2026-03-26T22:27:47,153 Created temporary directory: /tmp/pip-ephem-wheel-cache-17s4xn5e 2026-03-26T22:27:47,155 Created temporary directory: /tmp/pip-build-tracker-vptqk040 2026-03-26T22:27:47,155 Initialized build tracking at /tmp/pip-build-tracker-vptqk040 2026-03-26T22:27:47,156 Created build tracker: /tmp/pip-build-tracker-vptqk040 2026-03-26T22:27:47,156 Entered build tracker: /tmp/pip-build-tracker-vptqk040 2026-03-26T22:27:47,157 Created temporary directory: /tmp/pip-wheel-nyg3wk8z 2026-03-26T22:27:47,159 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-03-26T22:27:47,162 Created temporary directory: /tmp/pip-ephem-wheel-cache-1h8kfkzi 2026-03-26T22:27:47,183 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-03-26T22:27:47,187 2 location(s) to search for versions of bioio: 2026-03-26T22:27:47,187 * https://pypi.org/simple/bioio/ 2026-03-26T22:27:47,187 * https://www.piwheels.org/simple/bioio/ 2026-03-26T22:27:47,188 Fetching project page and analyzing links: https://pypi.org/simple/bioio/ 2026-03-26T22:27:47,189 Getting page https://pypi.org/simple/bioio/ 2026-03-26T22:27:47,190 Found index url https://pypi.org/simple 2026-03-26T22:27:47,415 Fetched page https://pypi.org/simple/bioio/ as application/vnd.pypi.simple.v1+json 2026-03-26T22:27:47,424 Skipping link: No binaries permitted for bioio: https://files.pythonhosted.org/packages/ec/85/18a0360b412b68373b948dcfec4ca5cf06614323162dc1cf6e867582348a/bioio-0.0.1-py3-none-any.whl (from https://pypi.org/simple/bioio/) (requires-python:>=3.8) 2026-03-26T22:27:47,425 Found link https://files.pythonhosted.org/packages/9f/68/d7d74b861ab32b5ffc9908221dfd88c02852a0d59623e97717259f2e867f/bioio-0.0.1.tar.gz (from https://pypi.org/simple/bioio/) (requires-python:>=3.8), version: 0.0.1 2026-03-26T22:27:47,425 Skipping link: No binaries permitted for bioio: https://files.pythonhosted.org/packages/c0/45/cab49f617fbf376122ebf477da6f52efa1659b7cd9033d24e7d38bfb23fd/bioio-0.9.0-py3-none-any.whl (from https://pypi.org/simple/bioio/) (requires-python:>=3.9) 2026-03-26T22:27:47,426 Found link https://files.pythonhosted.org/packages/66/3a/d1f8296ee261b409702573edc3cda30e5ff3ede1674bc26821b4177f06d5/bioio-0.9.0.tar.gz (from https://pypi.org/simple/bioio/) (requires-python:>=3.9), version: 0.9.0 2026-03-26T22:27:47,427 Skipping link: No binaries permitted for bioio: 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2026-03-26T22:27:47,437 Skipping link: No binaries permitted for bioio: https://files.pythonhosted.org/packages/58/fc/ec23738a400cac3b0ae0434fb18ce5942a3e35457129229b33fe26c5733c/bioio-1.2.1-py3-none-any.whl (from https://pypi.org/simple/bioio/) (requires-python:>=3.9) 2026-03-26T22:27:47,438 Found link https://files.pythonhosted.org/packages/2b/45/cb162089363e58a259ffc0948542230004b0977224f844ba45d37e287040/bioio-1.2.1.tar.gz (from https://pypi.org/simple/bioio/) (requires-python:>=3.9), version: 1.2.1 2026-03-26T22:27:47,438 Skipping link: No binaries permitted for bioio: https://files.pythonhosted.org/packages/6c/8c/e335c17ec4c0a4be321e0ed4dfc4cbab26424a1770aadeb73bb5c5b7cc42/bioio-1.3.0-py3-none-any.whl (from https://pypi.org/simple/bioio/) (requires-python:>=3.10) 2026-03-26T22:27:47,439 Found link https://files.pythonhosted.org/packages/dc/f9/992cdf05b2dc858ae140f13099408e5d6038896ef09c0dcfab35361e18db/bioio-1.3.0.tar.gz (from https://pypi.org/simple/bioio/) (requires-python:>=3.10), version: 