2026-04-01T12:21:10,245 Created temporary directory: /tmp/pip-ephem-wheel-cache-62xor4jw
2026-04-01T12:21:10,247 Created temporary directory: /tmp/pip-build-tracker-tj3ju6ni
2026-04-01T12:21:10,248 Initialized build tracking at /tmp/pip-build-tracker-tj3ju6ni
2026-04-01T12:21:10,248 Created build tracker: /tmp/pip-build-tracker-tj3ju6ni
2026-04-01T12:21:10,249 Entered build tracker: /tmp/pip-build-tracker-tj3ju6ni
2026-04-01T12:21:10,250 Created temporary directory: /tmp/pip-wheel-ro34j5ws
2026-04-01T12:21:10,252 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-04-01T12:21:10,255 Created temporary directory: /tmp/pip-ephem-wheel-cache-43yvoioq
2026-04-01T12:21:10,280 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-04-01T12:21:10,284 2 location(s) to search for versions of avogadro:
2026-04-01T12:21:10,284 * https://pypi.org/simple/avogadro/
2026-04-01T12:21:10,284 * https://www.piwheels.org/simple/avogadro/
2026-04-01T12:21:10,285 Fetching project page and analyzing links: https://pypi.org/simple/avogadro/
2026-04-01T12:21:10,285 Getting page https://pypi.org/simple/avogadro/
2026-04-01T12:21:10,287 Found index url https://pypi.org/simple
2026-04-01T12:21:10,543 Fetched page https://pypi.org/simple/avogadro/ as application/vnd.pypi.simple.v1+json
2026-04-01T12:21:10,604   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/c9/c5/e4a537b0ac185a15d6aaca242dbc8206d5883eeee607594f0bc37bae8521/avogadro-0.0.0-cp35-cp35m-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,605   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/ac/be/cdc616d7a849a73964edfc460e85fbc1e5e6f3d9bbfaa96db3e2db772299/avogadro-1.92.0-cp34-cp34m-manylinux1_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,606   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/28/36/5c93d075449505763dc4a728263a721d4bad48b8a1e0cd89e62e12e7d7ca/avogadro-1.92.0-cp35-cp35m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,606   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/e3/71/e7f0abc1d84b897c168b4295dc3ec50825f560a2a3a56c18272982214fd1/avogadro-1.92.0-cp35-cp35m-manylinux1_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,607   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/93/32/ff19acad40309b0c8c125aa5bcd757fc311ae28bcc615bc7c06fc3c212e1/avogadro-1.92.0-cp35-cp35m-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,607   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/db/c9/f1b8603f61feabb9bbeac51e498a6ae8ed04752c17ea922fd179da52d4a5/avogadro-1.92.0-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,608   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/03/1f/9d3d8a9c047bca561901793e310ec4c33a2e5dd76db78f3af314b038efe1/avogadro-1.92.0-cp36-cp36m-manylinux1_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,609   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/de/26/cd9d50bd5492680b8d499180e67146907e4ce4766dfd5442530955062776/avogadro-1.92.0-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,610   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/c6/62/84062c75aa043e71b9aecc80c5a13e324d05ea6c033ebcab23b5ff41f3b8/avogadro-1.92.0-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,610   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/ba/25/028d825251547729d1f01d131d9314a93412f6a0f65745e488a634edb37e/avogadro-1.92.0-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,611   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/f2/4b/5a1fd751ecde0d45232cd02e6ea7becdab4581722e18618592cb67219174/avogadro-1.92.0-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,611   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/2b/e1/f28acd75b7cfe3def889be8235f87e11e7cece6e0bdb086073aeb474aac5/avogadro-1.92.1-cp34-cp34m-manylinux1_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,612   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/ee/b1/0619db4e5f6b8371b4a29c88eca2362b8f8f9f1acb3224a19fd751a46095/avogadro-1.92.1-cp35-cp35m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,613   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/8f/40/582451447d58cea4f223225d716984b5cb076214f4c8cfb2a49159093865/avogadro-1.92.1-cp35-cp35m-manylinux1_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,613   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/cf/54/0a22125ce5f2c0d993bf9b03014b7c5f744954d27e4dbb58b8236017b232/avogadro-1.92.1-cp35-cp35m-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,614   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/89/d1/1fdcd41b64cc2103ddc21116d36d508b5733b0b622bef07e882c7eb4db86/avogadro-1.92.1-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,614   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/5c/9c/0e80779eeb760b5aec37e8857bda152d26c964851f8e4b83879649538d52/avogadro-1.92.1-cp36-cp36m-manylinux1_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,615   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/e6/71/4cd2226a5c9f8f91512ba3a4d2c43a1a6e769b2dbe09cbb045f3f8fa55de/avogadro-1.92.1-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,615   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/2a/8b/cae46858af4743fd1bd248c4f36bb78d5f7f2b3e1d8f284285e909be9b99/avogadro-1.92.1-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,616   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/aa/5d/c244055385039558e4df4d04e741b9646d4b9a7631691fb81dbd25298fb1/avogadro-1.92.1-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,616   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/ff/c8/03e4d4ad08a78592172f29f036075efbb555fae0e7502399cd20e3e0486a/avogadro-1.92.1-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,617   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/3e/1d/bdca7ab1054724ff985c3f172577256ca1a67d8ce8222bef1e94171e9c3e/avogadro-1.93.0-cp35-cp35m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,618   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/b0/2d/3dc13ea903ef13dd5a05864d76d97c4f67b4035ad58505295146400dc731/avogadro-1.93.0-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,618   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/05/59/6d387bf7463c5173ca9897ea94a6077563a1830d1d5bb43caed2d0a5b5b3/avogadro-1.93.0-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,619   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/98/d0/d0c8141c915ae4cd426cede045cb1b723401101766dedb6dd0b7681f569a/avogadro-1.93.1-cp35-cp35m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,620   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/52/d3/d906eb94acf266f941fdee82f89cae7607254b01657676e57642e6228807/avogadro-1.93.1-cp35-cp35m-manylinux2010_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,620   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/5f/c9/80613a8ed16927b0513554791731e1e25a44296d1135e6ea6c74aa9c0d5c/avogadro-1.93.1-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,621   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/5c/50/e6f37ba9d5e4922f24b4cb6d86e6778a4c31b766f95674b013c310371cd7/avogadro-1.93.1-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,621   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/29/9f/655055b42a6ad966a19a2f135712d06c0892ce0b77aecf8552182bd30673/avogadro-1.93.1-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,622   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/3c/28/ec4d97db4b2670196d4c3e3dd16a5eea19608990042c6ba5ddf61e5e4848/avogadro-1.93.1-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,622   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/b8/a3/473c7cc274820b3414ca917caa7ba3244ad15d9fc86b24d1dcdf531a5dc0/avogadro-1.93.1-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,623   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/d3/d6/2742a841308393d50748d4e5245710e73aa4dc26475be177d27a48f4c440/avogadro-1.93.1-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,623   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/4d/b1/72acce480c99a1f9c7ab0241bc944b0b1cb22ca75770345db0bd0b988fc7/avogadro-1.93.1-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,624   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/af/2c/6463d1bf835343c44f495e948864ef27ef75ee3c0494e4bbbd08cbc6f23a/avogadro-1.93.1-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,624   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/ee/ec/c7b5188a93b61db494047aa9d9af3039f7df210995bca0660a1b8e30a24d/avogadro-1.93.1-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,625   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/cb/d5/68c77fdc90490c8ac6ff7ef5d4432324fd9027c7a4a72e703002b0811da4/avogadro-1.93.1-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,626   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/98/5d/e3c489781f6be234da1b51c02f38a48bf82ad0b39a09bc4cae9cdc15c17b/avogadro-1.93.1-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,626   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/bc/af/e4f71c5231b1f83ad347731c7fb3e3c9166b3bf0c74721928eb2e4a8832f/avogadro-1.93.1-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,627   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/2e/e0/820de5f5219cf0415b9950e81ea8ca449ced16e729201a73e65058a75d9a/avogadro-1.95.0-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,627   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/1d/25/eeb12a232cc5d42f823cc70e0866ffb6a991171f0999493ace0ddd3ac6f4/avogadro-1.95.0-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,628   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/3f/5f/a461c6d6caeac009e1cefcd781af0f4b6f00dab4f4521bc0992508cda00e/avogadro-1.95.0-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,629   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/50/4a/6671dabded0fb43fb6d9eef591eda8138a9e42671c632bd421025e4a1a35/avogadro-1.95.0-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,629   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/57/7b/78d252704d14a5ac19cbaf14e5b69a0e815462d3ed78b72d4a57dfcaaf5a/avogadro-1.95.0-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,630   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/9e/d6/8bc22d685e039ebfc999de688028c693488674359a82acaf58c21e6e9352/avogadro-1.95.0-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,630   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/46/9a/aa9d5ad89e438f0fd93543163111cb374ad5cf2e087c882592279227f1fe/avogadro-1.95.0-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,631   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/69/71/fb58e3f4689600396df4c1709356939813a874130b61d88efb6b8fe4cd0a/avogadro-1.95.0-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,631   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/71/f6/e9cf54fec862fb48ece33341388aa9962fb6c2ed88028767b1f867277d26/avogadro-1.95.0-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,632   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/4a/99/2f6d584fcd790f34ee3d0abd1ecdba373a10a1b140b83703502d0be6bdcb/avogadro-1.95.0-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,632   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/a3/ce/ef0df6c4c0797c48e8cb2385527d25c90e41ef62d8efcbccb3980dcfc672/avogadro-1.95.0-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,633   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/76/ff/1871991a042280b7dad93eeb6dd75c87cea969cb82cd8023ffebe46084b6/avogadro-1.95.0-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,633   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/26/f3/9421b93d41a6b3ff826a6a784ce18b96de3b87e65826af11afef79feb690/avogadro-1.95.1-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,634   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/8d/03/234a2653c3a51ed6f56e4342911a64fa505c8eafc9e6856be4a4db62154f/avogadro-1.95.1-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,635   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/8d/d5/336ab0f8f21020e1a2ed6bd9626cba05bbe814673b9ae062d879738e273f/avogadro-1.95.1-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,635   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/12/87/594e5523c2883979471097f16c8501d01bfec57eb8d7f3d0aa180b9a8cb1/avogadro-1.95.1-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,636   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/89/28/ec65c40108ca37d41d60e2ad8670c9955b1140b2710cee17e24ca996d35b/avogadro-1.95.1-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,637   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/fd/5f/c1e8b1847c490fc85d46ca9b6aeaeb594cfbdccf250a4ea3c7e195c70dc2/avogadro-1.95.1-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,637   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/25/41/65f58ac85e522b53b246326ea279fbced021195080a3fb30fa10808a16c0/avogadro-1.95.1-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,638   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/75/ce/7cd33af4dfcf3c8368ee7bcaa31891c265d1ca20d3c3e29115e9febb31be/avogadro-1.95.1-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,638   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/be/4e/9370bfda3b2a4475445c82329faa35d57d045821b8b1772b2ddcb3661889/avogadro-1.95.1-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,639   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/32/e4/a071d3e0ade8a478b8d686d181f899559427f734903880425991ca9791e4/avogadro-1.95.1-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,639   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/09/39/0874fd166a794b2b3a61bafa65b868b4c86d48aee08b90e41aee49cbeab6/avogadro-1.95.1-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,640   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/d4/69/baf224e636100523ab0c77d17fc64090a9a4f9e3d2e89c92f4dd6e11324a/avogadro-1.95.1-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,640   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/e4/fc/293350ad34d254f3ecb89bd04f5c8e9376a890bd774689528bdad8eff992/avogadro-1.96.0-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,641   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/38/80/8dd032f7182b985214fc6fa548b56d684a723b707b6cbf2e99ead6d09a0c/avogadro-1.96.0-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,642   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/7b/46/d016fd2949b55a283754ad537bcc420257f8aac17c1257581b2fb00fd310/avogadro-1.96.0-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,642   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/5d/56/c21ac3cad0bf66fb975f126fe9f41a282790f38454d141034dab00482f70/avogadro-1.96.0-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,643   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/b7/d4/21eede73d4f7b85c7dfeb1abeea256d6bfd10a2a64ddd18b7eeb2af0b9b9/avogadro-1.96.0-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,643   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/73/cc/d585f424fdc7ba3b652a834d8b7d27ff99bdba54f94e76528bda61354674/avogadro-1.96.0-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,644   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/9a/a8/35575a4c7e2269c716d67ee589e018584ecd2f2c50fe2b4f87cf2dd2186b/avogadro-1.96.0-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,645   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/de/68/370e93a0acd04a634d466b3ef59c38fcaf24de60a690763d5548fbad8245/avogadro-1.96.0-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,645   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/51/c0/2b1ac4f02d805f0a17fc01106dd8bbd2083ab5ab12a255ef1de9a3a24cd7/avogadro-1.96.0-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,646   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/3e/d9/933103ef69e5e5f84b281f433d0e1c098269b243d61e789cb760a3dd35a0/avogadro-1.96.0-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,647   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/b9/7f/87798b9c0524125669f64297e7590596840a6444861735e133b9b4725ca7/avogadro-1.96.0-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,647   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/eb/80/7cf9e7f08ce14ac88b0ea53ec26f98dbaa85037e824a232cb34a23ff7a8b/avogadro-1.96.0-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,648   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/7d/b6/68410516cb433c3c1b8d3b7cd022323e3c210cb2c599d3c785ec0d50f48d/avogadro-1.97.0-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,648   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/0d/4a/81f3b29ce35080d3175100e951651f4131f44cee0a4fe6124c0e50e18d31/avogadro-1.97.0-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,649   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/6f/54/227250f0b076ae40e29a2ddfffcb511ba1d733bc72c751751d6bd02517f3/avogadro-1.97.0-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,649   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/cc/8e/d1d76022b2d48fbf4e753e8175d61bf3be17677023a8f3e7df6ed072eec7/avogadro-1.97.0-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,650   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/24/8d/f0e483b55acf8fb4e667c0227b59c053d199a1da3d7f9cb96a317f5c518e/avogadro-1.97.0-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,650   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/00/40/04514793c2e6782e6ca3d0c6ce142ee9f7a2430632f25e55dae60c3f8329/avogadro-1.97.0-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,651   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/71/fe/211d5282bfee5c7072b283f692626cfdbfe97e80d60c303f55d6dfcf9a3f/avogadro-1.97.0-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,652   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/12/78/aea1352ccf77243afe8da2a61034e42008f41289f458767c25994fea8426/avogadro-1.97.0-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,652   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/ba/df/54c7e2d2ecae5a2717165880d840b9319dbb2c274ff2d3a8f0073e42b873/avogadro-1.97.0-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,653   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/96/23/daea38520f520cc94ce5ca2b86f46d63f446bc43e1344092e07a859018c6/avogadro-1.97.0-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,654   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/49/d8/032dbae9e1b98bf8a86f3c074c2a10677905cb503fb0ca5834a717c7195e/avogadro-1.97.0-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,654   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/00/a7/dfe430e05130d59054470609e315fb256f10f48b58f12937794a4b20e45a/avogadro-1.97.0-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,655   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/2d/7c/44fe8e5de4b022e89f26097a0fe643f51ed12bb2757b11fbb287cdd7a28d/avogadro-1.98.0-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,656   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/4f/a6/d905514c22dd68000830add1832e0fbc03be127aa0b3267d9978068c07c7/avogadro-1.98.0-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,656   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/7f/8f/23494be85c03c83493a69287361c1076208e9527c032e722c158643f29e2/avogadro-1.98.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,657   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/79/3b/37b91da498c4c3dce14631833939514b1fbb83ce7d528d6e0c1494b1b5f3/avogadro-1.98.0-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,657   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/2a/fe/07a5b8592f08c23a976b77ea3c9611743fa00068ee62115d7c9eb193db76/avogadro-1.98.0-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,658   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/15/7c/cff6bfcafbbc7690a66dd94112dc49c472925d47173f7c417b56632d7518/avogadro-1.98.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,658   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/4c/9b/a4cf55213d62d30ca80f8e82a5734858a3d08e1d386b97385a6dc29e2dd2/avogadro-1.98.0-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,659   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/62/92/d6e305ca045d79fabee66ecae0687e55908bd17e82147227692a11cddb33/avogadro-1.98.0-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,660   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/12/e2/0b80814441074a163d22222c5e3527415e51218df1b55a352fb7cbe08606/avogadro-1.98.0-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,660   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/47/b1/a971fe802964cc4d468682ec83f8c91b1ef33b89322d2b117a1ee638c4ea/avogadro-1.98.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,661   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/8d/65/2913d79c19042100fcfba31fe99d616faad76352459eb61a4f8c228977c5/avogadro-1.98.0-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,662   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/d0/a3/668e960f47d73724d2d8fea01e87b9fce6fe4818d373313adfea2841276a/avogadro-1.98.1-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,662   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/0d/3b/9fe38a08493ee42a77c478a08fbca06bd5cbc86619d5ccb7abce136d9c46/avogadro-1.98.1-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,663   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/50/c0/d7280c6058ed95d78a9efb17b35f7750c516ecdfbe40801cf2bcd9d7ebe1/avogadro-1.98.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,664   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/78/0a/734b1fabe41627b59a53cb79fe604e726a2e51abe9a0f4017b2b6dc41dee/avogadro-1.98.1-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,664   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/9e/24/3577884b8ea47eab071449fb2dd5aec1bb70bea4ccbfe2c8e578d614184b/avogadro-1.98.1-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,664   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/e5/a7/58e1305de7a54b5739d3aee1fa9dea6b956afd50369a050fe3c70c9c1edd/avogadro-1.98.1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,665   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/0d/95/4bf7fb88a5ae2013be4428c847c697cef7569b586d4b3c82ce51966f72c4/avogadro-1.98.1-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,665   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/7b/90/8f15c741ce8ff317ca97a2a6d21501cee30c906c088c85b35cd52f06017c/avogadro-1.98.1-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,666   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/99/35/98dc474ffca2ca94bf15292ea4548f35596d2ff00bb7b75cc6b0673c1dc3/avogadro-1.98.1-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,666   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/de/01/5363fe4e3824f147749055610d4bdd692e5a5f71ef66ed2db40de7eefadd/avogadro-1.98.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,667   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/c5/b9/da1f0b59095da66c7804223894f637c2279d0c331d0ed07c80af1fa06363/avogadro-1.98.1-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,668   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/87/fd/ce2d8ba692c1fc08af03277e692cef3bfa7d0132bd9b88e341f04a1857dc/avogadro-1.102.0-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,669   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/bb/ad/8cb1fcedd463f907aa7f4171674c20043189b06e56507911673cc554323e/avogadro-1.102.0-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,669   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/97/3e/7f778bd236b7880570ff0d305a420d6be139e7ccd203652c23b300d35ad8/avogadro-1.102.0-cp310-cp310-manylinux_2_26_aarch64.manylinux_2_28_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,670   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/28/7c/66521c173517d3a866dbb686a63c67f833e5b3eaf7e607046a6730c20998/avogadro-1.102.0-cp310-cp310-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,670   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/9e/89/9613b6393b392e123fb4b5137eba749b7d8c43525330f59bab203f56ce04/avogadro-1.102.0-cp310-cp310-musllinux_1_2_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,671   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/e5/cb/5143744155ca8c5c1913bb345f9fa00871b95dcc6f5163c25713a0a7bd50/avogadro-1.102.0-cp310-cp310-musllinux_1_2_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,672   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/a4/3f/0f9e0aa718dbc53c75f3617186a288f4824fdea99f829e8530a4d526d271/avogadro-1.102.0-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,673   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/5e/71/4b285eddf32955ca7d1403da462b12e7f37d18e8d26d18f2e9a787f45961/avogadro-1.102.0-cp310-cp310-win_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,673   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/e7/14/d0abf0caaa40870ba68d4639f0d9b55712b9e09404cd1671141c382403c8/avogadro-1.102.0-cp311-cp311-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,673   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/be/40/bb60afe162966c70b97d719b57c7fedbbe1dbb46874fa0df16bd798b0971/avogadro-1.102.0-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,674   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/31/f5/362f44f4150b077b6569794885e7bf1738acf71b3af36200886955e1b2d1/avogadro-1.102.0-cp311-cp311-manylinux_2_26_aarch64.manylinux_2_28_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,674   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/e2/1b/27ea3160e4ea2c22a531732ce2c05fffa642800e81f8bb35796f9124b468/avogadro-1.102.