_star_translate/pyem/metadata/__init__.py -> build/lib/cryodata/cs_star_translate/pyem/metadata 2026-03-17T08:05:04,489 copying cryodata/cs_star_translate/pyem/metadata/cryosparc2.py -> build/lib/cryodata/cs_star_translate/pyem/metadata 2026-03-17T08:05:04,491 copying cryodata/cs_star_translate/pyem/metadata/cistem.py -> build/lib/cryodata/cs_star_translate/pyem/metadata 2026-03-17T08:05:04,494 creating build/lib/cryodata/cs_star_translate/pyem/util 2026-03-17T08:05:04,495 copying cryodata/cs_star_translate/pyem/util/__init__.py -> build/lib/cryodata/cs_star_translate/pyem/util 2026-03-17T08:05:04,497 copying cryodata/cs_star_translate/pyem/util/util.py -> build/lib/cryodata/cs_star_translate/pyem/util 2026-03-17T08:05:04,500 creating build/lib/cryodata/cs_star_translate/pyem/geom 2026-03-17T08:05:04,501 copying cryodata/cs_star_translate/pyem/geom/quat_numba.py -> build/lib/cryodata/cs_star_translate/pyem/geom 2026-03-17T08:05:04,504 copying cryodata/cs_star_translate/pyem/geom/geom_numba.py -> build/lib/cryodata/cs_star_translate/pyem/geom 2026-03-17T08:05:04,506 copying cryodata/cs_star_translate/pyem/geom/convert.py -> build/lib/cryodata/cs_star_translate/pyem/geom 2026-03-17T08:05:04,508 copying cryodata/cs_star_translate/pyem/geom/__init__.py -> build/lib/cryodata/cs_star_translate/pyem/geom 2026-03-17T08:05:04,510 copying cryodata/cs_star_translate/pyem/geom/convert_numba.py -> build/lib/cryodata/cs_star_translate/pyem/geom 2026-03-17T08:05:04,512 copying cryodata/cs_star_translate/pyem/geom/quat.py -> build/lib/cryodata/cs_star_translate/pyem/geom 2026-03-17T08:05:04,514 copying cryodata/cs_star_translate/pyem/geom/geom.py -> build/lib/cryodata/cs_star_translate/pyem/geom 2026-03-17T08:05:04,517 creating build/lib/cryodata/cs_star_translate/pyem/vop 2026-03-17T08:05:04,518 copying cryodata/cs_star_translate/pyem/vop/vop_numba.py -> build/lib/cryodata/cs_star_translate/pyem/vop 2026-03-17T08:05:04,520 copying cryodata/cs_star_translate/pyem/vop/__init__.py -> build/lib/cryodata/cs_star_translate/pyem/vop 2026-03-17T08:05:04,522 copying cryodata/cs_star_translate/pyem/vop/binary.py -> build/lib/cryodata/cs_star_translate/pyem/vop 2026-03-17T08:05:04,524 copying cryodata/cs_star_translate/pyem/vop/vop.py -> build/lib/cryodata/cs_star_translate/pyem/vop 2026-03-17T08:05:04,526 running egg_info 2026-03-17T08:05:04,536 writing cryodata.egg-info/PKG-INFO 2026-03-17T08:05:04,541 writing dependency_links to cryodata.egg-info/dependency_links.txt 2026-03-17T08:05:04,544 writing requirements to cryodata.egg-info/requires.txt 2026-03-17T08:05:04,545 writing top-level names to cryodata.egg-info/top_level.txt 2026-03-17T08:05:04,563 reading manifest file 'cryodata.egg-info/SOURCES.txt' 2026-03-17T08:05:04,570 writing manifest file 'cryodata.egg-info/SOURCES.txt' 2026-03-17T08:05:04,592 installing to build/bdist.linux-armv7l/wheel 2026-03-17T08:05:04,592 running install 2026-03-17T08:05:04,616 running install_lib 2026-03-17T08:05:04,627 creating build/bdist.linux-armv7l/wheel 2026-03-17T08:05:04,629 creating build/bdist.linux-armv7l/wheel/cryodata 2026-03-17T08:05:04,631 creating build/bdist.linux-armv7l/wheel/cryodata/cs_star_translate 2026-03-17T08:05:04,632 copying build/lib/cryodata/cs_star_translate/generate_cs_file.py -> build/bdist.linux-armv7l/wheel/./cryodata/cs_star_translate 2026-03-17T08:05:04,634 copying build/lib/cryodata/cs_star_translate/utils.py -> build/bdist.linux-armv7l/wheel/./cryodata/cs_star_translate 2026-03-17T08:05:04,636 copying build/lib/cryodata/cs_star_translate/__init__.py -> build/bdist.linux-armv7l/wheel/./cryodata/cs_star_translate 2026-03-17T08:05:04,638 copying build/lib/cryodata/cs_star_translate/cs2star.py -> build/bdist.linux-armv7l/wheel/./cryodata/cs_star_translate 2026-03-17T08:05:04,640 creating build/bdist.linux-armv7l/wheel/cryodata/cs_star_translate/pyem 2026-03-17T08:05:04,642 creating build/bdist.linux-armv7l/wheel/cryodata/cs_star_translate/pyem/algo 2026-03-17T08:05:04,643 copying build/lib/cryodata/cs_star_translate/pyem/algo/algo.py -> build/bdist.linux-armv7l/wheel/./cryodata/cs_star_translate/pyem/algo 2026-03-17T08:05:04,645 copying build/lib/cryodata/cs_star_translate/pyem/algo/algo_numba.py -> build/bdist.linux-armv7l/wheel/./cryodata/cs_star_translate/pyem/algo 2026-03-17T08:05:04,647 copying build/lib/cryodata/cs_star_translate/pyem/algo/__init__.py -> build/bdist.linux-armv7l/wheel/./cryodata/cs_star_translate/pyem/algo 2026-03-17T08:05:04,650 creating build/bdist.linux-armv7l/wheel/cryodata/cs_star_translate/pyem/metadata 2026-03-17T08:05:04,651 copying build/lib/cryodata/cs_star_translate/pyem/metadata/cryosparc0.py -> build/bdist.linux-armv7l/wheel/./cryodata/cs_star_translate/pyem/metadata 2026-03-17T08:05:04,654 copying build/lib/cryodata/cs_star_translate/pyem/metadata/__init__.py -> build/bdist.linux-armv7l/wheel/./cryodata/cs_star_translate/pyem/metadata 2026-03-17T08:05:04,655 copying build/lib/cryodata/cs_star_translate/pyem/metadata/cryosparc2.py -> build/bdist.linux-armv7l/wheel/./cryodata/cs_star_translate/pyem/metadata 2026-03-17T08:05:04,658 copying build/lib/cryodata/cs_star_translate/pyem/metadata/cistem.py -> build/bdist.linux-armv7l/wheel/./cryodata/cs_star_translate/pyem/metadata 2026-03-17T08:05:04,661 creating build/bdist.linux-armv7l/wheel/cryodata/cs_star_translate/pyem/util 2026-03-17T08:05:04,662 copying build/lib/cryodata/cs_star_translate/pyem/util/__init__.py -> build/bdist.linux-armv7l/wheel/./cryodata/cs_star_translate/pyem/util 2026-03-17T08:05:04,664 copying build/lib/cryodata/cs_star_translate/pyem/util/util.py -> build/bdist.linux-armv7l/wheel/./cryodata/cs_star_translate/pyem/util 2026-03-17T08:05:04,666 copying build/lib/cryodata/cs_star_translate/pyem/plot.py -> build/bdist.linux-armv7l/wheel/./cryodata/cs_star_translate/pyem 2026-03-17T08:05:04,669 copying build/lib/cryodata/cs_star_translate/pyem/mrc.py -> build/bdist.linux-armv7l/wheel/./cryodata/cs_star_translate/pyem 2026-03-17T08:05:04,672 creating build/bdist.linux-armv7l/wheel/cryodata/cs_star_translate/pyem/geom 2026-03-17T08:05:04,673 copying build/lib/cryodata/cs_star_translate/pyem/geom/quat_numba.py -> build/bdist.linux-armv7l/wheel/./cryodata/cs_star_translate/pyem/geom 2026-03-17T08:05:04,676 copying build/lib/cryodata/cs_star_translate/pyem/geom/geom_numba.py -> build/bdist.linux-armv7l/wheel/./cryodata/cs_star_translate/pyem/geom 2026-03-17T08:05:04,678 copying build/lib/cryodata/cs_star_translate/pyem/geom/convert.py -> build/bdist.linux-armv7l/wheel/./cryodata/cs_star_translate/pyem/geom 2026-03-17T08:05:04,680 copying build/lib/cryodata/cs_star_translate/pyem/geom/__init__.py -> build/bdist.linux-armv7l/wheel/./cryodata/cs_star_translate/pyem/geom 2026-03-17T08:05:04,682 copying build/lib/cryodata/cs_star_translate/pyem/geom/convert_numba.py -> build/bdist.linux-armv7l/wheel/./cryodata/cs_star_translate/pyem/geom 2026-03-17T08:05:04,684 copying build/lib/cryodata/cs_star_translate/pyem/geom/quat.py -> build/bdist.linux-armv7l/wheel/./cryodata/cs_star_translate/pyem/geom 2026-03-17T08:05:04,686 copying build/lib/cryodata/cs_star_translate/pyem/geom/geom.py -> build/bdist.linux-armv7l/wheel/./cryodata/cs_star_translate/pyem/geom 2026-03-17T08:05:04,688 creating build/bdist.linux-armv7l/wheel/cryodata/cs_star_translate/pyem/vop 2026-03-17T08:05:04,689 copying build/lib/cryodata/cs_star_translate/pyem/vop/vop_numba.py -> build/bdist.linux-armv7l/wheel/./cryodata/cs_star_translate/pyem/vop 2026-03-17T08:05:04,691 copying build/lib/cryodata/cs_star_translate/pyem/vop/__init__.py -> build/bdist.linux-armv7l/wheel/./cryodata/cs_star_translate/pyem/vop 2026-03-17T08:05:04,693 copying build/lib/cryodata/cs_star_translate/pyem/vop/binary.py -> build/bdist.linux-armv7l/wheel/./cryodata/cs_star_translate/pyem/vop 2026-03-17T08:05:04,695 copying build/lib/cryodata/cs_star_translate/pyem/vop/vop.py -> build/bdist.linux-armv7l/wheel/./cryodata/cs_star_translate/pyem/vop 2026-03-17T08:05:04,698 copying build/lib/cryodata/cs_star_translate/pyem/__init__.py -> build/bdist.linux-armv7l/wheel/./cryodata/cs_star_translate/pyem 2026-03-17T08:05:04,700 copying build/lib/cryodata/cs_star_translate/pyem/ctf.py -> build/bdist.linux-armv7l/wheel/./cryodata/cs_star_translate/pyem 2026-03-17T08:05:04,702 copying build/lib/cryodata/cs_star_translate/pyem/star.py -> build/bdist.linux-armv7l/wheel/./cryodata/cs_star_translate/pyem 2026-03-17T08:05:04,705 copying build/lib/cryodata/dataset_resample.py -> build/bdist.linux-armv7l/wheel/./cryodata 2026-03-17T08:05:04,708 copying build/lib/cryodata/cryoemDataset.py -> build/bdist.linux-armv7l/wheel/./cryodata 2026-03-17T08:05:04,711 copying build/lib/cryodata/__init__.py -> build/bdist.linux-armv7l/wheel/./cryodata 2026-03-17T08:05:04,714 creating build/bdist.linux-armv7l/wheel/cryodata/data_preprocess 2026-03-17T08:05:04,715 copying build/lib/cryodata/data_preprocess/mrc_preprocess.py -> build/bdist.linux-armv7l/wheel/./cryodata/data_preprocess 2026-03-17T08:05:04,717 copying build/lib/cryodata/data_preprocess/fft.py -> build/bdist.linux-armv7l/wheel/./cryodata/data_preprocess 2026-03-17T08:05:04,719 copying build/lib/cryodata/data_preprocess/mrc.py -> build/bdist.linux-armv7l/wheel/./cryodata/data_preprocess 2026-03-17T08:05:04,722 copying build/lib/cryodata/data_preprocess/lmdb_preprocess.py -> build/bdist.linux-armv7l/wheel/./cryodata/data_preprocess 2026-03-17T08:05:04,725 copying build/lib/cryodata/data_preprocess/__init__.py -> build/bdist.linux-armv7l/wheel/./cryodata/data_preprocess 2026-03-17T08:05:04,726 running install_egg_info 2026-03-17T08:05:04,739 Copying cryodata.egg-info to build/bdist.linux-armv7l/wheel/./cryodata-0.1.2b1-py3.11.egg-info 2026-03-17T08:05:04,750 running install_scripts 2026-03-17T08:05:04,759 creating build/bdist.linux-armv7l/wheel/cryodata-0.1.2b1.dist-info/WHEEL 2026-03-17T08:05:04,762 creating '/tmp/pip-wheel-82or3gso/.tmp-min3xo87/cryodata-0.1.2b1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-03-17T08:05:04,764 adding 'cryodata/__init__.py' 2026-03-17T08:05:04,770 adding 'cryodata/cryoemDataset.py' 2026-03-17T08:05:04,774 adding 'cryodata/dataset_resample.py' 2026-03-17T08:05:04,775 adding 'cryodata/cs_star_translate/__init__.py' 2026-03-17T08:05:04,777 adding 