2026-03-31T13:10:50,584 Created temporary directory: /tmp/pip-ephem-wheel-cache-srski5np
2026-03-31T13:10:50,586 Created temporary directory: /tmp/pip-build-tracker-dt36r57n
2026-03-31T13:10:50,587 Initialized build tracking at /tmp/pip-build-tracker-dt36r57n
2026-03-31T13:10:50,587 Created build tracker: /tmp/pip-build-tracker-dt36r57n
2026-03-31T13:10:50,588 Entered build tracker: /tmp/pip-build-tracker-dt36r57n
2026-03-31T13:10:50,589 Created temporary directory: /tmp/pip-wheel-c03hvkft
2026-03-31T13:10:50,591 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-03-31T13:10:50,594 Created temporary directory: /tmp/pip-ephem-wheel-cache-ax3qfj_m
2026-03-31T13:10:50,615 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-03-31T13:10:50,619 2 location(s) to search for versions of ms2deepscore:
2026-03-31T13:10:50,619 * https://pypi.org/simple/ms2deepscore/
2026-03-31T13:10:50,619 * https://www.piwheels.org/simple/ms2deepscore/
2026-03-31T13:10:50,620 Fetching project page and analyzing links: https://pypi.org/simple/ms2deepscore/
2026-03-31T13:10:50,620 Getting page https://pypi.org/simple/ms2deepscore/
2026-03-31T13:10:50,622 Found index url https://pypi.org/simple
2026-03-31T13:10:50,857 Fetched page https://pypi.org/simple/ms2deepscore/ as application/vnd.pypi.simple.v1+json
2026-03-31T13:10:50,869   Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/1a/74/3811b05bbe009bc9c96f2fbb4f45faad6d8412c862076677775aa9cd732c/ms2deepscore-0.1.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7)
2026-03-31T13:10:50,870   Found link https://files.pythonhosted.org/packages/03/2a/45ece91185f3304a1b05a8c82a54fdf956b19ff4702860d0446c4f33634c/ms2deepscore-0.1.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7), version: 0.1.0
2026-03-31T13:10:50,871   Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/58/25/baead1a09c641cf9294c4ecbd0546957d58ec5c6dc551171f67a3e51c2a9/ms2deepscore-0.1.1-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7)
2026-03-31T13:10:50,872   Found link https://files.pythonhosted.org/packages/5f/8f/bc16f5973b58bc959da0949523355288fa484163032307fc632c771870a2/ms2deepscore-0.1.1.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7), version: 0.1.1
2026-03-31T13:10:50,873   Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/3e/8e/b27fd7655be965286f69fe43bc7c4ecb0329951dfc3bb682ac69244de902/ms2deepscore-0.1.2-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7)
2026-03-31T13:10:50,874   Found link https://files.pythonhosted.org/packages/d0/0e/2c0b8614641c63ed003a2091cd2a727deb2787ae164b41bbdb47ebdcf5b7/ms2deepscore-0.1.2.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7), version: 0.1.2
2026-03-31T13:10:50,874   Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/fc/e0/a60f69b0ce0da6ec06026a701ffcf4a5514cf7f24b7e2d5539beae9a70bf/ms2deepscore-0.1.3-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7)
2026-03-31T13:10:50,875   Found link https://files.pythonhosted.org/packages/fb/60/3afc84d1e1bebd7dbb79e41396ef324fff01119cb52c39a5350319bc23e7/ms2deepscore-0.1.3.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7), version: 0.1.3
2026-03-31T13:10:50,876   Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/95/c5/3a40a446c30181e38baa0255dcf15be37bbdb67aab0edb9bfff4516c863d/ms2deepscore-0.2.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7)
2026-03-31T13:10:50,877   Found link https://files.pythonhosted.org/packages/e3/ef/388b820259bd6edf0149ff9a555fad6545244e0c45d68ff42848be3d7c6b/ms2deepscore-0.2.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7), version: 0.2.0
2026-03-31T13:10:50,878   Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/0e/83/ceea507b050aac37fff3e115c5ee2204eda6440e209a2f4dee7ef0775495/ms2deepscore-0.2.1-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7)
2026-03-31T13:10:50,879   Found link https://files.pythonhosted.org/packages/4a/b6/fcf3e9299040ae35bb80304cc13c649720f9b851e89012e6017a54dd1618/ms2deepscore-0.2.1.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7), version: 0.2.1
2026-03-31T13:10:50,880   Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/d0/20/4f0bec692f58860eff0ef96c21cd513a06ec0c42f3a105ac5c791127fbf7/ms2deepscore-0.2.2-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7)
2026-03-31T13:10:50,880   Found link https://files.pythonhosted.org/packages/46/2b/2dbcb55ba0e5a76c6617b06faa5199abf106254a95499469d20d906786a8/ms2deepscore-0.2.2.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7), version: 0.2.2
2026-03-31T13:10:50,881   Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/c2/a1/8f203ac512a44c46eff2f3956678bd0a2266c73f261f69d168d44a4844b6/ms2deepscore-0.2.3-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7)
2026-03-31T13:10:50,882   Found link https://files.pythonhosted.org/packages/fa/ad/bb478c564a8d0b9b729a60c0eb8b7d8e4297144d781d7a5d0777709e656f/ms2deepscore-0.2.3.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7), version: 0.2.3
2026-03-31T13:10:50,883   Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/0e/83/d6618132d96d30ff18d6312e478bc65167919ca985e8530e1bfc9e1b6ab0/ms2deepscore-0.3.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7)
2026-03-31T13:10:50,883   Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/c1/b4/582f0f136321e1441c8e9ad72300f365b432f495df5552a892e5eac3cf51/ms2deepscore-0.3.0.1-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7)
2026-03-31T13:10:50,884   Found link https://files.pythonhosted.org/packages/e8/92/04692dbbb4fb9b85f85237e7eb35dbf17dc6afd4045f4e24da63ac18ac45/ms2deepscore-0.3.0.1.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7), version: 0.3.0.1
2026-03-31T13:10:50,885   Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/73/31/eaa5bde2046120474c4d717afac0f5ab88ff83befac95ab5e98931c79421/ms2deepscore-0.3.1-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7)
2026-03-31T13:10:50,886   Found link https://files.pythonhosted.org/packages/dd/d7/d4970ef86e3d5fd31d66eec3ffafcf8fb9b2a7272cfd220559628556159d/ms2deepscore-0.3.1.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.7), version: 0.3.1
2026-03-31T13:10:50,887   Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/b7/81/e956a390e9f80855be4e45b6755df79637b8440fb8ae96e852948dcc34b0/ms2deepscore-0.4.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.8)
2026-03-31T13:10:50,888   Found link https://files.pythonhosted.org/packages/8e/60/3d6b1ff9f4364083d9854bb090e3b2ffaacaa018985a14990a03e8a31bab/ms2deepscore-0.4.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.8), version: 0.4.0
2026-03-31T13:10:50,888   Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/e3/87/cc2d5f537e0fe3c05be45b0e9b1b73a91365bb5f600040f2f3b6dd601e95/ms2deepscore-0.5.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.8)
2026-03-31T13:10:50,889   Found link https://files.pythonhosted.org/packages/de/e7/b0f2a802ff398551c3ed9d8980e52139fded44b2cfa73d4e5fdc05bedeb5/ms2deepscore-0.5.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.8), version: 0.5.0