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,675   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/94/0f/aee332e851ffcbefbcc1f412f14f17fce7a9e2b367f74ee1511dc0f5ba01/avogadro-1.102.0-cp311-cp311-musllinux_1_2_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,675   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/b5/5e/56b3f5fe4a74c67d1db243f86b3cd64cb2f295cfe374d515311876aee1ab/avogadro-1.102.0-cp311-cp311-musllinux_1_2_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,676   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/69/28/777ed93e64e50072f143e5411b7c0cd8aa89d50ba4e0cc7b03994e4ece6f/avogadro-1.102.0-cp311-cp311-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,677   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/71/57/700d678f657532eef56f9af324c028d3f871aa565c70c307cb3afb5cc5b4/avogadro-1.102.0-cp311-cp311-win_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,677   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/60/f4/f53c7057f68c696e13fa1f476792bc7fa4c4f6da3e903d20e39e43495b76/avogadro-1.102.0-cp312-cp312-macosx_10_13_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,678   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/9c/1f/d8cefc3e70d3862120e24e9a65a06e9331ddd5fd9951d5f948e6286a5133/avogadro-1.102.0-cp312-cp312-macosx_11_0_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,679   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/14/8c/28f4e5f040e7c01ecbe958d0e9dfb483a71017126598cb55d0d449e1d093/avogadro-1.102.0-cp312-cp312-manylinux_2_26_aarch64.manylinux_2_28_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,679   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/63/d4/a80c85902f4d227c085b390bb67f89db317844967bfc905c404cf8c05c89/avogadro-1.102.0-cp312-cp312-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,680   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/d3/c8/0615411f45644b071e080966856ec9ffb741a561ec89a29a6edf59085d50/avogadro-1.102.0-cp312-cp312-musllinux_1_2_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,681   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/31/ec/e6ee18f9481233ef9b1300b3c06728cdbe0dce9cc2881124277f50d42bf2/avogadro-1.102.0-cp312-cp312-musllinux_1_2_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,681   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/34/02/30da063678febd690769a8137bec0f43a81cbbb65aa006434e7a773222bf/avogadro-1.102.0-cp312-cp312-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,682   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/de/c8/5ed2653da513683cd9b2954e6ae2b234b215e6223ecdfdddca7941b243be/avogadro-1.102.0-cp312-cp312-win_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,682   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/70/50/d38dcda222723ddd9c9f179a8ddf863039e39744631a86c0a0a8ebbb0e19/avogadro-1.102.0-cp313-cp313-macosx_10_13_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,683   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/3a/14/89fd7999a2726c2723252d6594bd2433b41f1fed71b625e8fa7658b7a591/avogadro-1.102.0-cp313-cp313-macosx_11_0_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,683   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/34/c7/cfd0d70283a9b09ef99a402abe514d7839f226627405a563dce398fd3740/avogadro-1.102.0-cp313-cp313-manylinux_2_26_aarch64.manylinux_2_28_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,684   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/fb/de/a48dcae9b2391feca0e64cb6254d2f72453d7b0d5c6f8d4bc0858d79c63b/avogadro-1.102.0-cp313-cp313-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,684   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/3a/ba/86b6ef0f79605c0687b86d778629525ef6a93bfefe5f3cddc25fee955420/avogadro-1.102.0-cp313-cp313-musllinux_1_2_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,685   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/9d/b9/b5bc4bc52de8c62ada5e9da081c34797240ff63addf7c80c17333a946b58/avogadro-1.102.0-cp313-cp313-musllinux_1_2_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,686   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/dd/c8/8bd7b2df893ab7005e3cb0ff664f5adec820d3947d86b6599ba7d3133634/avogadro-1.102.0-cp313-cp313-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,686   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/69/ac/892986ad5a6067f298cbd801b4916ec40bb16676a11d7169f92843925756/avogadro-1.102.0-cp313-cp313-win_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,687   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/cb/f3/a322e9afc9e029c3431b87b106400fd0115766d1f5b68eab9fb653690456/avogadro-1.102.0-cp314-cp314-macosx_10_15_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,687   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/33/62/a1b8b4a9825d789db7dc8b245c9bfef046b3780c58abd8a759e10d4eef37/avogadro-1.102.0-cp314-cp314-macosx_11_0_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,688   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/0c/c6/092d701b875d38fefe74e23329e1f3f4cfdca8604368725928c801a92b81/avogadro-1.102.0-cp314-cp314-manylinux_2_26_aarch64.manylinux_2_28_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,689   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/5a/85/9f5605d88c1cd53cbdd91fe08380feb0e90886349dbc65e4e217966fc28d/avogadro-1.102.0-cp314-cp314-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,690   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/6b/6b/c8d07359c385e090f8e382b21cbbf4285e089d0a4ee26953c448ddf86e81/avogadro-1.102.0-cp314-cp314-musllinux_1_2_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,690   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/d6/52/900cd1644fc160a1cd8550a4d5d6c906b37de8ddbdfa4abc360f9851294d/avogadro-1.102.0-cp314-cp314-musllinux_1_2_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,691   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/97/0b/9a5e94de879dd44aff3fbb29f5a3288f26c7c37f7100310bcfabf949bc34/avogadro-1.102.0-cp314-cp314-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,691   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/a6/89/e2f17b40123aca42492b57c5d984467e0d028e22fb962702090c7eca4b36/avogadro-1.102.0-cp314-cp314-win_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,692   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/14/40/fcb43123a01c1e779290f4bb1661888dd8209addf6173224693e1fee7357/avogadro-1.102.0-cp314-cp314t-macosx_10_15_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,692   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/fd/2c/e57834ecff323a69cd72be683071d506136a7ee7b0f43ac4406b35470a42/avogadro-1.102.0-cp314-cp314t-macosx_11_0_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,693   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/95/80/65d2435b8aa3bb7e90fcf1244e77260df6e2a34ba71aea6b49d2a1048ddd/avogadro-1.102.0-cp314-cp314t-manylinux_2_26_aarch64.manylinux_2_28_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,693   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/83/e5/99cce7e325d354afcf93dc03c34f7b1fcbf0bb38a50329fe773eb8d37e7c/avogadro-1.102.0-cp314-cp314t-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,694   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/1c/8e/909a4ffdfcc3979c6bd93cd447c70830f0019bed9dbc00fd3a50d4b6a1da/avogadro-1.102.0-cp314-cp314t-musllinux_1_2_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,695   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/ef/21/3a81a4118efe4583f657b01ae7ad53f03824f4f12ba94f3fbda7902747be/avogadro-1.102.0-cp314-cp314t-musllinux_1_2_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,695   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/47/29/7de7dc7a03ebc85c4345e31d6accd6ff2f344dbb179b5501806236b669dc/avogadro-1.102.0-cp314-cp314t-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,696   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/52/de/fdd421bb3dcfb0fa7818a22ccb5c351edd0e84e00821a479724a6925cfb6/avogadro-1.102.0-cp314-cp314t-win_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,696   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/bd/ce/63acac1365cb5571f97e986ed90a16b36b2b26e57cdd427650b9fef53c02/avogadro-1.102.0-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,697   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/bf/a6/5c138331f4b93991198caadb33b31ae587a03cc5e12c62364bca8971cacc/avogadro-1.102.0-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,698   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/2a/18/a781d685590e604ee5b19fe2d5eec5239e13cd70ffb79212ba84bec8d846/avogadro-1.102.0-cp38-cp38-manylinux_2_26_aarch64.manylinux_2_28_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,698   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/a1/9e/42010f509bb1af5b356119e20305924a704ff6145eca9517997d4aac60fc/avogadro-1.102.0-cp38-cp38-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,699   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/2b/eb/1d9be90893712e1a4e1e2590f646f154f3e870a677f225a8a2c22a7e209e/avogadro-1.102.0-cp38-cp38-musllinux_1_2_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,699   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/ce/20/c23a6db02f40dc2b1474e144b4fed1e6180b94311b39d7dce135a1382dcc/avogadro-1.102.0-cp38-cp38-musllinux_1_2_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,700   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/87/ca/29b4318c0b97705fa6e64cb4eb26bdb3a51350288f8cf5d32c99f88e448f/avogadro-1.102.0-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,700   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/4e/5a/2463d12743544a9c0608e0d17af8ef8046c0f06683399bbb32b3d8c61320/avogadro-1.102.0-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,701   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/24/11/15ac51bb02ca7000f039d1e3147c60fdb882fa11fb4fe4b3f7346cbf685e/avogadro-1.102.0-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,701   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/bc/5a/818dae154a49d700bc45b70b62cb61b8cc62d3eca74e3b53477dc7d6191f/avogadro-1.102.0-cp39-cp39-manylinux_2_26_aarch64.manylinux_2_28_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,702   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/5e/28/8e234424f49a69f9bb17c70a6c96aaed30314aafa8f1d235a5fdb1a3a262/avogadro-1.102.0-cp39-cp39-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,703   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/d4/37/094fb0c2909fbbf90f35f4d951b8e6a84c1406a0a52832b94744760e849f/avogadro-1.102.0-cp39-cp39-musllinux_1_2_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,703   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/22/ff/8fb7f00659c43dccbc52503c453385226eed37a4db58cc54ade3597a32b0/avogadro-1.102.0-cp39-cp39-musllinux_1_2_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,704   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/b8/48/df7c7ee8be25e86b668a821a20a71be1a9376a96bf10ceaeba4db0750665/avogadro-1.102.0-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,704   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/c6/94/86513990b625c78b6f3f0e67bc825dcad54fc34d699c2ff9cf0e7841f836/avogadro-1.102.0-cp39-cp39-win_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,705   Found link https://files.pythonhosted.org/packages/90/c1/ccc9ce5f4427607c4643ca6507551552a897b4c80d02f87f043014326d6e/avogadro-1.102.0.tar.gz (from https://pypi.org/simple/avogadro/), version: 1.102.0
2026-04-01T12:21:10,706   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/dc/3c/1b6f313d72e4814a5fd4aee5d873fb20a412df7f10b9d383d7757ee9a4c7/avogadro-1.102.1-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,707   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/b5/5d/ceb5ee0bf0d34d3fab58da57d780a24494929f37cbbaf9727b6808f1bc5b/avogadro-1.102.1-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,707   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/c0/87/5654671c31c45361c5a581378dd42a176614f245e4e58f48150763281ffa/avogadro-1.102.1-cp310-cp310-manylinux_2_26_aarch64.manylinux_2_28_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,708   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/4d/af/08c2e780910bf841b4ffc3939fbcd87509e4d252cde76bc18394fcc4fa86/avogadro-1.102.1-cp310-cp310-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,708   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/94/55/9a828109eddfa6847609f67be65c229c265fa0e7743374946bfb1ef8aa08/avogadro-1.102.1-cp310-cp310-musllinux_1_2_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,709   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/71/b9/abb132c09ab31d14bffe04c3435f052b0c7f285b56d884b659a8bc6c985b/avogadro-1.102.1-cp310-cp310-musllinux_1_2_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,709   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/ca/79/193074ba2a312985d6cdd05565276f1ecf4df48a2c2af9876d88788837cb/avogadro-1.102.1-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,710   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/c9/b6/591026bec60e85d49a3f597910c23224dc8058d1a66cc5b043b9f9d839cc/avogadro-1.102.1-cp310-cp310-win_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,710   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/d7/27/fd10ec7f88048b16c75de754abdb1fdee6c091a5c5b44f1286a2e48aac48/avogadro-1.102.1-cp311-cp311-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,711   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/45/75/40f1f2886a6024bd51f98035601ce269c846a4c2b5a76eacc867f8d9dedf/avogadro-1.102.1-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,712   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/f0/10/b65e04c8d882c2746b4689ee406a0ce17e22008dedca735b667f535953be/avogadro-1.102.1-cp311-cp311-manylinux_2_26_aarch64.manylinux_2_28_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,712   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/87/26/0b03546cf97558159d061ad220b08fa83af6e7b20f26b490138a6cc0659b/avogadro-1.102.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,713   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/76/03/839775e1840a185cbc60e087eed11187390e1ea855f96075484153e3481f/avogadro-1.102.1-cp311-cp311-musllinux_1_2_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,713   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/22/5a/c38f5212222326fe3f8acf0b3f104fcab7983393aa9ecbfbd71ffedc7a3c/avogadro-1.102.1-cp311-cp311-musllinux_1_2_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,714   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/3f/e6/e27df5315b13428937e09a68d1c0fdd0e448c1c2fa70c9a3a11c632c6de5/avogadro-1.102.1-cp311-cp311-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,715   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/11/fd/73ffeeb983a6f6d1d0769c508573aa8d249300e7bcfa69b9be2c5577d5ad/avogadro-1.102.1-cp311-cp311-win_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,715   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/fc/f0/b14842ea7a15ab0283db187287e7724ac0c24aa46c540bd2e35a6cac41ca/avogadro-1.102.1-cp312-cp312-macosx_10_13_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,716   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/49/c4/689d91f0dd876566fd555e3303f4b84102ca193a513c9fa2e9f0c1c0299e/avogadro-1.102.1-cp312-cp312-macosx_11_0_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,716   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/26/af/10087e4f4fd97360a558eb295c7ed16e5ba3bef29925824ce9b5e080d5cf/avogadro-1.102.1-cp312-cp312-manylinux_2_26_aarch64.manylinux_2_28_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,717   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/01/ad/1173aa7d8ceebe41bd3ef9993a039060db0a64d7b2bae9f04844dd6f9e22/avogadro-1.102.1-cp312-cp312-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,717   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/8f/cf/35c63bbc0cdf5d4df9a61d1a138e92942a9bf6d25a6ade542330ecc5be89/avogadro-1.102.1-cp312-cp312-musllinux_1_2_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,718   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/c1/a8/9f7ebf631e0973d6833fac16edc255528278213844702de69d5cd56a5689/avogadro-1.102.1-cp312-cp312-musllinux_1_2_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,719   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/57/56/aae0bc4c7832b4e204f81c2f87ac7e49ae9717a0ac13ee78776f8e06ef97/avogadro-1.102.1-cp312-cp312-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,719   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/c9/39/eeaaa0fca5387a886a49ab301ff2e8807e3536a736c55e7fd9fd1240c700/avogadro-1.102.1-cp312-cp312-win_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,720   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/0c/24/20d42adee98c97408aef62e57f9ad4a1028bed232de72f384a2d8d38f4fb/avogadro-1.102.1-cp313-cp313-macosx_10_13_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,720   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/34/18/d8b1513fb190303e5b5b99066deefe80afbd026b879fa5eed7a9309a2cfd/avogadro-1.102.1-cp313-cp313-macosx_11_0_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,721   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/9f/aa/9259f18f02c6004078d37c991a534532c29073e2aeaf84247756bdea40c0/avogadro-1.102.1-cp313-cp313-manylinux_2_26_aarch64.manylinux_2_28_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,722   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/4e/3d/5de6c1a9d029fe28c9d365f71bfb704e592aaf71a8e9b13e6ce4fb475474/avogadro-1.102.1-cp313-cp313-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,722   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/e2/8c/de6a118c26b5960c79307514621199d84ab6edd2966bbde4284e0468ad92/avogadro-1.102.1-cp313-cp313-musllinux_1_2_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,723   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/8d/36/9a32ba0088ced2f35c6eb9e78e7dab843073938208559fcd7e54a9aed13a/avogadro-1.102.1-cp313-cp313-musllinux_1_2_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,724   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/53/8b/a87a2cfa541265a4cf0b5672cdfc5421757b4d4c2654aa262cc89b71feae/avogadro-1.102.1-cp313-cp313-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,724   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/41/d6/b215cde376a7e7ff1c5a2ecf427e3aa10355d3bc6c1b5b0e30318ddd52f5/avogadro-1.102.1-cp313-cp313-win_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,724   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/5b/38/ff75598f3e0bc48a4659894eeece2d773978c5d26385d751635811f494ca/avogadro-1.102.1-cp314-cp314-macosx_10_15_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,725   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/fc/5e/43bbc63546d7f66c75fd50d389f9512ecf731230eb34d4905acf1165d4df/avogadro-1.102.1-cp314-cp314-macosx_11_0_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,725   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/99/39/ce0d380c28bec4daff103d5b3577371912f196af1a07953de8a6a46a1527/avogadro-1.102.1-cp314-cp314-manylinux_2_26_aarch64.manylinux_2_28_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,726   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/62/da/b007ae31b2fd3a0c8eeac4879e2dee09f69d9bba5a5b5b52d576d65b35a6/avogadro-1.102.1-cp314-cp314-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,726   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/8e/58/aec8afa16587db8641b25bb2f1be6d598b0e10eaf671221faaa415f0b2eb/avogadro-1.102.1-cp314-cp314-musllinux_1_2_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,727   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/43/a8/100bbc0a6976d39a2f44c846974abbbb3e3bd951d543bc9d99f6eefeb7be/avogadro-1.102.1-cp314-cp314-musllinux_1_2_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,728   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/db/d1/5dfad33d9bc6f0c9d7ebfe259e8e173b027619192cc7ae32437c1dae68eb/avogadro-1.102.1-cp314-cp314-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,728   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/ae/1f/942678d3390a4158bc33ef5287f000e28d031641ccb6ddf4f17010732acd/avogadro-1.102.1-cp314-cp314-win_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,729   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/24/c0/b5a156e38f0d9ad34b28dfddfb68b05a3cfb61c2fb41616e038e8deb32df/avogadro-1.102.1-cp314-cp314t-macosx_10_15_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,729   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/31/d4/6023e533128b405b639904004f361a731177a21debd4f1cafe56a13a1ec8/avogadro-1.102.1-cp314-cp314t-macosx_11_0_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,730   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/61/45/f47a542500eaee9336ffbe3544a0b44bf9e7716b8d9b138df655795893ff/avogadro-1.102.1-cp314-cp314t-manylinux_2_26_aarch64.manylinux_2_28_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,731   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/38/39/cf66351e3760bcec7fad49e02c02f015f16901ef8b0d1bf8d9063f7d6105/avogadro-1.102.1-cp314-cp314t-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,731   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/ab/dc/6b8fa3db7671558caa3030741723dc7fcf21830d97347b862bea40fa6ca2/avogadro-1.102.1-cp314-cp314t-musllinux_1_2_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,732   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/26/c9/e9e855a6a61ad559f193a9867abfe954f5b53f55bbff8511450385fb3a93/avogadro-1.102.1-cp314-cp314t-musllinux_1_2_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,732   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/9b/01/105309a1e91af90e77b136f237a64a0af7ebca6544ac62278797432c113b/avogadro-1.102.1-cp314-cp314t-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,733   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/69/35/fea1b5cae4b45bad2389b535a3f48a6ecb9c57e4e8360acb2ef0237a0909/avogadro-1.102.1-cp314-cp314t-win_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,733   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/1f/87/c7cc3473e171f80e0af70ceb5816c2b7cac230e1fb842d497ea08201bd19/avogadro-1.102.1-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,734   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/5e/8a/07bd887871023a1fee78b9f504d72280b4a9469063d0d29dca25b12c2648/avogadro-1.102.1-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,734   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/00/ed/ec7d60c62d117fa7e60501d49748db25811b3c3e8ddb748d7244e952c92c/avogadro-1.102.1-cp38-cp38-manylinux_2_26_aarch64.manylinux_2_28_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,735   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/aa/11/8551ead81923e10ab1ed77df1ffa5eac537752a0a7c659c75f13ee556c1a/avogadro-1.102.1-cp38-cp38-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,736   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/f6/a9/be892c6b32062abe6531f4e1da689e77df48062636db1cacb41eff2af3e0/avogadro-1.102.1-cp38-cp38-musllinux_1_2_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,736   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/49/28/888174aec82f15363f907a984473663685359c25032dfc9b309076be2e98/avogadro-1.102.1-cp38-cp38-musllinux_1_2_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,737   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/33/8d/abbd6fb2e21dac2fcf81b1e3d283cca7b761b3701534bf3dec1bd7e19476/avogadro-1.102.1-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,738   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/fc/af/6ec1e47a3193791ede445be1d4ca06fe2da63bd036fa3448e64c4b7330df/avogadro-1.102.1-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,738   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/f2/5d/4b2f67289eba9e6608e01879ae082fa21d7a6aff410ca4ea69a647a047dd/avogadro-1.102.1-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,739   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/b4/1b/6dd6ee9ddda60306a0123076e54159f2bd9258fd04af3e37f6927e4897c7/avogadro-1.102.1-cp39-cp39-manylinux_2_26_aarch64.manylinux_2_28_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,739   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/20/0d/ae97642132c222fe68785b7ba4592074919e289437c7b23b025107def9ff/avogadro-1.102.1-cp39-cp39-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,740   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/83/a4/ef396088944ac64c8179d5d89248ce1e5eb5b89434d9592b05ae8bcd90e8/avogadro-1.102.1-cp39-cp39-musllinux_1_2_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,740   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/0d/fe/c9fa9fde74b640d781f19e900c33dde680a21e5b7ad8750520dc1691d4d2/avogadro-1.102.1-cp39-cp39-musllinux_1_2_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,741   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/bf/11/b09329c1e8aaa2302758b27e98ffdfa3e01a4ea8022a5dc91311856466b0/avogadro-1.102.1-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,741   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/cb/3e/b4f8732e061dfb627a804f66530b38059cde7260150dfdf0d08e8b965281/avogadro-1.102.1-cp39-cp39-win_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,742   Found link https://files.pythonhosted.org/packages/ee/76/65410e0873cfdf149642b6bccee0de418913bae268ef7fa9907eebf6b9d2/avogadro-1.102.1.tar.gz (from https://pypi.org/simple/avogadro/), version: 1.102.1
