2026-03-17T19:23:24,390 Created temporary directory: /tmp/pip-ephem-wheel-cache-lum7vz_c 2026-03-17T19:23:24,392 Created temporary directory: /tmp/pip-build-tracker-tr8fpk0b 2026-03-17T19:23:24,392 Initialized build tracking at /tmp/pip-build-tracker-tr8fpk0b 2026-03-17T19:23:24,393 Created build tracker: /tmp/pip-build-tracker-tr8fpk0b 2026-03-17T19:23:24,393 Entered build tracker: /tmp/pip-build-tracker-tr8fpk0b 2026-03-17T19:23:24,394 Created temporary directory: /tmp/pip-wheel-iqrb7dvp 2026-03-17T19:23:24,397 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. 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https://www.piwheels.org/simple/mhctools/mhctools-2.0.0-py3-none-any.whl#sha256=23ade99fb9f0aa11ad869be61de86735d030f9a8bde0a9dbe39b00057975f80a (from https://www.piwheels.org/simple/mhctools/) (requires-python:>=3.9) 2026-03-17T19:23:24,863 Skipping link: No binaries permitted for mhctools: https://archive1.piwheels.org/simple/mhctools/mhctools-1.9.0-py3-none-any.whl#sha256=1ad4d331b25fb664897164e1a236c3d24dc9a7dedb0d838fe1c69bfc9dc2f26c (from https://www.piwheels.org/simple/mhctools/) 2026-03-17T19:23:24,864 Skipping link: No binaries permitted for mhctools: https://archive1.piwheels.org/simple/mhctools/mhctools-1.8.1-py3-none-any.whl#sha256=e6e5d85efdafb5010717bad80ad97224d942b685aabe0054558f3e6aeedf5252 (from https://www.piwheels.org/simple/mhctools/) 2026-03-17T19:23:24,864 Skipping link: No binaries permitted for mhctools: https://archive1.piwheels.org/simple/mhctools/mhctools-1.8.0-py3-none-any.whl#sha256=e0872fcabd93b209c6e2bc9e1f1e27001e9b9c6c82813805b57cfee7ca135ce7 (from https://www.piwheels.org/simple/mhctools/) 2026-03-17T19:23:24,865 Skipping link: No binaries permitted for mhctools: https://archive1.piwheels.org/simple/mhctools/mhctools-1.7.1-py3-none-any.whl#sha256=a3ff3aa431f0f9c36cd17a072441d94e392154b72a382a0ffd27bcc3663b4738 (from https://www.piwheels.org/simple/mhctools/) 2026-03-17T19:23:24,866 Skipping link: No binaries permitted for mhctools: https://archive1.piwheels.org/simple/mhctools/mhctools-1.7.0-py3-none-any.whl#sha256=2ab3943c24c1c0795f1c61d4fb4f18a5170ec4d19710825ed11ccc6a0e25f04b (from https://www.piwheels.org/simple/mhctools/) 2026-03-17T19:23:24,866 Skipping link: No binaries permitted for mhctools: https://archive1.piwheels.org/simple/mhctools/mhctools-1.6.23-py3-none-any.whl#sha256=d42910552e390c19431834df09a12ba45500148fad9a13a14eb0c92779a70f86 (from https://www.piwheels.org/simple/mhctools/) 2026-03-17T19:23:24,867 Skipping link: No binaries permitted for mhctools: 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https://www.piwheels.org/simple/mhctools/) 2026-03-17T19:23:24,892 Skipping link: No binaries permitted for mhctools: https://archive1.piwheels.org/simple/mhctools/mhctools-0.0.5-py3-none-any.whl#sha256=d74aa8febfb1ff9ae756cbdeea3c5950cd924b27fa562aa4473dce6eab0d3407 (from https://www.piwheels.org/simple/mhctools/) 2026-03-17T19:23:24,893 Skipping link: No binaries permitted for mhctools: https://archive1.piwheels.org/simple/mhctools/mhctools-0.0.4-py3-none-any.whl#sha256=dd546a0cc350d5ce77e7af9d45172c9a5f8c105974b73ffe49332bf32fcebb13 (from https://www.piwheels.org/simple/mhctools/) 2026-03-17T19:23:24,893 Skipping link: not a