'cryodata/cs_star_translate/cs2star.py' 2026-03-17T08:05:04,778 adding 'cryodata/cs_star_translate/generate_cs_file.py' 2026-03-17T08:05:04,779 adding 'cryodata/cs_star_translate/utils.py' 2026-03-17T08:05:04,781 adding 'cryodata/cs_star_translate/pyem/__init__.py' 2026-03-17T08:05:04,782 adding 'cryodata/cs_star_translate/pyem/ctf.py' 2026-03-17T08:05:04,785 adding 'cryodata/cs_star_translate/pyem/mrc.py' 2026-03-17T08:05:04,787 adding 'cryodata/cs_star_translate/pyem/plot.py' 2026-03-17T08:05:04,791 adding 'cryodata/cs_star_translate/pyem/star.py' 2026-03-17T08:05:04,792 adding 'cryodata/cs_star_translate/pyem/algo/__init__.py' 2026-03-17T08:05:04,794 adding 'cryodata/cs_star_translate/pyem/algo/algo.py' 2026-03-17T08:05:04,796 adding 'cryodata/cs_star_translate/pyem/algo/algo_numba.py' 2026-03-17T08:05:04,798 adding 'cryodata/cs_star_translate/pyem/geom/__init__.py' 2026-03-17T08:05:04,800 adding 'cryodata/cs_star_translate/pyem/geom/convert.py' 2026-03-17T08:05:04,802 adding 'cryodata/cs_star_translate/pyem/geom/convert_numba.py' 2026-03-17T08:05:04,804 adding 'cryodata/cs_star_translate/pyem/geom/geom.py' 2026-03-17T08:05:04,806 adding 'cryodata/cs_star_translate/pyem/geom/geom_numba.py' 2026-03-17T08:05:04,807 adding 'cryodata/cs_star_translate/pyem/geom/quat.py' 2026-03-17T08:05:04,810 adding 'cryodata/cs_star_translate/pyem/geom/quat_numba.py' 2026-03-17T08:05:04,812 adding 'cryodata/cs_star_translate/pyem/metadata/__init__.py' 2026-03-17T08:05:04,814 adding 'cryodata/cs_star_translate/pyem/metadata/cistem.py' 2026-03-17T08:05:04,816 adding 'cryodata/cs_star_translate/pyem/metadata/cryosparc0.py' 2026-03-17T08:05:04,818 adding 'cryodata/cs_star_translate/pyem/metadata/cryosparc2.py' 2026-03-17T08:05:04,820 adding 'cryodata/cs_star_translate/pyem/util/__init__.py' 2026-03-17T08:05:04,822 adding 'cryodata/cs_star_translate/pyem/util/util.py' 2026-03-17T08:05:04,825 adding 'cryodata/cs_star_translate/pyem/vop/__init__.py' 2026-03-17T08:05:04,826 adding 'cryodata/cs_star_translate/pyem/vop/binary.py' 2026-03-17T08:05:04,828 adding 'cryodata/cs_star_translate/pyem/vop/vop.py' 2026-03-17T08:05:04,830 adding 'cryodata/cs_star_translate/pyem/vop/vop_numba.py' 2026-03-17T08:05:04,832 adding 'cryodata/data_preprocess/__init__.py' 2026-03-17T08:05:04,834 adding 'cryodata/data_preprocess/fft.py' 2026-03-17T08:05:04,837 adding 'cryodata/data_preprocess/lmdb_preprocess.py' 2026-03-17T08:05:04,839 adding 'cryodata/data_preprocess/mrc.py' 2026-03-17T08:05:04,842 adding 'cryodata/data_preprocess/mrc_preprocess.py' 2026-03-17T08:05:04,846 adding 'cryodata-0.1.2b1.dist-info/METADATA' 2026-03-17T08:05:04,847 adding 'cryodata-0.1.2b1.dist-info/WHEEL' 2026-03-17T08:05:04,849 adding 'cryodata-0.1.2b1.dist-info/top_level.txt' 2026-03-17T08:05:04,850 adding 'cryodata-0.1.2b1.dist-info/RECORD' 2026-03-17T08:05:04,854 removing build/bdist.linux-armv7l/wheel 2026-03-17T08:05:04,960 Building wheel for cryodata (pyproject.toml): finished with status 'done' 2026-03-17T08:05:04,966 Created wheel for cryodata: filename=cryodata-0.1.2b1-py3-none-any.whl size=86893 sha256=f65e57042fdd7c2de39a0ce471f2b3080aebf6f3002668a5d2ae655a5e9f2fa6 2026-03-17T08:05:04,967 Stored in directory: /tmp/pip-ephem-wheel-cache-9nz28gd9/wheels/bb/2d/85/d85f7351f3207ac961e20dc2e1552ff025482c73cffb9b0bab 2026-03-17T08:05:04,982 Successfully built cryodata 2026-03-17T08:05:04,988 Removed build tracker: '/tmp/pip-build-tracker-klankh_m'