2026-04-01T12:21:10,742   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/ff/d2/0bbfce85ea8fb463d9957ba222129dd9192d98851aa61cdf714794750a98/avogadro-1.103.0-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,743   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/73/46/6af7f8f25994a3ce72ca27088e0f1076e84dda4b0bb33e334946ce591a7c/avogadro-1.103.0-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,743   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/74/7f/a9df1aba9294880113ff8d4d0a2eb4a35700b4fe5c2394770cac560b4d16/avogadro-1.103.0-cp310-cp310-manylinux_2_26_aarch64.manylinux_2_28_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,744   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/39/52/99890e00f09c5a07e414d4f2a6b111ce9c3387dc2d93e2f352458c039064/avogadro-1.103.0-cp310-cp310-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,745   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/a4/5a/7089c6f3e6710ca95e397da446581502f9865468579d92654cfa0ac2f666/avogadro-1.103.0-cp310-cp310-musllinux_1_2_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,745   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/d6/f8/ab9b59ea73e1cdfd19654429a8819d056809dc9e44680accaee81ae30221/avogadro-1.103.0-cp310-cp310-musllinux_1_2_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,746   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/56/71/e59a9be1bc7f47b47fca83f23ec7acfb6af617d66885a388e39268937253/avogadro-1.103.0-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,746   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/d2/be/b6567ea97cd952f24b0cb3979a7faf89c55d78fa89d0f2ce0056162f8e93/avogadro-1.103.0-cp311-cp311-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,747   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/46/8b/5d492cb893b253d7bde64e0219df8fd376d56ae6df3a1a7f1fca6d9f2ab5/avogadro-1.103.0-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,747   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/03/3d/7d30da495664e191c617e0e2710faaa9d4c6b664ae783889765e65df5771/avogadro-1.103.0-cp311-cp311-manylinux_2_26_aarch64.manylinux_2_28_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,748   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/79/fa/59bde1ca0b3385a6072df12b69d6c10c525802943ca13758f4039869b8a8/avogadro-1.103.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,749   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/80/6b/d243d9c912c7784db85bcb8ef3e0a9c0dc2958e40148d7f20b752f45eac0/avogadro-1.103.0-cp311-cp311-musllinux_1_2_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,749   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/b5/5b/5b2433cd1fa9bc9ad10b92860932cc2cf681e872b78dfe2e973d41f3d1aa/avogadro-1.103.0-cp311-cp311-musllinux_1_2_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,750   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/aa/55/8fa396a611c9bf39df7e3b6a6dc81f2e676bff00683c1c22f1b6e23bfc8f/avogadro-1.103.0-cp311-cp311-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,750   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/5d/f4/b1ddf08d4f9b1539d5451bb77653ab9e3d76684b8cd5804f30d3d3151b82/avogadro-1.103.0-cp312-cp312-macosx_10_13_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,750   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/4e/d0/6d4b3d3d1ddf29061b86d57d70e780d79efb72497fc5cd450148847a7d82/avogadro-1.103.0-cp312-cp312-macosx_11_0_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,751   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/9a/d9/cb5de1eb44e011794c06ad3e995503c6f125d5360f5d96ec981225e629f4/avogadro-1.103.0-cp312-cp312-manylinux_2_26_aarch64.manylinux_2_28_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,752   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/3b/db/f65d0e056233f345376065931e19d9302b0dba4697859938af47293c39ad/avogadro-1.103.0-cp312-cp312-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,752   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/58/e0/69850ab18f8b010ce674d9ca052cdf4930aaaac25289cc17768d60e382cf/avogadro-1.103.0-cp312-cp312-musllinux_1_2_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,753   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/2c/1d/f84faa33f2d3848fbdf99bfcec6c14ab533f6cf8619c3e96d8ff60cdbdcb/avogadro-1.103.0-cp312-cp312-musllinux_1_2_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,754   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/64/a6/0afb2ad8fdc368bd7417b0f2bfa8fbadbaf6564ad5f503a424a473838bc2/avogadro-1.103.0-cp312-cp312-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,754   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/25/bb/edb9f4896d621e7ddda07440069840219c718fa5060a8887663b6915e309/avogadro-1.103.0-cp313-cp313-macosx_10_13_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,755   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/9f/6d/883d27fe10c98561b0ddcbe6690d1a5d04dec594db7a1ed5432ef91f9b52/avogadro-1.103.0-cp313-cp313-macosx_11_0_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,755   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/05/4c/896dd42c47d8482fe5b49ab668faf027435419c4cdd3beb9fc583cc9d71e/avogadro-1.103.0-cp313-cp313-manylinux_2_26_aarch64.manylinux_2_28_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,756   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/48/28/de42ea6eb0aa43f83af67df45b2122371ec8b853f555647fbca746987830/avogadro-1.103.0-cp313-cp313-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,757   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/d4/30/2b6a2f0e02f91f00261755b5f138df2b576c05413bf564feb4c2c956e26e/avogadro-1.103.0-cp313-cp313-musllinux_1_2_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,757   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/d3/7e/2c5aa15ba472a2f8574efa5071c154af4dcfc84ad91b1488ba3e019d58d1/avogadro-1.103.0-cp313-cp313-musllinux_1_2_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,758   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/94/f6/2b997bb55a177581000e28dd2be21d663476ff02b618c7f28f44d3f08d30/avogadro-1.103.0-cp313-cp313-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,758   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/6f/b2/86512d8d60c2b6c0f2a2a087557cafa3439567cc739dd7c344201c5f9eb7/avogadro-1.103.0-cp314-cp314-macosx_10_15_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,758   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/8f/db/037843aa4fe62bb61ab1ce3ec7438f15363b6dc81042c44c453287dad3de/avogadro-1.103.0-cp314-cp314-macosx_11_0_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,759   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/27/8a/4a620fba83ddb66c4f814018f802a3288f4f2cc7fc038f18b6d959f686d4/avogadro-1.103.0-cp314-cp314-manylinux_2_26_aarch64.manylinux_2_28_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,759   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/d4/35/d05009d7c22758f2dbe8dde987eceb7d9455337fbb4374709ad76115bc21/avogadro-1.103.0-cp314-cp314-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,760   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/fe/e1/5a3f690f3f9928188fcc041d7f6ea6c7b689da9a26178c560f43c91da5ca/avogadro-1.103.0-cp314-cp314-musllinux_1_2_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,761   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/dd/8b/fea3ae504c60f7f919a289ad9f480b37fbc0f0360053b5556824d228551e/avogadro-1.103.0-cp314-cp314-musllinux_1_2_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,761   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/b5/e4/bb0bdbd4e6ea616f372f2849829661aa845fa99ecb11f4c5faa8186591f9/avogadro-1.103.0-cp314-cp314-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,762   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/0a/84/2d134e943de191a583a3cecd9a6e3c7b48c7e3c5b694bda3d76a75ede37c/avogadro-1.103.0-cp314-cp314t-macosx_10_15_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,762   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/cc/c6/ac69bd0d87c8c0c722fa95a6d1cb8e9f427fa36756b9ea901a84a969b736/avogadro-1.103.0-cp314-cp314t-macosx_11_0_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,763   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/4b/a6/f15c1c4062b6e361bf55167fbe916fae03f39af4752770f469e1aa4780bf/avogadro-1.103.0-cp314-cp314t-manylinux_2_26_aarch64.manylinux_2_28_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,764   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/d1/94/a58d2a1e3f62a43e405da0549f091a69bdaca1b30a09d80b759d56c8f72a/avogadro-1.103.0-cp314-cp314t-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,764   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/1d/eb/4ad174acf46cf5a8956075ece83795edb9407aad09cbeac20fbc0e1b89fe/avogadro-1.103.0-cp314-cp314t-musllinux_1_2_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,765   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/0e/1d/21dd9e150971524e60884d8e7a254649ea07fb60c557ac872daab168932f/avogadro-1.103.0-cp314-cp314t-musllinux_1_2_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,765   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/f8/b4/0d0cec5168e401d3c7b816eabdd8f60d22c8d24ffe9f817e00445d6a5ed1/avogadro-1.103.0-cp314-cp314t-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,766   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/bf/d0/39b9c6f31090115f465b83656bb75842dd7eb5e0d5bc9ae4f5356503f4ed/avogadro-1.103.0-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,766   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/32/9b/b6901d351dbb1b1bc89e74826b33384a844b601c16b5107c3feff5937fad/avogadro-1.103.0-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,767   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/93/91/337e7d7ad64dffe240551d1707164974927dd49587dd5431b34e22541f48/avogadro-1.103.0-cp38-cp38-manylinux_2_26_aarch64.manylinux_2_28_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,767   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/b9/11/8e2f895de3b9f2ad13d760fc53d8d089ea50d66f40020c8a632d98102f38/avogadro-1.103.0-cp38-cp38-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,768   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/19/9f/0ad64c8c77d72c0dbe20327d6543a2fa7852343d51b5df191bd9ac0c61a7/avogadro-1.103.0-cp38-cp38-musllinux_1_2_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,769   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/a7/b7/c3664f217720b7687d0ec5efafc7ccbcb2f3536f6d3e9331010e562430cf/avogadro-1.103.0-cp38-cp38-musllinux_1_2_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,769   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/8f/f6/912dbfca4f1f11e597b1aae4fc65789ee19b7cca5c020706cd40e7f1a94c/avogadro-1.103.0-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,770   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/af/eb/6b40abb0cbce0d0fce4f769d274e508cf1101f374d7a70418ecf17ef9096/avogadro-1.103.0-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,770   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/f2/40/125017b6546888d5c3e3517c92ae08b8d964c4ced58af820320c99db2190/avogadro-1.103.0-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,771   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/a8/15/7b9b2e4d6e7d16d7edf421a58652b20bca19cce922e374c22b270288d203/avogadro-1.103.0-cp39-cp39-manylinux_2_26_aarch64.manylinux_2_28_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,771   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/67/c3/594e2f9e715ec19f59c6becd57bee526172cfcd0a12f99ff33b306cc15da/avogadro-1.103.0-cp39-cp39-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,772   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/af/dc/0b1fcb6df25991d805f29fb0a5052bad9506ccd24406c9bd39321e0d54aa/avogadro-1.103.0-cp39-cp39-musllinux_1_2_aarch64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,773   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/52/a2/7d1fd9539338a4e862fe6f1e12ece5c828db5ecab5934d372724da410f8a/avogadro-1.103.0-cp39-cp39-musllinux_1_2_x86_64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,773   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/a1/d4/2c6d683a3cddc4f4b3916e9ebf4395e04bfe02d207e2eee320a17d76ee37/avogadro-1.103.0-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/avogadro/)
2026-04-01T12:21:10,774   Found link https://files.pythonhosted.org/packages/55/14/711ea02a22e622346e8e6ddf01f238f438038b7c5efd2bfab4d5d4398650/avogadro-1.103.0.tar.gz (from https://pypi.org/simple/avogadro/), version: 1.103.0
2026-04-01T12:21:10,774   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/72/37/8559157f7b3ec61f439f02a7e989fe94096c2dd0da355cddffd586c4b814/avogadro-2.0.0-cp311-cp311-macosx_10_9_x86_64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,775   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/05/22/0bc6d81c448896647744a9f6417d84ff23bc3b06941937bf1b8320dc9f37/avogadro-2.0.0-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,775   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/d1/28/5568759983265b01773f98c8bfc8aca4ba4b3d9a3c4a53ed09b18018fc7f/avogadro-2.0.0-cp311-cp311-manylinux_2_26_aarch64.manylinux_2_28_aarch64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,776   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/12/a2/3cbfdf3e98133ca51e3b29c35fc9771d4958e1c905004b39c96ae8631b09/avogadro-2.0.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,777   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/be/9e/79a84f4c5105c725b5ee775b0345d9035e6923a00bfcb864872e4d19d6be/avogadro-2.0.0-cp311-cp311-musllinux_1_2_aarch64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,777   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/4f/f8/1b967ed799459a58f783a358114817c7c9de924df349efee1147aaa32af9/avogadro-2.0.0-cp311-cp311-musllinux_1_2_x86_64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,778   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/b6/a3/3b5aaf037bf692972d6d48ecf774ba06b850645b4163736a5c237cc66ca6/avogadro-2.0.0-cp311-cp311-win_amd64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,778   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/a4/64/a0278d6a6c36a6403dcd5a340c846ca76899da36ab54626cb52951730dc9/avogadro-2.0.0-cp312-cp312-macosx_10_13_x86_64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,779   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/a9/b0/b1569b83f1929f3c2339816741993e87d821dec7f9c61625239daec4c46f/avogadro-2.0.0-cp312-cp312-macosx_11_0_arm64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,780   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/c1/87/587ce8304de802de5aa1b4d2af07f36bba0e6505fad647db2e511cb886de/avogadro-2.0.0-cp312-cp312-manylinux_2_26_aarch64.manylinux_2_28_aarch64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,780   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/60/0c/5003af34d46f721f5f048adbf448fc2a7b537c0955ac1f35c01da2f34677/avogadro-2.0.0-cp312-cp312-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,781   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/3b/c7/96929e6e38c8079d62c7e8d73bf52c1068365c9e023d5aa743c4e8efd2bb/avogadro-2.0.0-cp312-cp312-musllinux_1_2_aarch64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,781   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/41/66/f9f30aa78b2d551227ac55854690a0fdd0406bcb50a098d4ea7809c24b7e/avogadro-2.0.0-cp312-cp312-musllinux_1_2_x86_64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,782   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/68/37/91d52a23b989e2768900c2bf5f1417f8f8434c8d0c45f31cf2d64e539485/avogadro-2.0.0-cp312-cp312-win_amd64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,782   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/15/a2/1be4689d1b93db133da20d223588668ca92c40433aaf586a0d80d92e7037/avogadro-2.0.0-cp313-cp313-macosx_10_13_x86_64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,783   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/fb/5b/1c171410871a2d0b781151afe1ccba8204f6b4728bee00f5f3e8f999c726/avogadro-2.0.0-cp313-cp313-macosx_11_0_arm64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,783   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/14/6a/5d0eaeb6bcdd90123301ced0a108da58773f5580821d07c4ce421eaaaf02/avogadro-2.0.0-cp313-cp313-manylinux_2_26_aarch64.manylinux_2_28_aarch64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,784   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/d9/f1/364581ad5ad0e36b52b1123677741ce99f65ff24ceb6ad78789755fd4bca/avogadro-2.0.0-cp313-cp313-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,784   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/70/0c/ce60711ef429a0a5afffb4b508ac5a2f16b4a6aebc422b5ff4ded2240c1d/avogadro-2.0.0-cp313-cp313-musllinux_1_2_aarch64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,785   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/c8/55/31bf675a41686ebb3eb625d6bd1b62c28ad70b8d934c613855e766510d4e/avogadro-2.0.0-cp313-cp313-musllinux_1_2_x86_64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,786   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/76/ca/6254c244be19090664d43ec47f7f3cda90614614a3bb830fdea68afd0d28/avogadro-2.0.0-cp313-cp313-win_amd64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,786   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/86/e2/449b171c943ac6dbfad6d892e4e2855268bf9590a354082f8d0c6a337e03/avogadro-2.0.0-cp314-cp314-macosx_10_15_x86_64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,787   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/4d/93/5f08f8e5fdf6b5138b21020704919c3f8e46517d7cb79d34876ef28f1c11/avogadro-2.0.0-cp314-cp314-macosx_11_0_arm64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,787   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/53/12/add44d5dbca904e169f7a85d0814bec7c6b61b07d278fd81f2aa01eee731/avogadro-2.0.0-cp314-cp314-manylinux_2_26_aarch64.manylinux_2_28_aarch64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,788   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/96/86/27de77975dd6b88b3ce0c06f923f625855ed8336f474da0298a2c245fa26/avogadro-2.0.0-cp314-cp314-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,789   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/77/bf/fdbba71237d83929379b0f68341f38f09f7cbb4e963b1e87d72aa5e7b962/avogadro-2.0.0-cp314-cp314-musllinux_1_2_aarch64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,789   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/7c/e1/f7d399539b08e20ae938e7e8d16005ee9a6237bcbc98ef4e48e5913c9ed5/avogadro-2.0.0-cp314-cp314-musllinux_1_2_x86_64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,790   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/13/a0/a48a3dc721ea3953502d170449e3c35f796f29ed3123e1faf597b116d3aa/avogadro-2.0.0-cp314-cp314-win_amd64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,790   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/97/f6/1694f187f4cf1ec6dce2393fe26e1eec20d4ae0e2ca8e624d86f8f514a2b/avogadro-2.0.0-cp314-cp314t-macosx_10_15_x86_64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,791   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/e1/64/ff270f3164c17fbe8bb11b49030e7c7b3bf4c6e9ff86a9f08be4d88f226c/avogadro-2.0.0-cp314-cp314t-macosx_11_0_arm64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,791   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/ec/fc/c6806e0b33fff12123083915e4eaf00e245f926d0cd8710f86a1b4758938/avogadro-2.0.0-cp314-cp314t-manylinux_2_26_aarch64.manylinux_2_28_aarch64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,792   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/f4/7a/0f5197431eb7f07d93c2d8d67de0bbe6a5ad745209f48e47a42c94c93df1/avogadro-2.0.0-cp314-cp314t-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,792   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/88/d2/5bbbdd145d73d62be56cd0e6ef9e314595ab811f8f806c0734b0f50262f2/avogadro-2.0.0-cp314-cp314t-musllinux_1_2_aarch64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,793   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/7b/a7/5ab95919d1dd9101c50452494de17e16ec568d6e15728b2bdc6c7df303d8/avogadro-2.0.0-cp314-cp314t-musllinux_1_2_x86_64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,794   Skipping link: No binaries permitted for avogadro: https://files.pythonhosted.org/packages/9a/8f/c2ba53a0e82747209923119d33714b640e0929c7bd4b154feb18d51d4cea/avogadro-2.0.0-cp314-cp314t-win_amd64.whl (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11)
2026-04-01T12:21:10,795   Found link https://files.pythonhosted.org/packages/05/d6/90e1cf760ebe44518e1a01eb90c539398022445a57031be4b3d865b60d41/avogadro-2.0.0.tar.gz (from https://pypi.org/simple/avogadro/) (requires-python:>=3.11), version: 2.0.0
2026-04-01T12:21:10,796 Fetching project page and analyzing links: https://www.piwheels.org/simple/avogadro/
2026-04-01T12:21:10,797 Getting page https://www.piwheels.org/simple/avogadro/
2026-04-01T12:21:10,798 Found index url https://www.piwheels.org/simple
2026-04-01T12:21:10,974 Fetched page https://www.piwheels.org/simple/avogadro/ as text/html
2026-04-01T12:21:10,978   Skipping link: No binaries permitted for avogadro: https://archive1.piwheels.org/simple/avogadro/avogadro-1.103.0-cp311-cp311-linux_armv6l.whl#sha256=724b87880d1254ea255ffd3c3f0cbc686f81ccb0e0739aa6e1987ea1b8d0e8cc (from https://www.piwheels.org/simple/avogadro/)
2026-04-01T12:21:10,979   Skipping link: No binaries permitted for avogadro: https://archive1.piwheels.org/simple/avogadro/avogadro-1.103.0-cp311-cp311-linux_armv7l.whl#sha256=724b87880d1254ea255ffd3c3f0cbc686f81ccb0e0739aa6e1987ea1b8d0e8cc (from https://www.piwheels.org/simple/avogadro/)
2026-04-01T12:21:10,979   Skipping link: No binaries permitted for avogadro: https://archive1.piwheels.org/simple/avogadro/avogadro-1.103.0-cp313-cp313-linux_armv6l.whl#sha256=03d88113dd693468dea75d44d80b42f0a4075ca1fbbb7fdc783c004e4175fd1f (from https://www.piwheels.org/simple/avogadro/)
2026-04-01T12:21:10,980   Skipping link: No binaries permitted for avogadro: https://archive1.piwheels.org/simple/avogadro/avogadro-1.103.0-cp313-cp313-linux_armv7l.whl#sha256=03d88113dd693468dea75d44d80b42f0a4075ca1fbbb7fdc783c004e4175fd1f (from https://www.piwheels.org/simple/avogadro/)
2026-04-01T12:21:10,980   Skipping link: No binaries permitted for avogadro: https://archive1.piwheels.org/simple/avogadro/avogadro-1.102.1-cp313-cp313-linux_armv6l.whl#sha256=2bb1d5ebe619b436a3772c8d089a9099f7fd3dfca29f4c6f9542dc29916bcedb (from https://www.piwheels.org/simple/avogadro/)
2026-04-01T12:21:10,981   Skipping link: No binaries permitted for avogadro: https://archive1.piwheels.org/simple/avogadro/avogadro-1.102.1-cp313-cp313-linux_armv7l.whl#sha256=2bb1d5ebe619b436a3772c8d089a9099f7fd3dfca29f4c6f9542dc29916bcedb (from https://www.piwheels.org/simple/avogadro/)
2026-04-01T12:21:10,981   Skipping link: No binaries permitted for avogadro: https://archive1.piwheels.org/simple/avogadro/avogadro-1.102.0-cp311-cp311-linux_armv6l.whl#sha256=d21176cdb79c1d63c7756b3cf473909365a88175fdfe6bf8aaf6c945ceadce69 (from https://www.piwheels.org/simple/avogadro/)
2026-04-01T12:21:10,982   Skipping link: No binaries permitted for avogadro: https://archive1.piwheels.org/simple/avogadro/avogadro-1.102.0-cp311-cp311-linux_armv7l.whl#sha256=d21176cdb79c1d63c7756b3cf473909365a88175fdfe6bf8aaf6c945ceadce69 (from https://www.piwheels.org/simple/avogadro/)
2026-04-01T12:21:10,982   Skipping link: No binaries permitted for avogadro: https://archive1.piwheels.org/simple/avogadro/avogadro-1.102.0-cp313-cp313-linux_armv6l.whl#sha256=d7c7699136a74edaecd9a5dca43b58dc90abe8d0b1bb4e028cf474c8bb71762e (from https://www.piwheels.org/simple/avogadro/)
2026-04-01T12:21:10,983   Skipping link: No binaries permitted for avogadro: https://archive1.piwheels.org/simple/avogadro/avogadro-1.102.0-cp313-cp313-linux_armv7l.whl#sha256=d7c7699136a74edaecd9a5dca43b58dc90abe8d0b1bb4e028cf474c8bb71762e (from https://www.piwheels.org/simple/avogadro/)
2026-04-01T12:21:10,984 Skipping link: not a file: https://www.piwheels.org/simple/avogadro/
2026-04-01T12:21:10,984 Skipping link: not a file: https://pypi.org/simple/avogadro/
2026-04-01T12:21:11,003 Given no hashes to check 1 links for project 'avogadro': discarding no candidates
2026-04-01T12:21:11,021 Collecting avogadro==2.0.0
2026-04-01T12:21:11,023   Created temporary directory: /tmp/pip-unpack-w532g1dm
2026-04-01T12:21:11,175   Downloading avogadro-2.0.0.tar.gz (5.1 MB)
2026-04-01T12:21:14,732   Added avogadro==2.0.0 from https://files.pythonhosted.org/packages/05/d6/90e1cf760ebe44518e1a01eb90c539398022445a57031be4b3d865b60d41/avogadro-2.0.0.tar.gz to build tracker '/tmp/pip-build-tracker-tj3ju6ni'
2026-04-01T12:21:14,740   Created temporary directory: /tmp/pip-build-env-2lamrwly
2026-04-01T12:21:14,744   Installing build dependencies: started
2026-04-01T12:21:14,745   Running command pip subprocess to install build dependencies
2026-04-01T12:21:15,903   Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11)
2026-04-01T12:21:16,342   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-04-01T12:21:16,365   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-04-01T12:21:16,922   Collecting scikit-build-core>=0.10
2026-04-01T12:21:16,948     Using cached https://www.piwheels.org/simple/scikit-build-core/scikit_build_core-0.12.2-py3-none-any.whl (192 kB)
2026-04-01T12:21:17,166   Collecting pybind11
2026-04-01T12:21:17,203     Using cached https://www.piwheels.org/simple/pybind11/pybind11-3.0.3-py3-none-any.whl (313 kB)
2026-04-01T12:21:17,557   Collecting setuptools_scm>=8
2026-04-01T12:21:17,573     Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl (21 kB)
2026-04-01T12:21:17,780   Collecting packaging>=23.2
2026-04-01T12:21:17,796     Using cached https://www.piwheels.org/simple/packaging/packaging-26.0-py3-none-any.whl (74 kB)
2026-04-01T12:21:17,913   Collecting pathspec>=0.12.0
2026-04-01T12:21:17,930     Using cached https://www.piwheels.org/simple/pathspec/pathspec-1.0.4-py3-none-any.whl (55 kB)
2026-04-01T12:21:18,019   Collecting vcs-versioning>=1.0.0.dev0
2026-04-01T12:21:18,036     Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl (79 kB)
2026-04-01T12:21:19,506   Collecting setuptools
2026-04-01T12:21:19,589     Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB)
2026-04-01T12:21:22,687   Installing collected packages: setuptools, pybind11, pathspec, packaging, vcs-versioning, scikit-build-core, setuptools_scm
2026-04-01T12:21:25,981     Creating /tmp/pip-build-env-2lamrwly/overlay/local/bin
2026-04-01T12:21:25,983     changing mode of /tmp/pip-build-env-2lamrwly/overlay/local/bin/pybind11-config to 755
2026-04-01T12:21:26,690     changing mode of /tmp/pip-build-env-2lamrwly/overlay/local/bin/vcs-versioning to 755
2026-04-01T12:21:27,416     changing mode of /tmp/pip-build-env-2lamrwly/overlay/local/bin/setuptools-scm to 755
2026-04-01T12:21:27,478   Successfully installed packaging-26.0 pathspec-1.0.4 pybind11-3.0.3 scikit-build-core-0.12.2 setuptools-82.0.1 setuptools_scm-10.0.5 vcs-versioning-1.1.1
2026-04-01T12:21:27,776   Installing build dependencies: finished with status 'done'
2026-04-01T12:21:27,783   Getting requirements to build wheel: started
2026-04-01T12:21:27,784   Running command Getting requirements to build wheel
2026-04-01T12:21:28,396   Getting requirements to build wheel: finished with status 'done'
2026-04-01T12:21:28,413   Created temporary directory: /tmp/pip-modern-metadata-qqo4yrm1
2026-04-01T12:21:28,416   Preparing metadata (pyproject.toml): started
2026-04-01T12:21:28,417   Running command Preparing metadata (pyproject.toml)
2026-04-01T12:21:29,241   *** scikit-build-core 0.12.2 using CMake 3.25.1 (metadata_wheel)
2026-04-01T12:21:29,352   Preparing metadata (pyproject.toml): finished with status 'done'
2026-04-01T12:21:29,357   Source in /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d has version 2.0.0, which satisfies requirement avogadro==2.0.0 from https://files.pythonhosted.org/packages/05/d6/90e1cf760ebe44518e1a01eb90c539398022445a57031be4b3d865b60d41/avogadro-2.0.0.tar.gz
2026-04-01T12:21:29,358   Removed avogadro==2.0.0 from https://files.pythonhosted.org/packages/05/d6/90e1cf760ebe44518e1a01eb90c539398022445a57031be4b3d865b60d41/avogadro-2.0.0.tar.gz from build tracker '/tmp/pip-build-tracker-tj3ju6ni'
2026-04-01T12:21:29,364 Created temporary directory: /tmp/pip-unpack-xp24vtgf
2026-04-01T12:21:29,365 Building wheels for collected packages: avogadro
2026-04-01T12:21:29,370   Created temporary directory: /tmp/pip-wheel-ca06o9me
2026-04-01T12:21:29,370   Destination directory: /tmp/pip-wheel-ca06o9me
2026-04-01T12:21:29,372   Building wheel for avogadro (pyproject.toml): started
2026-04-01T12:21:29,374   Running command Building wheel for avogadro (pyproject.toml)
2026-04-01T12:21:30,168   *** scikit-build-core 0.12.2 using CMake 3.25.1 (wheel)
2026-04-01T12:21:30,195   *** Configuring CMake...