file: https://www.piwheels.org/simple/mhctools/ 2026-03-17T19:23:24,894 Skipping link: not a file: https://pypi.org/simple/mhctools/ 2026-03-17T19:23:24,920 Given no hashes to check 1 links for project 'mhctools': discarding no candidates 2026-03-17T19:23:24,938 Collecting mhctools==2.1.0 2026-03-17T19:23:24,940 Created temporary directory: /tmp/pip-unpack-pgaw1y7r 2026-03-17T19:23:25,151 Downloading mhctools-2.1.0.tar.gz (49 kB) 2026-03-17T19:23:25,307 Added mhctools==2.1.0 from https://files.pythonhosted.org/packages/4b/ba/adfe1f0d03ccb01445612749c644b05d34b3553b6423fb21373dbd246df9/mhctools-2.1.0.tar.gz to build tracker '/tmp/pip-build-tracker-tr8fpk0b' 2026-03-17T19:23:25,312 Created temporary directory: /tmp/pip-build-env-zz94mkqd 2026-03-17T19:23:25,317 Installing build dependencies: started 2026-03-17T19:23:25,318 Running command pip subprocess to install build dependencies 2026-03-17T19:23:26,454 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-03-17T19:23:27,080 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-03-17T19:23:27,103 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-03-17T19:23:29,094 Collecting setuptools>=61 2026-03-17T19:23:29,182 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-03-17T19:23:29,486 Collecting wheel 2026-03-17T19:23:29,501 Using cached https://www.piwheels.org/simple/wheel/wheel-0.46.3-py3-none-any.whl (30 kB) 2026-03-17T19:23:29,684 Collecting packaging>=24.0 2026-03-17T19:23:29,701 Using cached https://www.piwheels.org/simple/packaging/packaging-26.0-py3-none-any.whl (74 kB) 2026-03-17T19:23:32,649 Installing collected packages: setuptools, packaging, wheel 2026-03-17T19:23:36,016 Creating /tmp/pip-build-env-zz94mkqd/overlay/local/bin 2026-03-17T19:23:36,018 changing mode of /tmp/pip-build-env-zz94mkqd/overlay/local/bin/wheel to 755 2026-03-17T19:23:36,040 Successfully installed packaging-26.0 setuptools-82.0.1 wheel-0.46.3 2026-03-17T19:23:36,318 Installing build dependencies: finished with status 'done' 2026-03-17T19:23:36,324 Getting requirements to build wheel: started 2026-03-17T19:23:36,325 Running command Getting requirements to build wheel 2026-03-17T19:23:36,924 /tmp/pip-build-env-zz94mkqd/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-03-17T19:23:36,924 !! 2026-03-17T19:23:36,925 ******************************************************************************** 2026-03-17T19:23:36,926 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-03-17T19:23:36,929 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-03-17T19:23:36,932 or your builds will no longer be supported. 2026-03-17T19:23:36,933 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-17T19:23:36,933 ******************************************************************************** 2026-03-17T19:23:36,934 !! 2026-03-17T19:23:36,934 corresp(dist, value, root_dir) 2026-03-17T19:23:37,006 /tmp/pip-build-env-zz94mkqd/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-03-17T19:23:37,006 !! 2026-03-17T19:23:37,007 ******************************************************************************** 2026-03-17T19:23:37,008 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-03-17T19:23:37,009 License :: OSI Approved :: Apache Software License 2026-03-17T19:23:37,010 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-17T19:23:37,011 ******************************************************************************** 2026-03-17T19:23:37,012 !! 