2026-03-27T08:13:01,222 Created temporary directory: /tmp/pip-ephem-wheel-cache-tq6azgsz 2026-03-27T08:13:01,224 Created temporary directory: /tmp/pip-build-tracker-w5sdsxxt 2026-03-27T08:13:01,224 Initialized build tracking at /tmp/pip-build-tracker-w5sdsxxt 2026-03-27T08:13:01,225 Created build tracker: /tmp/pip-build-tracker-w5sdsxxt 2026-03-27T08:13:01,225 Entered build tracker: /tmp/pip-build-tracker-w5sdsxxt 2026-03-27T08:13:01,226 Created temporary directory: /tmp/pip-wheel-wm75wad0 2026-03-27T08:13:01,229 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-03-27T08:13:01,231 Created temporary directory: /tmp/pip-ephem-wheel-cache-rvo7584q 2026-03-27T08:13:01,254 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-03-27T08:13:01,257 2 location(s) to search for versions of ms2deepscore: 2026-03-27T08:13:01,257 * https://pypi.org/simple/ms2deepscore/ 2026-03-27T08:13:01,257 * https://www.piwheels.org/simple/ms2deepscore/ 2026-03-27T08:13:01,258 Fetching project page and analyzing links: https://pypi.org/simple/ms2deepscore/ 2026-03-27T08:13:01,259 Getting page https://pypi.org/simple/ms2deepscore/ 2026-03-27T08:13:01,260 Found index url https://pypi.org/simple 2026-03-27T08:13:01,486 Fetched page https://pypi.org/simple/ms2deepscore/ as application/vnd.pypi.simple.v1+json 2026-03-27T08:13:01,497 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/1a/74/3811b05bbe009bc9c96f2fbb4f45faad6d8412c862076677775aa9cd732c/ms2deepscore-0.1.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7) 2026-03-27T08:13:01,498 Found link https://files.pythonhosted.org/packages/03/2a/45ece91185f3304a1b05a8c82a54fdf956b19ff4702860d0446c4f33634c/ms2deepscore-0.1.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7), version: 0.1.0 2026-03-27T08:13:01,499 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/58/25/baead1a09c641cf9294c4ecbd0546957d58ec5c6dc551171f67a3e51c2a9/ms2deepscore-0.1.1-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7) 2026-03-27T08:13:01,500 Found link https://files.pythonhosted.org/packages/5f/8f/bc16f5973b58bc959da0949523355288fa484163032307fc632c771870a2/ms2deepscore-0.1.1.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7), version: 0.1.1 2026-03-27T08:13:01,501 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/3e/8e/b27fd7655be965286f69fe43bc7c4ecb0329951dfc3bb682ac69244de902/ms2deepscore-0.1.2-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7) 2026-03-27T08:13:01,502 Found link https://files.pythonhosted.org/packages/d0/0e/2c0b8614641c63ed003a2091cd2a727deb2787ae164b41bbdb47ebdcf5b7/ms2deepscore-0.1.2.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7), version: 0.1.2 2026-03-27T08:13:01,503 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/fc/e0/a60f69b0ce0da6ec06026a701ffcf4a5514cf7f24b7e2d5539beae9a70bf/ms2deepscore-0.1.3-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7) 2026-03-27T08:13:01,504 Found link https://files.pythonhosted.org/packages/fb/60/3afc84d1e1bebd7dbb79e41396ef324fff01119cb52c39a5350319bc23e7/ms2deepscore-0.1.3.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7), version: 0.1.3 2026-03-27T08:13:01,504 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/95/c5/3a40a446c30181e38baa0255dcf15be37bbdb67aab0edb9bfff4516c863d/ms2deepscore-0.2.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7) 2026-03-27T08:13:01,505 Found link https://files.pythonhosted.org/packages/e3/ef/388b820259bd6edf0149ff9a555fad6545244e0c45d68ff42848be3d7c6b/ms2deepscore-0.2.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7), version: 0.2.0 2026-03-27T08:13:01,506 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/0e/83/ceea507b050aac37fff3e115c5ee2204eda6440e209a2f4dee7ef0775495/ms2deepscore-0.2.1-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7) 2026-03-27T08:13:01,507 Found link https://files.pythonhosted.org/packages/4a/b6/fcf3e9299040ae35bb80304cc13c649720f9b851e89012e6017a54dd1618/ms2deepscore-0.2.1.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7), version: 0.2.1 2026-03-27T08:13:01,508 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/d0/20/4f0bec692f58860eff0ef96c21cd513a06ec0c42f3a105ac5c791127fbf7/ms2deepscore-0.2.2-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7) 2026-03-27T08:13:01,509 Found link https://files.pythonhosted.org/packages/46/2b/2dbcb55ba0e5a76c6617b06faa5199abf106254a95499469d20d906786a8/ms2deepscore-0.2.2.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7), version: 0.2.2 2026-03-27T08:13:01,509 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/c2/a1/8f203ac512a44c46eff2f3956678bd0a2266c73f261f69d168d44a4844b6/ms2deepscore-0.2.3-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7) 2026-03-27T08:13:01,510 Found link https://files.pythonhosted.org/packages/fa/ad/bb478c564a8d0b9b729a60c0eb8b7d8e4297144d781d7a5d0777709e656f/ms2deepscore-0.2.3.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7), version: 0.2.3 2026-03-27T08:13:01,511 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/0e/83/d6618132d96d30ff18d6312e478bc65167919ca985e8530e1bfc9e1b6ab0/ms2deepscore-0.3.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7) 2026-03-27T08:13:01,511 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/c1/b4/582f0f136321e1441c8e9ad72300f365b432f495df5552a892e5eac3cf51/ms2deepscore-0.3.0.1-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7) 2026-03-27T08:13:01,512 Found link https://files.pythonhosted.org/packages/e8/92/04692dbbb4fb9b85f85237e7eb35dbf17dc6afd4045f4e24da63ac18ac45/ms2deepscore-0.3.0.1.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7), version: 0.3.0.1 2026-03-27T08:13:01,513 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/73/31/eaa5bde2046120474c4d717afac0f5ab88ff83befac95ab5e98931c79421/ms2deepscore-0.3.1-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7) 2026-03-27T08:13:01,514 Found link https://files.pythonhosted.org/packages/dd/d7/d4970ef86e3d5fd31d66eec3ffafcf8fb9b2a7272cfd220559628556159d/ms2deepscore-0.3.1.