2026-03-27T03:01:37,456 Created temporary directory: /tmp/pip-ephem-wheel-cache-od9p0zxj
2026-03-27T03:01:37,458 Created temporary directory: /tmp/pip-build-tracker-4z4qfxi9
2026-03-27T03:01:37,458 Initialized build tracking at /tmp/pip-build-tracker-4z4qfxi9
2026-03-27T03:01:37,459 Created build tracker: /tmp/pip-build-tracker-4z4qfxi9
2026-03-27T03:01:37,459 Entered build tracker: /tmp/pip-build-tracker-4z4qfxi9
2026-03-27T03:01:37,460 Created temporary directory: /tmp/pip-wheel-jtda_a15
2026-03-27T03:01:37,463 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-03-27T03:01:37,465 Created temporary directory: /tmp/pip-ephem-wheel-cache-dm6upuez
2026-03-27T03:01:37,486 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-03-27T03:01:37,490 2 location(s) to search for versions of pipemake:
2026-03-27T03:01:37,490 * https://pypi.org/simple/pipemake/
2026-03-27T03:01:37,490 * https://www.piwheels.org/simple/pipemake/
2026-03-27T03:01:37,491 Fetching project page and analyzing links: https://pypi.org/simple/pipemake/
2026-03-27T03:01:37,491 Getting page https://pypi.org/simple/pipemake/
2026-03-27T03:01:37,493 Found index url https://pypi.org/simple
2026-03-27T03:01:37,796 Fetched page https://pypi.org/simple/pipemake/ as application/vnd.pypi.simple.v1+json
2026-03-27T03:01:37,801   Skipping link: No binaries permitted for pipemake: https://files.pythonhosted.org/packages/85/3c/e85c586f56d02d8d09a521b805e78dc78729a5d6317b4c615461ce4e0a20/pipemake-1.1.6-py3-none-any.whl (from https://pypi.org/simple/pipemake/) (requires-python:>=3.7)
2026-03-27T03:01:37,802   Found link https://files.pythonhosted.org/packages/3c/27/7e6631025005005bb09c009c5dcd23dce7873acb164a96fc878604169221/pipemake-1.1.6.tar.gz (from https://pypi.org/simple/pipemake/) (requires-python:>=3.7), version: 1.1.6
2026-03-27T03:01:37,803   Skipping link: No binaries permitted for pipemake: https://files.pythonhosted.org/packages/9f/5d/fdbeb97d5e01a2eb68f58d5ed1a4d3e287df3df03ee70d32001c8f6d2f92/pipemake-1.2.0-py3-none-any.whl (from https://pypi.org/simple/pipemake/) (requires-python:>=3.7)
2026-03-27T03:01:37,804   Found link https://files.pythonhosted.org/packages/64/ea/98914f85bc5842004e75bc64cc484d95e744589e0b384ab5b087cb237e46/pipemake-1.2.0.tar.gz (from https://pypi.org/simple/pipemake/) (requires-python:>=3.7), version: 1.2.0
2026-03-27T03:01:37,805   Skipping link: No binaries permitted for pipemake: https://files.pythonhosted.org/packages/d0/ac/2d378195629b40d80f65e862e99fbadefd463af034f2c63fa73fe17fe24e/pipemake-1.2.1-py3-none-any.whl (from https://pypi.org/simple/pipemake/) (requires-python:>=3.7)
2026-03-27T03:01:37,806   Found link https://files.pythonhosted.org/packages/93/93/6baec4828f23bad04bb578ed7eb8c90f5d5b0ffe89941f64b844ebbb5cc2/pipemake-1.2.1.tar.gz (from https://pypi.org/simple/pipemake/) (requires-python:>=3.7), version: 1.2.1
2026-03-27T03:01:37,806   Skipping link: No binaries permitted for pipemake: https://files.pythonhosted.org/packages/8f/98/5d0fd76bfc506e40d4573008c88c4af019ca6085ecf0bef5328e4d3a333d/pipemake-1.2.2-py3-none-any.whl (from https://pypi.org/simple/pipemake/) (requires-python:>=3.7)