2026-03-31T13:10:50,890   Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/34/c9/c96bc9efbc9bf1e6cd7eef199031487c66cac573a150b9ab6b9714752d3f/ms2deepscore-1.0.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.8)
2026-03-31T13:10:50,891   Found link https://files.pythonhosted.org/packages/95/24/832e3b4b5bab0842a56babde588f073dfa3283891dac80c46ae04b8b509e/ms2deepscore-1.0.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.8), version: 1.0.0
2026-03-31T13:10:50,892   Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/10/04/39bf5d75af583ee81e5e0b9c240b3c553866c174c42577006c84f22b4916/ms2deepscore-2.0.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9)
2026-03-31T13:10:50,892   Found link https://files.pythonhosted.org/packages/06/6e/f31d145163172ba5aa08e5aef54dc0033ba3a0a2f211597b875c28b12159/ms2deepscore-2.0.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9), version: 2.0.0
2026-03-31T13:10:50,893   Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/74/e5/efc479e898364a2a76f4c555ae331ba839efbf186f5a12ea71fbfbc16694/ms2deepscore-2.1.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9)
2026-03-31T13:10:50,894   Found link https://files.pythonhosted.org/packages/be/56/ee906d7f39c9d0250ae3f8d434b707e18df28676db9a0d4acb169f0bca1b/ms2deepscore-2.1.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9), version: 2.1.0
2026-03-31T13:10:50,894   Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/c6/48/f25c49217e18d41f8a9f88c8d212ac471ce0f85018fd52412727cab6896f/ms2deepscore-2.2.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9)
2026-03-31T13:10:50,895   Found link https://files.pythonhosted.org/packages/28/3c/e3ee8e79bc13c7ec1b0c73c8e203bef2aa8217a53da52789e267c3000c87/ms2deepscore-2.2.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9), version: 2.2.0
2026-03-31T13:10:50,896   Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/16/bd/7ee1932266bcb9cd5d4d820d06172eab9475c13595c4c728b06b04593e18/ms2deepscore-2.3.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9)
2026-03-31T13:10:50,897   Found link https://files.pythonhosted.org/packages/5c/48/4c0c1bf8bd30607c86dcc4e91f9dd7cc8fdcf313a65147c20e9b6caff3f6/ms2deepscore-2.3.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9), version: 2.3.0
2026-03-31T13:10:50,898   Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/0b/98/ea31a4171e871dbaf9895812c7260275c0aa6bbd90bbbdc49072901be91b/ms2deepscore-2.4.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9)
2026-03-31T13:10:50,899   Found link https://files.pythonhosted.org/packages/5b/d6/7a057704de6b1fd5b07570d2786df1c83c8eef1d116f116d07e77e5773cd/ms2deepscore-2.4.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9), version: 2.4.0
2026-03-31T13:10:50,899   Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/6f/9e/4606fa9cb440af1967ba8d5c1983615a5d787a0f6c609344c466ff6596e1/ms2deepscore-2.5.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9)
2026-03-31T13:10:50,900   Found link https://files.pythonhosted.org/packages/e8/00/e0bdc31d6130df56c9473650b089c3c1916317bd4c1f2fde6643a5642c1a/ms2deepscore-2.5.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9), version: 2.5.0
2026-03-31T13:10:50,901   Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/27/0b/37c7fc9604887e78a5f8e8451b09ebb00264f91b70d1d06f4400837acf1a/ms2deepscore-2.5.1-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9)
2026-03-31T13:10:50,902   Found link https://files.pythonhosted.org/packages/c3/9d/0280da91f94b39480f2608501559b3d5609aab8d09962eefd0dde4960178/ms2deepscore-2.5.1.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.9), version: 2.5.1
2026-03-31T13:10:50,903   Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/34/1e/3d387308ad174819078b65f5e4ff5ebab0e4e703da037b805a1e5540633b/ms2deepscore-2.5.2-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.10)
2026-03-31T13:10:50,903   Found link https://files.pythonhosted.org/packages/85/c3/baed91f8d85eafcb1987b11561811bb907442a3e5fbe9a4c7ebb74fc7655/ms2deepscore-2.5.2.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.10), version: 2.5.2
2026-03-31T13:10:50,904   Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/a2/95/c3bfdaffbb06fa1bf23a680a44961aef2b345f01d5b0773c20970ee79aa5/ms2deepscore-2.5.3-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.10)
2026-03-31T13:10:50,905   Found link https://files.pythonhosted.org/packages/c9/42/047b712c6649021d42ff4d04ad47f6bb0df4bbb89d42bb2ec2b29248cc7c/ms2deepscore-2.5.3.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.10), version: 2.5.3
2026-03-31T13:10:50,905   Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/f3/07/01bb4fd4d3575cc7f9c2be26efb5aa5861e012bba606566df81def2dead7/ms2deepscore-2.5.4-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.10)
2026-03-31T13:10:50,906   Found link https://files.pythonhosted.org/packages/18/42/f693e562f9e0f26c45d021c4ed912fac373ef6e9ed13ee70eb2c670e5777/ms2deepscore-2.5.4.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.10), version: 2.5.4
2026-03-31T13:10:50,907   Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/4e/44/58ddfc2ba407e12d3679d09fffc5f3b1787bb1ac3f048301125ab7266c2d/ms2deepscore-2.5.5-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.10)
2026-03-31T13:10:50,908   Found link https://files.pythonhosted.org/packages/5c/bc/3b2085f38be2c9a1f0c636167fde65d8a5d191e2ff16871498b68b50b839/ms2deepscore-2.5.5.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.10), version: 2.5.5
2026-03-31T13:10:50,908   Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/d9/57/1c31ac1ebc2c8386d83675a1289fd8df972647899761d3b0d868e381cfd9/ms2deepscore-2.6.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.10)
2026-03-31T13:10:50,909   Found link https://files.pythonhosted.org/packages/dc/5a/50699393992ed7ea50a43a125dfad51d38d2ce51d92d6a91df3078a8fe26/ms2deepscore-2.6.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.10), version: 2.6.0
2026-03-31T13:10:50,910   Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/d2/81/ecf3c7a1ff41ee453fcca7e5bce890be9b393b5bf529541dce8f664a5b34/ms2deepscore-2.7.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.10)
2026-03-31T13:10:50,911   Found link https://files.pythonhosted.org/packages/d5/ff/3f55120b9e07bcf1b067faca677700a71b430608f29d84eba0ba4a2d80ab/ms2deepscore-2.7.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.10), version: 2.7.0
2026-03-31T13:10:50,912   Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/e4/7d/f08553fd823b44bc01bbedcf298257e147d303ec6a366d4fdb503de36592/ms2deepscore-2.7.1-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.10)
2026-03-31T13:10:50,913   Found link https://files.pythonhosted.org/packages/47/07/4dda15cdb1ce9bfc3e95ae0e2dc4d87c74271e51a0cf28747456e5a7536c/ms2deepscore-2.7.1.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.10), version: 2.7.1