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7), version: 0.3.1 2026-03-27T08:13:01,515 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/b7/81/e956a390e9f80855be4e45b6755df79637b8440fb8ae96e852948dcc34b0/ms2deepscore-0.4.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.8) 2026-03-27T08:13:01,515 Found link https://files.pythonhosted.org/packages/8e/60/3d6b1ff9f4364083d9854bb090e3b2ffaacaa018985a14990a03e8a31bab/ms2deepscore-0.4.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.8), version: 0.4.0 2026-03-27T08:13:01,516 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/e3/87/cc2d5f537e0fe3c05be45b0e9b1b73a91365bb5f600040f2f3b6dd601e95/ms2deepscore-0.5.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.8) 2026-03-27T08:13:01,517 Found link https://files.pythonhosted.org/packages/de/e7/b0f2a802ff398551c3ed9d8980e52139fded44b2cfa73d4e5fdc05bedeb5/ms2deepscore-0.5.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.8), version: 0.5.0 2026-03-27T08:13:01,518 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/34/c9/c96bc9efbc9bf1e6cd7eef199031487c66cac573a150b9ab6b9714752d3f/ms2deepscore-1.0.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.8) 2026-03-27T08:13:01,519 Found link https://files.pythonhosted.org/packages/95/24/832e3b4b5bab0842a56babde588f073dfa3283891dac80c46ae04b8b509e/ms2deepscore-1.0.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.8), version: 1.0.0 2026-03-27T08:13:01,520 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/10/04/39bf5d75af583ee81e5e0b9c240b3c553866c174c42577006c84f22b4916/ms2deepscore-2.0.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9) 2026-03-27T08:13:01,520 Found link https://files.pythonhosted.org/packages/06/6e/f31d145163172ba5aa08e5aef54dc0033ba3a0a2f211597b875c28b12159/ms2deepscore-2.0.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9), version: 2.0.0 2026-03-27T08:13:01,521 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/74/e5/efc479e898364a2a76f4c555ae331ba839efbf186f5a12ea71fbfbc16694/ms2deepscore-2.1.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9) 2026-03-27T08:13:01,522 Found link https://files.pythonhosted.org/packages/be/56/ee906d7f39c9d0250ae3f8d434b707e18df28676db9a0d4acb169f0bca1b/ms2deepscore-2.1.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9), version: 2.1.0 2026-03-27T08:13:01,522 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/c6/48/f25c49217e18d41f8a9f88c8d212ac471ce0f85018fd52412727cab6896f/ms2deepscore-2.2.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9) 2026-03-27T08:13:01,523 Found link https://files.pythonhosted.org/packages/28/3c/e3ee8e79bc13c7ec1b0c73c8e203bef2aa8217a53da52789e267c3000c87/ms2deepscore-2.2.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9), version: 2.2.0 2026-03-27T08:13:01,524 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/16/bd/7ee1932266bcb9cd5d4d820d06172eab9475c13595c4c728b06b04593e18/ms2deepscore-2.3.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9) 2026-03-27T08:13:01,525 Found link https://files.pythonhosted.org/packages/5c/48/4c0c1bf8bd30607c86dcc4e91f9dd7cc8fdcf313a65147c20e9b6caff3f6/ms2deepscore-2.3.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9), version: 2.3.0 2026-03-27T08:13:01,526 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/0b/98/ea31a4171e871dbaf9895812c7260275c0aa6bbd90bbbdc49072901be91b/ms2deepscore-2.4.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9) 2026-03-27T08:13:01,527 Found link https://files.pythonhosted.org/packages/5b/d6/7a057704de6b1fd5b07570d2786df1c83c8eef1d116f116d07e77e5773cd/ms2deepscore-2.4.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9), version: 2.4.0 2026-03-27T08:13:01,527 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/6f/9e/4606fa9cb440af1967ba8d5c1983615a5d787a0f6c609344c466ff6596e1/ms2deepscore-2.5.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9) 2026-03-27T08:13:01,528 Found link https://files.pythonhosted.org/packages/e8/00/e0bdc31d6130df56c9473650b089c3c1916317bd4c1f2fde6643a5642c1a/ms2deepscore-2.5.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9), version: 2.5.0 2026-03-27T08:13:01,529 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/27/0b/37c7fc9604887e78a5f8e8451b09ebb00264f91b70d1d06f4400837acf1a/ms2deepscore-2.5.1-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9) 2026-03-27T08:13:01,530 Found link https://files.pythonhosted.org/packages/c3/9d/0280da91f94b39480f2608501559b3d5609aab8d09962eefd0dde4960178/ms2deepscore-2.5.1.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9), version: 2.5.1 2026-03-27T08:13:01,531 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/34/1e/3d387308ad174819078b65f5e4ff5ebab0e4e703da037b805a1e5540633b/ms2deepscore-2.5.2-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.10) 2026-03-27T08:13:01,531 Found link https://files.pythonhosted.org/packages/85/c3/baed91f8d85eafcb1987b11561811bb907442a3e5fbe9a4c7ebb74fc7655/ms2deepscore-2.5.2.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.10), version: 2.5.2 2026-03-27T08:13:01,532 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/a2/95/c3bfdaffbb06fa1bf23a680a44961aef2b345f01d5b0773c20970ee79aa5/ms2deepscore-2.5.3-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.10) 2026-03-27T08:13:01,533 Found link https://files.pythonhosted.org/packages/c9/42/047b712c6649021d42ff4d04ad47f6bb0df4bbb89d42bb2ec2b29248cc7c/ms2deepscore-2.5.3.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.10), version: 2.5.3 2026-03-27T08:13:01,533 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/f3/07/01bb4fd4d3575cc7f9c2be26efb5aa5861e012bba606566df81def2dead7/ms2deepscore-2.5.4-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.10) 2026-03-27T08:13:01,534 Found link https://files.pythonhosted.org/packages/18/42/f693e562f9e0f26c45d021c4ed912fac373ef6e9ed13ee70eb2c670e5777/ms2deepscore-2.5.4.