2026-03-17T19:23:37,013 dist._finalize_license_expression() 2026-03-17T19:23:37,014 /tmp/pip-build-env-zz94mkqd/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-03-17T19:23:37,015 !! 2026-03-17T19:23:37,016 ******************************************************************************** 2026-03-17T19:23:37,017 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-03-17T19:23:37,018 License :: OSI Approved :: Apache Software License 2026-03-17T19:23:37,019 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-17T19:23:37,019 ******************************************************************************** 2026-03-17T19:23:37,020 !! 2026-03-17T19:23:37,021 self._finalize_license_expression() 2026-03-17T19:23:37,024 running egg_info 2026-03-17T19:23:37,031 writing mhctools.egg-info/PKG-INFO 2026-03-17T19:23:37,036 writing dependency_links to mhctools.egg-info/dependency_links.txt 2026-03-17T19:23:37,038 writing entry points to mhctools.egg-info/entry_points.txt 2026-03-17T19:23:37,041 writing requirements to mhctools.egg-info/requires.txt 2026-03-17T19:23:37,043 writing top-level names to mhctools.egg-info/top_level.txt 2026-03-17T19:23:37,066 reading manifest file 'mhctools.egg-info/SOURCES.txt' 2026-03-17T19:23:37,071 reading manifest template 'MANIFEST.in' 2026-03-17T19:23:37,073 adding license file 'LICENSE' 2026-03-17T19:23:37,078 writing manifest file 'mhctools.egg-info/SOURCES.txt' 2026-03-17T19:23:37,175 Getting requirements to build wheel: finished with status 'done' 2026-03-17T19:23:37,178 Created temporary directory: /tmp/pip-modern-metadata-pdp11vuv 2026-03-17T19:23:37,180 Preparing metadata (pyproject.toml): started 2026-03-17T19:23:37,181 Running command Preparing metadata (pyproject.toml) 2026-03-17T19:23:37,776 /tmp/pip-build-env-zz94mkqd/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-03-17T19:23:37,776 !! 2026-03-17T19:23:37,777 ******************************************************************************** 2026-03-17T19:23:37,778 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-03-17T19:23:37,779 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-03-17T19:23:37,779 or your builds will no longer be supported. 2026-03-17T19:23:37,780 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-17T19:23:37,780 ******************************************************************************** 2026-03-17T19:23:37,781 !! 2026-03-17T19:23:37,782 corresp(dist, value, root_dir) 2026-03-17T19:23:37,853 /tmp/pip-build-env-zz94mkqd/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-03-17T19:23:37,853 !! 2026-03-17T19:23:37,854 ******************************************************************************** 2026-03-17T19:23:37,855 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-03-17T19:23:37,856 License :: OSI Approved :: Apache Software License 2026-03-17T19:23:37,857 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-17T19:23:37,858 ******************************************************************************** 2026-03-17T19:23:37,859 !! 