2026-03-27T03:01:37,807   Found link https://files.pythonhosted.org/packages/10/c5/ce42096a9450a0c2efea83f558bd47441f3f8a85a2cbb910cb9c0dcdb3dc/pipemake-1.2.2.tar.gz (from https://pypi.org/simple/pipemake/) (requires-python:>=3.7), version: 1.2.2
2026-03-27T03:01:37,808   Skipping link: No binaries permitted for pipemake: https://files.pythonhosted.org/packages/48/55/92d35f850b6d6ae6d7a675b39498aeae900d67344c49bb784f997b1414ab/pipemake-1.3.1-py3-none-any.whl (from https://pypi.org/simple/pipemake/) (requires-python:>=3.7)
2026-03-27T03:01:37,809   Found link https://files.pythonhosted.org/packages/aa/13/f9fc4da5f2fbe7116a5ee07d8465050aa3d8243017caed196c9823af09de/pipemake-1.3.1.tar.gz (from https://pypi.org/simple/pipemake/) (requires-python:>=3.7), version: 1.3.1
2026-03-27T03:01:37,810   Skipping link: No binaries permitted for pipemake: https://files.pythonhosted.org/packages/4b/50/751338fa76583706134b98cd9b6fe166759b79436fe77e045a2e686c03b7/pipemake-1.3.2-py3-none-any.whl (from https://pypi.org/simple/pipemake/) (requires-python:>=3.7)
2026-03-27T03:01:37,811   Found link https://files.pythonhosted.org/packages/31/ca/f24ac5a4d14c1f734e992dbefacb37f6b8a3575015a32032fe5e7cd82e4e/pipemake-1.3.2.tar.gz (from https://pypi.org/simple/pipemake/) (requires-python:>=3.7), version: 1.3.2
2026-03-27T03:01:37,812   Skipping link: No binaries permitted for pipemake: https://files.pythonhosted.org/packages/76/01/190bff93d0eb02a882c54d2617257b4e097df2466290e2ee42c1a03592d0/pipemake-1.4.0-py3-none-any.whl (from https://pypi.org/simple/pipemake/) (requires-python:>=3.7)
2026-03-27T03:01:37,813   Found link https://files.pythonhosted.org/packages/b9/75/7ea183d6fb23baddf532daff1c4a8de4cf9c3560cfc4acaf25f01b63abcd/pipemake-1.4.0.tar.gz (from https://pypi.org/simple/pipemake/) (requires-python:>=3.7), version: 1.4.0
2026-03-27T03:01:37,813   Skipping link: No binaries permitted for pipemake: https://files.pythonhosted.org/packages/83/42/c694d605614fb42a181a597d29600bc0dce5a397e6d97458a84467fdb5c9/pipemake-1.4.1-py3-none-any.whl (from https://pypi.org/simple/pipemake/) (requires-python:>=3.7)
2026-03-27T03:01:37,814   Found link https://files.pythonhosted.org/packages/a7/d0/975d78ea56b1233d27a3a28fff4f2ad40ac4f8c5f558a66c0901e2e5f1ff/pipemake-1.4.1.tar.gz (from https://pypi.org/simple/pipemake/) (requires-python:>=3.7), version: 1.4.1
2026-03-27T03:01:37,815   Skipping link: No binaries permitted for pipemake: https://files.pythonhosted.org/packages/63/f3/b5a260abfdfcf3b9ae8cb8790936677b9cee8dea6875f4532204750d76f4/pipemake-1.4.2-py3-none-any.whl (from https://pypi.org/simple/pipemake/) (requires-python:>=3.7)
2026-03-27T03:01:37,815   Found link https://files.pythonhosted.org/packages/0b/be/c0c0b9e3127d404d97198dff02da23374b14f636e69f2cf153c7a323bc75/pipemake-1.4.2.tar.gz (from https://pypi.org/simple/pipemake/) (requires-python:>=3.7), version: 1.4.2
2026-03-27T03:01:37,816   Skipping link: No binaries permitted for pipemake: https://files.pythonhosted.org/packages/1b/e8/541ef6d8418dc0d2c9ed4529beef7eaa8b1e49230b91cbccdb3fb0b1ab33/pipemake-1.4.3-py3-none-any.whl (from https://pypi.org/simple/pipemake/) (requires-python:>=3.7)