2026-03-31T13:10:50,914   Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/fc/aa/bc0723eb2bca0bd979257ea8da5cd7fa23ac67126865d4439acd639bcff1/ms2deepscore-2.7.2-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.10)
2026-03-31T13:10:50,914   Found link https://files.pythonhosted.org/packages/04/36/ff7ec6e470824e2c6adce30744cd84b373f9628cfa6bbc727598f5beb28f/ms2deepscore-2.7.2.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.10), version: 2.7.2
2026-03-31T13:10:50,915   Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/2b/06/0c4fe09951ffa4d0e73d93b91ea606cf0443cbc6d8f429495dde99f57769/ms2deepscore-2.8.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.11)
2026-03-31T13:10:50,916   Found link https://files.pythonhosted.org/packages/2b/65/b7698151f14a11c035fb9a88bcdb67af8ef41a43299c2ac006cba3fbbe49/ms2deepscore-2.8.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.11), version: 2.8.0
2026-03-31T13:10:50,916   Skipping link: No binaries permitted for ms2deepscore: https://files.pythonhosted.org/packages/4a/61/8254e119557e6982c4ed88450f50e818f6e5e818041610b88640c9c9305a/ms2deepscore-2.9.0-py3-none-any.whl (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.11)
2026-03-31T13:10:50,917   Found link https://files.pythonhosted.org/packages/16/00/993bb989befe62792a494fea3a07c9b46cea1cf65912e7d60186c7d01cec/ms2deepscore-2.9.0.tar.gz (from https://pypi.org/simple/ms2deepscore/) (requires-python:>=3.11), version: 2.9.0
2026-03-31T13:10:50,918 Fetching project page and analyzing links: https://www.piwheels.org/simple/ms2deepscore/
2026-03-31T13:10:50,919 Getting page https://www.piwheels.org/simple/ms2deepscore/
2026-03-31T13:10:50,920 Found index url https://www.piwheels.org/simple
2026-03-31T13:10:51,093 Fetched page https://www.piwheels.org/simple/ms2deepscore/ as text/html
2026-03-31T13:10:51,102   Skipping link: No binaries permitted for ms2deepscore: https://www.piwheels.org/simple/ms2deepscore/ms2deepscore-2.8.0-py3-none-any.whl#sha256=1be802e6b41f262f2bb0da493d82fb5c68fc4f7f33ba319aa506245b258c9fa7 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.11)
2026-03-31T13:10:51,102   Skipping link: No binaries permitted for ms2deepscore: https://www.piwheels.org/simple/ms2deepscore/ms2deepscore-2.7.2-py3-none-any.whl#sha256=f3be8b11320044c4e7b8c51d145537c7c376c5847022171cbaba25df629ec83c (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.10)
2026-03-31T13:10:51,103   Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-2.7.1-py3-none-any.whl#sha256=39700ea3ef951451ebe27b55df1cfca4a3b0628a3fe69311da0d44a6cfe4f3a8 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.10)
2026-03-31T13:10:51,104   Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-2.7.0-py3-none-any.whl#sha256=ef46dd0a8a16f444040c0dcf4cd0b21fb1a22a101ee41c355fd1316b85ead684 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.10)
2026-03-31T13:10:51,104   Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-2.6.0-py3-none-any.whl#sha256=9a78357b30b1f66c78e2426f0055b5bdab98a662696dd8be22546590d42b36ea (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.10)
2026-03-31T13:10:51,105   Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-2.5.5-py3-none-any.whl#sha256=17bc0980f0bba9f828d8709c67150329d606172da2c73c956c23c6a39d2e1c74 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.10)
2026-03-31T13:10:51,106   Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-2.5.4-py3-none-any.whl#sha256=002f794c7b44a7d2349ce30d32816b60c474cb6458ad5c9d8019e10984c007b6 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.10)
2026-03-31T13:10:51,106   Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-2.5.3-py3-none-any.whl#sha256=6d187f5bbee54836722169cb7acfd9e0c49f3dd456c63d9aadd0274566b36d2b (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.10)
2026-03-31T13:10:51,107   Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-2.5.2-py3-none-any.whl#sha256=387165f52dd2bb36b532948a338ea06627aa070ec10682b97448d8519f3b7685 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.10)
2026-03-31T13:10:51,107   Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-2.5.1-py3-none-any.whl#sha256=139c9ddd1e12b321e42e5ab7703b3519dfe01b3253824b2c263348394e3125b5 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.9)
2026-03-31T13:10:51,108   Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-2.5.0-py3-none-any.whl#sha256=95ba003ee0680b0c8092e726bef8645a6a216daaf3c15981805b8c5320bf8711 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.9)
2026-03-31T13:10:51,108   Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-2.4.0-py3-none-any.whl#sha256=543ec87b7ae5afb745ab9b1bcffe5f5009dc26a353bd02ba770cbe6291f82197 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.9)
2026-03-31T13:10:51,109   Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-2.3.0-py3-none-any.whl#sha256=8b9c029307a76ba41d0fcb5e9ddc6c74cb8ebaf8219556a0a642adc9a1174204 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.9)
2026-03-31T13:10:51,109   Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-2.2.0-py3-none-any.whl#sha256=022a1a87f6be0840586bbd00386cc55669cdb6c40e75fd8a6dc8ae8477de7188 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.9)
2026-03-31T13:10:51,110   Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-2.1.0-py3-none-any.whl#sha256=529d9471b2893fff0a754dd732b3ae94a743cf292415a16c4d961a05059ccf51 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.9)
2026-03-31T13:10:51,111   Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-2.0.0-py3-none-any.whl#sha256=8994de77b6ae980b86865e6b66a3a00a5f093500d59dafc57feb95a590b0bc15 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.9)
2026-03-31T13:10:51,111   Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-1.0.0-py3-none-any.whl#sha256=ebb6dfa103cb4fda6111f93ed81fe3132c6aa25b6add4aa0954d049411355767 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.8)
2026-03-31T13:10:51,112   Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-0.5.0-py3-none-any.whl#sha256=0842f66cdfa311fc739f1a54a0aa350b81736072109ad22c0a2956b245671ca9 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.8)
2026-03-31T13:10:51,112   Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-0.4.0-py3-none-any.whl#sha256=4dedaf626a92bc8f1f45d292bbfbf0767ed8cda62aa8d171673fce5b06efec0b (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.8)
2026-03-31T13:10:51,113   Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-0.3.1-py3-none-any.whl#sha256=92064d782e428a6aa4cc0be1248d0a5d13ec9198fe27fa593102650ff0244af5 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.7)
2026-03-31T13:10:51,114   Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-0.3.0.1-py3-none-any.whl#sha256=bb504bbaadd7fcc84e2884f605cc708775fcc365ddf9d2a56660a1525c675db5 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.7)
2026-03-31T13:10:51,114   Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-0.2.3-py3-none-any.whl#sha256=706d132fca435c20106775fe7840f31f806ca2a821fc4ae334469c66ebbdd0a4 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.7)