2026-03-17T19:23:37,860 dist._finalize_license_expression() 2026-03-17T19:23:37,860 /tmp/pip-build-env-zz94mkqd/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-03-17T19:23:37,861 !! 2026-03-17T19:23:37,862 ******************************************************************************** 2026-03-17T19:23:37,863 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-03-17T19:23:37,864 License :: OSI Approved :: Apache Software License 2026-03-17T19:23:37,865 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-17T19:23:37,866 ******************************************************************************** 2026-03-17T19:23:37,867 !! 2026-03-17T19:23:37,867 self._finalize_license_expression() 2026-03-17T19:23:37,868 running dist_info 2026-03-17T19:23:37,876 creating /tmp/pip-modern-metadata-pdp11vuv/mhctools.egg-info 2026-03-17T19:23:37,877 writing /tmp/pip-modern-metadata-pdp11vuv/mhctools.egg-info/PKG-INFO 2026-03-17T19:23:37,882 writing dependency_links to /tmp/pip-modern-metadata-pdp11vuv/mhctools.egg-info/dependency_links.txt 2026-03-17T19:23:37,884 writing entry points to /tmp/pip-modern-metadata-pdp11vuv/mhctools.egg-info/entry_points.txt 2026-03-17T19:23:37,886 writing requirements to /tmp/pip-modern-metadata-pdp11vuv/mhctools.egg-info/requires.txt 2026-03-17T19:23:37,887 writing top-level names to /tmp/pip-modern-metadata-pdp11vuv/mhctools.egg-info/top_level.txt 2026-03-17T19:23:37,888 writing manifest file '/tmp/pip-modern-metadata-pdp11vuv/mhctools.egg-info/SOURCES.txt' 2026-03-17T19:23:37,908 reading manifest file '/tmp/pip-modern-metadata-pdp11vuv/mhctools.egg-info/SOURCES.txt' 2026-03-17T19:23:37,910 reading manifest template 'MANIFEST.in' 2026-03-17T19:23:37,911 adding license file 'LICENSE' 2026-03-17T19:23:37,915 writing manifest file '/tmp/pip-modern-metadata-pdp11vuv/mhctools.egg-info/SOURCES.txt' 2026-03-17T19:23:37,916 creating '/tmp/pip-modern-metadata-pdp11vuv/mhctools-2.1.0.dist-info' 2026-03-17T19:23:38,039 Preparing metadata (pyproject.toml): finished with status 'done' 2026-03-17T19:23:38,043 Source in /tmp/pip-wheel-iqrb7dvp/mhctools_9b3c6ae5695646f1bcda189a1ec31962 has version 2.1.0, which satisfies requirement mhctools==2.1.0 from https://files.pythonhosted.org/packages/4b/ba/adfe1f0d03ccb01445612749c644b05d34b3553b6423fb21373dbd246df9/mhctools-2.1.0.tar.gz 2026-03-17T19:23:38,044 Removed mhctools==2.1.0 from https://files.pythonhosted.org/packages/4b/ba/adfe1f0d03ccb01445612749c644b05d34b3553b6423fb21373dbd246df9/mhctools-2.1.0.tar.gz from build tracker '/tmp/pip-build-tracker-tr8fpk0b' 2026-03-17T19:23:38,050 Created temporary directory: /tmp/pip-unpack-ckfxt2dy 2026-03-17T19:23:38,050 Building wheels for collected packages: mhctools 2026-03-17T19:23:38,055 Created temporary directory: /tmp/pip-wheel-vyvgajkl 2026-03-17T19:23:38,056 Destination directory: /tmp/pip-wheel-vyvgajkl 2026-03-17T19:23:38,058 Building wheel for mhctools (pyproject.toml): started 2026-03-17T19:23:38,059 Running command Building wheel for mhctools (pyproject.toml) 2026-03-17T19:23:38,606 /tmp/pip-build-env-zz94mkqd/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-03-17T19:23:38,606 !! 