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.10), version: 2.5.4 2026-03-27T08:13:01,535 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/4e/44/58ddfc2ba407e12d3679d09fffc5f3b1787bb1ac3f048301125ab7266c2d/ms2deepscore-2.5.5-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.10) 2026-03-27T08:13:01,536 Found link https://files.pythonhosted.org/packages/5c/bc/3b2085f38be2c9a1f0c636167fde65d8a5d191e2ff16871498b68b50b839/ms2deepscore-2.5.5.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.10), version: 2.5.5 2026-03-27T08:13:01,537 Skipping link: No binaries permitted for ms2deepscore: 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version: 2.7.0 2026-03-27T08:13:01,540 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/e4/7d/f08553fd823b44bc01bbedcf298257e147d303ec6a366d4fdb503de36592/ms2deepscore-2.7.1-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.10) 2026-03-27T08:13:01,541 Found link https://files.pythonhosted.org/packages/47/07/4dda15cdb1ce9bfc3e95ae0e2dc4d87c74271e51a0cf28747456e5a7536c/ms2deepscore-2.7.1.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.10), version: 2.7.1 2026-03-27T08:13:01,542 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/fc/aa/bc0723eb2bca0bd979257ea8da5cd7fa23ac67126865d4439acd639bcff1/ms2deepscore-2.7.2-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.10) 2026-03-27T08:13:01,542 Found link https://files.pythonhosted.org/packages/04/36/ff7ec6e470824e2c6adce30744cd84b373f9628cfa6bbc727598f5beb28f/ms2deepscore-2.7.2.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.10), version: 2.7.2 2026-03-27T08:13:01,543 Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/2b/06/0c4fe09951ffa4d0e73d93b91ea606cf0443cbc6d8f429495dde99f57769/ms2deepscore-2.8.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.11) 2026-03-27T08:13:01,544 Found link https://files.pythonhosted.org/packages/2b/65/b7698151f14a11c035fb9a88bcdb67af8ef41a43299c2ac006cba3fbbe49/ms2deepscore-2.8.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.11), version: 2.8.0 2026-03-27T08:13:01,545 Fetching project page and analyzing links: https://www.piwheels.org/simple/ms2deepscore/ 2026-03-27T08:13:01,545 Getting page https://www.piwheels.org/simple/ms2deepscore/ 2026-03-27T08:13:01,546 Found index url https://www.piwheels.org/simple 2026-03-27T08:13:01,718 Fetched page https://www.piwheels.org/simple/ms2deepscore/ as text/html 2026-03-27T08:13:01,727 Skipping link: No binaries permitted for ms2deepscore: https://www.piwheels.org/simple/ms2deepscore/ms2deepscore-2.7.2-py3-none-any.whl#sha256=f3be8b11320044c4e7b8c51d145537c7c376c5847022171cbaba25df629ec83c (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.10) 2026-03-27T08:13:01,728 Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-2.7.1-py3-none-any.whl#sha256=39700ea3ef951451ebe27b55df1cfca4a3b0628a3fe69311da0d44a6cfe4f3a8 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.10) 2026-03-27T08:13:01,729 Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-2.7.0-py3-none-any.whl#sha256=ef46dd0a8a16f444040c0dcf4cd0b21fb1a22a101ee41c355fd1316b85ead684 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.10) 2026-03-27T08:13:01,729 Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-2.6.0-py3-none-any.whl#sha256=9a78357b30b1f66c78e2426f0055b5bdab98a662696dd8be22546590d42b36ea (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.10) 2026-03-27T08:13:01,730 Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-2.5.5-py3-none-any.whl#sha256=17bc0980f0bba9f828d8709c67150329d606172da2c73c956c23c6a39d2e1c74 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.10) 2026-03-27T08:13:01,730 Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-2.5.4-py3-none-any.whl#sha256=002f794c7b44a7d2349ce30d32816b60c474cb6458ad5c9d8019e10984c007b6 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.10) 2026-03-27T08:13:01,731 Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-2.5.3-py3-none-any.whl#sha256=6d187f5bbee54836722169cb7acfd9e0c49f3dd456c63d9aadd0274566b36d2b (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.10) 2026-03-27T08:13:01,732 Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-2.5.2-py3-none-any.whl#sha256=387165f52dd2bb36b532948a338ea06627aa070ec10682b97448d8519f3b7685 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.10) 2026-03-27T08:13:01,732 Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-2.5.1-py3-none-any.whl#sha256=139c9ddd1e12b321e42e5ab7703b3519dfe01b3253824b2c263348394e3125b5 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.9) 2026-03-27T08:13:01,733 Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-2.5.0-py3-none-any.whl#sha256=95ba003ee0680b0c8092e726bef8645a6a216daaf3c15981805b8c5320bf8711 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.9) 2026-03-27T08:13:01,733 Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-2.4.0-py3-none-any.whl#sha256=543ec87b7ae5afb745ab9b1bcffe5f5009dc26a353bd02ba770cbe6291f82197 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.9) 2026-03-27T08:13:01,734 Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-2.3.0-py3-none-any.whl#sha256=8b9c029307a76ba41d0fcb5e9ddc6c74cb8ebaf8219556a0a642adc9a1174204 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.9) 2026-03-27T08:13:01,734 Skipping link: No binaries permitted for ms2deepscore: 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https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-0.1.3-py3-none-any.whl#sha256=df545be42698ceb35be27f6433fc886881199eab6f892d80a3017aee1031d2d4 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.7) 2026-03-27T08:13:01,742 Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-0.1.2-py3-none-any.whl#sha256=f16ecfa3272a9106b49f9960b5ef6f44bbe1efd490e63d1299b29626ad0aba39 