2026-03-31T13:10:51,115   Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-0.2.2-py3-none-any.whl#sha256=1f63e35c9741701270c325aa2fed50599ea6cf11c98f99af0e7ce91bce861880 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.7)
2026-03-31T13:10:51,115   Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-0.2.1-py3-none-any.whl#sha256=12521d26bba175309f25faa9a2fb1092dd7c3c8bf301cffda07e87ed8ff6f522 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.7)
2026-03-31T13:10:51,116   Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-0.2.0-py3-none-any.whl#sha256=dd013664785ace14e4bea90f14a564666aef673b7e5071b2c46f8a521d0ab477 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.7)
2026-03-31T13:10:51,116   Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-0.1.3-py3-none-any.whl#sha256=df545be42698ceb35be27f6433fc886881199eab6f892d80a3017aee1031d2d4 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.7)
2026-03-31T13:10:51,117   Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-0.1.2-py3-none-any.whl#sha256=f16ecfa3272a9106b49f9960b5ef6f44bbe1efd490e63d1299b29626ad0aba39 (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.7)
2026-03-31T13:10:51,117   Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-0.1.1-py3-none-any.whl#sha256=60659f71513a0c31262d829d579ac9ea0fe7419d028a4b2948c240d9bc68af8c (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.7)
2026-03-31T13:10:51,118   Skipping link: No binaries permitted for ms2deepscore: https://archive1.piwheels.org/simple/ms2deepscore/ms2deepscore-0.1.0-py3-none-any.whl#sha256=2b61bbfded0320134ac06106688abcc249c3fb70ded487bc955e70d27218cf3b (from https://www.piwheels.org/simple/ms2deepscore/) (requires-python:>=3.7)
2026-03-31T13:10:51,119 Skipping link: not a file: https://www.piwheels.org/simple/ms2deepscore/
2026-03-31T13:10:51,119 Skipping link: not a file: https://pypi.org/simple/ms2deepscore/
2026-03-31T13:10:51,142 Given no hashes to check 1 links for project 'ms2deepscore': discarding no candidates
2026-03-31T13:10:51,160 Collecting ms2deepscore==2.9.0
2026-03-31T13:10:51,162   Created temporary directory: /tmp/pip-unpack-atu979i3
2026-03-31T13:10:51,312   Downloading ms2deepscore-2.9.0.tar.gz (91 kB)
2026-03-31T13:10:51,553   Added ms2deepscore==2.9.0 from https://files.pythonhosted.org/packages/16/00/993bb989befe62792a494fea3a07c9b46cea1cf65912e7d60186c7d01cec/ms2deepscore-2.9.0.tar.gz to build tracker '/tmp/pip-build-tracker-dt36r57n'
2026-03-31T13:10:51,555   Running setup.py (path:/tmp/pip-wheel-c03hvkft/ms2deepscore_02322ff2ff7645fcacb2542e5004a1d6/setup.py) egg_info for package ms2deepscore
2026-03-31T13:10:51,556   Created temporary directory: /tmp/pip-pip-egg-info-ql_ha1c_
2026-03-31T13:10:51,557   Preparing metadata (setup.py): started
2026-03-31T13:10:51,558   Running command python setup.py egg_info
2026-03-31T13:10:52,158   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:287: UserWarning: Unknown distribution option: 'test_suite'
2026-03-31T13:10:52,159     warnings.warn(msg)
2026-03-31T13:10:52,498   running egg_info
2026-03-31T13:10:52,526   creating /tmp/pip-pip-egg-info-ql_ha1c_/ms2deepscore.egg-info
2026-03-31T13:10:52,527   writing /tmp/pip-pip-egg-info-ql_ha1c_/ms2deepscore.egg-info/PKG-INFO
2026-03-31T13:10:52,534   writing dependency_links to /tmp/pip-pip-egg-info-ql_ha1c_/ms2deepscore.egg-info/dependency_links.txt
2026-03-31T13:10:52,537   writing requirements to /tmp/pip-pip-egg-info-ql_ha1c_/ms2deepscore.egg-info/requires.txt
2026-03-31T13:10:52,538   writing top-level names to /tmp/pip-pip-egg-info-ql_ha1c_/ms2deepscore.egg-info/top_level.txt
2026-03-31T13:10:52,540   writing manifest file '/tmp/pip-pip-egg-info-ql_ha1c_/ms2deepscore.egg-info/SOURCES.txt'
2026-03-31T13:10:52,640   reading manifest file '/tmp/pip-pip-egg-info-ql_ha1c_/ms2deepscore.egg-info/SOURCES.txt'
2026-03-31T13:10:52,642   adding license file 'LICENSE'
2026-03-31T13:10:52,646   writing manifest file '/tmp/pip-pip-egg-info-ql_ha1c_/ms2deepscore.egg-info/SOURCES.txt'
2026-03-31T13:10:52,757   Preparing metadata (setup.py): finished with status 'done'
2026-03-31T13:10:52,761   Source in /tmp/pip-wheel-c03hvkft/ms2deepscore_02322ff2ff7645fcacb2542e5004a1d6 has version 2.9.0, which satisfies requirement ms2deepscore==2.9.0 from https://files.pythonhosted.org/packages/16/00/993bb989befe62792a494fea3a07c9b46cea1cf65912e7d60186c7d01cec/ms2deepscore-2.9.0.tar.gz
2026-03-31T13:10:52,762   Removed ms2deepscore==2.9.0 from https://files.pythonhosted.org/packages/16/00/993bb989befe62792a494fea3a07c9b46cea1cf65912e7d60186c7d01cec/ms2deepscore-2.9.0.tar.gz from build tracker '/tmp/pip-build-tracker-dt36r57n'
2026-03-31T13:10:52,768 Created temporary directory: /tmp/pip-unpack-xsvrc6br
2026-03-31T13:10:52,769 Building wheels for collected packages: ms2deepscore
2026-03-31T13:10:52,774   Created temporary directory: /tmp/pip-wheel-nh6nb1n4
2026-03-31T13:10:52,774   Building wheel for ms2deepscore (setup.py): started
2026-03-31T13:10:52,776   Destination directory: /tmp/pip-wheel-nh6nb1n4
2026-03-31T13:10:52,776   Running command python setup.py bdist_wheel
2026-03-31T13:10:53,326   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:287: UserWarning: Unknown distribution option: 'test_suite'
2026-03-31T13:10:53,326     warnings.warn(msg)
2026-03-31T13:10:54,064   running bdist_wheel
2026-03-31T13:10:54,467   running build
2026-03-31T13:10:54,468   running build_py
2026-03-31T13:10:54,501   creating build/lib/tests
2026-03-31T13:10:54,503   copying tests/test_siamese_spectra_model.py -> build/lib/tests
2026-03-31T13:10:54,506   copying tests/test_vector_operations.py -> build/lib/tests
2026-03-31T13:10:54,508   copying tests/test_MetadataFeatureGenerator.py -> build/lib/tests
2026-03-31T13:10:54,511   copying tests/test_data_augmentation.py -> build/lib/tests
2026-03-31T13:10:54,514   copying tests/test_ms2deepscore_evaluated.py -> build/lib/tests
2026-03-31T13:10:54,517   copying tests/test_fingerprint_utils.py -> build/lib/tests
2026-03-31T13:10:54,521   copying tests/create_test_spectra.py -> build/lib/tests
2026-03-31T13:10:54,522   copying tests/test_inchikey_pair_selection_cross_ionmode.py -> build/lib/tests
2026-03-31T13:10:54,525   copying tests/test_train_ms2deepscore.py -> build/lib/tests
2026-03-31T13:10:54,527   copying tests/test_converter_legacy.py -> build/lib/tests
2026-03-31T13:10:54,530   copying tests/test_SettingsMS2deepscore.py -> build/lib/tests
2026-03-31T13:10:54,532   copying tests/__init__.py -> build/lib/tests
2026-03-31T13:10:54,534   copying tests/test_fingerprint_similarity_computations.py -> build/lib/tests
2026-03-31T13:10:54,538   copying tests/test_calculate_scores_for_validation.py -> build/lib/tests
2026-03-31T13:10:54,541   copying tests/test_PredictionsAndTanimotoScores.py -> build/lib/tests
2026-03-31T13:10:54,543   copying tests/test_validation_and_test_split.py -> build/lib/tests
2026-03-31T13:10:54,546   copying tests/test_ms2deepscore.py -> build/lib/tests