2026-04-01T12:21:30,299   loading initial cache file /tmp/tmpxp_nina1/build/CMakeInit.txt
2026-04-01T12:21:30,575   -- The C compiler identification is GNU 12.2.0
2026-04-01T12:21:30,912   -- The CXX compiler identification is GNU 12.2.0
2026-04-01T12:21:30,965   -- Detecting C compiler ABI info
2026-04-01T12:21:31,228   -- Detecting C compiler ABI info - done
2026-04-01T12:21:31,266   -- Check for working C compiler: /usr/bin/arm-linux-gnueabihf-gcc - skipped
2026-04-01T12:21:31,268   -- Detecting C compile features
2026-04-01T12:21:31,270   -- Detecting C compile features - done
2026-04-01T12:21:31,289   -- Detecting CXX compiler ABI info
2026-04-01T12:21:31,642   -- Detecting CXX compiler ABI info - done
2026-04-01T12:21:31,681   -- Check for working CXX compiler: /usr/bin/arm-linux-gnueabihf-g++ - skipped
2026-04-01T12:21:31,683   -- Detecting CXX compile features
2026-04-01T12:21:31,685   -- Detecting CXX compile features - done
2026-04-01T12:21:31,703   -- Performing Test HAVE_GCC_ERROR_RETURN_TYPE
2026-04-01T12:21:32,020   -- Performing Test HAVE_GCC_ERROR_RETURN_TYPE - Success
2026-04-01T12:21:32,049   -- Found Git: /usr/bin/git (found version "2.39.5")
2026-04-01T12:21:32,059   -- Could not use git to determine source version, using version 2.0.0
2026-04-01T12:21:32,137   -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY
2026-04-01T12:21:32,525   -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success
2026-04-01T12:21:32,530   -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY
2026-04-01T12:21:32,863   -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success
2026-04-01T12:21:32,865   -- Performing Test COMPILER_HAS_DEPRECATED_ATTR
2026-04-01T12:21:33,225   -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success
2026-04-01T12:21:36,334   -- Found Python: /usr/bin/python3 (found version "3.11.2") found components: Interpreter Development Development.Module Development.Embed
2026-04-01T12:21:36,499   -- Performing Test HAS_FLTO_AUTO
2026-04-01T12:21:37,294   -- Performing Test HAS_FLTO_AUTO - Success
2026-04-01T12:21:37,297   -- Found pybind11: /tmp/pip-build-env-2lamrwly/overlay/local/lib/python3.11/dist-packages/pybind11/include (found version "3.0.3")
2026-04-01T12:21:37,314   -- Configuring done
2026-04-01T12:21:37,520   -- Generating done
2026-04-01T12:21:37,631   -- Build files have been written to: /tmp/tmpxp_nina1/build
2026-04-01T12:21:37,721   *** Building project with Ninja...
2026-04-01T12:21:38,023   [1/88] /usr/bin/arm-linux-gnueabihf-gcc  -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/struct -O3 -DNDEBUG -fPIC -MD -MT thirdparty/CMakeFiles/struct.dir/struct/struct_endian.c.o -MF thirdparty/CMakeFiles/struct.dir/struct/struct_endian.c.o.d -o thirdparty/CMakeFiles/struct.dir/struct/struct_endian.c.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/struct/struct_endian.c
2026-04-01T12:21:39,612   [2/88] /usr/bin/arm-linux-gnueabihf-gcc  -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/struct -O3 -DNDEBUG -fPIC -MD -MT thirdparty/CMakeFiles/struct.dir/struct/struct.c.o -MF thirdparty/CMakeFiles/struct.dir/struct/struct.c.o.d -o thirdparty/CMakeFiles/struct.dir/struct/struct.c.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/struct/struct.c
2026-04-01T12:21:40,176   [3/88] : && /usr/bin/cmake -E rm -f thirdparty/libstruct.a && /usr/bin/arm-linux-gnueabihf-ar qc thirdparty/libstruct.a  thirdparty/CMakeFiles/struct.dir/struct/struct.c.o thirdparty/CMakeFiles/struct.dir/struct/struct_endian.c.o && /usr/bin/arm-linux-gnueabihf-ranlib thirdparty/libstruct.a && :
2026-04-01T12:21:41,184   [4/88] /usr/bin/arm-linux-gnueabihf-g++   -O2 -DNDEBUG -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT utilities/encodefile/CMakeFiles/encodefile.dir/encodefile.cxx.o -MF utilities/encodefile/CMakeFiles/encodefile.dir/encodefile.cxx.o.d -o utilities/encodefile/CMakeFiles/encodefile.dir/encodefile.cxx.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/utilities/encodefile/encodefile.cxx
2026-04-01T12:21:41,857   [5/88] : && /usr/bin/arm-linux-gnueabihf-g++ -O2 -DNDEBUG -Wl,--fatal-warnings -Wl,--no-undefined -lc utilities/encodefile/CMakeFiles/encodefile.dir/encodefile.cxx.o -o bin/encodefile   && :
2026-04-01T12:21:44,952   [6/88] /usr/bin/arm-linux-gnueabihf-g++  -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -isystem /usr/include/eigen3 -O2 -DNDEBUG -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT utilities/resdata/CMakeFiles/resdataparse.dir/resdataparse.cxx.o -MF utilities/resdata/CMakeFiles/resdataparse.dir/resdataparse.cxx.o.d -o utilities/resdata/CMakeFiles/resdataparse.dir/resdataparse.cxx.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/utilities/resdata/resdataparse.cxx
2026-04-01T12:21:45,037   [7/88] /usr/bin/arm-linux-gnueabihf-g++  -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/pugixml -isystem /usr/include/eigen3 -O2 -DNDEBUG -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT utilities/bodr/CMakeFiles/bodrparse.dir/bodrparse.cxx.o -MF utilities/bodr/CMakeFiles/bodrparse.dir/bodrparse.cxx.o.d -o utilities/bodr/CMakeFiles/bodrparse.dir/bodrparse.cxx.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/utilities/bodr/bodrparse.cxx
2026-04-01T12:21:45,038   In file included from /usr/include/c++/12/vector:70,
2026-04-01T12:21:45,039                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/utilities.h:13,
2026-04-01T12:21:45,041                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/utilities/bodr/bodrparse.cxx:19:
2026-04-01T12:21:45,042   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >}; _Tp = Element; _Alloc = std::allocator<Element>]’:
2026-04-01T12:21:45,043   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<Element>::iterator’ changed in GCC 7.1
2026-04-01T12:21:45,044     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:21:45,045         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:21:45,046   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >}; _Tp = Element; _Alloc = std::allocator<Element>]’,
2026-04-01T12:21:45,058       inlined from ‘int main(int, char**)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/utilities/bodr/bodrparse.cxx:110:30:
2026-04-01T12:21:45,060   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Element*, std::vector<Element> >’ changed in GCC 7.1
2026-04-01T12:21:45,061     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:21:45,062         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:21:45,837   [8/88] : && /usr/bin/arm-linux-gnueabihf-g++ -O2 -DNDEBUG -Wl,--fatal-warnings -Wl,--no-undefined -lc utilities/resdata/CMakeFiles/resdataparse.dir/resdataparse.cxx.o -o bin/resdataparse   && :
2026-04-01T12:21:54,223   [9/88] /usr/bin/arm-linux-gnueabihf-g++ -DCore_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/core/CMakeFiles/Core.dir/angleiterator.cpp.o -MF avogadro/core/CMakeFiles/Core.dir/angleiterator.cpp.o.d -o avogadro/core/CMakeFiles/Core.dir/angleiterator.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/angleiterator.cpp
2026-04-01T12:22:01,141   [10/88] /usr/bin/arm-linux-gnueabihf-g++ -DCore_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/core/CMakeFiles/Core.dir/atomutilities.cpp.o -MF avogadro/core/CMakeFiles/Core.dir/atomutilities.cpp.o.d -o avogadro/core/CMakeFiles/Core.dir/atomutilities.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/atomutilities.cpp
2026-04-01T12:22:01,766   [11/88] /usr/bin/arm-linux-gnueabihf-g++ -DCore_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/core/CMakeFiles/Core.dir/cube.cpp.o -MF avogadro/core/CMakeFiles/Core.dir/cube.cpp.o.d -o avogadro/core/CMakeFiles/Core.dir/cube.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/cube.cpp
2026-04-01T12:22:02,958   [12/88] /usr/bin/arm-linux-gnueabihf-g++ -DCore_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/core/CMakeFiles/Core.dir/coordinateblockgenerator.cpp.o -MF avogadro/core/CMakeFiles/Core.dir/coordinateblockgenerator.cpp.o.d -o avogadro/core/CMakeFiles/Core.dir/coordinateblockgenerator.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/coordinateblockgenerator.cpp
2026-04-01T12:22:07,272   [13/88] /usr/bin/arm-linux-gnueabihf-g++ -DCore_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/core/CMakeFiles/Core.dir/elements.cpp.o -MF avogadro/core/CMakeFiles/Core.dir/elements.cpp.o.d -o avogadro/core/CMakeFiles/Core.dir/elements.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/elements.cpp
2026-04-01T12:22:16,311   [14/88] /usr/bin/arm-linux-gnueabihf-g++ -DCore_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/core/CMakeFiles/Core.dir/dihedraliterator.cpp.o -MF avogadro/core/CMakeFiles/Core.dir/dihedraliterator.cpp.o.d -o avogadro/core/CMakeFiles/Core.dir/dihedraliterator.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/dihedraliterator.cpp
2026-04-01T12:22:16,655   [15/88] /usr/bin/arm-linux-gnueabihf-g++ -DCore_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/core/CMakeFiles/Core.dir/crystaltools.cpp.o -MF avogadro/core/CMakeFiles/Core.dir/crystaltools.cpp.o.d -o avogadro/core/CMakeFiles/Core.dir/crystaltools.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/crystaltools.cpp
2026-04-01T12:22:16,656   In file included from /usr/include/c++/12/vector:70,
2026-04-01T12:22:16,657                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:12,
2026-04-01T12:22:16,657                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/crystaltools.h:11,
2026-04-01T12:22:16,659                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/crystaltools.cpp:6:
2026-04-01T12:22:16,660   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:22:16,661   /usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:22:16,662     523 |     vector<_Tp, _Alloc>::
2026-04-01T12:22:16,662         |     ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:16,663   In file included from /usr/include/c++/12/vector:64:
2026-04-01T12:22:16,664   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:22:16,665       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:22:16,666       inlined from ‘static bool Avogadro::Core::CrystalTools::setFractionalCoordinates(Avogadro::Core::Molecule&, const Avogadro::Core::Array<Eigen::Matrix<double, 3, 1> >&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/crystaltools.cpp:739:16,
2026-04-01T12:22:16,667       inlined from ‘static bool Avogadro::Core::CrystalTools::setFractionalCoordinates(Avogadro::Core::Molecule&, const Avogadro::Core::Array<Eigen::Matrix<double, 3, 1> >&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/crystaltools.cpp:729:6:
2026-04-01T12:22:16,668   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:22:16,669    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:22:16,670         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:16,671   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:22:16,672       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:22:16,673       inlined from ‘static bool Avogadro::Core::CrystalTools::fractionalCoordinates(const Avogadro::Core::Molecule&, Avogadro::Core::Array<Eigen::Matrix<double, 3, 1> >&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/crystaltools.cpp:710:16,
2026-04-01T12:22:16,674       inlined from ‘static bool Avogadro::Core::CrystalTools::fractionalCoordinates(const Avogadro::Core::Molecule&, Avogadro::Core::Array<Eigen::Matrix<double, 3, 1> >&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/crystaltools.cpp:703:6:
2026-04-01T12:22:16,675   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:22:16,688    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:22:16,689         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:16,690   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:22:16,691       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:22:16,691       inlined from ‘bool Avogadro::Core::Molecule::setAtomPosition3d(Avogadro::Index, const Avogadro::Vector3&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:1207:27,
2026-04-01T12:22:16,692       inlined from ‘void Avogadro::Core::AtomTemplate<Molecule_T>::setPosition3d(const Avogadro::Vector3&) [with Molecule_T = Avogadro::Core::Molecule]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/atom.h:317:32,
2026-04-01T12:22:16,693       inlined from ‘static bool Avogadro::Core::CrystalTools::buildSupercell(Avogadro::Core::Molecule&, unsigned int, unsigned int, unsigned int)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/crystaltools.cpp:614:34:
2026-04-01T12:22:16,694   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:22:16,695    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:22:16,696         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:19,024   [16/88] /usr/bin/arm-linux-gnueabihf-g++ -DCore_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/core/CMakeFiles/Core.dir/graph.cpp.o -MF avogadro/core/CMakeFiles/Core.dir/graph.cpp.o.d -o avogadro/core/CMakeFiles/Core.dir/graph.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/graph.cpp
2026-04-01T12:22:19,683   [17/88] /usr/bin/arm-linux-gnueabihf-g++ -DCore_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/core/CMakeFiles/Core.dir/layer.cpp.o -MF avogadro/core/CMakeFiles/Core.dir/layer.cpp.o.d -o avogadro/core/CMakeFiles/Core.dir/layer.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/layer.cpp
2026-04-01T12:22:22,127   [18/88] /usr/bin/arm-linux-gnueabihf-g++  -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/pugixml -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT thirdparty/CMakeFiles/pugixml.dir/pugixml/pugixml.cpp.o -MF thirdparty/CMakeFiles/pugixml.dir/pugixml/pugixml.cpp.o.d -o thirdparty/CMakeFiles/pugixml.dir/pugixml/pugixml.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/pugixml/pugixml.cpp
2026-04-01T12:22:22,700   [19/88] : && /usr/bin/cmake -E rm -f thirdparty/libpugixml.a && /usr/bin/arm-linux-gnueabihf-ar qc thirdparty/libpugixml.a  thirdparty/CMakeFiles/pugixml.dir/pugixml/pugixml.cpp.o && /usr/bin/arm-linux-gnueabihf-ranlib thirdparty/libpugixml.a && :
2026-04-01T12:22:23,426   [20/88] : && /usr/bin/arm-linux-gnueabihf-g++ -O2 -DNDEBUG -Wl,--fatal-warnings -Wl,--no-undefined -lc utilities/bodr/CMakeFiles/bodrparse.dir/bodrparse.cxx.o -o bin/bodrparse  thirdparty/libpugixml.a && :
2026-04-01T12:22:25,089   [21/88] /usr/bin/arm-linux-gnueabihf-g++ -DCore_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/core/CMakeFiles/Core.dir/gaussianset.cpp.o -MF avogadro/core/CMakeFiles/Core.dir/gaussianset.cpp.o.d -o avogadro/core/CMakeFiles/Core.dir/gaussianset.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp
2026-04-01T12:22:25,091   In file included from /usr/include/c++/12/vector:70,
2026-04-01T12:22:25,092                    from /usr/include/c++/12/functional:62,
2026-04-01T12:22:25,095                    from /usr/include/eigen3/Eigen/Core:85,
2026-04-01T12:22:25,096                    from /usr/include/eigen3/Eigen/Dense:1,
2026-04-01T12:22:25,097                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/matrix.h:10,
2026-04-01T12:22:25,098                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/variant.h:12,
2026-04-01T12:22:25,099                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/basisset.h:10,
2026-04-01T12:22:25,100                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.h:11,
2026-04-01T12:22:25,101                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:6:
2026-04-01T12:22:25,102   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]’:
2026-04-01T12:22:25,103   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2026-04-01T12:22:25,104     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:22:25,106         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,107   In file included from /usr/include/c++/12/vector:64:
2026-04-01T12:22:25,108   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,109       inlined from ‘unsigned int Avogadro::Core::GaussianSet::addGto(unsigned int, double, double)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:86:19:
2026-04-01T12:22:25,110   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,111    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:22:25,114         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:22:25,115   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,116       inlined from ‘unsigned int Avogadro::Core::GaussianSet::addGto(unsigned int, double, double)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:87:19:
2026-04-01T12:22:25,117   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,118    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:22:25,118         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:22:25,119   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’:
2026-04-01T12:22:25,120   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2026-04-01T12:22:25,121     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:22:25,122         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,123   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,124       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,125       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:318:28:
2026-04-01T12:22:25,128   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,129     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,131         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,133   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,134       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,135       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:328:28:
2026-04-01T12:22:25,136   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,139     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,140         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,142   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,143       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:329:28:
2026-04-01T12:22:25,146   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,147    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:22:25,149         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:22:25,150   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,151       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:330:28:
2026-04-01T12:22:25,152   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,153    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:22:25,154         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:22:25,155   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,157       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,158       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:343:28:
2026-04-01T12:22:25,161   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,163     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,164         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,165   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,166       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:344:28:
2026-04-01T12:22:25,167   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,168    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:22:25,169         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:22:25,171   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,172       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:345:28:
2026-04-01T12:22:25,173   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,174    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:22:25,177         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:22:25,181   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,182       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,186       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:347:28:
2026-04-01T12:22:25,187   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,188     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,198         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,199   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,206       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:348:28:
2026-04-01T12:22:25,207   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,208    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:22:25,209         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:22:25,210   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,211       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:349:28:
2026-04-01T12:22:25,212   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,213    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:22:25,214         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:22:25,215   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,216       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,217       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:360:28:
2026-04-01T12:22:25,218   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,228     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,238         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,239   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,240       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,241       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:363:28:
2026-04-01T12:22:25,242   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,243     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,245         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,245   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,246       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:366:28:
2026-04-01T12:22:25,247   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,248    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:22:25,249         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:22:25,250   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,250       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,251       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:368:28:
2026-04-01T12:22:25,252   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,253     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,254         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,255   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,257       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,258       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:371:28:
2026-04-01T12:22:25,259   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,262     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,264         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,265   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,266       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,268       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:406:30:
2026-04-01T12:22:25,269   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,270     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,271         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,278   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,279       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,280       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:407:30:
2026-04-01T12:22:25,281   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,282     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,283         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,284   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,285       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,286       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:408:30:
2026-04-01T12:22:25,287   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,288     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,289         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,289   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,290       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,291       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:409:30:
2026-04-01T12:22:25,292   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,293     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,294         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,295   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,296       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,297       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:410:30:
2026-04-01T12:22:25,298   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,299     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,300         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,301   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,302       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,303       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:411:30:
2026-04-01T12:22:25,304   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,305     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,306         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,307   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,307       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,308       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:412:30:
2026-04-01T12:22:25,309   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,310     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,312         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,313   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,314       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,315       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:413:30:
2026-04-01T12:22:25,316   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,317     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,318         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,319   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,320       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,321       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:414:30:
2026-04-01T12:22:25,322   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,324     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,326         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,327   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,329       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,330       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:415:30:
2026-04-01T12:22:25,330   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,331     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,332         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,333   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,334       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,337       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:428:28:
2026-04-01T12:22:25,338   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,339     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,340         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,340   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,342       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,343       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:429:28:
2026-04-01T12:22:25,344   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,345     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,354         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,355   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,356       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,357       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:430:28:
2026-04-01T12:22:25,358   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,359     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,360         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,360   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,361       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,362       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:431:28:
2026-04-01T12:22:25,363   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,364     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,365         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,365   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,366       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,367       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:432:28:
2026-04-01T12:22:25,368   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,369     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,370         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,371   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,372       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,373       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:433:28:
2026-04-01T12:22:25,374   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,375     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,375         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,376   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,377       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,378       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:434:28:
2026-04-01T12:22:25,379   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,380     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,381         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,382   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,383       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,383       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:450:28:
2026-04-01T12:22:25,384   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,385     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,386         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,387   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,388       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,389       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:451:28:
2026-04-01T12:22:25,390   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,390     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,392         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,393   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,393       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,394       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:452:28:
2026-04-01T12:22:25,395   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,396     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,397         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,398   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,399       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,401       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:453:28:
2026-04-01T12:22:25,402   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,403     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,404         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,405   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,406       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,407       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:454:28:
2026-04-01T12:22:25,408   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,409     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,410         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,411   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,412       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,413       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:455:28:
2026-04-01T12:22:25,414   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,415     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,416         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,417   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,419       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,420       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:456:28:
2026-04-01T12:22:25,421   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,423     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,424         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,425   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,426       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,428       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:457:28:
2026-04-01T12:22:25,429   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,430     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,431         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,435   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,436       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,437       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:458:28:
2026-04-01T12:22:25,438   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,439     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,440         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,441   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,441       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,442       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:459:28:
2026-04-01T12:22:25,443   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,444     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,445         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,446   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,447       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,448       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:460:28:
2026-04-01T12:22:25,449   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,450     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,452         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,452   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,453       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,454       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:461:28:
2026-04-01T12:22:25,455   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,456     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,457         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,459   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,460       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,461       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:462:28:
2026-04-01T12:22:25,462   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,463     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,464         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,465   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,466       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,467       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:463:28:
2026-04-01T12:22:25,468   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,471     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,472         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,473   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,474       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,475       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:464:28:
2026-04-01T12:22:25,476   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,477     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,478         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,479   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,480       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,481       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:474:28:
2026-04-01T12:22:25,483   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,484     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,486         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,487   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,488       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,489       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:475:28:
2026-04-01T12:22:25,490   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,491     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,492         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,493   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,494       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,495       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:476:28:
2026-04-01T12:22:25,497   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,498     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,500         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,501   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,502       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,503       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:477:28:
2026-04-01T12:22:25,508   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,509     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,510         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,511   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,512       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,512       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:478:28:
2026-04-01T12:22:25,513   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,514     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,515         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,516   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,517       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,518       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:479:28:
2026-04-01T12:22:25,519   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,520     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,520         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,521   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,522       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,523       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:480:28:
2026-04-01T12:22:25,524   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,525     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,526         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,527   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,528       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,529       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:481:28:
2026-04-01T12:22:25,535   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,536     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,536         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:25,537   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:25,538       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:25,539       inlined from ‘void Avogadro::Core::GaussianSet::_ZN8Avogadro4Core11GaussianSet15initCalculationEv.part.0()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.cpp:482:28:
2026-04-01T12:22:25,540   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:25,541     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:25,542         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:26,575   [22/88] /usr/bin/arm-linux-gnueabihf-g++ -DCore_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/core/CMakeFiles/Core.dir/gaussiansettools.cpp.o -MF avogadro/core/CMakeFiles/Core.dir/gaussiansettools.cpp.o.d -o avogadro/core/CMakeFiles/Core.dir/gaussiansettools.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussiansettools.cpp
2026-04-01T12:22:26,575   In file included from /usr/include/c++/12/vector:70,
2026-04-01T12:22:26,577                    from /usr/include/c++/12/functional:62,
2026-04-01T12:22:26,578                    from /usr/include/eigen3/Eigen/Core:85,
2026-04-01T12:22:26,579                    from /usr/include/eigen3/Eigen/Dense:1,
2026-04-01T12:22:26,580                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/matrix.h:10,
2026-04-01T12:22:26,581                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/variant.h:12,
2026-04-01T12:22:26,582                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/basisset.h:10,
2026-04-01T12:22:26,583                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussiansettools.h:11,
2026-04-01T12:22:26,584                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussiansettools.cpp:6:
2026-04-01T12:22:26,585   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’:
2026-04-01T12:22:26,586   /usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2026-04-01T12:22:26,587     523 |     vector<_Tp, _Alloc>::
2026-04-01T12:22:26,588         |     ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:26,589   In file included from /usr/include/c++/12/vector:64:
2026-04-01T12:22:26,590   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:26,591       inlined from ‘Avogadro::Core::GaussianSetTools::GaussianSetTools(Avogadro::Core::Molecule*)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussiansettools.cpp:22:29:
2026-04-01T12:22:26,592   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:26,593    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:22:26,594         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:27,100   [23/88] /usr/bin/arm-linux-gnueabihf-g++ -DCore_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/core/CMakeFiles/Core.dir/layermanager.cpp.o -MF avogadro/core/CMakeFiles/Core.dir/layermanager.cpp.o.d -o avogadro/core/CMakeFiles/Core.dir/layermanager.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/layermanager.cpp
2026-04-01T12:22:27,743   [24/88] /usr/bin/arm-linux-gnueabihf-g++ -DCore_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/core/CMakeFiles/Core.dir/mutex.cpp.o -MF avogadro/core/CMakeFiles/Core.dir/mutex.cpp.o.d -o avogadro/core/CMakeFiles/Core.dir/mutex.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/mutex.cpp
2026-04-01T12:22:40,453   [25/88] /usr/bin/arm-linux-gnueabihf-g++ -DCore_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/core/CMakeFiles/Core.dir/neighborperceiver.cpp.o -MF avogadro/core/CMakeFiles/Core.dir/neighborperceiver.cpp.o.d -o avogadro/core/CMakeFiles/Core.dir/neighborperceiver.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/neighborperceiver.cpp
2026-04-01T12:22:40,617   [26/88] /usr/bin/arm-linux-gnueabihf-g++ -DCore_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/core/CMakeFiles/Core.dir/nameatomtyper.cpp.o -MF avogadro/core/CMakeFiles/Core.dir/nameatomtyper.cpp.o.d -o avogadro/core/CMakeFiles/Core.dir/nameatomtyper.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/nameatomtyper.cpp
2026-04-01T12:22:40,834   [27/88] /usr/bin/arm-linux-gnueabihf-g++ -DCore_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/core/CMakeFiles/Core.dir/internalcoordinates.cpp.o -MF avogadro/core/CMakeFiles/Core.dir/internalcoordinates.cpp.o.d -o avogadro/core/CMakeFiles/Core.dir/internalcoordinates.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/internalcoordinates.cpp
2026-04-01T12:22:42,687   [28/88] /usr/bin/arm-linux-gnueabihf-g++ -DCore_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/core/CMakeFiles/Core.dir/mesh.cpp.o -MF avogadro/core/CMakeFiles/Core.dir/mesh.cpp.o.d -o avogadro/core/CMakeFiles/Core.dir/mesh.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/mesh.cpp
2026-04-01T12:22:58,847   [29/88] /usr/bin/arm-linux-gnueabihf-g++ -DCore_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/core/CMakeFiles/Core.dir/slatersettools.cpp.o -MF avogadro/core/CMakeFiles/Core.dir/slatersettools.cpp.o.d -o avogadro/core/CMakeFiles/Core.dir/slatersettools.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/slatersettools.cpp
2026-04-01T12:22:58,848   In file included from /usr/include/c++/12/vector:70,
2026-04-01T12:22:58,850                    from /usr/include/c++/12/functional:62,
2026-04-01T12:22:58,852                    from /usr/include/eigen3/Eigen/Core:85,
2026-04-01T12:22:58,854                    from /usr/include/eigen3/Eigen/Dense:1,
2026-04-01T12:22:58,855                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/vector.h:10,
2026-04-01T12:22:58,857                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/slatersettools.h:11,
2026-04-01T12:22:58,859                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/slatersettools.cpp:6:
2026-04-01T12:22:58,861   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, 3, 1, 0, 3, 1>, const Eigen::Matrix<double, 3, 1, 0, 3, 1> >}; _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:22:58,863   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:22:58,864     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:22:58,866         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:58,878   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’:
2026-04-01T12:22:58,879   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2026-04-01T12:22:58,880   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {const Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, 3, 1, 0, 3, 1>, const Eigen::Matrix<double, 3, 1, 0, 3, 1> >}; _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:22:58,881       inlined from ‘std::vector<double> Avogadro::Core::SlaterSetTools::calculateValues(const Avogadro::Vector3&) const’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/slatersettools.cpp:98:24:
2026-04-01T12:22:58,883   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:22:58,884     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:58,885         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:22:58,886   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:22:58,887       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:22:58,888       inlined from ‘std::vector<double> Avogadro::Core::SlaterSetTools::calculateValues(const Avogadro::Vector3&) const’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/slatersettools.cpp:99:18:
2026-04-01T12:22:58,890   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:22:58,891     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:22:58,893         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:23:03,251   [30/88] /usr/bin/arm-linux-gnueabihf-g++ -DCore_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/core/CMakeFiles/Core.dir/ringperceiver.cpp.o -MF avogadro/core/CMakeFiles/Core.dir/ringperceiver.cpp.o.d -o avogadro/core/CMakeFiles/Core.dir/ringperceiver.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/ringperceiver.cpp
2026-04-01T12:23:06,352   [31/88] /usr/bin/arm-linux-gnueabihf-g++ -DCore_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/core/CMakeFiles/Core.dir/secondarystructure.cpp.o -MF avogadro/core/CMakeFiles/Core.dir/secondarystructure.cpp.o.d -o avogadro/core/CMakeFiles/Core.dir/secondarystructure.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/secondarystructure.cpp
2026-04-01T12:23:20,656   [32/88] /usr/bin/arm-linux-gnueabihf-g++ -DCore_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/core/CMakeFiles/Core.dir/symbolatomtyper.cpp.o -MF avogadro/core/CMakeFiles/Core.dir/symbolatomtyper.cpp.o.d -o avogadro/core/CMakeFiles/Core.dir/symbolatomtyper.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/symbolatomtyper.cpp
2026-04-01T12:23:21,697   [33/88] /usr/bin/arm-linux-gnueabihf-g++ -DCore_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/core/CMakeFiles/Core.dir/unitcell.cpp.o -MF avogadro/core/CMakeFiles/Core.dir/unitcell.cpp.o.d -o avogadro/core/CMakeFiles/Core.dir/unitcell.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/unitcell.cpp
2026-04-01T12:23:21,832   [34/88] /usr/bin/arm-linux-gnueabihf-g++ -DCore_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/core/CMakeFiles/Core.dir/version.cpp.o -MF avogadro/core/CMakeFiles/Core.dir/version.cpp.o.d -o avogadro/core/CMakeFiles/Core.dir/version.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/version.cpp
2026-04-01T12:23:30,540   [35/88] /usr/bin/arm-linux-gnueabihf-g++ -DCore_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/core/CMakeFiles/Core.dir/spacegroups.cpp.o -MF avogadro/core/CMakeFiles/Core.dir/spacegroups.cpp.o.d -o avogadro/core/CMakeFiles/Core.dir/spacegroups.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/spacegroups.cpp
2026-04-01T12:23:30,541   In file included from /usr/include/c++/12/vector:70,
2026-04-01T12:23:30,542                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:12,
2026-04-01T12:23:30,544                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/spacegroups.h:11,
2026-04-01T12:23:30,545                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/spacegroups.cpp:6:
2026-04-01T12:23:30,547   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:23:30,548   /usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:23:30,550     523 |     vector<_Tp, _Alloc>::
2026-04-01T12:23:30,551         |     ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:23:30,552   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const Eigen::Matrix<double, 3, 1, 0, 3, 1>&}; _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:23:30,553   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:23:30,554     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:23:30,556         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:23:30,557   In file included from /usr/include/c++/12/vector:64:
2026-04-01T12:23:30,558   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:23:30,560       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22,
2026-04-01T12:23:30,561       inlined from ‘static Avogadro::Core::Array<Eigen::Matrix<double, 3, 1> > Avogadro::Core::SpaceGroups::getTransforms(short unsigned int, const Avogadro::Vector3&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/spacegroups.cpp:252:18:
2026-04-01T12:23:30,562   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:23:30,563    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:23:30,564         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:23:30,565   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:23:30,566       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22,
2026-04-01T12:23:30,567       inlined from ‘static void Avogadro::Core::SpaceGroups::fillTranslationalCopies(Avogadro::Core::Molecule&, double)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/spacegroups.cpp:381:27:
2026-04-01T12:23:30,568   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:23:30,570    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:23:30,571         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:23:30,572   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:23:30,574       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22,
2026-04-01T12:23:30,576       inlined from ‘static void Avogadro::Core::SpaceGroups::fillTranslationalCopies(Avogadro::Core::Molecule&, double)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/spacegroups.cpp:385:27:
2026-04-01T12:23:30,577   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:23:30,578    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:23:30,588         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:23:30,590   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:23:30,591       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22,
2026-04-01T12:23:30,594       inlined from ‘static void Avogadro::Core::SpaceGroups::fillTranslationalCopies(Avogadro::Core::Molecule&, double)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/spacegroups.cpp:391:29:
2026-04-01T12:23:30,595   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:23:30,596    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:23:30,598         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:23:30,599   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:23:30,602       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22,
2026-04-01T12:23:30,603       inlined from ‘static void Avogadro::Core::SpaceGroups::fillTranslationalCopies(Avogadro::Core::Molecule&, double)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/spacegroups.cpp:396:29:
2026-04-01T12:23:30,604   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:23:30,605    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:23:30,607         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:23:30,608   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:23:30,618       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22,
2026-04-01T12:23:30,619       inlined from ‘static void Avogadro::Core::SpaceGroups::fillTranslationalCopies(Avogadro::Core::Molecule&, double)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/spacegroups.cpp:403:25:
2026-04-01T12:23:30,620   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:23:30,622    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:23:30,623         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:23:30,624   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:23:30,626       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22,
2026-04-01T12:23:30,627       inlined from ‘static void Avogadro::Core::SpaceGroups::fillTranslationalCopies(Avogadro::Core::Molecule&, double)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/spacegroups.cpp:407:25:
2026-04-01T12:23:30,628   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:23:30,630    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:23:30,631         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:23:30,632   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:23:30,634       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:23:30,635       inlined from ‘bool Avogadro::Core::Molecule::setAtomPosition3d(Avogadro::Index, const Avogadro::Vector3&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:1207:27,
2026-04-01T12:23:30,636       inlined from ‘void Avogadro::Core::AtomTemplate<Molecule_T>::setPosition3d(const Avogadro::Vector3&) [with Molecule_T = Avogadro::Core::Molecule]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/atom.h:317:32,
2026-04-01T12:23:30,637       inlined from ‘static void Avogadro::Core::SpaceGroups::fillTranslationalCopies(Avogadro::Core::Molecule&, double)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/spacegroups.cpp:432:28:
2026-04-01T12:23:30,638   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:23:30,639    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:23:30,640         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:23:30,641   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:23:30,643       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:23:30,644       inlined from ‘bool Avogadro::Core::Molecule::setAtomPosition3d(Avogadro::Index, const Avogadro::Vector3&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:1207:27,
2026-04-01T12:23:30,645       inlined from ‘void Avogadro::Core::AtomTemplate<Molecule_T>::setPosition3d(const Avogadro::Vector3&) [with Molecule_T = Avogadro::Core::Molecule]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/atom.h:317:32,
2026-04-01T12:23:30,646       inlined from ‘static void Avogadro::Core::SpaceGroups::fillUnitCell(Avogadro::Core::Molecule&, short unsigned int, double, bool, bool)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/spacegroups.cpp:301:28:
2026-04-01T12:23:30,647   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:23:30,649    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:23:30,650         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:23:30,651   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:23:30,652       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:23:30,653       inlined from ‘bool Avogadro::Core::Molecule::setAtomPosition3d(Avogadro::Index, const Avogadro::Vector3&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:1207:27,
2026-04-01T12:23:30,654       inlined from ‘static void Avogadro::Core::SpaceGroups::fillUnitCell(Avogadro::Core::Molecule&, short unsigned int, double, bool, bool)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/spacegroups.cpp:353:30:
2026-04-01T12:23:30,656   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:23:30,657    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:23:30,658         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:23:35,474   [36/88] /usr/bin/arm-linux-gnueabihf-g++ -DCore_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/core/CMakeFiles/Core.dir/variantmap.cpp.o -MF avogadro/core/CMakeFiles/Core.dir/variantmap.cpp.o.d -o avogadro/core/CMakeFiles/Core.dir/variantmap.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/variantmap.cpp
2026-04-01T12:23:40,870   [37/88] /usr/bin/arm-linux-gnueabihf-g++ -DCalc_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/calc -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/cppoptlib/include -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/calc/CMakeFiles/Calc.dir/chargemodel.cpp.o -MF avogadro/calc/CMakeFiles/Calc.dir/chargemodel.cpp.o.d -o avogadro/calc/CMakeFiles/Calc.dir/chargemodel.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/calc/chargemodel.cpp
2026-04-01T12:23:54,547   [38/88] /usr/bin/arm-linux-gnueabihf-g++ -DCalc_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/calc -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/cppoptlib/include -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/calc/CMakeFiles/Calc.dir/chargemanager.cpp.o -MF avogadro/calc/CMakeFiles/Calc.dir/chargemanager.cpp.o.d -o avogadro/calc/CMakeFiles/Calc.dir/chargemanager.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/calc/chargemanager.cpp
2026-04-01T12:23:55,333   [39/88] /usr/bin/arm-linux-gnueabihf-g++ -DCalc_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/calc -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/cppoptlib/include -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/calc/CMakeFiles/Calc.dir/defaultmodel.cpp.o -MF avogadro/calc/CMakeFiles/Calc.dir/defaultmodel.cpp.o.d -o avogadro/calc/CMakeFiles/Calc.dir/defaultmodel.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/calc/defaultmodel.cpp
2026-04-01T12:24:07,642   [40/88] /usr/bin/arm-linux-gnueabihf-g++ -DCore_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/core/CMakeFiles/Core.dir/slaterset.cpp.o -MF avogadro/core/CMakeFiles/Core.dir/slaterset.cpp.o.d -o avogadro/core/CMakeFiles/Core.dir/slaterset.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/slaterset.cpp
2026-04-01T12:24:12,968   [41/88] /usr/bin/arm-linux-gnueabihf-g++ -DCalc_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/calc -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/cppoptlib/include -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/calc/CMakeFiles/Calc.dir/energycalculator.cpp.o -MF avogadro/calc/CMakeFiles/Calc.dir/energycalculator.cpp.o.d -o avogadro/calc/CMakeFiles/Calc.dir/energycalculator.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/calc/energycalculator.cpp
2026-04-01T12:24:12,970   In file included from /usr/include/c++/12/vector:70,
2026-04-01T12:24:12,971                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:12,
2026-04-01T12:24:12,973                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:13,
2026-04-01T12:24:12,974                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/calc/energycalculator.h:12,
2026-04-01T12:24:12,976                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/calc/energycalculator.cpp:6:
2026-04-01T12:24:12,977   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const Avogadro::Core::Constraint&}; _Tp = Avogadro::Core::Constraint; _Alloc = std::allocator<Avogadro::Core::Constraint>]’:
2026-04-01T12:24:12,979   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<Avogadro::Core::Constraint>::iterator’ changed in GCC 7.1
2026-04-01T12:24:12,980     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:24:12,982         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:24:12,983   In file included from /usr/include/c++/12/vector:64:
2026-04-01T12:24:12,985   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Avogadro::Core::Constraint; _Alloc = std::allocator<Avogadro::Core::Constraint>]’,
2026-04-01T12:24:12,986       inlined from ‘std::vector<Avogadro::Core::Constraint> Avogadro::Calc::EnergyCalculator::constraints() const’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/calc/energycalculator.cpp:146:29:
2026-04-01T12:24:12,988   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Avogadro::Core::Constraint*, std::vector<Avogadro::Core::Constraint> >’ changed in GCC 7.1
2026-04-01T12:24:12,990    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:24:12,991         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:24:12,993   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Avogadro::Core::Constraint; _Alloc = std::allocator<Avogadro::Core::Constraint>]’,
2026-04-01T12:24:12,995       inlined from ‘std::vector<Avogadro::Core::Constraint> Avogadro::Calc::EnergyCalculator::constraints() const’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/calc/energycalculator.cpp:149:29:
2026-04-01T12:24:12,996   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Avogadro::Core::Constraint*, std::vector<Avogadro::Core::Constraint> >’ changed in GCC 7.1
2026-04-01T12:24:12,998    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:24:12,999         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:24:12,999   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Avogadro::Core::Constraint; _Alloc = std::allocator<Avogadro::Core::Constraint>]’,
2026-04-01T12:24:13,000       inlined from ‘std::vector<Avogadro::Core::Constraint> Avogadro::Calc::EnergyCalculator::constraints() const’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/calc/energycalculator.cpp:152:29:
2026-04-01T12:24:13,001   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Avogadro::Core::Constraint*, std::vector<Avogadro::Core::Constraint> >’ changed in GCC 7.1
2026-04-01T12:24:13,002    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:24:13,003         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:24:13,004   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Avogadro::Core::Constraint; _Alloc = std::allocator<Avogadro::Core::Constraint>]’,
2026-04-01T12:24:13,005       inlined from ‘std::vector<Avogadro::Core::Constraint> Avogadro::Calc::EnergyCalculator::constraints() const’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/calc/energycalculator.cpp:155:29:
2026-04-01T12:24:13,005   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Avogadro::Core::Constraint*, std::vector<Avogadro::Core::Constraint> >’ changed in GCC 7.1
2026-04-01T12:24:13,006    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:24:13,008         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:24:13,018   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Avogadro::Core::Constraint; _Alloc = std::allocator<Avogadro::Core::Constraint>]’,
2026-04-01T12:24:13,019       inlined from ‘void Avogadro::Calc::EnergyCalculator::setConstraints(const std::vector<Avogadro::Core::Constraint>&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/calc/energycalculator.cpp:119:40:
2026-04-01T12:24:13,020   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Avogadro::Core::Constraint*, std::vector<Avogadro::Core::Constraint> >’ changed in GCC 7.1
2026-04-01T12:24:13,021    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:24:13,024         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:24:13,025   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Avogadro::Core::Constraint; _Alloc = std::allocator<Avogadro::Core::Constraint>]’,
2026-04-01T12:24:13,026       inlined from ‘void Avogadro::Calc::EnergyCalculator::setConstraints(const std::vector<Avogadro::Core::Constraint>&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/calc/energycalculator.cpp:122:37:
2026-04-01T12:24:13,027   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Avogadro::Core::Constraint*, std::vector<Avogadro::Core::Constraint> >’ changed in GCC 7.1
2026-04-01T12:24:13,028    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:24:13,029         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:24:13,030   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Avogadro::Core::Constraint; _Alloc = std::allocator<Avogadro::Core::Constraint>]’,
2026-04-01T12:24:13,031       inlined from ‘void Avogadro::Calc::EnergyCalculator::setConstraints(const std::vector<Avogadro::Core::Constraint>&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/calc/energycalculator.cpp:125:39:
2026-04-01T12:24:13,032   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Avogadro::Core::Constraint*, std::vector<Avogadro::Core::Constraint> >’ changed in GCC 7.1
2026-04-01T12:24:13,033    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:24:13,034         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:24:13,035   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Avogadro::Core::Constraint; _Alloc = std::allocator<Avogadro::Core::Constraint>]’,
2026-04-01T12:24:13,036       inlined from ‘void Avogadro::Calc::EnergyCalculator::setConstraints(const std::vector<Avogadro::Core::Constraint>&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/calc/energycalculator.cpp:128:42:
2026-04-01T12:24:13,037   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Avogadro::Core::Constraint*, std::vector<Avogadro::Core::Constraint> >’ changed in GCC 7.1
2026-04-01T12:24:13,038    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:24:13,039         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:24:18,378   [42/88] /usr/bin/arm-linux-gnueabihf-g++ -DCalc_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/calc -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/cppoptlib/include -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/calc/CMakeFiles/Calc.dir/energyoptimizer.cpp.o -MF avogadro/calc/CMakeFiles/Calc.dir/energyoptimizer.cpp.o.d -o avogadro/calc/CMakeFiles/Calc.dir/energyoptimizer.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/calc/energyoptimizer.cpp
2026-04-01T12:24:19,913   [43/88] /usr/bin/arm-linux-gnueabihf-g++ -DCalc_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/calc -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/cppoptlib/include -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/calc/CMakeFiles/Calc.dir/energymanager.cpp.o -MF avogadro/calc/CMakeFiles/Calc.dir/energymanager.cpp.o.d -o avogadro/calc/CMakeFiles/Calc.dir/energymanager.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/calc/energymanager.cpp
2026-04-01T12:24:31,675   [44/88] /usr/bin/arm-linux-gnueabihf-g++ -DCalc_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/calc -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/cppoptlib/include -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/calc/CMakeFiles/Calc.dir/lennardjones.cpp.o -MF avogadro/calc/CMakeFiles/Calc.dir/lennardjones.cpp.o.d -o avogadro/calc/CMakeFiles/Calc.dir/lennardjones.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/calc/lennardjones.cpp