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.7) 2026-03-27T08:13:01,742 Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-0.1.1-py3-none-any.whl#sha256=60659f71513a0c31262d829d579ac9ea0fe7419d028a4b2948c240d9bc68af8c (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.7) 2026-03-27T08:13:01,742 Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-0.1.0-py3-none-any.whl#sha256=2b61bbfded0320134ac06106688abcc249c3fb70ded487bc955e70d27218cf3b (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.7) 2026-03-27T08:13:01,743 Skipping link: not a file: https://www.piwheels.org/simple/ms2deepscore/ 2026-03-27T08:13:01,744 Skipping link: not a file: https://pypi.org/simple/ms2deepscore/ 2026-03-27T08:13:01,766 Given no hashes to check 1 links for project 'ms2deepscore': discarding no candidates 2026-03-27T08:13:01,784 Collecting ms2deepscore==2.8.0 2026-03-27T08:13:01,787 Created temporary directory: /tmp/pip-unpack-w7kkwaqg 2026-03-27T08:13:01,937 Downloading ms2deepscore-2.8.0.tar.gz (84 kB) 2026-03-27T08:13:02,157 Added ms2deepscore==2.8.0 from https://files.pythonhosted.org/packages/2b/65/b7698151f14a11c035fb9a88bcdb67af8ef41a43299c2ac006cba3fbbe49/ms2deepscore-2.8.0.tar.gz to build tracker '/tmp/pip-build-tracker-w5sdsxxt' 2026-03-27T08:13:02,158 Running setup.py (path:/tmp/pip-wheel-wm75wad0/ms2deepscore_b083a47e41e3439887204a639aa78315/setup.py) egg_info for package ms2deepscore 2026-03-27T08:13:02,159 Created temporary directory: /tmp/pip-pip-egg-info-6tpk__ts 2026-03-27T08:13:02,160 Preparing metadata (setup.py): started 2026-03-27T08:13:02,161 Running command python setup.py egg_info 2026-03-27T08:13:02,749 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:287: UserWarning: Unknown distribution option: 'test_suite' 2026-03-27T08:13:02,750 warnings.warn(msg) 2026-03-27T08:13:03,082 running egg_info 2026-03-27T08:13:03,108 creating /tmp/pip-pip-egg-info-6tpk__ts/ms2deepscore.egg-info 2026-03-27T08:13:03,109 writing /tmp/pip-pip-egg-info-6tpk__ts/ms2deepscore.egg-info/PKG-INFO 2026-03-27T08:13:03,116 writing dependency_links to /tmp/pip-pip-egg-info-6tpk__ts/ms2deepscore.egg-info/dependency_links.txt 2026-03-27T08:13:03,120 writing requirements to /tmp/pip-pip-egg-info-6tpk__ts/ms2deepscore.egg-info/requires.txt 2026-03-27T08:13:03,121 writing top-level names to /tmp/pip-pip-egg-info-6tpk__ts/ms2deepscore.egg-info/top_level.txt 2026-03-27T08:13:03,122 writing manifest file '/tmp/pip-pip-egg-info-6tpk__ts/ms2deepscore.egg-info/SOURCES.txt' 2026-03-27T08:13:03,218 reading manifest file '/tmp/pip-pip-egg-info-6tpk__ts/ms2deepscore.egg-info/SOURCES.txt' 2026-03-27T08:13:03,219 adding license file 'LICENSE' 2026-03-27T08:13:03,223 writing manifest file '/tmp/pip-pip-egg-info-6tpk__ts/ms2deepscore.egg-info/SOURCES.txt' 2026-03-27T08:13:03,330 Preparing metadata (setup.py): finished with status 'done' 2026-03-27T08:13:03,334 Source in /tmp/pip-wheel-wm75wad0/ms2deepscore_b083a47e41e3439887204a639aa78315 has version 2.8.0, which satisfies requirement ms2deepscore==2.8.0 from https://files.pythonhosted.org/packages/2b/65/b7698151f14a11c035fb9a88bcdb67af8ef41a43299c2ac006cba3fbbe49/ms2deepscore-2.8.0.tar.gz 2026-03-27T08:13:03,335 Removed ms2deepscore==2.8.0 from https://files.pythonhosted.org/packages/2b/65/b7698151f14a11c035fb9a88bcdb67af8ef41a43299c2ac006cba3fbbe49/ms2deepscore-2.8.0.tar.gz from build tracker '/tmp/pip-build-tracker-w5sdsxxt' 2026-03-27T08:13:03,342 Created temporary directory: /tmp/pip-unpack-8m0mxz1w 2026-03-27T08:13:03,342 Building wheels for collected packages: ms2deepscore 2026-03-27T08:13:03,346 Created temporary directory: /tmp/pip-wheel-v9bbjnrr 2026-03-27T08:13:03,347 Building wheel for ms2deepscore (setup.py): started 2026-03-27T08:13:03,348 Destination directory: /tmp/pip-wheel-v9bbjnrr 2026-03-27T08:13:03,349 Running command python setup.py bdist_wheel 2026-03-27T08:13:04,095 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:287: UserWarning: Unknown distribution option: 'test_suite' 2026-03-27T08:13:04,096 warnings.warn(msg) 2026-03-27T08:13:04,390 running bdist_wheel 2026-03-27T08:13:04,519 running build 2026-03-27T08:13:04,519 running build_py 2026-03-27T08:13:04,552 creating build/lib/ms2deepscore 2026-03-27T08:13:04,554 copying ms2deepscore/SettingsMS2Deepscore.py -> build/lib/ms2deepscore 2026-03-27T08:13:04,556 copying ms2deepscore/__version__.py -> build/lib/ms2deepscore 2026-03-27T08:13:04,558 copying ms2deepscore/MS2DeepScoreEvaluated.py -> build/lib/ms2deepscore 2026-03-27T08:13:04,560 copying ms2deepscore/utils.py -> build/lib/ms2deepscore 2026-03-27T08:13:04,563 copying ms2deepscore/fingerprint_utils.py -> build/lib/ms2deepscore 2026-03-27T08:13:04,565 copying ms2deepscore/__init__.py -> build/lib/ms2deepscore 2026-03-27T08:13:04,566 copying ms2deepscore/MetadataFeatureGenerator.py -> build/lib/ms2deepscore 2026-03-27T08:13:04,569 copying ms2deepscore/MS2DeepScore.py -> build/lib/ms2deepscore 2026-03-27T08:13:04,571 copying ms2deepscore/tensorize_spectra.py -> build/lib/ms2deepscore 2026-03-27T08:13:04,573 copying ms2deepscore/vector_operations.py -> build/lib/ms2deepscore 2026-03-27T08:13:04,576 creating build/lib/tests 2026-03-27T08:13:04,577 copying tests/test_vector_operations.py -> build/lib/tests 2026-03-27T08:13:04,580 copying tests/test_fingerprint_utils.py -> build/lib/tests 2026-03-27T08:13:04,582 copying tests/test_plotting.py -> build/lib/tests 2026-03-27T08:13:04,584 copying tests/test_embedding_evaluator.py -> build/lib/tests 2026-03-27T08:13:04,586 copying tests/test_loss_functions.py -> build/lib/tests 2026-03-27T08:13:04,588 copying tests/test_data_augmentation.py -> build/lib/tests 2026-03-27T08:13:04,590 copying tests/test_training_wrapper_function.py -> build/lib/tests 2026-03-27T08:13:04,592 copying