2026-03-31T13:10:54,548   copying tests/conftest.py -> build/lib/tests
2026-03-31T13:10:54,550   copying tests/test_inchikey_pair_selection.py -> build/lib/tests
2026-03-31T13:10:54,553   copying tests/test_plotting.py -> build/lib/tests
2026-03-31T13:10:54,555   copying tests/test_embedding_evaluator.py -> build/lib/tests
2026-03-31T13:10:54,559   copying tests/test_data_generators.py -> build/lib/tests
2026-03-31T13:10:54,563   copying tests/test_utils.py -> build/lib/tests
2026-03-31T13:10:54,567   copying tests/test_loss_functions.py -> build/lib/tests
2026-03-31T13:10:54,569   copying tests/test_training_wrapper_function.py -> build/lib/tests
2026-03-31T13:10:54,571   copying tests/test_load_model.py -> build/lib/tests
2026-03-31T13:10:54,574   copying tests/test_CalculateScoresBetweenAllIonmodes.py -> build/lib/tests
2026-03-31T13:10:54,576   copying tests/test_validation_loss_calculator.py -> build/lib/tests
2026-03-31T13:10:54,579   creating build/lib/ms2deepscore
2026-03-31T13:10:54,580   copying ms2deepscore/SettingsMS2Deepscore.py -> build/lib/ms2deepscore
2026-03-31T13:10:54,584   copying ms2deepscore/tensorize_spectra.py -> build/lib/ms2deepscore
2026-03-31T13:10:54,587   copying ms2deepscore/MS2DeepScore.py -> build/lib/ms2deepscore
2026-03-31T13:10:54,590   copying ms2deepscore/__version__.py -> build/lib/ms2deepscore
2026-03-31T13:10:54,592   copying ms2deepscore/__init__.py -> build/lib/ms2deepscore
2026-03-31T13:10:54,594   copying ms2deepscore/fingerprint_utils.py -> build/lib/ms2deepscore
2026-03-31T13:10:54,597   copying ms2deepscore/fingerprint_similarity_computations.py -> build/lib/ms2deepscore
2026-03-31T13:10:54,601   copying ms2deepscore/vector_operations.py -> build/lib/ms2deepscore
2026-03-31T13:10:54,604   copying ms2deepscore/MS2DeepScoreEvaluated.py -> build/lib/ms2deepscore
2026-03-31T13:10:54,608   copying ms2deepscore/MetadataFeatureGenerator.py -> build/lib/ms2deepscore
2026-03-31T13:10:54,612   copying ms2deepscore/utils.py -> build/lib/ms2deepscore
2026-03-31T13:10:54,616   creating build/lib/ms2deepscore/wrapper_functions
2026-03-31T13:10:54,618   copying ms2deepscore/wrapper_functions/plotting_wrapper_functions.py -> build/lib/ms2deepscore/wrapper_functions
2026-03-31T13:10:54,621   copying ms2deepscore/wrapper_functions/__init__.py -> build/lib/ms2deepscore/wrapper_functions
2026-03-31T13:10:54,623   copying ms2deepscore/wrapper_functions/training_wrapper_functions.py -> build/lib/ms2deepscore/wrapper_functions
2026-03-31T13:10:54,628   creating build/lib/ms2deepscore/models
2026-03-31T13:10:54,629   copying ms2deepscore/models/helper_functions.py -> build/lib/ms2deepscore/models
2026-03-31T13:10:54,631   copying ms2deepscore/models/SiameseSpectralModel.py -> build/lib/ms2deepscore/models
2026-03-31T13:10:54,634   copying ms2deepscore/models/io_utils.py -> build/lib/ms2deepscore/models
2026-03-31T13:10:54,635   copying ms2deepscore/models/__model_format__.py -> build/lib/ms2deepscore/models
2026-03-31T13:10:54,637   copying ms2deepscore/models/loss_functions.py -> build/lib/ms2deepscore/models
2026-03-31T13:10:54,639   copying ms2deepscore/models/legacy_model_converter.py -> build/lib/ms2deepscore/models
2026-03-31T13:10:54,641   copying ms2deepscore/models/load_model.py -> build/lib/ms2deepscore/models
2026-03-31T13:10:54,644   copying ms2deepscore/models/EmbeddingEvaluatorModel.py -> build/lib/ms2deepscore/models
2026-03-31T13:10:54,646   copying ms2deepscore/models/__init__.py -> build/lib/ms2deepscore/models
2026-03-31T13:10:54,648   copying ms2deepscore/models/LinearEmbeddingEvaluation.py -> build/lib/ms2deepscore/models
2026-03-31T13:10:54,650   creating build/lib/ms2deepscore/train_new_model
2026-03-31T13:10:54,651   copying ms2deepscore/train_new_model/data_augmentation.py -> build/lib/ms2deepscore/train_new_model
2026-03-31T13:10:54,653   copying ms2deepscore/train_new_model/TrainingBatchGenerator.py -> build/lib/ms2deepscore/train_new_model
2026-03-31T13:10:54,655   copying ms2deepscore/train_new_model/inchikey_pair_selection_cross_ionmode.py -> build/lib/ms2deepscore/train_new_model
2026-03-31T13:10:54,657   copying ms2deepscore/train_new_model/DataGeneratorEmbeddingEvaluation.py -> build/lib/ms2deepscore/train_new_model
2026-03-31T13:10:54,660   copying ms2deepscore/train_new_model/__init__.py -> build/lib/ms2deepscore/train_new_model
2026-03-31T13:10:54,661   copying ms2deepscore/train_new_model/validation_and_test_split.py -> build/lib/ms2deepscore/train_new_model
2026-03-31T13:10:54,663   copying ms2deepscore/train_new_model/train_ms2deepscore.py -> build/lib/ms2deepscore/train_new_model
2026-03-31T13:10:54,665   copying ms2deepscore/train_new_model/SpectrumPairGenerator.py -> build/lib/ms2deepscore/train_new_model
2026-03-31T13:10:54,667   copying ms2deepscore/train_new_model/inchikey_pair_selection.py -> build/lib/ms2deepscore/train_new_model
2026-03-31T13:10:54,670   creating build/lib/ms2deepscore/validation_loss_calculation
2026-03-31T13:10:54,671   copying ms2deepscore/validation_loss_calculation/__init__.py -> build/lib/ms2deepscore/validation_loss_calculation
2026-03-31T13:10:54,673   copying ms2deepscore/validation_loss_calculation/PredictionsAndTanimotoScores.py -> build/lib/ms2deepscore/validation_loss_calculation
2026-03-31T13:10:54,675   copying ms2deepscore/validation_loss_calculation/ValidationLossCalculator.py -> build/lib/ms2deepscore/validation_loss_calculation
2026-03-31T13:10:54,677   copying ms2deepscore/validation_loss_calculation/calculate_scores_for_validation.py -> build/lib/ms2deepscore/validation_loss_calculation
2026-03-31T13:10:54,680   creating build/lib/ms2deepscore/benchmarking
2026-03-31T13:10:54,681   copying ms2deepscore/benchmarking/plot_loss_per_bin.py -> build/lib/ms2deepscore/benchmarking
2026-03-31T13:10:54,683   copying ms2deepscore/benchmarking/plot_average_per_bin.py -> build/lib/ms2deepscore/benchmarking
2026-03-31T13:10:54,685   copying ms2deepscore/benchmarking/__init__.py -> build/lib/ms2deepscore/benchmarking
2026-03-31T13:10:54,686   copying ms2deepscore/benchmarking/CalculateScoresBetweenAllIonmodes.py -> build/lib/ms2deepscore/benchmarking
2026-03-31T13:10:54,688   copying ms2deepscore/benchmarking/plot_heatmaps.py -> build/lib/ms2deepscore/benchmarking
2026-03-31T13:10:54,690   running egg_info
2026-03-31T13:10:54,717   writing ms2deepscore.egg-info/PKG-INFO
2026-03-31T13:10:54,723   writing dependency_links to ms2deepscore.egg-info/dependency_links.txt
2026-03-31T13:10:54,726   writing requirements to ms2deepscore.egg-info/requires.txt
2026-03-31T13:10:54,728   writing top-level names to ms2deepscore.egg-info/top_level.txt
2026-03-31T13:10:54,767   reading manifest file 'ms2deepscore.egg-info/SOURCES.txt'
2026-03-31T13:10:54,773   adding license file 'LICENSE'
2026-03-31T13:10:54,778   writing manifest file 'ms2deepscore.egg-info/SOURCES.txt'
2026-03-31T13:10:54,814   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2026-03-31T13:10:54,814   !!