2026-03-27T03:01:37,817   Found link https://files.pythonhosted.org/packages/ea/62/1ef047db2fe44c1c498633e819f035fb322fd79b3dbeb80e2e27d5ba61e2/pipemake-1.4.3.tar.gz (from https://pypi.org/simple/pipemake/) (requires-python:>=3.7), version: 1.4.3
2026-03-27T03:01:37,818 Fetching project page and analyzing links: https://www.piwheels.org/simple/pipemake/
2026-03-27T03:01:37,818 Getting page https://www.piwheels.org/simple/pipemake/
2026-03-27T03:01:37,820 Found index url https://www.piwheels.org/simple
2026-03-27T03:01:37,985 Fetched page https://www.piwheels.org/simple/pipemake/ as text/html
2026-03-27T03:01:37,989   Skipping link: No binaries permitted for pipemake: https://www.piwheels.org/simple/pipemake/pipemake-1.4.2-py3-none-any.whl#sha256=7f8968309116b7b6af2a66adaaf520a47c2d60fe5cba67e4b8c6784f357f5132 (from https://www.piwheels.org/simple/pipemake/) (requires-python:>=3.7)
2026-03-27T03:01:37,990   Skipping link: No binaries permitted for pipemake: https://www.piwheels.org/simple/pipemake/pipemake-1.4.1-py3-none-any.whl#sha256=782bf5157649ce518bdd81bf8970c295fa52d24d97539ca993aa8322297ac363 (from https://www.piwheels.org/simple/pipemake/) (requires-python:>=3.7)
2026-03-27T03:01:37,991   Skipping link: No binaries permitted for pipemake: https://www.piwheels.org/simple/pipemake/pipemake-1.4.0-py3-none-any.whl#sha256=236e35770bb8d8159589fb0bca7e220c7ec67c090cd12f539285ef7e6b6815b8 (from https://www.piwheels.org/simple/pipemake/) (requires-python:>=3.7)
2026-03-27T03:01:37,992   Skipping link: No binaries permitted for pipemake: https://archive1.piwheels.org/simple/pipemake/pipemake-1.3.2-py3-none-any.whl#sha256=b1f455e65227cba2b0ccd066d4e3a58f807c228a1c5d23cf97f20ce457fe83cc (from https://www.piwheels.org/simple/pipemake/) (requires-python:>=3.7)
2026-03-27T03:01:37,993   Skipping link: No binaries permitted for pipemake: https://archive1.piwheels.org/simple/pipemake/pipemake-1.3.1-py3-none-any.whl#sha256=128c69c4397832dd2ca1ad2f2129c2473f8af3c78545d96bca0ffc1854d1a50a (from https://www.piwheels.org/simple/pipemake/) (requires-python:>=3.7)
2026-03-27T03:01:37,993   Skipping link: No binaries permitted for pipemake: https://archive1.piwheels.org/simple/pipemake/pipemake-1.2.2-py3-none-any.whl#sha256=6a60ca85f7a952b62e22fc12d78ff9f037652165d1622933685e910c950857c0 (from https://www.piwheels.org/simple/pipemake/) (requires-python:>=3.7)
2026-03-27T03:01:37,994   Skipping link: No binaries permitted for pipemake: https://archive1.piwheels.org/simple/pipemake/pipemake-1.2.1-py3-none-any.whl#sha256=88a4cc17da64bec0ffefcb6cbcaf2984413a414030a104121812a9549e91e2a5 (from https://www.piwheels.org/simple/pipemake/) (requires-python:>=3.7)
2026-03-27T03:01:37,995   Skipping link: No binaries permitted for pipemake: https://archive1.piwheels.org/simple/pipemake/pipemake-1.2.0-py3-none-any.whl#sha256=a967ea444e1752b8462fea812b5d0e808cae4f5797cf42deb53552aeaa23c723 (from https://www.piwheels.org/simple/pipemake/) (requires-python:>=3.7)
2026-03-27T03:01:37,995   Skipping link: No binaries permitted for pipemake: https://archive1.piwheels.org/simple/pipemake/pipemake-1.1.6-py3-none-any.whl#sha256=52cbf72af082547b384938cb5f46a7ce2580584066283da4b7aff7400b9aa4a9 (from https://www.piwheels.org/simple/pipemake/) (requires-python:>=3.7)