tests/test_train_ms2deepscore.py -> build/lib/tests 2026-03-27T08:13:04,594 copying tests/create_test_spectra.py -> build/lib/tests 2026-03-27T08:13:04,596 copying tests/__init__.py -> build/lib/tests 2026-03-27T08:13:04,598 copying tests/test_CalculateScoresBetweenAllIonmodes.py -> build/lib/tests 2026-03-27T08:13:04,600 copying tests/test_validation_and_test_split.py -> build/lib/tests 2026-03-27T08:13:04,602 copying tests/test_MetadataFeatureGenerator.py -> build/lib/tests 2026-03-27T08:13:04,603 copying tests/test_validation_loss_calculator.py -> build/lib/tests 2026-03-27T08:13:04,605 copying tests/test_PredictionsAndTanimotoScores.py -> build/lib/tests 2026-03-27T08:13:04,607 copying tests/test_ms2deepscore_evaluated.py -> build/lib/tests 2026-03-27T08:13:04,609 copying tests/test_SettingsMS2deepscore.py -> build/lib/tests 2026-03-27T08:13:04,611 copying tests/test_inchikey_pair_selection.py -> build/lib/tests 2026-03-27T08:13:04,614 copying tests/test_utils.py -> build/lib/tests 2026-03-27T08:13:04,616 copying tests/test_calculate_scores_for_validation.py -> build/lib/tests 2026-03-27T08:13:04,618 copying tests/test_ms2deepscore.py -> build/lib/tests 2026-03-27T08:13:04,620 copying tests/test_converter_legacy.py -> build/lib/tests 2026-03-27T08:13:04,622 copying tests/test_data_generators.py -> build/lib/tests 2026-03-27T08:13:04,625 copying tests/test_load_model.py -> build/lib/tests 2026-03-27T08:13:04,628 copying tests/test_siamese_spectra_model.py -> build/lib/tests 2026-03-27T08:13:04,631 creating build/lib/ms2deepscore/models 2026-03-27T08:13:04,632 copying ms2deepscore/models/__model_format__.py -> build/lib/ms2deepscore/models 2026-03-27T08:13:04,635 copying ms2deepscore/models/legacy_model_converter.py -> build/lib/ms2deepscore/models 2026-03-27T08:13:04,637 copying ms2deepscore/models/io_utils.py -> build/lib/ms2deepscore/models 2026-03-27T08:13:04,639 copying ms2deepscore/models/helper_functions.py -> build/lib/ms2deepscore/models 2026-03-27T08:13:04,641 copying ms2deepscore/models/__init__.py -> build/lib/ms2deepscore/models 2026-03-27T08:13:04,642 copying ms2deepscore/models/SiameseSpectralModel.py -> build/lib/ms2deepscore/models 2026-03-27T08:13:04,645 copying ms2deepscore/models/load_model.py -> build/lib/ms2deepscore/models 2026-03-27T08:13:04,648 copying ms2deepscore/models/LinearEmbeddingEvaluation.py -> build/lib/ms2deepscore/models 2026-03-27T08:13:04,649 copying ms2deepscore/models/loss_functions.py -> build/lib/ms2deepscore/models 2026-03-27T08:13:04,651 copying ms2deepscore/models/EmbeddingEvaluatorModel.py -> build/lib/ms2deepscore/models 2026-03-27T08:13:04,654 creating build/lib/ms2deepscore/train_new_model 2026-03-27T08:13:04,655 copying ms2deepscore/train_new_model/train_ms2deepscore.py -> build/lib/ms2deepscore/train_new_model 2026-03-27T08:13:04,658 copying ms2deepscore/train_new_model/TrainingBatchGenerator.py -> build/lib/ms2deepscore/train_new_model 2026-03-27T08:13:04,660 copying ms2deepscore/train_new_model/inchikey_pair_selection_cross_ionmode.py -> build/lib/ms2deepscore/train_new_model 2026-03-27T08:13:04,662 copying ms2deepscore/train_new_model/__init__.py -> build/lib/ms2deepscore/train_new_model 2026-03-27T08:13:04,664 copying ms2deepscore/train_new_model/data_augmentation.py -> build/lib/ms2deepscore/train_new_model 2026-03-27T08:13:04,666 copying ms2deepscore/train_new_model/DataGeneratorEmbeddingEvaluation.py -> build/lib/ms2deepscore/train_new_model 2026-03-27T08:13:04,668 copying ms2deepscore/train_new_model/SpectrumPairGenerator.py -> build/lib/ms2deepscore/train_new_model 2026-03-27T08:13:04,670 copying ms2deepscore/train_new_model/validation_and_test_split.py -> build/lib/ms2deepscore/train_new_model 2026-03-27T08:13:04,672 copying ms2deepscore/train_new_model/inchikey_pair_selection.py -> build/lib/ms2deepscore/train_new_model 2026-03-27T08:13:04,675 creating build/lib/ms2deepscore/benchmarking 2026-03-27T08:13:04,676 copying ms2deepscore/benchmarking/CalculateScoresBetweenAllIonmodes.py -> build/lib/ms2deepscore/benchmarking 2026-03-27T08:13:04,678 copying ms2deepscore/benchmarking/__init__.py -> build/lib/ms2deepscore/benchmarking 2026-03-27T08:13:04,680 copying ms2deepscore/benchmarking/plot_average_per_bin.py -> build/lib/ms2deepscore/benchmarking 2026-03-27T08:13:04,682 copying ms2deepscore/benchmarking/plot_loss_per_bin.py -> build/lib/ms2deepscore/benchmarking 2026-03-27T08:13:04,684 copying ms2deepscore/benchmarking/plot_heatmaps.py -> build/lib/ms2deepscore/benchmarking 2026-03-27T08:13:04,687 creating build/lib/ms2deepscore/wrapper_functions 2026-03-27T08:13:04,688 copying ms2deepscore/wrapper_functions/__init__.py -> build/lib/ms2deepscore/wrapper_functions 2026-03-27T08:13:04,689 copying ms2deepscore/wrapper_functions/training_wrapper_functions.py -> build/lib/ms2deepscore/wrapper_functions 2026-03-27T08:13:04,692 copying ms2deepscore/wrapper_functions/plotting_wrapper_functions.py -> build/lib/ms2deepscore/wrapper_functions 2026-03-27T08:13:04,694 creating build/lib/ms2deepscore/validation_loss_calculation 2026-03-27T08:13:04,695 copying ms2deepscore/validation_loss_calculation/__init__.py -> build/lib/ms2deepscore/validation_loss_calculation 2026-03-27T08:13:04,697 copying ms2deepscore/validation_loss_calculation/ValidationLossCalculator.py -> build/lib/ms2deepscore/validation_loss_calculation 2026-03-27T08:13:04,699 copying ms2deepscore/validation_loss_calculation/PredictionsAndTanimotoScores.py -> build/lib/ms2deepscore/validation_loss_calculation 2026-03-27T08:13:04,701 copying ms2deepscore/validation_loss_calculation/calculate_scores_for_validation.py -> build/lib/ms2deepscore/validation_loss_calculation 2026-03-27T08:13:04,703 running egg_info 2026-03-27T08:13:04,730 writing ms2deepscore.egg-info/PKG-INFO 2026-03-27T08:13:04,736 writing dependency_links to ms2deepscore.egg-info/dependency_links.txt 2026-03-27T08:13:04,739 writing requirements to ms2deepscore.egg-info/requires.txt 2026-03-27T08:13:04,740 writing top-level names to ms2deepscore.egg-info/top_level.txt 2026-03-27T08:13:04,779 reading manifest file 'ms2deepscore.egg-info/SOURCES.txt' 2026-03-27T08:13:04,784 adding license file 'LICENSE' 2026-03-27T08:13:04,790 writing manifest file 'ms2deepscore.egg-info/SOURCES.txt' 2026-03-27T08:13:04,825 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2026-03-27T08:13:04,826 !! 