2026-03-17T19:23:38,607 ******************************************************************************** 2026-03-17T19:23:38,608 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-03-17T19:23:38,609 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-03-17T19:23:38,609 or your builds will no longer be supported. 2026-03-17T19:23:38,611 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-17T19:23:38,611 ******************************************************************************** 2026-03-17T19:23:38,613 !! 2026-03-17T19:23:38,613 corresp(dist, value, root_dir) 2026-03-17T19:23:38,680 /tmp/pip-build-env-zz94mkqd/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-03-17T19:23:38,680 !! 2026-03-17T19:23:38,682 ******************************************************************************** 2026-03-17T19:23:38,682 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-03-17T19:23:38,683 License :: OSI Approved :: Apache Software License 2026-03-17T19:23:38,684 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-17T19:23:38,685 ******************************************************************************** 2026-03-17T19:23:38,686 !! 2026-03-17T19:23:38,687 dist._finalize_license_expression() 2026-03-17T19:23:38,687 /tmp/pip-build-env-zz94mkqd/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-03-17T19:23:38,688 !! 2026-03-17T19:23:38,689 ******************************************************************************** 2026-03-17T19:23:38,690 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-03-17T19:23:38,691 License :: OSI Approved :: Apache Software License 2026-03-17T19:23:38,693 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-17T19:23:38,693 ******************************************************************************** 2026-03-17T19:23:38,694 !! 2026-03-17T19:23:38,695 self._finalize_license_expression() 2026-03-17T19:23:38,695 running bdist_wheel 2026-03-17T19:23:38,709 running build 2026-03-17T19:23:38,710 running build_py 2026-03-17T19:23:38,717 creating build/lib/mhctools 2026-03-17T19:23:38,719 copying mhctools/netchop.py -> build/lib/mhctools 2026-03-17T19:23:38,721 copying mhctools/parsing.py -> build/lib/mhctools 2026-03-17T19:23:38,724 copying mhctools/binding_prediction.py -> build/lib/mhctools 2026-03-17T19:23:38,726 copying mhctools/netmhc3.py -> build/lib/mhctools 2026-03-17T19:23:38,728 copying mhctools/process_helpers.py -> build/lib/mhctools 2026-03-17T19:23:38,730 copying mhctools/allele_normalization.py -> build/lib/mhctools 2026-03-17T19:23:38,733 copying mhctools/netmhc_pan41.py -> build/lib/mhctools 2026-03-17T19:23:38,735 copying mhctools/netmhcstabpan.py -> build/lib/mhctools 2026-03-17T19:23:38,736 copying mhctools/base_predictor.py -> build/lib/mhctools 2026-03-17T19:23:38,739 copying mhctools/netmhc4.py -> build/lib/mhctools 2026-03-17T19:23:38,741 copying mhctools/binding_prediction_collection.py -> build/lib/mhctools 2026-03-17T19:23:38,742 copying mhctools/__init__.py -> build/lib/mhctools 2026-03-17T19:23:38,744 copying mhctools/mhcflurry.py -> build/lib/mhctools 2026-03-17T19:23:38,746 copying mhctools/input_file_formats.py -> build/lib/mhctools 2026-03-17T19:23:38,748 copying mhctools/base_commandline_predictor.py -> build/lib/mhctools 2026-03-17T19:23:38,750 copying mhctools/unsupported_allele.py -> build/lib/mhctools 2026-03-17T19:23:38,752 copying mhctools/netmhc.py -> build/lib/mhctools 