2026-03-31T13:10:54,815           ********************************************************************************
2026-03-31T13:10:54,816           Please avoid running ``setup.py`` directly.
2026-03-31T13:10:54,817           Instead, use pypa/build, pypa/installer or other
2026-03-31T13:10:54,817           standards-based tools.

2026-03-31T13:10:54,818           This deprecation is overdue, please update your project and remove deprecated
2026-03-31T13:10:54,819           calls to avoid build errors in the future.

2026-03-31T13:10:54,820           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2026-03-31T13:10:54,821           ********************************************************************************

2026-03-31T13:10:54,822   !!
2026-03-31T13:10:54,822     self.initialize_options()
2026-03-31T13:10:54,842   installing to build/bdist.linux-armv7l/wheel
2026-03-31T13:10:54,842   running install
2026-03-31T13:10:54,865   running install_lib
2026-03-31T13:10:54,892   creating build/bdist.linux-armv7l/wheel
2026-03-31T13:10:54,895   creating build/bdist.linux-armv7l/wheel/tests
2026-03-31T13:10:54,896   copying build/lib/tests/test_siamese_spectra_model.py -> build/bdist.linux-armv7l/wheel/./tests
2026-03-31T13:10:54,898   copying build/lib/tests/test_vector_operations.py -> build/bdist.linux-armv7l/wheel/./tests
2026-03-31T13:10:54,900   copying build/lib/tests/test_MetadataFeatureGenerator.py -> build/bdist.linux-armv7l/wheel/./tests
2026-03-31T13:10:54,902   copying build/lib/tests/test_data_augmentation.py -> build/bdist.linux-armv7l/wheel/./tests
2026-03-31T13:10:54,904   copying build/lib/tests/test_ms2deepscore_evaluated.py -> build/bdist.linux-armv7l/wheel/./tests
2026-03-31T13:10:54,906   copying build/lib/tests/test_fingerprint_utils.py -> build/bdist.linux-armv7l/wheel/./tests
2026-03-31T13:10:54,908   copying build/lib/tests/create_test_spectra.py -> build/bdist.linux-armv7l/wheel/./tests
2026-03-31T13:10:54,910   copying build/lib/tests/test_inchikey_pair_selection_cross_ionmode.py -> build/bdist.linux-armv7l/wheel/./tests
2026-03-31T13:10:54,912   copying build/lib/tests/test_train_ms2deepscore.py -> build/bdist.linux-armv7l/wheel/./tests
2026-03-31T13:10:54,914   copying build/lib/tests/test_converter_legacy.py -> build/bdist.linux-armv7l/wheel/./tests
2026-03-31T13:10:54,916   copying build/lib/tests/test_SettingsMS2deepscore.py -> build/bdist.linux-armv7l/wheel/./tests
2026-03-31T13:10:54,919   copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./tests
2026-03-31T13:10:54,920   copying build/lib/tests/test_fingerprint_similarity_computations.py -> build/bdist.linux-armv7l/wheel/./tests
2026-03-31T13:10:54,923   copying build/lib/tests/test_calculate_scores_for_validation.py -> build/bdist.linux-armv7l/wheel/./tests
2026-03-31T13:10:54,925   copying build/lib/tests/test_PredictionsAndTanimotoScores.py -> build/bdist.linux-armv7l/wheel/./tests
2026-03-31T13:10:54,928   copying build/lib/tests/test_validation_and_test_split.py -> build/bdist.linux-armv7l/wheel/./tests
2026-03-31T13:10:54,930   copying build/lib/tests/test_ms2deepscore.py -> build/bdist.linux-armv7l/wheel/./tests
2026-03-31T13:10:54,932   copying build/lib/tests/conftest.py -> build/bdist.linux-armv7l/wheel/./tests
2026-03-31T13:10:54,934   copying build/lib/tests/test_inchikey_pair_selection.py -> build/bdist.linux-armv7l/wheel/./tests
2026-03-31T13:10:54,936   copying build/lib/tests/test_plotting.py -> build/bdist.linux-armv7l/wheel/./tests
2026-03-31T13:10:54,938   copying build/lib/tests/test_embedding_evaluator.py -> build/bdist.linux-armv7l/wheel/./tests
2026-03-31T13:10:54,941   copying build/lib/tests/test_data_generators.py -> build/bdist.linux-armv7l/wheel/./tests
2026-03-31T13:10:54,943   copying build/lib/tests/test_utils.py -> build/bdist.linux-armv7l/wheel/./tests
2026-03-31T13:10:54,945   copying build/lib/tests/test_loss_functions.py -> build/bdist.linux-armv7l/wheel/./tests
2026-03-31T13:10:54,947   copying build/lib/tests/test_training_wrapper_function.py -> build/bdist.linux-armv7l/wheel/./tests
2026-03-31T13:10:54,950   copying build/lib/tests/test_load_model.py -> build/bdist.linux-armv7l/wheel/./tests
2026-03-31T13:10:54,952   copying build/lib/tests/test_CalculateScoresBetweenAllIonmodes.py -> build/bdist.linux-armv7l/wheel/./tests
2026-03-31T13:10:54,954   copying build/lib/tests/test_validation_loss_calculator.py -> build/bdist.linux-armv7l/wheel/./tests
2026-03-31T13:10:54,958   creating build/bdist.linux-armv7l/wheel/ms2deepscore
2026-03-31T13:10:54,959   copying build/lib/ms2deepscore/SettingsMS2Deepscore.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore
2026-03-31T13:10:54,962   copying build/lib/ms2deepscore/tensorize_spectra.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore
2026-03-31T13:10:54,965   creating build/bdist.linux-armv7l/wheel/ms2deepscore/wrapper_functions
2026-03-31T13:10:54,966   copying build/lib/ms2deepscore/wrapper_functions/plotting_wrapper_functions.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/wrapper_functions
2026-03-31T13:10:54,968   copying build/lib/ms2deepscore/wrapper_functions/__init__.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/wrapper_functions
2026-03-31T13:10:54,970   copying build/lib/ms2deepscore/wrapper_functions/training_wrapper_functions.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/wrapper_functions
2026-03-31T13:10:54,972   creating build/bdist.linux-armv7l/wheel/ms2deepscore/models
2026-03-31T13:10:54,974   copying build/lib/ms2deepscore/models/helper_functions.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/models
2026-03-31T13:10:54,975   copying build/lib/ms2deepscore/models/SiameseSpectralModel.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/models
2026-03-31T13:10:54,978   copying build/lib/ms2deepscore/models/io_utils.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/models
2026-03-31T13:10:54,980   copying build/lib/ms2deepscore/models/__model_format__.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/models