2026-03-27T08:13:04,827 ******************************************************************************** 2026-03-27T08:13:04,828 Please avoid running ``setup.py`` directly. 2026-03-27T08:13:04,828 Instead, use pypa/build, pypa/installer or other 2026-03-27T08:13:04,829 standards-based tools. 2026-03-27T08:13:04,830 This deprecation is overdue, please update your project and remove deprecated 2026-03-27T08:13:04,830 calls to avoid build errors in the future. 2026-03-27T08:13:04,832 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2026-03-27T08:13:04,832 ******************************************************************************** 2026-03-27T08:13:04,833 !! 2026-03-27T08:13:04,834 self.initialize_options() 2026-03-27T08:13:04,854 installing to build/bdist.linux-armv7l/wheel 2026-03-27T08:13:04,854 running install 2026-03-27T08:13:04,879 running install_lib 2026-03-27T08:13:04,905 creating build/bdist.linux-armv7l/wheel 2026-03-27T08:13:04,907 creating build/bdist.linux-armv7l/wheel/ms2deepscore 2026-03-27T08:13:04,909 creating build/bdist.linux-armv7l/wheel/ms2deepscore/models 2026-03-27T08:13:04,910 copying build/lib/ms2deepscore/models/__model_format__.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/models 2026-03-27T08:13:04,913 copying build/lib/ms2deepscore/models/legacy_model_converter.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/models 2026-03-27T08:13:04,915 copying build/lib/ms2deepscore/models/io_utils.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/models 2026-03-27T08:13:04,916 copying build/lib/ms2deepscore/models/helper_functions.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/models 2026-03-27T08:13:04,918 copying build/lib/ms2deepscore/models/__init__.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/models 2026-03-27T08:13:04,920 copying build/lib/ms2deepscore/models/SiameseSpectralModel.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/models 2026-03-27T08:13:04,923 copying build/lib/ms2deepscore/models/load_model.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/models 2026-03-27T08:13:04,925 copying build/lib/ms2deepscore/models/LinearEmbeddingEvaluation.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/models 2026-03-27T08:13:04,927 copying build/lib/ms2deepscore/models/loss_functions.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/models 2026-03-27T08:13:04,928 copying build/lib/ms2deepscore/models/EmbeddingEvaluatorModel.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/models 2026-03-27T08:13:04,931 creating build/bdist.linux-armv7l/wheel/ms2deepscore/train_new_model 2026-03-27T08:13:04,932 copying build/lib/ms2deepscore/train_new_model/train_ms2deepscore.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/train_new_model 2026-03-27T08:13:04,934 copying build/lib/ms2deepscore/train_new_model/TrainingBatchGenerator.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/train_new_model 2026-03-27T08:13:04,936 copying build/lib/ms2deepscore/train_new_model/inchikey_pair_selection_cross_ionmode.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/train_new_model 2026-03-27T08:13:04,938 copying build/lib/ms2deepscore/train_new_model/__init__.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/train_new_model 2026-03-27T08:13:04,940 copying build/lib/ms2deepscore/train_new_model/data_augmentation.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/train_new_model 2026-03-27T08:13:04,942 copying build/lib/ms2deepscore/train_new_model/DataGeneratorEmbeddingEvaluation.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/train_new_model 2026-03-27T08:13:04,945 copying build/lib/ms2deepscore/train_new_model/SpectrumPairGenerator.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/train_new_model 2026-03-27T08:13:04,946 copying build/lib/ms2deepscore/train_new_model/validation_and_test_split.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/train_new_model 2026-03-27T08:13:04,948 copying build/lib/ms2deepscore/train_new_model/inchikey_pair_selection.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/train_new_model 2026-03-27T08:13:04,952 copying build/lib/ms2deepscore/SettingsMS2Deepscore.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore 2026-03-27T08:13:04,954 copying build/lib/ms2deepscore/__version__.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore 2026-03-27T08:13:04,956 copying build/lib/ms2deepscore/MS2DeepScoreEvaluated.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore 2026-03-27T08:13:04,958 copying build/lib/ms2deepscore/utils.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore 2026-03-27T08:13:04,961 creating build/bdist.linux-armv7l/wheel/ms2deepscore/benchmarking 2026-03-27T08:13:04,962 copying build/lib/ms2deepscore/benchmarking/CalculateScoresBetweenAllIonmodes.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/benchmarking 2026-03-27T08:13:04,964 copying build/lib/ms2deepscore/benchmarking/__init__.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/benchmarking 2026-03-27T08:13:04,966 copying build/lib/ms2deepscore/benchmarking/plot_average_per_bin.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/benchmarking 2026-03-27T08:13:04,967 copying build/lib/ms2deepscore/benchmarking/plot_loss_per_bin.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/benchmarking 2026-03-27T08:13:04,969 copying build/lib/ms2deepscore/benchmarking/plot_heatmaps.