1.3.0 2026-03-26T22:27:47,440 Skipping link: No binaries permitted for bioio: https://files.pythonhosted.org/packages/90/13/3161a0d5ea9c8ddf6df932d024d0369e4754e7aaf6dfa49e03bcd83cdc13/bioio-1.4.0-py3-none-any.whl (from https://pypi.org/simple/bioio/) (requires-python:>=3.10) 2026-03-26T22:27:47,440 Found link https://files.pythonhosted.org/packages/dc/a2/95be51b5110b72a8f9a38255220cc34d6dffbe1dc6865f42e963d01f5401/bioio-1.4.0.tar.gz (from https://pypi.org/simple/bioio/) (requires-python:>=3.10), version: 1.4.0 2026-03-26T22:27:47,441 Skipping link: No binaries permitted for bioio: https://files.pythonhosted.org/packages/e8/fe/88a5bc2ae926f15c8ea10e9964aeac11c9fce82760bc778fd6b1316ca8c1/bioio-1.5.0-py3-none-any.whl (from https://pypi.org/simple/bioio/) (requires-python:>=3.10) 2026-03-26T22:27:47,442 Found link https://files.pythonhosted.org/packages/cb/75/53c354e6e0944cb4b979b8bb126b8594ca1e7b5ed2ec82f1fb60dde7f6df/bioio-1.5.0.tar.gz (from 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2026-03-26T22:27:47,448 Found link https://files.pythonhosted.org/packages/0a/17/a1b9dde99bd4c76cf00d1856c8f00c4e0b68b6ea8bfddd6a567e51f60df6/bioio-2.0.0.tar.gz (from https://pypi.org/simple/bioio/) (requires-python:>=3.10), version: 2.0.0 2026-03-26T22:27:47,449 Skipping link: No binaries permitted for bioio: https://files.pythonhosted.org/packages/a1/02/c6713b1d38fdf6b705265e8def466ed22f62c0684b8ee030809ad396924e/bioio-3.0.0-py3-none-any.whl (from https://pypi.org/simple/bioio/) (requires-python:>=3.10) 2026-03-26T22:27:47,450 Found link https://files.pythonhosted.org/packages/f1/95/0f9c15d0e329da74d63ad8495ddb6563d53ee27bc4eea9dc471f59648015/bioio-3.0.0.tar.gz (from https://pypi.org/simple/bioio/) (requires-python:>=3.10), version: 3.0.0 2026-03-26T22:27:47,451 Skipping link: No binaries permitted for bioio: https://files.pythonhosted.org/packages/ce/2f/3d487c4147a3af1948a214e93d7c0dc3e05b6e2ccd47f6b1c212a11239df/bioio-3.1.0-py3-none-any.whl (from https://pypi.org/simple/bioio/) (requires-python:>=3.10) 2026-03-26T22:27:47,452 Found link https://files.pythonhosted.org/packages/e2/80/9e29c3cb436c5ef0131444b9696a6cd2f9cfb56be3521d28da6ecd2b1101/bioio-3.1.0.tar.gz (from https://pypi.org/simple/bioio/) (requires-python:>=3.10), version: 3.1.0 2026-03-26T22:27:47,452 Skipping link: No binaries permitted for bioio: https://files.pythonhosted.org/packages/ae/5f/96a446d850b19d1bdb5bbb0d49eec2efa6b396cd5efb6d1e5d84cf03cad9/bioio-3.2.0-py3-none-any.whl (from https://pypi.org/simple/bioio/) (requires-python:>=3.10) 2026-03-26T22:27:47,453 Found link https://files.pythonhosted.org/packages/21/29/0534e35d8bcbe24b7626625352acb2d606fb3f290c2e39fa0e1085f08b67/bioio-3.2.0.tar.gz (from https://pypi.org/simple/bioio/) (requires-python:>=3.10), version: 3.2.0 2026-03-26T22:27:47,454 Skipping link: No binaries permitted for bioio: https://files.pythonhosted.org/packages/c4/94/7609abde5ed45a91877e46111bfd0260de30d9a3a56e370f697cb783cd8e/bioio-3.3.0-py3-none-any.whl (from 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https://archive1.piwheels.org/simple/bioio/bioio-1.0.3-py3-none-any.whl#sha256=b004d0fb6519ef695203c5a634cc5bde53a90826e54ed0e84a43647c7ceeda84 (from https://www.piwheels.org/simple/bioio/) (requires-python:>=3.9) 2026-03-26T22:27:47,649 Skipping link: No binaries permitted for bioio: https://archive1.piwheels.org/simple/bioio/bioio-1.0.2-py3-none-any.whl#sha256=f4a4cb08e669d2759a3a3174183cd01cfd34d0662f80555f564e2fe4857e3a8c (from https://www.piwheels.org/simple/bioio/) (requires-python:>=3.9) 2026-03-26T22:27:47,649 Skipping link: No binaries permitted for bioio: https://archive1.piwheels.org/simple/bioio/bioio-1.0.1-py3-none-any.whl#sha256=0f88dfd65e2dc8224f8281d276d8fbc22eb1c4c8fe919616ae344a8115b82ed5 (from https://www.piwheels.org/simple/bioio/) (requires-python:>=3.9) 2026-03-26T22:27:47,650 Skipping link: No binaries permitted for bioio: https://archive1.piwheels.org/simple/bioio/bioio-1.0.0-py3-none-any.whl#sha256=9cdf1d2c7a7745467b3a12f1c228b95c113ea7ab75783f0b309128524f5538b4 (from https://www.piwheels.org/simple/bioio/) (requires-python:>=3.9) 2026-03-26T22:27:47,650 Skipping link: No binaries permitted for bioio: https://archive1.piwheels.org/simple/bioio/bioio-0.9.0-py3-none-any.whl#sha256=8f364e12cc93bff8588ec4abc17b7fee8259db430268d68dc0826b340cd12467 (from https://www.piwheels.org/simple/bioio/) (requires-python:>=3.9) 2026-03-26T22:27:47,651 Skipping link: No binaries permitted for bioio: https://archive1.piwheels.org/simple/bioio/bioio-0.0.1-py3-none-any.whl#sha256=4cf5623749a4c10aecaa4bc13a137106f7fc6e14af282a0f21ea0505ffe8cf85 (from https://www.piwheels.org/simple/bioio/) (requires-python:>=3.8) 2026-03-26T22:27:47,651 Skipping link: not a file: https://www.piwheels.org/simple/bioio/ 2026-03-26T22:27:47,652 Skipping link: not a file: https://pypi.org/simple/bioio/ 2026-03-26T22:27:47,673 Given no hashes to check 1 links for project 'bioio': discarding no candidates 2026-03-26T22:27:47,691 Collecting bioio==3.3.0 2026-03-26T22:27:47,693 Created temporary directory: /tmp/pip-unpack-9x77byjm 2026-03-26T22:27:47,922 Downloading bioio-3.3.0.tar.gz (60 kB) 2026-03-26T22:27:48,060 Added bioio==3.3.0 from https://files.pythonhosted.org/packages/99/0f/2e6ef1db997626168f618835c87cca34da5c7de6a7a10d19c3f43f342c39/bioio-3.3.0.tar.gz to build tracker '/tmp/pip-build-tracker-vptqk040' 2026-03-26T22:27:48,069 Created temporary directory: /tmp/pip-build-env-2vcdnpj5 2026-03-26T22:27:48,073 Installing build dependencies: started 2026-03-26T22:27:48,074 Running command pip subprocess to install build dependencies 2026-03-26T22:27:49,237 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-03-26T22:27:49,704 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-03-26T22:27:49,727 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-03-26T22:27:51,546 Collecting setuptools>=65 2026-03-26T22:27:51,631 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-03-26T22:27:51,906 Collecting wheel 2026-03-26T22:27:51,923 Using cached https://www.piwheels.org/simple/wheel/wheel-0.46.3-py3-none-any.whl (30 kB) 2026-03-26T22:27:52,264 Collecting setuptools_scm[toml]>=6.2 2026-03-26T22:27:52,270 Using cached setuptools_scm-10.0.3-py3-none-any.whl (20 kB) 2026-03-26T22:27:52,459 Collecting packaging>=24.0 2026-03-26T22:27:52,476 Using cached https://www.piwheels.org/simple/packaging/packaging-26.0-py3-none-any.whl (74 kB) 2026-03-26T22:27:52,556 Collecting vcs-versioning>=1.0.0.dev0 2026-03-26T22:27:52,574 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.0.1-py3-none-any.whl (78 kB) 2026-03-26T22:27:55,637 Installing collected packages: setuptools, packaging, wheel, vcs-versioning, setuptools_scm 2026-03-26T22:27:58,988 Creating /tmp/pip-build-env-2vcdnpj5/overlay/local/bin 2026-03-26T22:27:58,990 changing mode of /tmp/pip-build-env-2vcdnpj5/overlay/local/bin/wheel to 755 2026-03-26T22:27:59,290 changing mode of /tmp/pip-build-env-2vcdnpj5/overlay/local/bin/vcs-versioning to 755 2026-03-26T22:27:59,399 changing mode of /tmp/pip-build-env-2vcdnpj5/overlay/local/bin/setuptools-scm to 755 2026-03-26T22:27:59,433 Successfully installed packaging-26.0 setuptools-82.0.1 setuptools_scm-10.0.3 vcs-versioning-1.0.1 wheel-0.46.3 2026-03-26T22:27:59,723 Installing build dependencies: finished with status 'done' 2026-03-26T22:27:59,729 Getting requirements to build wheel: started 2026-03-26T22:27:59,731 Running command Getting requirements to build wheel 2026-03-26T22:28:00,459 /tmp/pip-build-env-2vcdnpj5/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-03-26T22:28:00,459 !! 2026-03-26T22:28:00,460 ******************************************************************************** 2026-03-26T22:28:00,460 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-03-26T22:28:00,461 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-03-26T22:28:00,462 or your builds will no longer be supported. 2026-03-26T22:28:00,463 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-26T22:28:00,464 ******************************************************************************** 2026-03-26T22:28:00,465 !! 2026-03-26T22:28:00,466 corresp(dist, value, root_dir) 2026-03-26T22:28:00,555 running egg_info 2026-03-26T22:28:00,563 writing bioio.egg-info/PKG-INFO 2026-03-26T22:28:00,572 writing dependency_links to bioio.egg-info/dependency_links.txt 2026-03-26T22:28:00,577 writing requirements to bioio.egg-info/requires.txt 2026-03-26T22:28:00,579 writing top-level names to bioio.egg-info/top_level.txt 2026-03-26T22:28:00,622 /tmp/pip-build-env-2vcdnpj5/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-03-26T22:28:00,622 return get_active_overrides().subprocess_timeout 2026-03-26T22:28:00,629 listing git files failed - pretending there aren't any 2026-03-26T22:28:00,634 reading manifest file 'bioio.egg-info/SOURCES.txt' 2026-03-26T22:28:00,639 reading manifest template 'MANIFEST.in' 2026-03-26T22:28:00,646 warning: no files found matching '*.toml' under directory 'bioio' 2026-03-26T22:28:00,646 warning: no previously-included files found matching '*/tests' 2026-03-26T22:28:00,647 adding license file 'LICENSE' 2026-03-26T22:28:00,650 writing manifest file 'bioio.egg-info/SOURCES.txt' 2026-03-26T22:28:00,754 Getting requirements to build wheel: finished with status 'done' 2026-03-26T22:28:00,757 Created temporary directory: /tmp/pip-modern-metadata-1rjgv7f6 2026-03-26T22:28:00,759 Preparing metadata (pyproject.toml): started 2026-03-26T22:28:00,761 Running command Preparing metadata (pyproject.toml) 2026-03-26T22:28:01,432 /tmp/pip-build-env-2vcdnpj5/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-03-26T22:28:01,432 !! 2026-03-26T22:28:01,433 ******************************************************************************** 2026-03-26T22:28:01,434 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-03-26T22:28:01,435 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-03-26T22:28:01,436 or your builds will no longer be supported. 2026-03-26T22:28:01,437 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-26T22:28:01,438 ******************************************************************************** 2026-03-26T22:28:01,439 !! 