2026-03-17T19:23:38,754 copying mhctools/netmhc_pan28.py -> build/lib/mhctools 2026-03-17T19:23:38,756 copying mhctools/common.py -> build/lib/mhctools 2026-03-17T19:23:38,758 copying mhctools/logging.py -> build/lib/mhctools 2026-03-17T19:23:38,760 copying mhctools/netmhc_pan4.py -> build/lib/mhctools 2026-03-17T19:23:38,762 copying mhctools/cleanup_context.py -> build/lib/mhctools 2026-03-17T19:23:38,763 copying mhctools/mixmhcpred.py -> build/lib/mhctools 2026-03-17T19:23:38,766 copying mhctools/iedb.py -> build/lib/mhctools 2026-03-17T19:23:38,768 copying mhctools/netmhc_pan.py -> build/lib/mhctools 2026-03-17T19:23:38,770 copying mhctools/netmhcii_pan.py -> build/lib/mhctools 2026-03-17T19:23:38,772 copying mhctools/netmhc_cons.py -> build/lib/mhctools 2026-03-17T19:23:38,774 copying mhctools/netmhc_pan3.py -> build/lib/mhctools 2026-03-17T19:23:38,776 copying mhctools/random_predictor.py -> build/lib/mhctools 2026-03-17T19:23:38,779 creating build/lib/mhctools/cli 2026-03-17T19:23:38,780 copying mhctools/cli/script.py -> build/lib/mhctools/cli 2026-03-17T19:23:38,782 copying mhctools/cli/parsing_helpers.py -> build/lib/mhctools/cli 2026-03-17T19:23:38,784 copying mhctools/cli/__init__.py -> build/lib/mhctools/cli 2026-03-17T19:23:38,786 copying mhctools/cli/args.py -> build/lib/mhctools/cli 2026-03-17T19:23:38,788 running egg_info 2026-03-17T19:23:38,798 writing mhctools.egg-info/PKG-INFO 2026-03-17T19:23:38,802 writing dependency_links to mhctools.egg-info/dependency_links.txt 2026-03-17T19:23:38,804 writing entry points to mhctools.egg-info/entry_points.txt 2026-03-17T19:23:38,806 writing requirements to mhctools.egg-info/requires.txt 2026-03-17T19:23:38,807 writing top-level names to mhctools.egg-info/top_level.txt 2026-03-17T19:23:38,818 reading manifest file 'mhctools.egg-info/SOURCES.txt' 2026-03-17T19:23:38,823 reading manifest template 'MANIFEST.in' 2026-03-17T19:23:38,824 adding license file 'LICENSE' 2026-03-17T19:23:38,828 writing manifest file 'mhctools.egg-info/SOURCES.txt' 2026-03-17T19:23:38,832 copying mhctools/logging.conf -> build/lib/mhctools 2026-03-17T19:23:38,846 installing to build/bdist.linux-armv7l/wheel 2026-03-17T19:23:38,846 running install 2026-03-17T19:23:38,869 running install_lib 2026-03-17T19:23:38,874 creating build/bdist.linux-armv7l/wheel 2026-03-17T19:23:38,877 creating build/bdist.linux-armv7l/wheel/mhctools 2026-03-17T19:23:38,878 copying build/lib/mhctools/netchop.py -> build/bdist.linux-armv7l/wheel/./mhctools 2026-03-17T19:23:38,880 copying build/lib/mhctools/parsing.py -> build/bdist.linux-armv7l/wheel/./mhctools 2026-03-17T19:23:38,884 copying build/lib/mhctools/binding_prediction.py -> build/bdist.linux-armv7l/wheel/./mhctools 2026-03-17T19:23:38,886 copying build/lib/mhctools/netmhc3.py -> build/bdist.linux-armv7l/wheel/./mhctools 2026-03-17T19:23:38,888 copying build/lib/mhctools/process_helpers.py -> build/bdist.linux-armv7l/wheel/./mhctools 2026-03-17T19:23:38,890 copying build/lib/mhctools/allele_normalization.py -> build/bdist.linux-armv7l/wheel/./mhctools 2026-03-17T19:23:38,893 copying build/lib/mhctools/netmhc_pan41.py -> build/bdist.linux-armv7l/wheel/./mhctools 2026-03-17T19:23:38,895 copying build/lib/mhctools/logging.conf -> build/bdist.linux-armv7l/wheel/./mhctools 2026-03-17T19:23:38,897 copying build/lib/mhctools/netmhcstabpan.py -> build/bdist.linux-armv7l/wheel/./mhctools 2026-03-17T19:23:38,899 copying build/lib/mhctools/base_predictor.py -> build/bdist.linux-armv7l/wheel/./mhctools 2026-03-17T19:23:38,901 copying build/lib/mhctools/netmhc4.py -> build/bdist.linux-armv7l/wheel/./mhctools 2026-03-17T19:23:38,903 copying build/lib/mhctools/binding_prediction_collection.py -> build/bdist.linux-armv7l/wheel/./mhctools 2026-03-17T19:23:38,905 copying build/lib/mhctools/__init__.py -> build/bdist.linux-armv7l/wheel/./mhctools 2026-03-17T19:23:38,907 copying build/lib/mhctools/mhcflurry.py -> build/bdist.linux-armv7l/wheel/./mhctools 2026-03-17T19:23:38,909 creating build/bdist.linux-armv7l/wheel/mhctools/cli 2026-03-17T19:23:38,910 copying build/lib/mhctools/cli/script.py -> build/bdist.linux-armv7l/wheel/./mhctools/cli 2026-03-17T19:23:38,912 copying build/lib/mhctools/cli/parsing_helpers.py -> build/bdist.linux-armv7l/wheel/./mhctools/cli 2026-03-17T19:23:38,914 copying build/lib/mhctools/cli/__init__.py -> build/bdist.linux-armv7l/wheel/./mhctools/cli 2026-03-17T19:23:38,916 copying build/lib/mhctools/cli/args.py -> build/bdist.linux-armv7l/wheel/./mhctools/cli 2026-03-17T19:23:38,919 copying build/lib/mhctools/input_file_formats.py -> build/bdist.linux-armv7l/wheel/./mhctools 2026-03-17T19:23:38,921 copying build/lib/mhctools/base_commandline_predictor.py -> build/bdist.linux-armv7l/wheel/./mhctools 2026-03-17T19:23:38,924 copying build/lib/mhctools/unsupported_allele.py -> build/bdist.linux-armv7l/wheel/./mhctools 2026-03-17T19:23:38,926 copying build/lib/mhctools/netmhc.py -> build/bdist.linux-armv7l/wheel/./mhctools 2026-03-17T19:23:38,928 copying build/lib/mhctools/netmhc_pan28.py -> build/bdist.linux-armv7l/wheel/./mhctools 2026-03-17T19:23:38,931 copying build/lib/mhctools/common.py -> build/bdist.linux-armv7l/wheel/./mhctools 2026-03-17T19:23:38,933 copying build/lib/mhctools/logging.py -> build/bdist.linux-armv7l/wheel/./mhctools 2026-03-17T19:23:38,936 copying build/lib/mhctools/netmhc_pan4.py -> build/bdist.linux-armv7l/wheel/./mhctools 2026-03-17T19:23:38,939 copying build/lib/mhctools/cleanup_context.py -> build/bdist.linux-armv7l/wheel/./mhctools 2026-03-17T19:23:38,941 copying build/lib/mhctools/mixmhcpred.py -> build/bdist.linux-armv7l/wheel/./mhctools 2026-03-17T19:23:38,944 copying build/lib/mhctools/iedb.py -> build/bdist.linux-armv7l/wheel/./mhctools 2026-03-17T19:23:38,946 copying build/lib/mhctools/netmhc_pan.py -> build/bdist.linux-armv7l/wheel/./mhctools 2026-03-17T19:23:38,948 copying build/lib/mhctools/netmhcii_pan.py -> build/bdist.linux-armv7l/wheel/./mhctools 2026-03-17T19:23:38,950 copying build/lib/mhctools/netmhc_cons.py -> build/bdist.linux-armv7l/wheel/./mhctools 2026-03-17T19:23:38,953 copying build/lib/mhctools/netmhc_pan3.py -> build/bdist.linux-armv7l/wheel/./mhctools 2026-03-17T19:23:38,955 copying build/lib/mhctools/random_predictor.py -> build/bdist.linux-armv7l/wheel/./mhctools 2026-03-17T19:23:38,957 running install_egg_info 2026-03-17T19:23:38,962 Copying mhctools.egg-info to build/bdist.linux-armv7l/wheel/./mhctools-2.1.0-py3.11.egg-info 2026-03-17T19:23:38,974 running install_scripts 2026-03-17T19:23:38,990 creating build/bdist.linux-armv7l/wheel/mhctools-2.1.0.dist-info/WHEEL 2026-03-17T19:23:38,993 creating '/tmp/pip-wheel-vyvgajkl/.tmp-2t5en41i/mhctools-2.1.