2026-03-27T03:01:37,996 Skipping link: not a file: https://www.piwheels.org/simple/pipemake/
2026-03-27T03:01:37,997 Skipping link: not a file: https://pypi.org/simple/pipemake/
2026-03-27T03:01:38,231 Given no hashes to check 1 links for project 'pipemake': discarding no candidates
2026-03-27T03:01:38,252 Collecting pipemake==1.4.3
2026-03-27T03:01:38,255   Created temporary directory: /tmp/pip-unpack-i1bomlez
2026-03-27T03:01:38,429   Downloading pipemake-1.4.3.tar.gz (32 kB)
2026-03-27T03:01:38,512   Added pipemake==1.4.3 from https://files.pythonhosted.org/packages/ea/62/1ef047db2fe44c1c498633e819f035fb322fd79b3dbeb80e2e27d5ba61e2/pipemake-1.4.3.tar.gz to build tracker '/tmp/pip-build-tracker-4z4qfxi9'
2026-03-27T03:01:38,513   Running setup.py (path:/tmp/pip-wheel-jtda_a15/pipemake_e7aaeabe6362443794fc7c82e42ed4ff/setup.py) egg_info for package pipemake
2026-03-27T03:01:38,514   Created temporary directory: /tmp/pip-pip-egg-info-7wr6bpql
2026-03-27T03:01:38,515   Preparing metadata (setup.py): started
2026-03-27T03:01:38,516   Running command python setup.py egg_info
2026-03-27T03:01:39,403   running egg_info
2026-03-27T03:01:39,431   creating /tmp/pip-pip-egg-info-7wr6bpql/pipemake.egg-info
2026-03-27T03:01:39,432   writing /tmp/pip-pip-egg-info-7wr6bpql/pipemake.egg-info/PKG-INFO
2026-03-27T03:01:39,436   writing dependency_links to /tmp/pip-pip-egg-info-7wr6bpql/pipemake.egg-info/dependency_links.txt
2026-03-27T03:01:39,437   writing entry points to /tmp/pip-pip-egg-info-7wr6bpql/pipemake.egg-info/entry_points.txt
2026-03-27T03:01:39,439   writing top-level names to /tmp/pip-pip-egg-info-7wr6bpql/pipemake.egg-info/top_level.txt
2026-03-27T03:01:39,441   writing manifest file '/tmp/pip-pip-egg-info-7wr6bpql/pipemake.egg-info/SOURCES.txt'
2026-03-27T03:01:39,534   reading manifest file '/tmp/pip-pip-egg-info-7wr6bpql/pipemake.egg-info/SOURCES.txt'
2026-03-27T03:01:39,573   adding license file 'LICENSE'
2026-03-27T03:01:39,576   writing manifest file '/tmp/pip-pip-egg-info-7wr6bpql/pipemake.egg-info/SOURCES.txt'
2026-03-27T03:01:39,683   Preparing metadata (setup.py): finished with status 'done'
2026-03-27T03:01:39,687   Source in /tmp/pip-wheel-jtda_a15/pipemake_e7aaeabe6362443794fc7c82e42ed4ff has version 1.4.3, which satisfies requirement pipemake==1.4.3 from https://files.pythonhosted.org/packages/ea/62/1ef047db2fe44c1c498633e819f035fb322fd79b3dbeb80e2e27d5ba61e2/pipemake-1.4.3.tar.gz
2026-03-27T03:01:39,688   Removed pipemake==1.4.3 from https://files.pythonhosted.org/packages/ea/62/1ef047db2fe44c1c498633e819f035fb322fd79b3dbeb80e2e27d5ba61e2/pipemake-1.4.3.tar.gz from build tracker '/tmp/pip-build-tracker-4z4qfxi9'
2026-03-27T03:01:39,693 Created temporary directory: /tmp/pip-unpack-tdarsl3j
2026-03-27T03:01:39,694 Building wheels for collected packages: pipemake
2026-03-27T03:01:39,698   Created temporary directory: /tmp/pip-wheel-p6w44xr6
2026-03-27T03:01:39,699   Building wheel for pipemake (setup.py): started
2026-03-27T03:01:39,700   Destination directory: /tmp/pip-wheel-p6w44xr6