2026-03-26T22:28:01,439 corresp(dist, value, root_dir) 2026-03-26T22:28:01,515 running dist_info 2026-03-26T22:28:01,528 creating /tmp/pip-modern-metadata-1rjgv7f6/bioio.egg-info 2026-03-26T22:28:01,531 writing /tmp/pip-modern-metadata-1rjgv7f6/bioio.egg-info/PKG-INFO 2026-03-26T22:28:01,538 writing dependency_links to /tmp/pip-modern-metadata-1rjgv7f6/bioio.egg-info/dependency_links.txt 2026-03-26T22:28:01,543 writing requirements to /tmp/pip-modern-metadata-1rjgv7f6/bioio.egg-info/requires.txt 2026-03-26T22:28:01,544 writing top-level names to /tmp/pip-modern-metadata-1rjgv7f6/bioio.egg-info/top_level.txt 2026-03-26T22:28:01,545 writing manifest file '/tmp/pip-modern-metadata-1rjgv7f6/bioio.egg-info/SOURCES.txt' 2026-03-26T22:28:01,581 /tmp/pip-build-env-2vcdnpj5/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-03-26T22:28:01,582 return get_active_overrides().subprocess_timeout 2026-03-26T22:28:01,588 listing git files failed - pretending there aren't any 2026-03-26T22:28:01,593 reading manifest file '/tmp/pip-modern-metadata-1rjgv7f6/bioio.egg-info/SOURCES.txt' 2026-03-26T22:28:01,595 reading manifest template 'MANIFEST.in' 2026-03-26T22:28:01,602 warning: no files found matching '*.toml' under directory 'bioio' 2026-03-26T22:28:01,603 warning: no previously-included files found matching '*/tests' 2026-03-26T22:28:01,604 adding license file 'LICENSE' 2026-03-26T22:28:01,607 writing manifest file '/tmp/pip-modern-metadata-1rjgv7f6/bioio.egg-info/SOURCES.txt' 2026-03-26T22:28:01,608 creating '/tmp/pip-modern-metadata-1rjgv7f6/bioio-3.3.0.dist-info' 2026-03-26T22:28:01,739 Preparing metadata (pyproject.toml): finished with status 'done' 2026-03-26T22:28:01,744 Source in /tmp/pip-wheel-nyg3wk8z/bioio_bc03e494eb52435cb4e63e6eee347e8e has version 3.3.0, which satisfies requirement bioio==3.3.0 from https://files.pythonhosted.org/packages/99/0f/2e6ef1db997626168f618835c87cca34da5c7de6a7a10d19c3f43f342c39/bioio-3.3.0.tar.gz 2026-03-26T22:28:01,745 Removed bioio==3.3.0 from https://files.pythonhosted.org/packages/99/0f/2e6ef1db997626168f618835c87cca34da5c7de6a7a10d19c3f43f342c39/bioio-3.3.0.tar.gz from build tracker '/tmp/pip-build-tracker-vptqk040' 2026-03-26T22:28:01,751 Created temporary directory: /tmp/pip-unpack-a2jteavm 2026-03-26T22:28:01,752 Building wheels for collected packages: bioio 2026-03-26T22:28:01,756 Created temporary directory: /tmp/pip-wheel-lk2sp1nv 2026-03-26T22:28:01,757 Destination directory: /tmp/pip-wheel-lk2sp1nv 2026-03-26T22:28:01,759 Building wheel for bioio (pyproject.toml): started 2026-03-26T22:28:01,760 Running command Building wheel for bioio (pyproject.toml) 2026-03-26T22:28:02,448 /tmp/pip-build-env-2vcdnpj5/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-03-26T22:28:02,449 !! 2026-03-26T22:28:02,450 ******************************************************************************** 2026-03-26T22:28:02,450 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-03-26T22:28:02,451 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-03-26T22:28:02,452 or your builds will no longer be supported. 2026-03-26T22:28:02,453 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-26T22:28:02,454 ******************************************************************************** 2026-03-26T22:28:02,455 !! 