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-03-17T19:23:38,996 adding 'mhctools/__init__.py' 2026-03-17T19:23:38,998 adding 'mhctools/allele_normalization.py' 2026-03-17T19:23:39,000 adding 'mhctools/base_commandline_predictor.py' 2026-03-17T19:23:39,002 adding 'mhctools/base_predictor.py' 2026-03-17T19:23:39,003 adding 'mhctools/binding_prediction.py' 2026-03-17T19:23:39,004 adding 'mhctools/binding_prediction_collection.py' 2026-03-17T19:23:39,006 adding 'mhctools/cleanup_context.py' 2026-03-17T19:23:39,007 adding 'mhctools/common.py' 2026-03-17T19:23:39,009 adding 'mhctools/iedb.py' 2026-03-17T19:23:39,011 adding 'mhctools/input_file_formats.py' 2026-03-17T19:23:39,012 adding 'mhctools/logging.conf' 2026-03-17T19:23:39,013 adding 'mhctools/logging.py' 2026-03-17T19:23:39,015 adding 'mhctools/mhcflurry.py' 2026-03-17T19:23:39,017 adding 'mhctools/mixmhcpred.py' 2026-03-17T19:23:39,018 adding 'mhctools/netchop.py' 2026-03-17T19:23:39,019 adding 'mhctools/netmhc.py' 2026-03-17T19:23:39,021 adding 'mhctools/netmhc3.py' 2026-03-17T19:23:39,022 adding 'mhctools/netmhc4.py' 2026-03-17T19:23:39,023 adding 'mhctools/netmhc_cons.py' 2026-03-17T19:23:39,025 adding 'mhctools/netmhc_pan.py' 2026-03-17T19:23:39,026 adding 'mhctools/netmhc_pan28.py' 2026-03-17T19:23:39,028 adding 'mhctools/netmhc_pan3.py' 2026-03-17T19:23:39,029 adding 'mhctools/netmhc_pan4.py' 2026-03-17T19:23:39,031 adding 'mhctools/netmhc_pan41.py' 2026-03-17T19:23:39,032 adding 'mhctools/netmhcii_pan.py' 2026-03-17T19:23:39,034 adding 'mhctools/netmhcstabpan.py' 2026-03-17T19:23:39,037 adding 'mhctools/parsing.py' 2026-03-17T19:23:39,039 adding 'mhctools/process_helpers.py' 2026-03-17T19:23:39,040 adding 'mhctools/random_predictor.py' 2026-03-17T19:23:39,041 adding 'mhctools/unsupported_allele.py' 2026-03-17T19:23:39,043 adding 'mhctools/cli/__init__.py' 2026-03-17T19:23:39,045 adding 'mhctools/cli/args.py' 2026-03-17T19:23:39,046 adding 'mhctools/cli/parsing_helpers.py' 2026-03-17T19:23:39,047 adding 'mhctools/cli/script.py' 2026-03-17T19:23:39,051 adding 'mhctools-2.1.0.dist-info/licenses/LICENSE' 2026-03-17T19:23:39,053 adding 'mhctools-2.1.0.dist-info/METADATA' 2026-03-17T19:23:39,053 adding 'mhctools-2.1.0.dist-info/WHEEL' 2026-03-17T19:23:39,054 adding 'mhctools-2.1.0.dist-info/entry_points.txt' 2026-03-17T19:23:39,056 adding 'mhctools-2.1.0.dist-info/top_level.txt' 2026-03-17T19:23:39,057 adding 'mhctools-2.1.0.dist-info/RECORD' 2026-03-17T19:23:39,059 removing build/bdist.linux-armv7l/wheel 2026-03-17T19:23:39,166 Building wheel for mhctools (pyproject.toml): finished with status 'done' 2026-03-17T19:23:39,173 Created wheel for mhctools: filename=mhctools-2.1.0-py3-none-any.whl size=59290 sha256=177dc2a7c53d9e7714a04de6de66f5dcd1569fc402e87fee19f29e7a0a8cd7d0 2026-03-17T19:23:39,174 Stored in directory: /tmp/pip-ephem-wheel-cache-h8vaj6eq/wheels/80/64/3d/d5ef4346ebc2bd7430609b03e8fe1a03a4ef762708bc139ff9 2026-03-17T19:23:39,186 Successfully built mhctools 2026-03-17T19:23:39,191 Removed build tracker: '/tmp/pip-build-tracker-tr8fpk0b'