2026-03-31T13:10:54,982   copying build/lib/ms2deepscore/models/loss_functions.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/models
2026-03-31T13:10:54,983   copying build/lib/ms2deepscore/models/legacy_model_converter.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/models
2026-03-31T13:10:54,986   copying build/lib/ms2deepscore/models/load_model.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/models
2026-03-31T13:10:54,988   copying build/lib/ms2deepscore/models/EmbeddingEvaluatorModel.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/models
2026-03-31T13:10:54,990   copying build/lib/ms2deepscore/models/__init__.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/models
2026-03-31T13:10:54,992   copying build/lib/ms2deepscore/models/LinearEmbeddingEvaluation.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/models
2026-03-31T13:10:54,994   copying build/lib/ms2deepscore/MS2DeepScore.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore
2026-03-31T13:10:54,996   copying build/lib/ms2deepscore/__version__.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore
2026-03-31T13:10:54,998   copying build/lib/ms2deepscore/__init__.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore
2026-03-31T13:10:55,000   copying build/lib/ms2deepscore/fingerprint_utils.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore
2026-03-31T13:10:55,002   creating build/bdist.linux-armv7l/wheel/ms2deepscore/train_new_model
2026-03-31T13:10:55,003   copying build/lib/ms2deepscore/train_new_model/data_augmentation.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/train_new_model
2026-03-31T13:10:55,006   copying build/lib/ms2deepscore/train_new_model/TrainingBatchGenerator.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/train_new_model
2026-03-31T13:10:55,008   copying build/lib/ms2deepscore/train_new_model/inchikey_pair_selection_cross_ionmode.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/train_new_model
2026-03-31T13:10:55,011   copying build/lib/ms2deepscore/train_new_model/DataGeneratorEmbeddingEvaluation.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/train_new_model
2026-03-31T13:10:55,013   copying build/lib/ms2deepscore/train_new_model/__init__.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/train_new_model
2026-03-31T13:10:55,015   copying build/lib/ms2deepscore/train_new_model/validation_and_test_split.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/train_new_model
2026-03-31T13:10:55,017   copying build/lib/ms2deepscore/train_new_model/train_ms2deepscore.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/train_new_model
2026-03-31T13:10:55,020   copying build/lib/ms2deepscore/train_new_model/SpectrumPairGenerator.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/train_new_model
2026-03-31T13:10:55,022   copying build/lib/ms2deepscore/train_new_model/inchikey_pair_selection.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/train_new_model
2026-03-31T13:10:55,024   copying build/lib/ms2deepscore/fingerprint_similarity_computations.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore
2026-03-31T13:10:55,027   copying build/lib/ms2deepscore/vector_operations.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore
2026-03-31T13:10:55,030   copying build/lib/ms2deepscore/MS2DeepScoreEvaluated.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore
2026-03-31T13:10:55,033   creating build/bdist.linux-armv7l/wheel/ms2deepscore/validation_loss_calculation
2026-03-31T13:10:55,034   copying build/lib/ms2deepscore/validation_loss_calculation/__init__.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/validation_loss_calculation
2026-03-31T13:10:55,036   copying build/lib/ms2deepscore/validation_loss_calculation/PredictionsAndTanimotoScores.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/validation_loss_calculation
2026-03-31T13:10:55,039   copying build/lib/ms2deepscore/validation_loss_calculation/ValidationLossCalculator.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/validation_loss_calculation
2026-03-31T13:10:55,041   copying build/lib/ms2deepscore/validation_loss_calculation/calculate_scores_for_validation.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/validation_loss_calculation
2026-03-31T13:10:55,044   copying build/lib/ms2deepscore/MetadataFeatureGenerator.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore
2026-03-31T13:10:55,047   creating build/bdist.linux-armv7l/wheel/ms2deepscore/benchmarking
2026-03-31T13:10:55,049   copying build/lib/ms2deepscore/benchmarking/plot_loss_per_bin.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/benchmarking
2026-03-31T13:10:55,051   copying build/lib/ms2deepscore/benchmarking/plot_average_per_bin.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/benchmarking
2026-03-31T13:10:55,053   copying build/lib/ms2deepscore/benchmarking/__init__.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/benchmarking
2026-03-31T13:10:55,055   copying build/lib/ms2deepscore/benchmarking/CalculateScoresBetweenAllIonmodes.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/benchmarking
2026-03-31T13:10:55,058   copying build/lib/ms2deepscore/benchmarking/plot_heatmaps.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore/benchmarking
2026-03-31T13:10:55,060   copying build/lib/ms2deepscore/utils.py -> build/bdist.linux-armv7l/wheel/./ms2deepscore
2026-03-31T13:10:55,062   running install_egg_info
2026-03-31T13:10:55,096   Copying ms2deepscore.egg-info to build/bdist.linux-armv7l/wheel/./ms2deepscore-2.9.0-py3.11.egg-info
2026-03-31T13:10:55,109   running install_scripts
2026-03-31T13:10:55,123   creating build/bdist.linux-armv7l/wheel/ms2deepscore-2.9.0.dist-info/WHEEL
2026-03-31T13:10:55,126   creating '/tmp/pip-wheel-nh6nb1n4/ms2deepscore-2.9.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2026-03-31T13:10:55,129   adding 'ms2deepscore/MS2DeepScore.py'
2026-03-31T13:10:55,131   adding 'ms2deepscore/MS2DeepScoreEvaluated.py'
2026-03-31T13:10:55,134   adding 'ms2deepscore/MetadataFeatureGenerator.py'
2026-03-31T13:10:55,137   adding 'ms2deepscore/SettingsMS2Deepscore.py'