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/benchmarking 2026-03-27T08:13:04,971 copying build/lib/ms2deepscore/fingerprint_utils.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore 2026-03-27T08:13:04,973 copying build/lib/ms2deepscore/__init__.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore 2026-03-27T08:13:04,975 creating build/bdist.linux-armv7l/wheel/ms2deepscore/wrapper_functions 2026-03-27T08:13:04,977 copying build/lib/ms2deepscore/wrapper_functions/__init__.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/wrapper_functions 2026-03-27T08:13:04,979 copying build/lib/ms2deepscore/wrapper_functions/training_wrapper_functions.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/wrapper_functions 2026-03-27T08:13:04,981 copying build/lib/ms2deepscore/wrapper_functions/plotting_wrapper_functions.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/wrapper_functions 2026-03-27T08:13:04,983 copying build/lib/ms2deepscore/MetadataFeatureGenerator.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore 2026-03-27T08:13:04,985 copying build/lib/ms2deepscore/MS2DeepScore.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore 2026-03-27T08:13:04,987 copying build/lib/ms2deepscore/tensorize_spectra.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore 2026-03-27T08:13:04,989 creating build/bdist.linux-armv7l/wheel/ms2deepscore/validation_loss_calculation 2026-03-27T08:13:04,990 copying build/lib/ms2deepscore/validation_loss_calculation/__init__.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/validation_loss_calculation 2026-03-27T08:13:04,992 copying build/lib/ms2deepscore/validation_loss_calculation/ValidationLossCalculator.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/validation_loss_calculation 2026-03-27T08:13:04,994 copying build/lib/ms2deepscore/validation_loss_calculation/PredictionsAndTanimotoScores.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/validation_loss_calculation 2026-03-27T08:13:04,996 copying build/lib/ms2deepscore/validation_loss_calculation/calculate_scores_for_validation.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/validation_loss_calculation 2026-03-27T08:13:04,998 copying build/lib/ms2deepscore/vector_operations.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore 2026-03-27T08:13:05,001 creating build/bdist.linux-armv7l/wheel/tests 2026-03-27T08:13:05,002 copying build/lib/tests/test_vector_operations.py -> build/bdist.linux-armv7l/wheel/./tests 2026-03-27T08:13:05,004 copying build/lib/tests/test_fingerprint_utils.py -> build/bdist.linux-armv7l/wheel/./tests 2026-03-27T08:13:05,007 copying build/lib/tests/test_plotting.py -> build/bdist.linux-armv7l/wheel/./tests 2026-03-27T08:13:05,009 copying build/lib/tests/test_embedding_evaluator.py -> build/bdist.linux-armv7l/wheel/./tests 2026-03-27T08:13:05,011 copying build/lib/tests/test_loss_functions.py -> build/bdist.linux-armv7l/wheel/./tests 2026-03-27T08:13:05,013 copying build/lib/tests/test_data_augmentation.py -> build/bdist.linux-armv7l/wheel/./tests 2026-03-27T08:13:05,015 copying build/lib/tests/test_training_wrapper_function.py -> build/bdist.linux-armv7l/wheel/./tests 2026-03-27T08:13:05,017 copying build/lib/tests/test_train_ms2deepscore.py -> build/bdist.linux-armv7l/wheel/./tests 2026-03-27T08:13:05,019 copying build/lib/tests/create_test_spectra.py -> build/bdist.linux-armv7l/wheel/./tests 2026-03-27T08:13:05,021 copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./tests 2026-03-27T08:13:05,022 copying build/lib/tests/test_CalculateScoresBetweenAllIonmodes.py -> build/bdist.linux-armv7l/wheel/./tests 2026-03-27T08:13:05,024 copying build/lib/tests/test_validation_and_test_split.py -> build/bdist.linux-armv7l/wheel/./tests 2026-03-27T08:13:05,026 copying build/lib/tests/test_MetadataFeatureGenerator.py -> build/bdist.linux-armv7l/wheel/./tests 2026-03-27T08:13:05,029 copying build/lib/tests/test_validation_loss_calculator.py -> build/bdist.linux-armv7l/wheel/./tests 2026-03-27T08:13:05,030 copying build/lib/tests/test_PredictionsAndTanimotoScores.py -> build/bdist.linux-armv7l/wheel/./tests 2026-03-27T08:13:05,032 copying build/lib/tests/test_ms2deepscore_evaluated.py -> build/bdist.linux-armv7l/wheel/./tests 2026-03-27T08:13:05,034 copying build/lib/tests/test_SettingsMS2deepscore.py -> build/bdist.linux-armv7l/wheel/./tests 2026-03-27T08:13:05,037 copying build/lib/tests/test_inchikey_pair_selection.py -> build/bdist.linux-armv7l/wheel/./tests 2026-03-27T08:13:05,039 copying build/lib/tests/test_utils.py -> build/bdist.linux-armv7l/wheel/./tests 2026-03-27T08:13:05,041 copying build/lib/tests/test_calculate_scores_for_validation.py -> build/bdist.linux-armv7l/wheel/./tests 2026-03-27T08:13:05,043 copying build/lib/tests/test_ms2deepscore.py -> build/bdist.linux-armv7l/wheel/./tests 2026-03-27T08:13:05,045 copying build/lib/tests/test_converter_legacy.py -> build/bdist.linux-armv7l/wheel/./tests 2026-03-27T08:13:05,047 copying build/lib/tests/test_data_generators.py -> build/bdist.linux-armv7l/wheel/./tests 2026-03-27T08:13:05,050 copying build/lib/tests/test_load_model.py -> build/bdist.linux-armv7l/wheel/./tests 2026-03-27T08:13:05,052 copying build/lib/tests/test_siamese_spectra_model.py -> build/bdist.linux-armv7l/wheel/./tests 2026-03-27T08:13:05,054 running install_egg_info 2026-03-27T08:13:05,087 Copying ms2deepscore.egg-info to build/bdist.linux-armv7l/wheel/./ms2deepscore-2.8.0-py3.11.egg-info 2026-03-27T08:13:05,100 running install_scripts 2026-03-27T08:13:05,112 creating build/bdist.linux-armv7l/wheel/ms2deepscore-2.8.0.dist-info/WHEEL 2026-03-27T08:13:05,114 creating '/tmp/pip-wheel-v9bbjnrr/ms2deepscore-2.8.