2026-03-26T22:28:02,456 corresp(dist, value, root_dir) 2026-03-26T22:28:02,523 running bdist_wheel 2026-03-26T22:28:02,548 running build 2026-03-26T22:28:02,549 running build_py 2026-03-26T22:28:02,551 creating build/lib/docs 2026-03-26T22:28:02,552 copying docs/conf.py -> build/lib/docs 2026-03-26T22:28:02,555 creating build/lib/bioio 2026-03-26T22:28:02,556 copying bioio/plugins.py -> build/lib/bioio 2026-03-26T22:28:02,559 copying bioio/bio_image.py -> build/lib/bioio 2026-03-26T22:28:02,562 copying bioio/array_like_reader.py -> build/lib/bioio 2026-03-26T22:28:02,564 copying bioio/__init__.py -> build/lib/bioio 2026-03-26T22:28:02,566 copying bioio/ome_utils.py -> build/lib/bioio 2026-03-26T22:28:02,569 creating build/lib/bioio/tests 2026-03-26T22:28:02,570 copying bioio/tests/test_writer.py -> build/lib/bioio/tests 2026-03-26T22:28:02,572 copying bioio/tests/test_plugins.py -> build/lib/bioio/tests 2026-03-26T22:28:02,574 copying bioio/tests/conftest.py -> build/lib/bioio/tests 2026-03-26T22:28:02,576 copying bioio/tests/test_array_like_reader.py -> build/lib/bioio/tests 2026-03-26T22:28:02,579 copying bioio/tests/__init__.py -> build/lib/bioio/tests 2026-03-26T22:28:02,581 copying bioio/tests/test_bio_image.py -> build/lib/bioio/tests 2026-03-26T22:28:02,583 creating build/lib/bioio/writers 2026-03-26T22:28:02,584 copying bioio/writers/__init__.py -> build/lib/bioio/writers 2026-03-26T22:28:02,586 creating build/lib/bioio/tests/helpers 2026-03-26T22:28:02,587 copying bioio/tests/helpers/mock_reader.py -> build/lib/bioio/tests/helpers 2026-03-26T22:28:02,589 copying bioio/tests/helpers/mock_writer.py -> build/lib/bioio/tests/helpers 2026-03-26T22:28:02,591 running egg_info 2026-03-26T22:28:02,604 writing bioio.egg-info/PKG-INFO 2026-03-26T22:28:02,611 writing dependency_links to bioio.egg-info/dependency_links.txt 2026-03-26T22:28:02,615 writing requirements to bioio.egg-info/requires.txt 2026-03-26T22:28:02,616 writing top-level names to bioio.egg-info/top_level.txt 2026-03-26T22:28:02,645 /tmp/pip-build-env-2vcdnpj5/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-03-26T22:28:02,646 return get_active_overrides().subprocess_timeout 2026-03-26T22:28:02,652 listing git files failed - pretending there aren't any 2026-03-26T22:28:02,656 reading manifest file 'bioio.egg-info/SOURCES.txt' 2026-03-26T22:28:02,661 reading manifest template 'MANIFEST.in' 2026-03-26T22:28:02,668 warning: no files found matching '*.toml' under directory 'bioio' 2026-03-26T22:28:02,669 warning: no previously-included files found matching '*/tests' 2026-03-26T22:28:02,669 adding license file 'LICENSE' 2026-03-26T22:28:02,673 writing manifest file 'bioio.egg-info/SOURCES.txt' 2026-03-26T22:28:02,679 copying docs/CHANGELOG.rst -> build/lib/docs 2026-03-26T22:28:02,682 copying docs/CODE_OF_CONDUCT.md -> build/lib/docs 2026-03-26T22:28:02,684 copying docs/CONTRIBUTING.md -> build/lib/docs 2026-03-26T22:28:02,686 copying docs/GOVERNANCE.md -> build/lib/docs 2026-03-26T22:28:02,689 copying docs/MIGRATION.md -> build/lib/docs 2026-03-26T22:28:02,691 copying docs/MISSION_AND_VALUES.md -> build/lib/docs 2026-03-26T22:28:02,694 copying docs/OVERVIEW.md -> build/lib/docs 2026-03-26T22:28:02,697 copying docs/api_reference.rst -> build/lib/docs 2026-03-26T22:28:02,699 copying docs/contributing.rst -> build/lib/docs 2026-03-26T22:28:02,702 copying docs/developer_resources.rst -> build/lib/docs 2026-03-26T22:28:02,704 