2026-03-31T13:10:55,138   adding 'ms2deepscore/__init__.py'
2026-03-31T13:10:55,139   adding 'ms2deepscore/__version__.py'
2026-03-31T13:10:55,141   adding 'ms2deepscore/fingerprint_similarity_computations.py'
2026-03-31T13:10:55,143   adding 'ms2deepscore/fingerprint_utils.py'
2026-03-31T13:10:55,144   adding 'ms2deepscore/tensorize_spectra.py'
2026-03-31T13:10:55,146   adding 'ms2deepscore/utils.py'
2026-03-31T13:10:55,148   adding 'ms2deepscore/vector_operations.py'
2026-03-31T13:10:55,150   adding 'ms2deepscore/benchmarking/CalculateScoresBetweenAllIonmodes.py'
2026-03-31T13:10:55,151   adding 'ms2deepscore/benchmarking/__init__.py'
2026-03-31T13:10:55,152   adding 'ms2deepscore/benchmarking/plot_average_per_bin.py'
2026-03-31T13:10:55,154   adding 'ms2deepscore/benchmarking/plot_heatmaps.py'
2026-03-31T13:10:55,156   adding 'ms2deepscore/benchmarking/plot_loss_per_bin.py'
2026-03-31T13:10:55,159   adding 'ms2deepscore/models/EmbeddingEvaluatorModel.py'
2026-03-31T13:10:55,161   adding 'ms2deepscore/models/LinearEmbeddingEvaluation.py'
2026-03-31T13:10:55,164   adding 'ms2deepscore/models/SiameseSpectralModel.py'
2026-03-31T13:10:55,166   adding 'ms2deepscore/models/__init__.py'
2026-03-31T13:10:55,168   adding 'ms2deepscore/models/__model_format__.py'
2026-03-31T13:10:55,169   adding 'ms2deepscore/models/helper_functions.py'
2026-03-31T13:10:55,171   adding 'ms2deepscore/models/io_utils.py'
2026-03-31T13:10:55,173   adding 'ms2deepscore/models/legacy_model_converter.py'
2026-03-31T13:10:55,175   adding 'ms2deepscore/models/load_model.py'
2026-03-31T13:10:55,177   adding 'ms2deepscore/models/loss_functions.py'
2026-03-31T13:10:55,179   adding 'ms2deepscore/train_new_model/DataGeneratorEmbeddingEvaluation.py'
2026-03-31T13:10:55,181   adding 'ms2deepscore/train_new_model/SpectrumPairGenerator.py'
2026-03-31T13:10:55,183   adding 'ms2deepscore/train_new_model/TrainingBatchGenerator.py'
2026-03-31T13:10:55,185   adding 'ms2deepscore/train_new_model/__init__.py'
2026-03-31T13:10:55,186   adding 'ms2deepscore/train_new_model/data_augmentation.py'
2026-03-31T13:10:55,190   adding 'ms2deepscore/train_new_model/inchikey_pair_selection.py'
2026-03-31T13:10:55,192   adding 'ms2deepscore/train_new_model/inchikey_pair_selection_cross_ionmode.py'
2026-03-31T13:10:55,194   adding 'ms2deepscore/train_new_model/train_ms2deepscore.py'
2026-03-31T13:10:55,196   adding 'ms2deepscore/train_new_model/validation_and_test_split.py'
2026-03-31T13:10:55,199   adding 'ms2deepscore/validation_loss_calculation/PredictionsAndTanimotoScores.py'
2026-03-31T13:10:55,201   adding 'ms2deepscore/validation_loss_calculation/ValidationLossCalculator.py'
2026-03-31T13:10:55,202   adding 'ms2deepscore/validation_loss_calculation/__init__.py'
2026-03-31T13:10:55,204   adding 'ms2deepscore/validation_loss_calculation/calculate_scores_for_validation.py'
2026-03-31T13:10:55,206   adding 'ms2deepscore/wrapper_functions/__init__.py'
2026-03-31T13:10:55,208   adding 'ms2deepscore/wrapper_functions/plotting_wrapper_functions.py'
2026-03-31T13:10:55,210   adding 'ms2deepscore/wrapper_functions/training_wrapper_functions.py'
2026-03-31T13:10:55,215   adding 'ms2deepscore-2.9.0.dist-info/licenses/LICENSE'
2026-03-31T13:10:55,218   adding 'tests/__init__.py'
2026-03-31T13:10:55,219   adding 'tests/conftest.py'
2026-03-31T13:10:55,221   adding 'tests/create_test_spectra.py'
2026-03-31T13:10:55,222   adding 'tests/test_CalculateScoresBetweenAllIonmodes.py'
2026-03-31T13:10:55,224   adding 'tests/test_MetadataFeatureGenerator.py'
2026-03-31T13:10:55,226   adding 'tests/test_PredictionsAndTanimotoScores.py'
2026-03-31T13:10:55,228   adding 'tests/test_SettingsMS2deepscore.py'
2026-03-31T13:10:55,230   adding 'tests/test_calculate_scores_for_validation.py'
2026-03-31T13:10:55,232   adding 'tests/test_converter_legacy.py'
2026-03-31T13:10:55,233   adding 'tests/test_data_augmentation.py'
2026-03-31T13:10:55,236   adding 'tests/test_data_generators.py'
2026-03-31T13:10:55,238   adding 'tests/test_embedding_evaluator.py'
2026-03-31T13:10:55,241   adding 'tests/test_fingerprint_similarity_computations.py'
2026-03-31T13:10:55,244   adding 'tests/test_fingerprint_utils.py'
2026-03-31T13:10:55,246   adding 'tests/test_inchikey_pair_selection.py'
2026-03-31T13:10:55,248   adding 'tests/test_inchikey_pair_selection_cross_ionmode.py'
2026-03-31T13:10:55,251   adding 'tests/test_load_model.py'
2026-03-31T13:10:55,253   adding 'tests/test_loss_functions.py'
2026-03-31T13:10:55,254   adding 'tests/test_ms2deepscore.py'
2026-03-31T13:10:55,256   adding 'tests/test_ms2deepscore_evaluated.py'
2026-03-31T13:10:55,257   adding 'tests/test_plotting.py'
2026-03-31T13:10:55,259   adding 'tests/test_siamese_spectra_model.py'
2026-03-31T13:10:55,260   adding 'tests/test_train_ms2deepscore.py'
2026-03-31T13:10:55,262   adding 'tests/test_training_wrapper_function.py'
2026-03-31T13:10:55,263   adding 'tests/test_utils.py'
2026-03-31T13:10:55,264   adding 'tests/test_validation_and_test_split.py'
2026-03-31T13:10:55,266   adding 'tests/test_validation_loss_calculator.py'
2026-03-31T13:10:55,267   adding 'tests/test_vector_operations.py'
2026-03-31T13:10:55,269   adding 'ms2deepscore-2.9.0.dist-info/METADATA'
2026-03-31T13:10:55,270   adding 'ms2deepscore-2.9.0.dist-info/WHEEL'
2026-03-31T13:10:55,271   adding 'ms2deepscore-2.9.0.dist-info/top_level.txt'
2026-03-31T13:10:55,273   adding 'ms2deepscore-2.9.0.dist-info/RECORD'
2026-03-31T13:10:55,276   removing build/bdist.linux-armv7l/wheel
2026-03-31T13:10:55,405   Building wheel for ms2deepscore (setup.py): finished with status 'done'
2026-03-31T13:10:55,409   Created wheel for ms2deepscore: filename=ms2deepscore-2.9.0-py3-none-any.whl size=116072 sha256=f174fecbb29ffcaa49552eb1b4c408861a0bc0433a67739eb1d35f402cd66ba9
2026-03-31T13:10:55,410   Stored in directory: /tmp/pip-ephem-wheel-cache-ax3qfj_m/wheels/0b/b4/4c/65cc8c415fe8310bbfc6b75dfa92748cda0d9bfeb01ae6d7bd
2026-03-31T13:10:55,424 Successfully built ms2deepscore
2026-03-31T13:10:55,431 Removed build tracker: '/tmp/pip-build-tracker-dt36r57n'