2026-03-27T03:01:39,701   Running command python setup.py bdist_wheel
2026-03-27T03:01:40,543   running bdist_wheel
2026-03-27T03:01:40,682   running build
2026-03-27T03:01:40,682   running build_py
2026-03-27T03:01:40,715   creating build/lib/pipemake
2026-03-27T03:01:40,717   copying pipemake/wildcardIO.py -> build/lib/pipemake
2026-03-27T03:01:40,719   copying pipemake/pipemake.py -> build/lib/pipemake
2026-03-27T03:01:40,721   copying pipemake/singularityIO.py -> build/lib/pipemake
2026-03-27T03:01:40,723   copying pipemake/pipelineIO.py -> build/lib/pipemake
2026-03-27T03:01:40,726   copying pipemake/fileIO.py -> build/lib/pipemake
2026-03-27T03:01:40,728   copying pipemake/processIO.py -> build/lib/pipemake
2026-03-27T03:01:40,730   copying pipemake/parser.py -> build/lib/pipemake
2026-03-27T03:01:40,732   copying pipemake/snakemakeIO.py -> build/lib/pipemake
2026-03-27T03:01:40,736   copying pipemake/pathIO.py -> build/lib/pipemake
2026-03-27T03:01:40,738   copying pipemake/__init__.py -> build/lib/pipemake
2026-03-27T03:01:40,739   copying pipemake/logger.py -> build/lib/pipemake
2026-03-27T03:01:40,769   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2026-03-27T03:01:40,770   !!

2026-03-27T03:01:40,771           ********************************************************************************
2026-03-27T03:01:40,772           Please avoid running ``setup.py`` directly.
2026-03-27T03:01:40,772           Instead, use pypa/build, pypa/installer or other
2026-03-27T03:01:40,773           standards-based tools.

2026-03-27T03:01:40,774           This deprecation is overdue, please update your project and remove deprecated
2026-03-27T03:01:40,775           calls to avoid build errors in the future.

2026-03-27T03:01:40,777           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2026-03-27T03:01:40,778           ********************************************************************************

2026-03-27T03:01:40,780   !!
2026-03-27T03:01:40,781     self.initialize_options()
2026-03-27T03:01:40,802   installing to build/bdist.linux-armv7l/wheel
2026-03-27T03:01:40,803   running install
2026-03-27T03:01:40,827   running install_lib
2026-03-27T03:01:40,868   creating build/bdist.linux-armv7l/wheel
2026-03-27T03:01:40,875   creating build/bdist.linux-armv7l/wheel/pipemake
2026-03-27T03:01:40,879   copying build/lib/pipemake/wildcardIO.py -> build/bdist.linux-armv7l/wheel/./pipemake
2026-03-27T03:01:40,887   copying build/lib/pipemake/pipemake.py -> build/bdist.linux-armv7l/wheel/./pipemake
2026-03-27T03:01:40,893   copying build/lib/pipemake/singularityIO.py -> build/bdist.linux-armv7l/wheel/./pipemake
2026-03-27T03:01:40,898   copying build/lib/pipemake/pipelineIO.py -> build/bdist.linux-armv7l/wheel/./pipemake
2026-03-27T03:01:41,114   copying build/lib/pipemake/fileIO.py -> build/bdist.linux-armv7l/wheel/./pipemake
2026-03-27T03:01:41,117   copying build/lib/pipemake/processIO.py -> build/bdist.linux-armv7l/wheel/./pipemake
2026-03-27T03:01:41,119   copying build/lib/pipemake/parser.py -> build/bdist.linux-armv7l/wheel/./pipemake