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-03-27T08:13:05,117 adding 'ms2deepscore/MS2DeepScore.py' 2026-03-27T08:13:05,119 adding 'ms2deepscore/MS2DeepScoreEvaluated.py' 2026-03-27T08:13:05,121 adding 'ms2deepscore/MetadataFeatureGenerator.py' 2026-03-27T08:13:05,123 adding 'ms2deepscore/SettingsMS2Deepscore.py' 2026-03-27T08:13:05,125 adding 'ms2deepscore/__init__.py' 2026-03-27T08:13:05,126 adding 'ms2deepscore/__version__.py' 2026-03-27T08:13:05,128 adding 'ms2deepscore/fingerprint_utils.py' 2026-03-27T08:13:05,129 adding 'ms2deepscore/tensorize_spectra.py' 2026-03-27T08:13:05,131 adding 'ms2deepscore/utils.py' 2026-03-27T08:13:05,132 adding 'ms2deepscore/vector_operations.py' 2026-03-27T08:13:05,134 adding 'ms2deepscore/benchmarking/CalculateScoresBetweenAllIonmodes.py' 2026-03-27T08:13:05,136 adding 'ms2deepscore/benchmarking/__init__.py' 2026-03-27T08:13:05,137 adding 'ms2deepscore/benchmarking/plot_average_per_bin.py' 2026-03-27T08:13:05,138 adding 'ms2deepscore/benchmarking/plot_heatmaps.py' 2026-03-27T08:13:05,140 adding 'ms2deepscore/benchmarking/plot_loss_per_bin.py' 2026-03-27T08:13:05,142 adding 'ms2deepscore/models/EmbeddingEvaluatorModel.py' 2026-03-27T08:13:05,144 adding 'ms2deepscore/models/LinearEmbeddingEvaluation.py' 2026-03-27T08:13:05,146 adding 'ms2deepscore/models/SiameseSpectralModel.py' 2026-03-27T08:13:05,147 adding 'ms2deepscore/models/__init__.py' 2026-03-27T08:13:05,148 adding 'ms2deepscore/models/__model_format__.py' 2026-03-27T08:13:05,150 adding 'ms2deepscore/models/helper_functions.py' 2026-03-27T08:13:05,151 adding 'ms2deepscore/models/io_utils.py' 2026-03-27T08:13:05,153 adding 'ms2deepscore/models/legacy_model_converter.py' 2026-03-27T08:13:05,154 adding 'ms2deepscore/models/load_model.py' 2026-03-27T08:13:05,156 adding 'ms2deepscore/models/loss_functions.py' 2026-03-27T08:13:05,158 adding 'ms2deepscore/train_new_model/DataGeneratorEmbeddingEvaluation.py' 2026-03-27T08:13:05,159 adding 'ms2deepscore/train_new_model/SpectrumPairGenerator.py' 2026-03-27T08:13:05,161 adding 'ms2deepscore/train_new_model/TrainingBatchGenerator.py' 2026-03-27T08:13:05,162 adding 'ms2deepscore/train_new_model/__init__.py' 2026-03-27T08:13:05,163 adding 'ms2deepscore/train_new_model/data_augmentation.py' 2026-03-27T08:13:05,166 adding 'ms2deepscore/train_new_model/inchikey_pair_selection.py' 2026-03-27T08:13:05,168 adding 'ms2deepscore/train_new_model/inchikey_pair_selection_cross_ionmode.py' 2026-03-27T08:13:05,170 adding 'ms2deepscore/train_new_model/train_ms2deepscore.py' 2026-03-27T08:13:05,171 adding 'ms2deepscore/train_new_model/validation_and_test_split.py' 2026-03-27T08:13:05,173 adding 'ms2deepscore/validation_loss_calculation/PredictionsAndTanimotoScores.py' 2026-03-27T08:13:05,174 adding 'ms2deepscore/validation_loss_calculation/ValidationLossCalculator.py' 2026-03-27T08:13:05,176 adding 'ms2deepscore/validation_loss_calculation/__init__.py' 2026-03-27T08:13:05,177 adding 'ms2deepscore/validation_loss_calculation/calculate_scores_for_validation.py' 2026-03-27T08:13:05,179 adding 'ms2deepscore/wrapper_functions/__init__.py' 2026-03-27T08:13:05,180 adding 'ms2deepscore/wrapper_functions/plotting_wrapper_functions.py' 2026-03-27T08:13:05,182 adding 'ms2deepscore/wrapper_functions/training_wrapper_functions.py' 2026-03-27T08:13:05,185 adding 'ms2deepscore-2.8.0.dist-info/licenses/LICENSE' 2026-03-27T08:13:05,187 adding 'tests/__init__.py' 2026-03-27T08:13:05,189 adding 'tests/create_test_spectra.py' 2026-03-27T08:13:05,190 adding 'tests/test_CalculateScoresBetweenAllIonmodes.py' 2026-03-27T08:13:05,191 adding 'tests/test_MetadataFeatureGenerator.py' 2026-03-27T08:13:05,193 adding 'tests/test_PredictionsAndTanimotoScores.py' 2026-03-27T08:13:05,194 adding 'tests/test_SettingsMS2deepscore.py' 2026-03-27T08:13:05,195 adding 'tests/test_calculate_scores_for_validation.py' 2026-03-27T08:13:05,197 adding 'tests/test_converter_legacy.py' 2026-03-27T08:13:05,198 adding 'tests/test_data_augmentation.py' 2026-03-27T08:13:05,200 adding 'tests/test_data_generators.py' 2026-03-27T08:13:05,201 adding 'tests/test_embedding_evaluator.py' 2026-03-27T08:13:05,203 adding 'tests/test_fingerprint_utils.py' 2026-03-27T08:13:05,205 adding 'tests/test_inchikey_pair_selection.py' 2026-03-27T08:13:05,207 adding 'tests/test_load_model.py' 2026-03-27T08:13:05,208 adding 'tests/test_loss_functions.py' 2026-03-27T08:13:05,209 adding 'tests/test_ms2deepscore.py' 2026-03-27T08:13:05,211 adding 'tests/test_ms2deepscore_evaluated.py' 2026-03-27T08:13:05,212 adding 'tests/test_plotting.py' 2026-03-27T08:13:05,213 adding 'tests/test_siamese_spectra_model.py' 2026-03-27T08:13:05,215 adding 'tests/test_train_ms2deepscore.py' 2026-03-27T08:13:05,216 adding 'tests/test_training_wrapper_function.py' 2026-03-27T08:13:05,217 adding 'tests/test_utils.py' 2026-03-27T08:13:05,219 adding 'tests/test_validation_and_test_split.py' 2026-03-27T08:13:05,220 adding 'tests/test_validation_loss_calculator.py' 2026-03-27T08:13:05,222 adding 'tests/test_vector_operations.py' 2026-03-27T08:13:05,224 adding 'ms2deepscore-2.8.0.dist-info/METADATA' 2026-03-27T08:13:05,225 adding 'ms2deepscore-2.8.0.dist-info/WHEEL' 2026-03-27T08:13:05,226 adding 'ms2deepscore-2.8.0.dist-info/top_level.txt' 2026-03-27T08:13:05,227 adding 'ms2deepscore-2.8.0.dist-info/RECORD' 2026-03-27T08:13:05,230 removing build/bdist.linux-armv7l/wheel 2026-03-27T08:13:05,354 Building wheel for ms2deepscore (setup.py): finished with status 'done' 2026-03-27T08:13:05,358 Created wheel for ms2deepscore: filename=ms2deepscore-2.8.0-py3-none-any.whl size=107955 sha256=1be802e6b41f262f2bb0da493d82fb5c68fc4f7f33ba319aa506245b258c9fa7 2026-03-27T08:13:05,359 Stored in directory: /tmp/pip-ephem-wheel-cache-rvo7584q/wheels/f8/d4/52/26c0a57679f84a01588992285f9a61606af4accffb35c8842b 2026-03-27T08:13:05,372 Successfully built ms2deepscore 2026-03-27T08:13:05,390 Removed build tracker: '/tmp/pip-build-tracker-w5sdsxxt'