copying docs/index.md -> build/lib/docs 2026-03-26T22:28:02,706 copying docs/installation.rst -> build/lib/docs 2026-03-26T22:28:02,708 copying bioio/py.typed -> build/lib/bioio 2026-03-26T22:28:02,724 installing to build/bdist.linux-armv7l/wheel 2026-03-26T22:28:02,725 running install 2026-03-26T22:28:02,748 running install_lib 2026-03-26T22:28:02,755 creating build/bdist.linux-armv7l/wheel 2026-03-26T22:28:02,757 creating build/bdist.linux-armv7l/wheel/docs 2026-03-26T22:28:02,758 copying build/lib/docs/installation.rst -> build/bdist.linux-armv7l/wheel/./docs 2026-03-26T22:28:02,760 copying build/lib/docs/MISSION_AND_VALUES.md -> build/bdist.linux-armv7l/wheel/./docs 2026-03-26T22:28:02,762 copying build/lib/docs/GOVERNANCE.md -> build/bdist.linux-armv7l/wheel/./docs 2026-03-26T22:28:02,764 copying build/lib/docs/CODE_OF_CONDUCT.md -> build/bdist.linux-armv7l/wheel/./docs 2026-03-26T22:28:02,766 copying build/lib/docs/MIGRATION.md -> build/bdist.linux-armv7l/wheel/./docs 2026-03-26T22:28:02,768 copying build/lib/docs/OVERVIEW.md -> build/bdist.linux-armv7l/wheel/./docs 2026-03-26T22:28:02,770 copying build/lib/docs/conf.py -> build/bdist.linux-armv7l/wheel/./docs 2026-03-26T22:28:02,772 copying build/lib/docs/contributing.rst -> build/bdist.linux-armv7l/wheel/./docs 2026-03-26T22:28:02,774 copying build/lib/docs/CONTRIBUTING.md -> build/bdist.linux-armv7l/wheel/./docs 2026-03-26T22:28:02,776 copying build/lib/docs/developer_resources.rst -> build/bdist.linux-armv7l/wheel/./docs 2026-03-26T22:28:02,777 copying build/lib/docs/CHANGELOG.rst -> build/bdist.linux-armv7l/wheel/./docs 2026-03-26T22:28:02,779 copying build/lib/docs/index.md -> build/bdist.linux-armv7l/wheel/./docs 2026-03-26T22:28:02,780 copying build/lib/docs/api_reference.rst -> build/bdist.linux-armv7l/wheel/./docs 2026-03-26T22:28:02,783 creating build/bdist.linux-armv7l/wheel/bioio 2026-03-26T22:28:02,784 copying build/lib/bioio/plugins.py -> build/bdist.linux-armv7l/wheel/./bioio 2026-03-26T22:28:02,786 copying build/lib/bioio/bio_image.py -> build/bdist.linux-armv7l/wheel/./bioio 2026-03-26T22:28:02,789 copying build/lib/bioio/array_like_reader.py -> build/bdist.linux-armv7l/wheel/./bioio 2026-03-26T22:28:02,792 copying build/lib/bioio/__init__.py -> build/bdist.linux-armv7l/wheel/./bioio 2026-03-26T22:28:02,794 creating build/bdist.linux-armv7l/wheel/bioio/tests 2026-03-26T22:28:02,795 copying build/lib/bioio/tests/test_writer.py -> build/bdist.linux-armv7l/wheel/./bioio/tests 2026-03-26T22:28:02,797 creating build/bdist.linux-armv7l/wheel/bioio/tests/helpers 2026-03-26T22:28:02,798 copying build/lib/bioio/tests/helpers/mock_reader.py -> build/bdist.linux-armv7l/wheel/./bioio/tests/helpers 2026-03-26T22:28:02,801 copying build/lib/bioio/tests/helpers/mock_writer.py -> build/bdist.linux-armv7l/wheel/./bioio/tests/helpers 2026-03-26T22:28:02,803 copying build/lib/bioio/tests/test_plugins.py -> build/bdist.linux-armv7l/wheel/./bioio/tests 2026-03-26T22:28:02,805 copying build/lib/bioio/tests/conftest.py -> build/bdist.linux-armv7l/wheel/./bioio/tests 2026-03-26T22:28:02,806 copying build/lib/bioio/tests/test_array_like_reader.py -> build/bdist.linux-armv7l/wheel/./bioio/tests 2026-03-26T22:28:02,809 copying build/lib/bioio/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./bioio/tests 2026-03-26T22:28:02,811 copying build/lib/bioio/tests/test_bio_image.py -> build/bdist.linux-armv7l/wheel/./bioio/tests 2026-03-26T22:28:02,813 copying build/lib/bioio/py.typed -> build/bdist.linux-armv7l/wheel/./bioio 2026-03-26T22:28:02,814 copying build/lib/bioio/ome_utils.py -> build/bdist.linux-armv7l/wheel/./bioio 2026-03-26T22:28:02,817 creating build/bdist.linux-armv7l/wheel/bioio/writers 2026-03-26T22:28:02,818 copying build/lib/bioio/writers/__init__.py -> build/bdist.linux-armv7l/wheel/./bioio/writers 2026-03-26T22:28:02,819 running install_egg_info 2026-03-26T22:28:02,826 Copying bioio.egg-info to build/bdist.linux-armv7l/wheel/./bioio-3.3.0-py3.11.egg-info 2026-03-26T22:28:02,837 running install_scripts 2026-03-26T22:28:02,846 creating build/bdist.linux-armv7l/wheel/bioio-3.3.0.dist-info/WHEEL 2026-03-26T22:28:02,849 creating '/tmp/pip-wheel-lk2sp1nv/.tmp-c6hxmucc/bioio-3.3.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-03-26T22:28:02,852 adding 'bioio/__init__.py' 2026-03-26T22:28:02,854 adding 'bioio/array_like_reader.py' 2026-03-26T22:28:02,860 adding 'bioio/bio_image.py' 2026-03-26T22:28:02,861 adding 'bioio/ome_utils.py' 2026-03-26T22:28:02,864 adding 'bioio/plugins.py' 2026-03-26T22:28:02,865 adding 'bioio/py.typed' 2026-03-26T22:28:02,867 adding 'bioio/tests/__init__.py' 2026-03-26T22:28:02,868 adding 'bioio/tests/conftest.py' 2026-03-26T22:28:02,870 adding 'bioio/tests/test_array_like_reader.py' 2026-03-26T22:28:02,872 adding 'bioio/tests/test_bio_image.py' 2026-03-26T22:28:02,873 adding 'bioio/tests/test_plugins.py' 2026-03-26T22:28:02,874 adding 'bioio/tests/test_writer.py' 2026-03-26T22:28:02,876 adding 'bioio/tests/helpers/mock_reader.py' 2026-03-26T22:28:02,878 adding 'bioio/tests/helpers/mock_writer.py' 2026-03-26T22:28:02,880 adding 'bioio/writers/__init__.py' 2026-03-26T22:28:02,882 adding 'bioio-3.3.0.dist-info/licenses/LICENSE' 2026-03-26T22:28:02,884 adding 'docs/CHANGELOG.rst' 2026-03-26T22:28:02,885 adding 'docs/CODE_OF_CONDUCT.md' 2026-03-26T22:28:02,886 adding 'docs/CONTRIBUTING.md' 2026-03-26T22:28:02,888 adding 'docs/GOVERNANCE.md' 2026-03-26T22:28:02,889 adding 'docs/MIGRATION.md' 2026-03-26T22:28:02,891 adding 'docs/MISSION_AND_VALUES.md' 2026-03-26T22:28:02,893 adding 'docs/OVERVIEW.md' 2026-03-26T22:28:02,894 adding 'docs/api_reference.rst' 2026-03-26T22:28:02,895 adding 'docs/conf.py' 2026-03-26T22:28:02,896 adding 'docs/contributing.rst' 2026-03-26T22:28:02,897 adding 'docs/developer_resources.rst' 2026-03-26T22:28:02,898 adding 'docs/index.md' 2026-03-26T22:28:02,899 adding 'docs/installation.rst' 2026-03-26T22:28:02,901 adding 'bioio-3.3.0.dist-info/METADATA' 2026-03-26T22:28:02,902 adding 'bioio-3.3.0.dist-info/WHEEL' 2026-03-26T22:28:02,903 adding 'bioio-3.3.0.dist-info/top_level.txt' 2026-03-26T22:28:02,904 adding 'bioio-3.3.0.dist-info/RECORD' 2026-03-26T22:28:02,906 removing build/bdist.linux-armv7l/wheel 2026-03-26T22:28:03,018 Building wheel for bioio (pyproject.toml): finished with status 'done' 2026-03-26T22:28:03,023 Created wheel for bioio: filename=bioio-3.3.0-py3-none-any.whl size=58820 sha256=8164087028c67e9bde9004764bbb15d18f0ff61fdee41dcb321e09e8212ac71a 2026-03-26T22:28:03,024 Stored in directory: /tmp/pip-ephem-wheel-cache-1h8kfkzi/wheels/30/55/71/744faf77331f1a00b2758be8dc96289fb0887a9d28f582820b 2026-03-26T22:28:03,036 Successfully built bioio 2026-03-26T22:28:03,041 Removed build tracker: '/tmp/pip-build-tracker-vptqk040'