2026-03-27T03:01:41,122   copying build/lib/pipemake/snakemakeIO.py -> build/bdist.linux-armv7l/wheel/./pipemake
2026-03-27T03:01:41,127   copying build/lib/pipemake/pathIO.py -> build/bdist.linux-armv7l/wheel/./pipemake
2026-03-27T03:01:41,130   copying build/lib/pipemake/__init__.py -> build/bdist.linux-armv7l/wheel/./pipemake
2026-03-27T03:01:41,132   copying build/lib/pipemake/logger.py -> build/bdist.linux-armv7l/wheel/./pipemake
2026-03-27T03:01:41,134   running install_egg_info
2026-03-27T03:01:41,169   running egg_info
2026-03-27T03:01:41,207   writing pipemake.egg-info/PKG-INFO
2026-03-27T03:01:41,212   writing dependency_links to pipemake.egg-info/dependency_links.txt
2026-03-27T03:01:41,214   writing entry points to pipemake.egg-info/entry_points.txt
2026-03-27T03:01:41,216   deleting pipemake.egg-info/requires.txt
2026-03-27T03:01:41,217   writing top-level names to pipemake.egg-info/top_level.txt
2026-03-27T03:01:41,260   reading manifest file 'pipemake.egg-info/SOURCES.txt'
2026-03-27T03:01:41,265   adding license file 'LICENSE'
2026-03-27T03:01:41,270   writing manifest file 'pipemake.egg-info/SOURCES.txt'
2026-03-27T03:01:41,272   Copying pipemake.egg-info to build/bdist.linux-armv7l/wheel/./pipemake-1.4.3-py3.11.egg-info
2026-03-27T03:01:41,282   running install_scripts
2026-03-27T03:01:41,297   creating build/bdist.linux-armv7l/wheel/pipemake-1.4.3.dist-info/WHEEL
2026-03-27T03:01:41,299   creating '/tmp/pip-wheel-p6w44xr6/pipemake-1.4.3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2026-03-27T03:01:41,302   adding 'pipemake/__init__.py'
2026-03-27T03:01:41,304   adding 'pipemake/fileIO.py'
2026-03-27T03:01:41,306   adding 'pipemake/logger.py'
2026-03-27T03:01:41,308   adding 'pipemake/parser.py'
2026-03-27T03:01:41,310   adding 'pipemake/pathIO.py'
2026-03-27T03:01:41,313   adding 'pipemake/pipelineIO.py'
2026-03-27T03:01:41,315   adding 'pipemake/pipemake.py'
2026-03-27T03:01:41,316   adding 'pipemake/processIO.py'
2026-03-27T03:01:41,318   adding 'pipemake/singularityIO.py'
2026-03-27T03:01:41,324   adding 'pipemake/snakemakeIO.py'
2026-03-27T03:01:41,326   adding 'pipemake/wildcardIO.py'
2026-03-27T03:01:41,329   adding 'pipemake-1.4.3.dist-info/licenses/LICENSE'
2026-03-27T03:01:41,331   adding 'pipemake-1.4.3.dist-info/METADATA'
2026-03-27T03:01:41,333   adding 'pipemake-1.4.3.dist-info/WHEEL'
2026-03-27T03:01:41,334   adding 'pipemake-1.4.3.dist-info/entry_points.txt'
2026-03-27T03:01:41,336   adding 'pipemake-1.4.3.dist-info/top_level.txt'
2026-03-27T03:01:41,337   adding 'pipemake-1.4.3.dist-info/RECORD'
2026-03-27T03:01:41,339   removing build/bdist.linux-armv7l/wheel
2026-03-27T03:01:41,459   Building wheel for pipemake (setup.py): finished with status 'done'
2026-03-27T03:01:41,463   Created wheel for pipemake: filename=pipemake-1.4.3-py3-none-any.whl size=28634 sha256=e9acd14da57e73b06eaa865958939c7b5faa94bb52c2a9352ba12fe8e3683caf
2026-03-27T03:01:41,464   Stored in directory: /tmp/pip-ephem-wheel-cache-dm6upuez/wheels/ae/b8/9a/0e10f6ccf950dba10fbc6e2a54c26a3b5f99695e46e5b651e1
2026-03-27T03:01:41,476 Successfully built pipemake
2026-03-27T03:01:41,481 Removed build tracker: '/tmp/pip-build-tracker-4z4qfxi9'