2026-04-01T12:24:37,814   [45/88] /usr/bin/arm-linux-gnueabihf-g++ -DIO_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/io -I/tmp/tmpxp_nina1/build/avogadro/core -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/struct -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/io/CMakeFiles/IO.dir/cmsgpackformat.cpp.o -MF avogadro/io/CMakeFiles/IO.dir/cmsgpackformat.cpp.o.d -o avogadro/io/CMakeFiles/IO.dir/cmsgpackformat.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/cmsgpackformat.cpp
2026-04-01T12:24:41,192   [46/88] /usr/bin/arm-linux-gnueabihf-g++ -DCore_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/core/CMakeFiles/Core.dir/molecule.cpp.o -MF avogadro/core/CMakeFiles/Core.dir/molecule.cpp.o.d -o avogadro/core/CMakeFiles/Core.dir/molecule.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.cpp
2026-04-01T12:24:41,193   In file included from /usr/include/c++/12/vector:70,
2026-04-01T12:24:41,194                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:12,
2026-04-01T12:24:41,195                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:13,
2026-04-01T12:24:41,197                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.cpp:6:
2026-04-01T12:24:41,198   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const Avogadro::Core::Constraint&}; _Tp = Avogadro::Core::Constraint; _Alloc = std::allocator<Avogadro::Core::Constraint>]’:
2026-04-01T12:24:41,199   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<Avogadro::Core::Constraint>::iterator’ changed in GCC 7.1
2026-04-01T12:24:41,200     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:24:41,201         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:24:41,203   In file included from /usr/include/c++/12/vector:64:
2026-04-01T12:24:41,204   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Avogadro::Core::Constraint; _Alloc = std::allocator<Avogadro::Core::Constraint>]’,
2026-04-01T12:24:41,205       inlined from ‘void Avogadro::Core::Molecule::addConstraint(Avogadro::Real, Avogadro::Index, Avogadro::Index, Avogadro::Index, Avogadro::Index)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.cpp:370:26:
2026-04-01T12:24:41,206   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Avogadro::Core::Constraint*, std::vector<Avogadro::Core::Constraint> >’ changed in GCC 7.1
2026-04-01T12:24:41,207    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:24:41,208         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:24:41,209   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:24:41,210   /usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:24:41,211     523 |     vector<_Tp, _Alloc>::
2026-04-01T12:24:41,213         |     ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:24:41,213   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const Eigen::Matrix<double, 3, 1, 0, 3, 1>&}; _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:24:41,214   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:24:41,215     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:24:41,216         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:24:41,217   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:24:41,218       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22,
2026-04-01T12:24:41,219       inlined from ‘Avogadro::Core::Molecule::AtomType Avogadro::Core::Molecule::addAtom(unsigned char, Avogadro::Vector3)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.cpp:611:28:
2026-04-01T12:24:41,220   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:24:41,221    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:24:41,222         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:24:41,223   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:24:41,228       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:24:41,233       inlined from ‘void Avogadro::Core::Molecule::estimateVelocities()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.cpp:1408:27:
2026-04-01T12:24:41,233   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:24:41,234    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:24:41,235         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:24:41,236   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’:
2026-04-01T12:24:41,237   /usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2026-04-01T12:24:41,239     523 |     vector<_Tp, _Alloc>::
2026-04-01T12:24:41,240         |     ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:24:41,241   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:24:41,248       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = double]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:24:41,258       inlined from ‘bool Avogadro::Core::Molecule::setTimeStep(double, int)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.cpp:1467:23:
2026-04-01T12:24:41,259   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:24:41,260    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:24:41,261         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:24:41,262   In file included from /usr/include/c++/12/set:60,
2026-04-01T12:24:41,263                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/graph.h:13,
2026-04-01T12:24:41,264                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:17:
2026-04-01T12:24:41,265   /usr/include/c++/12/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const unsigned char&>, std::tuple<>}; _Key = unsigned char; _Val = std::pair<const unsigned char, double>; _KeyOfValue = std::_Select1st<std::pair<const unsigned char, double> >; _Compare = std::less<unsigned char>; _Alloc = std::allocator<std::pair<const unsigned char, double> >]’:
2026-04-01T12:24:41,266   /usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type ‘std::_Rb_tree<unsigned char, std::pair<const unsigned char, double>, std::_Select1st<std::pair<const unsigned char, double> >, std::less<unsigned char>, std::allocator<std::pair<const unsigned char, double> > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:24:41,267    2457 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
2026-04-01T12:24:41,268         |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:24:41,269   In file included from /usr/include/c++/12/map:61,
2026-04-01T12:24:41,271                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/variantmap.h:13,
2026-04-01T12:24:41,272                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:19:
2026-04-01T12:24:41,274   In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned char; _Tp = double; _Compare = std::less<unsigned char>; _Alloc = std::allocator<std::pair<const unsigned char, double> >]’,
2026-04-01T12:24:41,275       inlined from ‘std::map<unsigned char, unsigned int> Avogadro::Core::Molecule::composition() const’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.cpp:1678:34:
2026-04-01T12:24:41,276   /usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type ‘std::_Rb_tree<unsigned char, std::pair<const unsigned char, double>, std::_Select1st<std::pair<const unsigned char, double> >, std::less<unsigned char>, std::allocator<std::pair<const unsigned char, double> > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:24:41,277     511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
2026-04-01T12:24:41,278         |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:24:41,279     512 |                                             std::tuple<const key_type&>(__k),
2026-04-01T12:24:41,280         |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:24:41,281     513 |                                             std::tuple<>());
2026-04-01T12:24:41,283         |                                             ~~~~~~~~~~~~~~~
2026-04-01T12:24:41,288   In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned char; _Tp = double; _Compare = std::less<unsigned char>; _Alloc = std::allocator<std::pair<const unsigned char, double> >]’,
2026-04-01T12:24:41,298       inlined from ‘std::map<unsigned char, unsigned int> Avogadro::Core::Molecule::composition() const’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.cpp:1683:34:
2026-04-01T12:24:41,299   /usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type ‘std::_Rb_tree<unsigned char, std::pair<const unsigned char, double>, std::_Select1st<std::pair<const unsigned char, double> >, std::less<unsigned char>, std::allocator<std::pair<const unsigned char, double> > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:24:41,300     511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
2026-04-01T12:24:41,301         |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:24:41,302     512 |                                             std::tuple<const key_type&>(__k),
2026-04-01T12:24:41,303         |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:24:41,304     513 |                                             std::tuple<>());
2026-04-01T12:24:41,304         |                                             ~~~~~~~~~~~~~~~
2026-04-01T12:24:50,104   [47/88] /usr/bin/arm-linux-gnueabihf-g++ -DIO_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/io -I/tmp/tmpxp_nina1/build/avogadro/core -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/struct -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/io/CMakeFiles/IO.dir/fileformat.cpp.o -MF avogadro/io/CMakeFiles/IO.dir/fileformat.cpp.o.d -o avogadro/io/CMakeFiles/IO.dir/fileformat.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/fileformat.cpp
2026-04-01T12:24:52,311   [48/88] /usr/bin/arm-linux-gnueabihf-g++ -DIO_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/io -I/tmp/tmpxp_nina1/build/avogadro/core -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/struct -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/io/CMakeFiles/IO.dir/cmlformat.cpp.o -MF avogadro/io/CMakeFiles/IO.dir/cmlformat.cpp.o.d -o avogadro/io/CMakeFiles/IO.dir/cmlformat.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/cmlformat.cpp
2026-04-01T12:24:52,313   In file included from /usr/include/c++/12/vector:70,
2026-04-01T12:24:52,314                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/fileformat.h:15,
2026-04-01T12:24:52,315                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/cmlformat.h:9,
2026-04-01T12:24:52,317                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/cmlformat.cpp:6:
2026-04-01T12:24:52,318   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 2, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 2, 1> >]’:
2026-04-01T12:24:52,320   /usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 2, 1>, std::allocator<Eigen::Matrix<double, 2, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:24:52,322     523 |     vector<_Tp, _Alloc>::
2026-04-01T12:24:52,323         |     ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:24:52,324   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:24:52,325   /usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:24:52,327   In file included from /usr/include/c++/12/vector:64:
2026-04-01T12:24:52,328   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:24:52,330       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:24:52,331       inlined from ‘bool Avogadro::Core::Molecule::setAtomPosition3d(Avogadro::Index, const Avogadro::Vector3&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:1207:27,
2026-04-01T12:24:52,332       inlined from ‘void Avogadro::Core::AtomTemplate<Molecule_T>::setPosition3d(const Avogadro::Vector3&) [with Molecule_T = Avogadro::Core::Molecule]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/atom.h:317:32,
2026-04-01T12:24:52,348       inlined from ‘bool Avogadro::Io::{anonymous}::CmlFormatPrivate::atoms()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/cmlformat.cpp:210:33:
2026-04-01T12:24:52,368   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:24:52,369    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:24:52,371         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:24:52,372   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:24:52,373       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:24:52,374       inlined from ‘bool Avogadro::Core::Molecule::setAtomPosition3d(Avogadro::Index, const Avogadro::Vector3&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:1207:27,
2026-04-01T12:24:52,376       inlined from ‘void Avogadro::Core::AtomTemplate<Molecule_T>::setPosition3d(const Avogadro::Vector3&) [with Molecule_T = Avogadro::Core::Molecule]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/atom.h:317:32,
2026-04-01T12:24:52,377       inlined from ‘bool Avogadro::Io::{anonymous}::CmlFormatPrivate::atoms()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/cmlformat.cpp:234:31:
2026-04-01T12:24:52,378   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:24:52,379    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:24:52,381         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:24:52,382   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 2, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 2, 1> >]’,
2026-04-01T12:24:52,382       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 2, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:24:52,383       inlined from ‘bool Avogadro::Core::Molecule::setAtomPosition2d(Avogadro::Index, const Avogadro::Vector2&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:1182:27,
2026-04-01T12:24:52,384       inlined from ‘void Avogadro::Core::AtomTemplate<Molecule_T>::setPosition2d(const Avogadro::Vector2&) [with Molecule_T = Avogadro::Core::Molecule]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/atom.h:303:32,
2026-04-01T12:24:52,385       inlined from ‘bool Avogadro::Io::{anonymous}::CmlFormatPrivate::atoms()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/cmlformat.cpp:253:33:
2026-04-01T12:24:52,386   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 2, 1>*, std::vector<Eigen::Matrix<double, 2, 1>, std::allocator<Eigen::Matrix<double, 2, 1> > > >’ changed in GCC 7.1
2026-04-01T12:24:52,387    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:24:52,388         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:24:54,120   [49/88] /usr/bin/arm-linux-gnueabihf-g++ -DCalc_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/calc -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/cppoptlib/include -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/calc/CMakeFiles/Calc.dir/uff.cpp.o -MF avogadro/calc/CMakeFiles/Calc.dir/uff.cpp.o.d -o avogadro/calc/CMakeFiles/Calc.dir/uff.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/calc/uff.cpp
2026-04-01T12:24:54,122   In file included from /usr/include/c++/12/vector:70,
2026-04-01T12:24:54,123                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:12,
2026-04-01T12:24:54,124                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:13,
2026-04-01T12:24:54,126                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/calc/energycalculator.h:12,
2026-04-01T12:24:54,127                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/calc/uff.h:10,
2026-04-01T12:24:54,128                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/calc/uff.cpp:6:
2026-04-01T12:24:54,129   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const Avogadro::Calc::UFFBond&}; _Tp = Avogadro::Calc::UFFBond; _Alloc = std::allocator<Avogadro::Calc::UFFBond>]’:
2026-04-01T12:24:54,130   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<Avogadro::Calc::UFFBond>::iterator’ changed in GCC 7.1
2026-04-01T12:24:54,131     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:24:54,133         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:24:54,133   In file included from /usr/include/c++/12/vector:64:
2026-04-01T12:24:54,134   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Avogadro::Calc::UFFBond; _Alloc = std::allocator<Avogadro::Calc::UFFBond>]’,
2026-04-01T12:24:54,135       inlined from ‘void Avogadro::Calc::UFFPrivate::setBonds()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/calc/uff.cpp:340:24:
2026-04-01T12:24:54,136   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Avogadro::Calc::UFFBond*, std::vector<Avogadro::Calc::UFFBond> >’ changed in GCC 7.1
2026-04-01T12:24:54,137    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:24:54,138         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:24:54,140   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const Avogadro::Calc::UFFAngle&}; _Tp = Avogadro::Calc::UFFAngle; _Alloc = std::allocator<Avogadro::Calc::UFFAngle>]’:
2026-04-01T12:24:54,141   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<Avogadro::Calc::UFFAngle>::iterator’ changed in GCC 7.1
2026-04-01T12:24:54,142     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:24:54,148         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:24:54,158   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Avogadro::Calc::UFFAngle; _Alloc = std::allocator<Avogadro::Calc::UFFAngle>]’,
2026-04-01T12:24:54,159       inlined from ‘void Avogadro::Calc::UFFPrivate::setAngles()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/calc/uff.cpp:426:25:
2026-04-01T12:24:54,161   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Avogadro::Calc::UFFAngle*, std::vector<Avogadro::Calc::UFFAngle> >’ changed in GCC 7.1
2026-04-01T12:24:54,163    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:24:54,165         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:24:54,166   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const Avogadro::Calc::UFFOOP&}; _Tp = Avogadro::Calc::UFFOOP; _Alloc = std::allocator<Avogadro::Calc::UFFOOP>]’:
2026-04-01T12:24:54,169   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<Avogadro::Calc::UFFOOP>::iterator’ changed in GCC 7.1
2026-04-01T12:24:54,170     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:24:54,171         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:24:54,172   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Avogadro::Calc::UFFOOP; _Alloc = std::allocator<Avogadro::Calc::UFFOOP>]’,
2026-04-01T12:24:54,173       inlined from ‘void Avogadro::Calc::UFFPrivate::setOOPs()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/calc/uff.cpp:505:23:
2026-04-01T12:24:54,174   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Avogadro::Calc::UFFOOP*, std::vector<Avogadro::Calc::UFFOOP> >’ changed in GCC 7.1
2026-04-01T12:24:54,175    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:24:54,176         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:24:54,177   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const Avogadro::Calc::UFFTorsion&}; _Tp = Avogadro::Calc::UFFTorsion; _Alloc = std::allocator<Avogadro::Calc::UFFTorsion>]’:
2026-04-01T12:24:54,178   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<Avogadro::Calc::UFFTorsion>::iterator’ changed in GCC 7.1
2026-04-01T12:24:54,180     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:24:54,181         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:24:54,182   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Avogadro::Calc::UFFTorsion; _Alloc = std::allocator<Avogadro::Calc::UFFTorsion>]’,
2026-04-01T12:24:54,183       inlined from ‘void Avogadro::Calc::UFFPrivate::setTorsions()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/calc/uff.cpp:622:27:
2026-04-01T12:24:54,186   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Avogadro::Calc::UFFTorsion*, std::vector<Avogadro::Calc::UFFTorsion> >’ changed in GCC 7.1
2026-04-01T12:24:54,187    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:24:54,188         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:24:54,189   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const Avogadro::Calc::UFFVdW&}; _Tp = Avogadro::Calc::UFFVdW; _Alloc = std::allocator<Avogadro::Calc::UFFVdW>]’:
2026-04-01T12:24:54,190   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<Avogadro::Calc::UFFVdW>::iterator’ changed in GCC 7.1
2026-04-01T12:24:54,191     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:24:54,192         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:24:54,193   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Avogadro::Calc::UFFVdW; _Alloc = std::allocator<Avogadro::Calc::UFFVdW>]’,
2026-04-01T12:24:54,194       inlined from ‘void Avogadro::Calc::UFFPrivate::setVdWs(const Eigen::VectorXd&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/calc/uff.cpp:686:25:
2026-04-01T12:24:54,195   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Avogadro::Calc::UFFVdW*, std::vector<Avogadro::Calc::UFFVdW> >’ changed in GCC 7.1
2026-04-01T12:24:54,196    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:24:54,208         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:25:02,985   [50/88] /usr/bin/arm-linux-gnueabihf-g++ -DIO_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/io -I/tmp/tmpxp_nina1/build/avogadro/core -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/struct -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/io/CMakeFiles/IO.dir/fileformatmanager.cpp.o -MF avogadro/io/CMakeFiles/IO.dir/fileformatmanager.cpp.o.d -o avogadro/io/CMakeFiles/IO.dir/fileformatmanager.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/fileformatmanager.cpp
2026-04-01T12:25:03,985   [51/88] /usr/bin/arm-linux-gnueabihf-g++ -DIO_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/io -I/tmp/tmpxp_nina1/build/avogadro/core -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/struct -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/io/CMakeFiles/IO.dir/dcdformat.cpp.o -MF avogadro/io/CMakeFiles/IO.dir/dcdformat.cpp.o.d -o avogadro/io/CMakeFiles/IO.dir/dcdformat.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/dcdformat.cpp
2026-04-01T12:25:03,986   In file included from /usr/include/c++/12/vector:70,
2026-04-01T12:25:03,987                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/fileformat.h:15,
2026-04-01T12:25:03,988                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/dcdformat.h:9,
2026-04-01T12:25:03,989                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/dcdformat.cpp:6:
2026-04-01T12:25:03,990   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:25:03,990   /usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:25:03,991     523 |     vector<_Tp, _Alloc>::
2026-04-01T12:25:03,992         |     ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:25:03,993   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const Eigen::Matrix<double, 3, 1, 0, 3, 1>&}; _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:25:03,994   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:25:03,995     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:25:03,996         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:25:03,997   In file included from /usr/include/c++/12/vector:64:
2026-04-01T12:25:03,998   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:25:03,999       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:25:04,000       inlined from ‘bool Avogadro::Core::Molecule::setAtomPosition3d(Avogadro::Index, const Avogadro::Vector3&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:1207:27,
2026-04-01T12:25:04,001       inlined from ‘void Avogadro::Core::AtomTemplate<Molecule_T>::setPosition3d(const Avogadro::Vector3&) [with Molecule_T = Avogadro::Core::Molecule]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/atom.h:317:32,
2026-04-01T12:25:04,002       inlined from ‘virtual bool Avogadro::Io::DcdFormat::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/dcdformat.cpp:309:26:
2026-04-01T12:25:04,003   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:25:04,003    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:25:04,004         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:25:04,005   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:25:04,006       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22,
2026-04-01T12:25:04,007       inlined from ‘virtual bool Avogadro::Io::DcdFormat::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/dcdformat.cpp:385:26:
2026-04-01T12:25:04,008   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:25:04,009    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:25:04,010         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:25:22,796   [52/88] /usr/bin/arm-linux-gnueabihf-g++ -DIO_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/io -I/tmp/tmpxp_nina1/build/avogadro/core -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/struct -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/io/CMakeFiles/IO.dir/gromacsformat.cpp.o -MF avogadro/io/CMakeFiles/IO.dir/gromacsformat.cpp.o.d -o avogadro/io/CMakeFiles/IO.dir/gromacsformat.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/gromacsformat.cpp
2026-04-01T12:25:22,797   In file included from /usr/include/c++/12/vector:70,
2026-04-01T12:25:22,798                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/fileformat.h:15,
2026-04-01T12:25:22,799                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/gromacsformat.h:10,
2026-04-01T12:25:22,801                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/gromacsformat.cpp:6:
2026-04-01T12:25:22,802   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:25:22,804   /usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:25:22,805     523 |     vector<_Tp, _Alloc>::
2026-04-01T12:25:22,806         |     ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:25:22,807   In file included from /usr/include/c++/12/vector:64:
2026-04-01T12:25:22,808   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:25:22,809       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:25:22,810       inlined from ‘bool Avogadro::Core::Molecule::setAtomPosition3d(Avogadro::Index, const Avogadro::Vector3&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:1207:27,
2026-04-01T12:25:22,811       inlined from ‘void Avogadro::Core::AtomTemplate<Molecule_T>::setPosition3d(const Avogadro::Vector3&) [with Molecule_T = Avogadro::Core::Molecule]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/atom.h:317:32,
2026-04-01T12:25:22,812       inlined from ‘virtual bool Avogadro::Io::GromacsFormat::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/gromacsformat.cpp:171:23:
2026-04-01T12:25:22,814   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:25:22,815    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:25:22,815         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:25:27,282   [53/88] /usr/bin/arm-linux-gnueabihf-g++ -DIO_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/io -I/tmp/tmpxp_nina1/build/avogadro/core -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/struct -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/io/CMakeFiles/IO.dir/sdfformat.cpp.o -MF avogadro/io/CMakeFiles/IO.dir/sdfformat.cpp.o.d -o avogadro/io/CMakeFiles/IO.dir/sdfformat.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/sdfformat.cpp
2026-04-01T12:25:36,507   [54/88] /usr/bin/arm-linux-gnueabihf-g++ -DIO_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/io -I/tmp/tmpxp_nina1/build/avogadro/core -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/struct -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/io/CMakeFiles/IO.dir/lammpsformat.cpp.o -MF avogadro/io/CMakeFiles/IO.dir/lammpsformat.cpp.o.d -o avogadro/io/CMakeFiles/IO.dir/lammpsformat.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/lammpsformat.cpp
2026-04-01T12:25:36,508   In file included from /usr/include/c++/12/vector:70,
2026-04-01T12:25:36,509                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/fileformat.h:15,
2026-04-01T12:25:36,510                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/lammpsformat.h:9,
2026-04-01T12:25:36,511                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/lammpsformat.cpp:6:
2026-04-01T12:25:36,513   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:25:36,514   /usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:25:36,514     523 |     vector<_Tp, _Alloc>::
2026-04-01T12:25:36,515         |     ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:25:36,517   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const Eigen::Matrix<double, 3, 1, 0, 3, 1>&}; _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:25:36,518   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:25:36,519     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:25:36,520         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:25:36,521   In file included from /usr/include/c++/12/vector:64:
2026-04-01T12:25:36,522   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:25:36,523       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:25:36,524       inlined from ‘bool Avogadro::Core::Molecule::setAtomPosition3d(Avogadro::Index, const Avogadro::Vector3&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:1207:27,
2026-04-01T12:25:36,526       inlined from ‘void Avogadro::Core::AtomTemplate<Molecule_T>::setPosition3d(const Avogadro::Vector3&) [with Molecule_T = Avogadro::Core::Molecule]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/atom.h:317:32,
2026-04-01T12:25:36,526       inlined from ‘virtual bool Avogadro::Io::LammpsTrajectoryFormat::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/lammpsformat.cpp:211:26:
2026-04-01T12:25:36,527   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:25:36,529    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:25:36,530         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:25:36,531   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:25:36,532       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22,
2026-04-01T12:25:36,533       inlined from ‘virtual bool Avogadro::Io::LammpsTrajectoryFormat::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/lammpsformat.cpp:397:26:
2026-04-01T12:25:36,534   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:25:36,535    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:25:36,536         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:25:37,347   [55/88] /usr/bin/arm-linux-gnueabihf-g++ -DIO_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/io -I/tmp/tmpxp_nina1/build/avogadro/core -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/struct -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/io/CMakeFiles/IO.dir/mdlformat.cpp.o -MF avogadro/io/CMakeFiles/IO.dir/mdlformat.cpp.o.d -o avogadro/io/CMakeFiles/IO.dir/mdlformat.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/mdlformat.cpp
2026-04-01T12:25:37,348   In file included from /usr/include/c++/12/vector:70,
2026-04-01T12:25:37,349                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/fileformat.h:15,
2026-04-01T12:25:37,350                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/mdlformat.h:9,
2026-04-01T12:25:37,351                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/mdlformat.cpp:6:
2026-04-01T12:25:37,352   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:25:37,353   /usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:25:37,353     523 |     vector<_Tp, _Alloc>::
2026-04-01T12:25:37,354         |     ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:25:37,355   In file included from /usr/include/c++/12/vector:64:
2026-04-01T12:25:37,356   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:25:37,357       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:25:37,358       inlined from ‘bool Avogadro::Core::Molecule::setAtomPosition3d(Avogadro::Index, const Avogadro::Vector3&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:1207:27:
2026-04-01T12:25:37,359   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:25:37,360    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:25:37,361         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:25:37,362   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:25:37,363       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:25:37,364       inlined from ‘bool Avogadro::Core::Molecule::setAtomPosition3d(Avogadro::Index, const Avogadro::Vector3&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:1207:27,
2026-04-01T12:25:37,365       inlined from ‘void Avogadro::Core::AtomTemplate<Molecule_T>::setPosition3d(const Avogadro::Vector3&) [with Molecule_T = Avogadro::Core::Molecule]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/atom.h:317:32,
2026-04-01T12:25:37,366       inlined from ‘bool Avogadro::Io::MdlFormat::readV3000(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/mdlformat.cpp:701:26:
2026-04-01T12:25:37,367   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:25:37,368    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:25:37,369         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:25:37,370   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const Eigen::Matrix<double, 3, 1, 0, 3, 1>&}; _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:25:37,371   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:25:37,372     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:25:37,372         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:25:37,373   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:25:37,374       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22:
2026-04-01T12:25:37,375   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:25:37,376    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:25:37,376         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:25:44,664   [56/88] /usr/bin/arm-linux-gnueabihf-g++ -DIO_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/io -I/tmp/tmpxp_nina1/build/avogadro/core -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/struct -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/io/CMakeFiles/IO.dir/pdbformat.cpp.o -MF avogadro/io/CMakeFiles/IO.dir/pdbformat.cpp.o.d -o avogadro/io/CMakeFiles/IO.dir/pdbformat.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/pdbformat.cpp
2026-04-01T12:25:44,665   In file included from /usr/include/c++/12/vector:70,
2026-04-01T12:25:44,666                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/fileformat.h:15,
2026-04-01T12:25:44,667                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/pdbformat.h:9,
2026-04-01T12:25:44,668                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/pdbformat.cpp:6:
2026-04-01T12:25:44,669   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:25:44,671   /usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:25:44,672     523 |     vector<_Tp, _Alloc>::
2026-04-01T12:25:44,673         |     ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:25:44,674   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const Eigen::Matrix<double, 3, 1, 0, 3, 1>&}; _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:25:44,675   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:25:44,677     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:25:44,678         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:25:44,679   In file included from /usr/include/c++/12/vector:64:
2026-04-01T12:25:44,680   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:25:44,681       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22,
2026-04-01T12:25:44,682       inlined from ‘virtual bool Avogadro::Io::PdbFormat::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/pdbformat.cpp:217:35:
2026-04-01T12:25:44,683   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:25:44,684    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:25:44,698         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:25:44,708   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:25:44,709       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:25:44,710       inlined from ‘bool Avogadro::Core::Molecule::setAtomPosition3d(Avogadro::Index, const Avogadro::Vector3&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:1207:27,
2026-04-01T12:25:44,712       inlined from ‘void Avogadro::Core::AtomTemplate<Molecule_T>::setPosition3d(const Avogadro::Vector3&) [with Molecule_T = Avogadro::Core::Molecule]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/atom.h:317:32,
2026-04-01T12:25:44,713       inlined from ‘virtual bool Avogadro::Io::PdbFormat::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/pdbformat.cpp:220:30:
2026-04-01T12:25:44,714   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:25:44,716    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:25:44,717         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:25:44,718   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:25:44,719       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22,
2026-04-01T12:25:44,720       inlined from ‘virtual bool Avogadro::Io::PdbFormat::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/pdbformat.cpp:226:28:
2026-04-01T12:25:44,721   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:25:44,722    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:25:44,723         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:25:58,929   [57/88] /usr/bin/arm-linux-gnueabihf-g++ -DIO_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/io -I/tmp/tmpxp_nina1/build/avogadro/core -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/struct -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/io/CMakeFiles/IO.dir/trrformat.cpp.o -MF avogadro/io/CMakeFiles/IO.dir/trrformat.cpp.o.d -o avogadro/io/CMakeFiles/IO.dir/trrformat.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/trrformat.cpp
2026-04-01T12:25:58,930   In file included from /usr/include/c++/12/vector:70,
2026-04-01T12:25:58,931                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/fileformat.h:15,
2026-04-01T12:25:58,932                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/trrformat.h:9,
2026-04-01T12:25:58,933                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/trrformat.cpp:6:
2026-04-01T12:25:58,934   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:25:58,935   /usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:25:58,936     523 |     vector<_Tp, _Alloc>::
2026-04-01T12:25:58,937         |     ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:25:58,938   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const Eigen::Matrix<double, 3, 1, 0, 3, 1>&}; _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:25:58,939   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:25:58,940     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:25:58,941         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:25:58,942   In file included from /usr/include/c++/12/vector:64:
2026-04-01T12:25:58,943   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:25:58,944       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:25:58,945       inlined from ‘bool Avogadro::Core::Molecule::setAtomPosition3d(Avogadro::Index, const Avogadro::Vector3&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:1207:27,
2026-04-01T12:25:58,946       inlined from ‘void Avogadro::Core::AtomTemplate<Molecule_T>::setPosition3d(const Avogadro::Vector3&) [with Molecule_T = Avogadro::Core::Molecule]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/atom.h:317:32,
2026-04-01T12:25:58,948       inlined from ‘virtual bool Avogadro::Io::TrrFormat::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/trrformat.cpp:241:32:
2026-04-01T12:25:58,949   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:25:58,950    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:25:58,951         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:25:58,952   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:25:58,952       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22,
2026-04-01T12:25:58,953       inlined from ‘virtual bool Avogadro::Io::TrrFormat::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/trrformat.cpp:404:32:
2026-04-01T12:25:58,954   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:25:58,955    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:25:58,956         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:26:17,628   [58/88] /usr/bin/arm-linux-gnueabihf-g++ -DIO_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/io -I/tmp/tmpxp_nina1/build/avogadro/core -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/struct -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/io/CMakeFiles/IO.dir/vaspformat.cpp.o -MF avogadro/io/CMakeFiles/IO.dir/vaspformat.cpp.o.d -o avogadro/io/CMakeFiles/IO.dir/vaspformat.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/vaspformat.cpp
2026-04-01T12:26:17,630   In file included from /usr/include/c++/12/vector:70,
2026-04-01T12:26:17,631                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/fileformat.h:15,
2026-04-01T12:26:17,632                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/vaspformat.h:9,
2026-04-01T12:26:17,633                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/vaspformat.cpp:6:
2026-04-01T12:26:17,634   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double&, double&, double&}; _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:26:17,635   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:26:17,636     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:26:17,637         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:17,638   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:26:17,639   /usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:26:17,640     523 |     vector<_Tp, _Alloc>::
2026-04-01T12:26:17,641         |     ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:17,642   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double&}; _Tp = double; _Alloc = std::allocator<double>]’:
2026-04-01T12:26:17,643   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2026-04-01T12:26:17,644     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:26:17,646         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:17,647   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double&}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:26:17,648       inlined from ‘std::optional<std::vector<T> > Avogadro::Core::lexicalCast(Iterator, Iterator) [with T = double; Iterator = __gnu_cxx::__normal_iterator<std::__cxx11::basic_string<char>*, std::vector<std::__cxx11::basic_string<char> > >]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/utilities.h:152:26:
2026-04-01T12:26:17,649   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:26:17,650     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:26:17,652         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:17,653   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const Eigen::Matrix<double, 3, 1, 0, 3, 1>&}; _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:26:17,654   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:26:17,655     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:26:17,656         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:17,658   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double&, double&, double&}; _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:26:17,659       inlined from ‘virtual bool Avogadro::Io::PoscarFormat::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/vaspformat.cpp:196:27:
2026-04-01T12:26:17,660   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:26:17,661     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:26:17,662         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:17,664   In file included from /usr/include/c++/12/vector:64:
2026-04-01T12:26:17,665   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:26:17,666       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:26:17,667       inlined from ‘bool Avogadro::Core::Molecule::setAtomPosition3d(Avogadro::Index, const Avogadro::Vector3&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:1207:27,
2026-04-01T12:26:17,668       inlined from ‘void Avogadro::Core::AtomTemplate<Molecule_T>::setPosition3d(const Avogadro::Vector3&) [with Molecule_T = Avogadro::Core::Molecule]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/atom.h:317:32,
2026-04-01T12:26:17,678       inlined from ‘virtual bool Avogadro::Io::PoscarFormat::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/vaspformat.cpp:236:28:
2026-04-01T12:26:17,679   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:26:17,681    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:26:17,682         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:17,682   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:26:17,683       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:26:17,685       inlined from ‘bool Avogadro::Core::Molecule::setAtomPosition3d(Avogadro::Index, const Avogadro::Vector3&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:1207:27,
2026-04-01T12:26:17,685       inlined from ‘void Avogadro::Core::AtomTemplate<Molecule_T>::setPosition3d(const Avogadro::Vector3&) [with Molecule_T = Avogadro::Core::Molecule]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/atom.h:317:32,
2026-04-01T12:26:17,687       inlined from ‘virtual bool Avogadro::Io::OutcarFormat::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/vaspformat.cpp:533:34:
2026-04-01T12:26:17,688   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:26:17,689    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:26:17,690         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:17,692   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:26:17,698       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22,
2026-04-01T12:26:17,699       inlined from ‘virtual bool Avogadro::Io::OutcarFormat::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/vaspformat.cpp:536:32:
2026-04-01T12:26:17,703   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:26:17,705    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:26:17,706         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:26:29,083   [59/88] /usr/bin/arm-linux-gnueabihf-g++ -DIO_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/io -I/tmp/tmpxp_nina1/build/avogadro/core -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/struct -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/io/CMakeFiles/IO.dir/turbomoleformat.cpp.o -MF avogadro/io/CMakeFiles/IO.dir/turbomoleformat.cpp.o.d -o avogadro/io/CMakeFiles/IO.dir/turbomoleformat.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/turbomoleformat.cpp
2026-04-01T12:26:29,084   In file included from /usr/include/c++/12/vector:70,
2026-04-01T12:26:29,084                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/fileformat.h:15,
2026-04-01T12:26:29,085                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/turbomoleformat.h:9,
2026-04-01T12:26:29,086                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/turbomoleformat.cpp:6:
2026-04-01T12:26:29,087   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:26:29,088   /usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:26:29,089     523 |     vector<_Tp, _Alloc>::
2026-04-01T12:26:29,090         |     ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:29,091   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double&}; _Tp = double; _Alloc = std::allocator<double>]’:
2026-04-01T12:26:29,092   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2026-04-01T12:26:29,093     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:26:29,094         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:29,095   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double&}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:26:29,096       inlined from ‘std::optional<std::vector<T> > Avogadro::Core::lexicalCast(Iterator, Iterator) [with T = double; Iterator = __gnu_cxx::__normal_iterator<std::__cxx11::basic_string<char>*, std::vector<std::__cxx11::basic_string<char> > >]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/utilities.h:152:26:
2026-04-01T12:26:29,097   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:26:29,098     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:26:29,099         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:29,100   In file included from /usr/include/c++/12/set:60,
2026-04-01T12:26:29,101                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/graph.h:13,
2026-04-01T12:26:29,102                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:17,
2026-04-01T12:26:29,102                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/turbomoleformat.cpp:9:
2026-04-01T12:26:29,103   /usr/include/c++/12/bits/stl_tree.h: In member function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’:
2026-04-01T12:26:29,104   /usr/include/c++/12/bits/stl_tree.h:2209:5: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:26:29,105    2209 |     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
2026-04-01T12:26:29,106         |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:29,107   /usr/include/c++/12/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, nlohmann::json_abi_v3_11_3::basic_json<std::map, std::vector, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::json_abi_v3_11_3::adl_serializer, std::vector<unsigned char, std::allocator<unsigned char> >, void>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’:
2026-04-01T12:26:29,108   /usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:26:29,109    2457 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
2026-04-01T12:26:29,110         |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:29,111   /usr/include/c++/12/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’:
2026-04-01T12:26:29,112   /usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:26:29,112   In file included from /usr/include/c++/12/map:61,
2026-04-01T12:26:29,118                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/variantmap.h:13,
2026-04-01T12:26:29,128                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:19:
2026-04-01T12:26:29,129   In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::iterator std::map<_Key, _Tp, _Compare, _Alloc>::emplace_hint(const_iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, nlohmann::json_abi_v3_11_3::basic_json<std::map, std::vector, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::json_abi_v3_11_3::adl_serializer, std::vector<unsigned char, std::allocator<unsigned char> >, void>}; _Key = std::__cxx11::basic_string<char>; _Tp = nlohmann::json_abi_v3_11_3::basic_json<>; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’,
2026-04-01T12:26:29,130       inlined from ‘std::pair<typename std::_Rb_tree<_Key, std::pair<const _Key, _Val>, std::_Select1st<std::pair<const _Key, _Val> >, _Compare, typename __gnu_cxx::__alloc_traits<_Allocator>::rebind<std::pair<const _Key, _Val> >::other>::iterator, bool> std::map<_Key, _Tp, _Compare, _Alloc>::emplace(_Args&& ...) [with _Args = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, nlohmann::json_abi_v3_11_3::basic_json<std::map, std::vector, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::json_abi_v3_11_3::adl_serializer, std::vector<unsigned char, std::allocator<unsigned char> >, void>}; _Key = std::__cxx11::basic_string<char>; _Tp = nlohmann::json_abi_v3_11_3::basic_json<>; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’ at /usr/include/c++/12/bits/stl_map.h:599:22,
2026-04-01T12:26:29,131       inlined from ‘nlohmann::json_abi_v3_11_3::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer, BinaryType, CustomBaseClass>::basic_json(initializer_list_t, bool, value_t) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::json_abi_v3_11_3::adl_serializer; BinaryType = std::vector<unsigned char, std::allocator<unsigned char> >; CustomBaseClass = void]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/nlohmann/json.hpp:942:47:
2026-04-01T12:26:29,132   /usr/include/c++/12/bits/stl_map.h:638:45: note: parameter passing for argument of type ‘std::map<std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<>, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ {aka ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’} changed in GCC 7.1
2026-04-01T12:26:29,133     638 |           return _M_t._M_emplace_hint_unique(__pos,
2026-04-01T12:26:29,134         |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~
2026-04-01T12:26:29,134     639 |                                              std::forward<_Args>(__args)...);
2026-04-01T12:26:29,135         |                                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:29,136   In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Tp = nlohmann::json_abi_v3_11_3::basic_json<>; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’,
2026-04-01T12:26:29,137       inlined from ‘bool nlohmann::json_abi_v3_11_3::detail::json_sax_dom_callback_parser<BasicJsonType>::key(string_t&) [with BasicJsonType = nlohmann::json_abi_v3_11_3::basic_json<>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/nlohmann/detail/input/json_sax.hpp:441:83:
2026-04-01T12:26:29,138   /usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:26:29,139     511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
2026-04-01T12:26:29,140         |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:29,141     512 |                                             std::tuple<const key_type&>(__k),
2026-04-01T12:26:29,142         |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:29,142     513 |                                             std::tuple<>());
2026-04-01T12:26:29,143         |                                             ~~~~~~~~~~~~~~~
2026-04-01T12:26:29,144   In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Tp = nlohmann::json_abi_v3_11_3::basic_json<>; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’,
2026-04-01T12:26:29,145       inlined from ‘bool nlohmann::json_abi_v3_11_3::detail::json_sax_dom_parser<BasicJsonType>::key(string_t&) [with BasicJsonType = nlohmann::json_abi_v3_11_3::basic_json<>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/nlohmann/detail/input/json_sax.hpp:246:79,
2026-04-01T12:26:29,146       inlined from ‘bool nlohmann::json_abi_v3_11_3::detail::parser<BasicJsonType, InputAdapterType>::sax_parse_internal(SAX*) [with SAX = nlohmann::json_abi_v3_11_3::detail::json_sax_dom_parser<nlohmann::json_abi_v3_11_3::basic_json<> >; BasicJsonType = nlohmann::json_abi_v3_11_3::basic_json<>; InputAdapterType = nlohmann::json_abi_v3_11_3::detail::iterator_input_adapter<__gnu_cxx::__normal_iterator<const char*, std::__cxx11::basic_string<char> > >]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/nlohmann/detail/input/parser.hpp:219:29:
2026-04-01T12:26:29,147   /usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:26:29,158     511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
2026-04-01T12:26:29,163         |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:29,164     512 |                                             std::tuple<const key_type&>(__k),
2026-04-01T12:26:29,165         |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:29,166     513 |                                             std::tuple<>());
2026-04-01T12:26:29,167         |                                             ~~~~~~~~~~~~~~~
2026-04-01T12:26:29,168   In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Tp = nlohmann::json_abi_v3_11_3::basic_json<>; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’,
2026-04-01T12:26:29,169       inlined from ‘bool nlohmann::json_abi_v3_11_3::detail::json_sax_dom_parser<BasicJsonType>::key(string_t&) [with BasicJsonType = nlohmann::json_abi_v3_11_3::basic_json<>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/nlohmann/detail/input/json_sax.hpp:246:79,
2026-04-01T12:26:29,169       inlined from ‘bool nlohmann::json_abi_v3_11_3::detail::parser<BasicJsonType, InputAdapterType>::sax_parse_internal(SAX*) [with SAX = nlohmann::json_abi_v3_11_3::detail::json_sax_dom_parser<nlohmann::json_abi_v3_11_3::basic_json<> >; BasicJsonType = nlohmann::json_abi_v3_11_3::basic_json<>; InputAdapterType = nlohmann::json_abi_v3_11_3::detail::iterator_input_adapter<__gnu_cxx::__normal_iterator<const char*, std::__cxx11::basic_string<char> > >]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/nlohmann/detail/input/parser.hpp:430:21:
2026-04-01T12:26:29,170   /usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:26:29,172     511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
2026-04-01T12:26:29,173         |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:29,173     512 |                                             std::tuple<const key_type&>(__k),
2026-04-01T12:26:29,174         |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:29,175     513 |                                             std::tuple<>());
2026-04-01T12:26:29,176         |                                             ~~~~~~~~~~~~~~~
2026-04-01T12:26:29,177   In file included from /usr/include/c++/12/vector:64:
2026-04-01T12:26:29,178   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:26:29,179       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:26:29,180       inlined from ‘bool Avogadro::Core::Molecule::setAtomPosition3d(Avogadro::Index, const Avogadro::Vector3&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:1207:27,
2026-04-01T12:26:29,181       inlined from ‘void Avogadro::Core::AtomTemplate<Molecule_T>::setPosition3d(const Avogadro::Vector3&) [with Molecule_T = Avogadro::Core::Molecule]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/atom.h:317:32,
2026-04-01T12:26:29,181       inlined from ‘virtual bool Avogadro::Io::TurbomoleFormat::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/turbomoleformat.cpp:141:30:
2026-04-01T12:26:29,182   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:26:29,183    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:26:29,188         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:29,198   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:26:29,199       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:26:29,200       inlined from ‘bool Avogadro::Core::Molecule::setAtomPosition3d(Avogadro::Index, const Avogadro::Vector3&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:1207:27,
2026-04-01T12:26:29,201       inlined from ‘virtual bool Avogadro::Io::TurbomoleFormat::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/turbomoleformat.cpp:357:28:
2026-04-01T12:26:29,202   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:26:29,203    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:26:29,204         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:30,417   [60/88] /usr/bin/arm-linux-gnueabihf-g++ -DQuantumIO_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/quantumio -I/tmp/tmpxp_nina1/build/avogadro/io -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/quantumio/CMakeFiles/QuantumIO.dir/gamessus.cpp.o -MF avogadro/quantumio/CMakeFiles/QuantumIO.dir/gamessus.cpp.o.d -o avogadro/quantumio/CMakeFiles/QuantumIO.dir/gamessus.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/gamessus.cpp
2026-04-01T12:26:30,418   In file included from /usr/include/c++/12/vector:70,
2026-04-01T12:26:30,419                    from /usr/include/c++/12/functional:62,
2026-04-01T12:26:30,420                    from /usr/include/eigen3/Eigen/Core:85,
2026-04-01T12:26:30,422                    from /usr/include/eigen3/Eigen/Dense:1,
2026-04-01T12:26:30,423                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/matrix.h:10,
2026-04-01T12:26:30,424                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/variant.h:12,
2026-04-01T12:26:30,425                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/basisset.h:10,
2026-04-01T12:26:30,426                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/gaussianset.h:11,
2026-04-01T12:26:30,428                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/gamessus.h:10,
2026-04-01T12:26:30,429                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/gamessus.cpp:6:
2026-04-01T12:26:30,430   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]’:
2026-04-01T12:26:30,430   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2026-04-01T12:26:30,431     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:26:30,432         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:30,433   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:26:30,434   /usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:26:30,435     523 |     vector<_Tp, _Alloc>::
2026-04-01T12:26:30,436         |     ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:30,437   In file included from /usr/include/c++/12/vector:64:
2026-04-01T12:26:30,438   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:26:30,439       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:26:30,440       inlined from ‘bool Avogadro::Core::Molecule::setAtomPosition3d(Avogadro::Index, const Avogadro::Vector3&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:1207:27,
2026-04-01T12:26:30,442       inlined from ‘void Avogadro::Core::AtomTemplate<Molecule_T>::setPosition3d(const Avogadro::Vector3&) [with Molecule_T = Avogadro::Core::Molecule]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/atom.h:317:32,
2026-04-01T12:26:30,443       inlined from ‘void Avogadro::QuantumIO::GAMESSUSOutput::readAtomBlock(std::istream&, Avogadro::Core::Molecule&, bool)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/gamessus.cpp:143:25:
2026-04-01T12:26:30,444   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:26:30,446    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:26:30,447         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:30,448   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’:
2026-04-01T12:26:30,449   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2026-04-01T12:26:30,450     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:26:30,451         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:30,451   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:26:30,465       inlined from ‘void Avogadro::QuantumIO::GAMESSUSOutput::readEigenvectors(std::istream&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/gamessus.cpp:239:33:
2026-04-01T12:26:30,467   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:26:30,468    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:26:30,469         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:26:30,470   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:26:30,470       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:26:30,471       inlined from ‘void Avogadro::QuantumIO::GAMESSUSOutput::readEigenvectors(std::istream&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/gamessus.cpp:246:34:
2026-04-01T12:26:30,472   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:26:30,473     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:26:30,474         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:30,475   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:26:30,476       inlined from ‘void Avogadro::QuantumIO::GAMESSUSOutput::readEigenvectors(std::istream&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/gamessus.cpp:261:27:
2026-04-01T12:26:30,477   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:26:30,478    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:26:30,479         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:26:30,479   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:26:30,480       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:26:30,482       inlined from ‘void Avogadro::QuantumIO::GAMESSUSOutput::readBasisSet(std::istream&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/gamessus.cpp:204:22:
2026-04-01T12:26:30,483   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:26:30,484     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:26:30,486         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:30,487   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:26:30,488       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:26:30,489       inlined from ‘void Avogadro::QuantumIO::GAMESSUSOutput::readBasisSet(std::istream&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/gamessus.cpp:205:22:
2026-04-01T12:26:30,490   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:26:30,492     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:26:30,493         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:30,508   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:26:30,509       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:26:30,510       inlined from ‘void Avogadro::QuantumIO::GAMESSUSOutput::readBasisSet(std::istream&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/gamessus.cpp:207:26:
2026-04-01T12:26:30,511   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:26:30,512     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:26:30,513         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:38,204   [61/88] /usr/bin/arm-linux-gnueabihf-g++ -DIO_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/io -I/tmp/tmpxp_nina1/build/avogadro/core -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/struct -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/io/CMakeFiles/IO.dir/xyzformat.cpp.o -MF avogadro/io/CMakeFiles/IO.dir/xyzformat.cpp.o.d -o avogadro/io/CMakeFiles/IO.dir/xyzformat.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/xyzformat.cpp
2026-04-01T12:26:38,205   In file included from /usr/include/c++/12/vector:70,
2026-04-01T12:26:38,206                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/fileformat.h:15,
2026-04-01T12:26:38,207                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/xyzformat.h:9,
2026-04-01T12:26:38,208                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/xyzformat.cpp:6:
2026-04-01T12:26:38,209   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]’:
2026-04-01T12:26:38,210   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2026-04-01T12:26:38,211     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:26:38,212         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:38,213   In file included from /usr/include/c++/12/vector:64:
2026-04-01T12:26:38,214   /usr/include/c++/12/bits/stl_vector.h: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’:
2026-04-01T12:26:38,215   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:26:38,216    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:26:38,217         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:26:38,218   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:26:38,219   /usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:26:38,220     523 |     vector<_Tp, _Alloc>::
2026-04-01T12:26:38,221         |     ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:38,222   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double&}; _Tp = double; _Alloc = std::allocator<double>]’:
2026-04-01T12:26:38,223   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2026-04-01T12:26:38,228     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:26:38,238         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:38,239   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double&}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:26:38,240       inlined from ‘std::optional<std::vector<T> > Avogadro::Core::lexicalCast(Iterator, Iterator) [with T = double; Iterator = __gnu_cxx::__normal_iterator<std::__cxx11::basic_string<char>*, std::vector<std::__cxx11::basic_string<char> > >]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/utilities.h:152:26:
2026-04-01T12:26:38,241   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:26:38,242     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:26:38,243         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:38,244   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const Eigen::Matrix<double, 3, 1, 0, 3, 1>&}; _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:26:38,245   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:26:38,246     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:26:38,248         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:38,249   In file included from /usr/include/c++/12/set:60,
2026-04-01T12:26:38,250                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/graph.h:13,
2026-04-01T12:26:38,251                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:17,
2026-04-01T12:26:38,252                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/xyzformat.cpp:9:
2026-04-01T12:26:38,254   /usr/include/c++/12/bits/stl_tree.h: In member function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’:
2026-04-01T12:26:38,255   /usr/include/c++/12/bits/stl_tree.h:2209:5: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:26:38,256    2209 |     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
2026-04-01T12:26:38,257         |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:38,258   /usr/include/c++/12/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, nlohmann::json_abi_v3_11_3::basic_json<std::map, std::vector, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::json_abi_v3_11_3::adl_serializer, std::vector<unsigned char, std::allocator<unsigned char> >, void>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’:
2026-04-01T12:26:38,259   /usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:26:38,259    2457 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
2026-04-01T12:26:38,261         |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:38,262   /usr/include/c++/12/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’:
2026-04-01T12:26:38,262   /usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:26:38,264   In file included from /usr/include/c++/12/map:61,
2026-04-01T12:26:38,265                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/variantmap.h:13,
2026-04-01T12:26:38,265                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:19:
2026-04-01T12:26:38,266   In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::iterator std::map<_Key, _Tp, _Compare, _Alloc>::emplace_hint(const_iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, nlohmann::json_abi_v3_11_3::basic_json<std::map, std::vector, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::json_abi_v3_11_3::adl_serializer, std::vector<unsigned char, std::allocator<unsigned char> >, void>}; _Key = std::__cxx11::basic_string<char>; _Tp = nlohmann::json_abi_v3_11_3::basic_json<>; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’,
2026-04-01T12:26:38,267       inlined from ‘std::pair<typename std::_Rb_tree<_Key, std::pair<const _Key, _Val>, std::_Select1st<std::pair<const _Key, _Val> >, _Compare, typename __gnu_cxx::__alloc_traits<_Allocator>::rebind<std::pair<const _Key, _Val> >::other>::iterator, bool> std::map<_Key, _Tp, _Compare, _Alloc>::emplace(_Args&& ...) [with _Args = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, nlohmann::json_abi_v3_11_3::basic_json<std::map, std::vector, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::json_abi_v3_11_3::adl_serializer, std::vector<unsigned char, std::allocator<unsigned char> >, void>}; _Key = std::__cxx11::basic_string<char>; _Tp = nlohmann::json_abi_v3_11_3::basic_json<>; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’ at /usr/include/c++/12/bits/stl_map.h:599:22,
2026-04-01T12:26:38,268       inlined from ‘nlohmann::json_abi_v3_11_3::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer, BinaryType, CustomBaseClass>::basic_json(initializer_list_t, bool, value_t) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::json_abi_v3_11_3::adl_serializer; BinaryType = std::vector<unsigned char, std::allocator<unsigned char> >; CustomBaseClass = void]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/nlohmann/json.hpp:942:47:
2026-04-01T12:26:38,270   /usr/include/c++/12/bits/stl_map.h:638:45: note: parameter passing for argument of type ‘std::map<std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<>, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ {aka ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’} changed in GCC 7.1
2026-04-01T12:26:38,271     638 |           return _M_t._M_emplace_hint_unique(__pos,
2026-04-01T12:26:38,273         |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~
2026-04-01T12:26:38,273     639 |                                              std::forward<_Args>(__args)...);
2026-04-01T12:26:38,274         |                                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:38,275   In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Tp = nlohmann::json_abi_v3_11_3::basic_json<>; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’,
2026-04-01T12:26:38,276       inlined from ‘bool nlohmann::json_abi_v3_11_3::detail::json_sax_dom_callback_parser<BasicJsonType>::key(string_t&) [with BasicJsonType = nlohmann::json_abi_v3_11_3::basic_json<>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/nlohmann/detail/input/json_sax.hpp:441:83:
2026-04-01T12:26:38,277   /usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:26:38,278     511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
2026-04-01T12:26:38,279         |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:38,280     512 |                                             std::tuple<const key_type&>(__k),
2026-04-01T12:26:38,281         |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:38,281     513 |                                             std::tuple<>());
2026-04-01T12:26:38,282         |                                             ~~~~~~~~~~~~~~~
2026-04-01T12:26:38,284   In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Tp = nlohmann::json_abi_v3_11_3::basic_json<>; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’,
2026-04-01T12:26:38,285       inlined from ‘bool nlohmann::json_abi_v3_11_3::detail::json_sax_dom_parser<BasicJsonType>::key(string_t&) [with BasicJsonType = nlohmann::json_abi_v3_11_3::basic_json<>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/nlohmann/detail/input/json_sax.hpp:246:79,
2026-04-01T12:26:38,286       inlined from ‘bool nlohmann::json_abi_v3_11_3::detail::parser<BasicJsonType, InputAdapterType>::sax_parse_internal(SAX*) [with SAX = nlohmann::json_abi_v3_11_3::detail::json_sax_dom_parser<nlohmann::json_abi_v3_11_3::basic_json<> >; BasicJsonType = nlohmann::json_abi_v3_11_3::basic_json<>; InputAdapterType = nlohmann::json_abi_v3_11_3::detail::iterator_input_adapter<__gnu_cxx::__normal_iterator<const char*, std::__cxx11::basic_string<char> > >]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/nlohmann/detail/input/parser.hpp:219:29:
2026-04-01T12:26:38,287   /usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:26:38,288     511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
2026-04-01T12:26:38,298         |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:38,299     512 |                                             std::tuple<const key_type&>(__k),
2026-04-01T12:26:38,300         |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:38,301     513 |                                             std::tuple<>());
2026-04-01T12:26:38,302         |                                             ~~~~~~~~~~~~~~~
2026-04-01T12:26:38,303   In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Tp = nlohmann::json_abi_v3_11_3::basic_json<>; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’,
2026-04-01T12:26:38,304       inlined from ‘bool nlohmann::json_abi_v3_11_3::detail::json_sax_dom_parser<BasicJsonType>::key(string_t&) [with BasicJsonType = nlohmann::json_abi_v3_11_3::basic_json<>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/nlohmann/detail/input/json_sax.hpp:246:79,
2026-04-01T12:26:38,305       inlined from ‘bool nlohmann::json_abi_v3_11_3::detail::parser<BasicJsonType, InputAdapterType>::sax_parse_internal(SAX*) [with SAX = nlohmann::json_abi_v3_11_3::detail::json_sax_dom_parser<nlohmann::json_abi_v3_11_3::basic_json<> >; BasicJsonType = nlohmann::json_abi_v3_11_3::basic_json<>; InputAdapterType = nlohmann::json_abi_v3_11_3::detail::iterator_input_adapter<__gnu_cxx::__normal_iterator<const char*, std::__cxx11::basic_string<char> > >]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/nlohmann/detail/input/parser.hpp:430:21:
2026-04-01T12:26:38,306   /usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:26:38,307     511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
2026-04-01T12:26:38,308         |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:38,310     512 |                                             std::tuple<const key_type&>(__k),
2026-04-01T12:26:38,311         |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:38,313     513 |                                             std::tuple<>());
2026-04-01T12:26:38,314         |                                             ~~~~~~~~~~~~~~~
2026-04-01T12:26:38,315   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:26:38,316       inlined from ‘virtual bool Avogadro::Io::XyzFormat::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/xyzformat.cpp:104:23:
2026-04-01T12:26:38,317   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:26:38,319    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:26:38,320         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:26:38,320   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:26:38,321       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:26:38,322       inlined from ‘bool Avogadro::Core::Molecule::setAtomPosition3d(Avogadro::Index, const Avogadro::Vector3&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:1207:27,
2026-04-01T12:26:38,323       inlined from ‘void Avogadro::Core::AtomTemplate<Molecule_T>::setPosition3d(const Avogadro::Vector3&) [with Molecule_T = Avogadro::Core::Molecule]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/atom.h:317:32,
2026-04-01T12:26:38,324       inlined from ‘virtual bool Avogadro::Io::XyzFormat::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/xyzformat.cpp:232:26:
2026-04-01T12:26:38,325   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:26:38,326    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:26:38,338         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:38,339   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:26:38,340       inlined from ‘virtual bool Avogadro::Io::XyzFormat::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/xyzformat.cpp:237:26:
2026-04-01T12:26:38,341   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:26:38,342    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:26:38,344         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:26:38,345   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:26:38,347       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:26:38,348       inlined from ‘bool Avogadro::Core::Molecule::setForceVector(Avogadro::Index, const Avogadro::Vector3&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:1280:28,
2026-04-01T12:26:38,349       inlined from ‘void Avogadro::Core::AtomTemplate<Molecule_T>::setForceVector(const Avogadro::Vector3&) [with Molecule_T = Avogadro::Core::Molecule]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/atom.h:403:29,
2026-04-01T12:26:38,350       inlined from ‘virtual bool Avogadro::Io::XyzFormat::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/xyzformat.cpp:247:31:
2026-04-01T12:26:38,351   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:26:38,352    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:26:38,353         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:38,354   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:26:38,355       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22,
2026-04-01T12:26:38,356       inlined from ‘virtual bool Avogadro::Io::XyzFormat::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/xyzformat.cpp:304:30:
2026-04-01T12:26:38,357   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:26:38,358    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:26:38,359         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:26:51,951   [62/88] /usr/bin/arm-linux-gnueabihf-g++ -DQuantumIO_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/quantumio -I/tmp/tmpxp_nina1/build/avogadro/io -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/quantumio/CMakeFiles/QuantumIO.dir/gaussianfchk.cpp.o -MF avogadro/quantumio/CMakeFiles/QuantumIO.dir/gaussianfchk.cpp.o.d -o avogadro/quantumio/CMakeFiles/QuantumIO.dir/gaussianfchk.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/gaussianfchk.cpp
2026-04-01T12:26:51,952   In file included from /usr/include/c++/12/vector:70,
2026-04-01T12:26:51,953                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:12,
2026-04-01T12:26:51,954                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/gaussianfchk.h:11,
2026-04-01T12:26:51,956                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/gaussianfchk.cpp:6:
2026-04-01T12:26:51,957   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:26:51,958   /usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:26:51,959     523 |     vector<_Tp, _Alloc>::
2026-04-01T12:26:51,960         |     ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:51,962   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]’:
2026-04-01T12:26:51,963   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2026-04-01T12:26:51,964     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:26:51,965         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:51,967   In file included from /usr/include/c++/12/vector:64:
2026-04-01T12:26:51,969   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:26:51,970       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = double]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22:
2026-04-01T12:26:51,971   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:26:51,972    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:26:51,973         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:26:51,974   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const Eigen::Matrix<double, 3, 1, 0, 3, 1>&}; _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:26:51,975   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:26:51,977     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:26:51,978         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:51,979   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:26:51,980       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22:
2026-04-01T12:26:51,982   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:26:51,983    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:26:51,988         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:26:51,990   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’:
2026-04-01T12:26:51,991   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2026-04-01T12:26:51,992     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:26:51,994         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:51,995   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:26:51,997       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:26:51,999       inlined from ‘std::vector<double> Avogadro::QuantumIO::GaussianFchk::readArrayD(std::istream&, unsigned int, int, double)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/gaussianfchk.cpp:571:22:
2026-04-01T12:26:52,001   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:26:52,003     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:26:52,008         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:52,010   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:26:52,014       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:26:52,015       inlined from ‘std::vector<double> Avogadro::QuantumIO::GaussianFchk::readArrayD(std::istream&, unsigned int, int, double)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/gaussianfchk.cpp:589:22:
2026-04-01T12:26:52,017   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:26:52,018     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:26:52,028         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:52,029   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:26:52,030       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:26:52,031       inlined from ‘bool Avogadro::Core::Molecule::setAtomPosition3d(Avogadro::Index, const Avogadro::Vector3&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:1207:27,
2026-04-01T12:26:52,032       inlined from ‘void Avogadro::Core::AtomTemplate<Molecule_T>::setPosition3d(const Avogadro::Vector3&) [with Molecule_T = Avogadro::Core::Molecule]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/atom.h:317:32,
2026-04-01T12:26:52,033       inlined from ‘virtual bool Avogadro::QuantumIO::GaussianFchk::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/gaussianfchk.cpp:101:20:
2026-04-01T12:26:52,034   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:26:52,035    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:26:52,036         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:52,965   [63/88] /usr/bin/arm-linux-gnueabihf-g++ -DQuantumIO_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/quantumio -I/tmp/tmpxp_nina1/build/avogadro/io -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/quantumio/CMakeFiles/QuantumIO.dir/genericoutput.cpp.o -MF avogadro/quantumio/CMakeFiles/QuantumIO.dir/genericoutput.cpp.o.d -o avogadro/quantumio/CMakeFiles/QuantumIO.dir/genericoutput.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/genericoutput.cpp
2026-04-01T12:26:54,727   [64/88] /usr/bin/arm-linux-gnueabihf-g++ -DQuantumIO_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/quantumio -I/tmp/tmpxp_nina1/build/avogadro/io -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/quantumio/CMakeFiles/QuantumIO.dir/gaussiancube.cpp.o -MF avogadro/quantumio/CMakeFiles/QuantumIO.dir/gaussiancube.cpp.o.d -o avogadro/quantumio/CMakeFiles/QuantumIO.dir/gaussiancube.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/gaussiancube.cpp
2026-04-01T12:26:54,728   In file included from /usr/include/c++/12/vector:70,
2026-04-01T12:26:54,730                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/fileformat.h:15,
2026-04-01T12:26:54,731                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/gaussiancube.h:10,
2026-04-01T12:26:54,732                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/gaussiancube.cpp:6:
2026-04-01T12:26:54,733   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:26:54,734   /usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:26:54,735     523 |     vector<_Tp, _Alloc>::
2026-04-01T12:26:54,736         |     ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:54,737   In file included from /usr/include/c++/12/vector:64:
2026-04-01T12:26:54,738   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:26:54,739       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:26:54,740       inlined from ‘bool Avogadro::Core::Molecule::setAtomPosition3d(Avogadro::Index, const Avogadro::Vector3&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:1207:27,
2026-04-01T12:26:54,741       inlined from ‘void Avogadro::Core::AtomTemplate<Molecule_T>::setPosition3d(const Avogadro::Vector3&) [with Molecule_T = Avogadro::Core::Molecule]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/atom.h:317:32,
2026-04-01T12:26:54,742       inlined from ‘virtual bool Avogadro::QuantumIO::GaussianCube::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/gaussiancube.cpp:172:20:
2026-04-01T12:26:54,743   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:26:54,745    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:26:54,746         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:57,849   [65/88] /usr/bin/arm-linux-gnueabihf-g++ -DIO_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/io -I/tmp/tmpxp_nina1/build/avogadro/core -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/struct -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/io/CMakeFiles/IO.dir/cjsonformat.cpp.o -MF avogadro/io/CMakeFiles/IO.dir/cjsonformat.cpp.o.d -o avogadro/io/CMakeFiles/IO.dir/cjsonformat.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/cjsonformat.cpp
2026-04-01T12:26:57,850   In file included from /usr/include/c++/12/vector:70,
2026-04-01T12:26:57,852                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/fileformat.h:15,
2026-04-01T12:26:57,853                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/cjsonformat.h:9,
2026-04-01T12:26:57,854                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/cjsonformat.cpp:6:
2026-04-01T12:26:57,855   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:26:57,856   /usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:26:57,857     523 |     vector<_Tp, _Alloc>::
2026-04-01T12:26:57,858         |     ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:57,859   In file included from /usr/include/c++/12/vector:64:
2026-04-01T12:26:57,860   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:26:57,861       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:26:57,862       inlined from ‘bool Avogadro::Core::Molecule::setAtomPosition3d(Avogadro::Index, const Avogadro::Vector3&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:1207:27:
2026-04-01T12:26:57,863   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:26:57,864    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:26:57,865         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:57,866   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const Eigen::Matrix<double, 3, 1, 0, 3, 1>&}; _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:26:57,867   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:26:57,869     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:26:57,871         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:57,872   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:26:57,873       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22:
2026-04-01T12:26:57,874   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:26:57,876    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:26:57,877         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:26:57,878   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’:
2026-04-01T12:26:57,879   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2026-04-01T12:26:57,880     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:26:57,880         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:57,882   /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’:
2026-04-01T12:26:57,898   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:26:57,899     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:26:57,900         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:57,901   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]’:
2026-04-01T12:26:57,902   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2026-04-01T12:26:57,904     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:26:57,905         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:57,906   In file included from /usr/include/c++/12/map:60,
2026-04-01T12:26:57,907                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/layermanager.h:15,
2026-04-01T12:26:57,908                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/cjsonformat.cpp:12:
2026-04-01T12:26:57,909   /usr/include/c++/12/bits/stl_tree.h: In member function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’:
2026-04-01T12:26:57,910   /usr/include/c++/12/bits/stl_tree.h:2209:5: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:26:57,911    2209 |     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
2026-04-01T12:26:57,912         |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:57,913   /usr/include/c++/12/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’:
2026-04-01T12:26:57,914   /usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:26:57,915    2457 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
2026-04-01T12:26:57,916         |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:57,917   In file included from /usr/include/c++/12/map:61:
2026-04-01T12:26:57,918   /usr/include/c++/12/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Tp = nlohmann::json_abi_v3_11_3::basic_json<>; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’:
2026-04-01T12:26:57,919   /usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:26:57,920     511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
2026-04-01T12:26:57,921         |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:57,922     512 |                                             std::tuple<const key_type&>(__k),
2026-04-01T12:26:57,923         |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:57,924     513 |                                             std::tuple<>());
2026-04-01T12:26:57,925         |                                             ~~~~~~~~~~~~~~~
2026-04-01T12:26:57,926   In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Tp = nlohmann::json_abi_v3_11_3::basic_json<>; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’,
2026-04-01T12:26:57,928       inlined from ‘bool nlohmann::json_abi_v3_11_3::detail::json_sax_dom_parser<BasicJsonType>::key(string_t&) [with BasicJsonType = nlohmann::json_abi_v3_11_3::basic_json<>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/nlohmann/detail/input/json_sax.hpp:246:79,
2026-04-01T12:26:57,929       inlined from ‘bool nlohmann::json_abi_v3_11_3::detail::binary_reader<BasicJsonType, InputAdapterType, SAX>::get_msgpack_object(std::size_t) [with BasicJsonType = nlohmann::json_abi_v3_11_3::basic_json<>; InputAdapterType = nlohmann::json_abi_v3_11_3::detail::input_stream_adapter; SAX = nlohmann::json_abi_v3_11_3::detail::json_sax_dom_parser<nlohmann::json_abi_v3_11_3::basic_json<> >]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/nlohmann/detail/input/binary_reader.hpp:1803:17:
2026-04-01T12:26:57,930   /usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:26:57,931     511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
2026-04-01T12:26:57,933         |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:57,948     512 |                                             std::tuple<const key_type&>(__k),
2026-04-01T12:26:57,949         |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:57,950     513 |                                             std::tuple<>());
2026-04-01T12:26:57,951         |                                             ~~~~~~~~~~~~~~~
2026-04-01T12:26:57,952   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:26:57,953       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:26:57,954       inlined from ‘bool Avogadro::Core::Molecule::setForceVector(Avogadro::Index, const Avogadro::Vector3&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:1280:28,
2026-04-01T12:26:57,955       inlined from ‘void Avogadro::Core::AtomTemplate<Molecule_T>::setForceVector(const Avogadro::Vector3&) [with Molecule_T = Avogadro::Core::Molecule]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/atom.h:403:29,
2026-04-01T12:26:57,956       inlined from ‘bool Avogadro::Io::CjsonFormat::deserialize(std::istream&, Avogadro::Core::Molecule&, bool)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/cjsonformat.cpp:286:25:
2026-04-01T12:26:57,957   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:26:57,958    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:26:57,960         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:26:57,962   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:26:57,963       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = double]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22,
2026-04-01T12:26:57,964       inlined from ‘bool Avogadro::Io::CjsonFormat::deserialize(std::istream&, Avogadro::Core::Molecule&, bool)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/cjsonformat.cpp:772:24:
2026-04-01T12:26:57,965   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:26:57,966    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:26:57,968         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:26:57,969   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:26:57,969       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = double]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22,
2026-04-01T12:26:57,971       inlined from ‘bool Avogadro::Io::CjsonFormat::deserialize(std::istream&, Avogadro::Core::Molecule&, bool)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/cjsonformat.cpp:780:25:
2026-04-01T12:26:57,972   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:26:57,973    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:26:57,974         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:26:57,975   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:26:57,976       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = double]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22,
2026-04-01T12:26:57,977       inlined from ‘bool Avogadro::Io::CjsonFormat::deserialize(std::istream&, Avogadro::Core::Molecule&, bool)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/cjsonformat.cpp:788:25:
2026-04-01T12:26:57,979   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:26:57,980    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:26:57,981         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:26:57,982   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:26:57,984       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:26:57,985       inlined from ‘bool Avogadro::Io::CjsonFormat::deserialize(std::istream&, Avogadro::Core::Molecule&, bool)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/cjsonformat.cpp:798:22:
2026-04-01T12:26:57,986   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:26:57,988    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:26:57,989         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:27:04,915   [66/88] /usr/bin/arm-linux-gnueabihf-g++ -DQuantumIO_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/quantumio -I/tmp/tmpxp_nina1/build/avogadro/io -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/quantumio/CMakeFiles/QuantumIO.dir/genericjson.cpp.o -MF avogadro/quantumio/CMakeFiles/QuantumIO.dir/genericjson.cpp.o.d -o avogadro/quantumio/CMakeFiles/QuantumIO.dir/genericjson.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/genericjson.cpp
2026-04-01T12:27:04,916   In file included from /usr/include/c++/12/map:60,
2026-04-01T12:27:04,917                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/genericjson.h:12,
2026-04-01T12:27:04,918                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/genericjson.cpp:6:
2026-04-01T12:27:04,920   /usr/include/c++/12/bits/stl_tree.h: In member function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’:
2026-04-01T12:27:04,922   /usr/include/c++/12/bits/stl_tree.h:2209:5: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:27:04,922    2209 |     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
2026-04-01T12:27:04,923         |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:27:04,924   /usr/include/c++/12/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::nullptr_t}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’:
2026-04-01T12:27:04,925   /usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:27:04,926    2457 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
2026-04-01T12:27:04,927         |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:27:04,928   In file included from /usr/include/c++/12/map:61:
2026-04-01T12:27:04,929   In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::iterator std::map<_Key, _Tp, _Compare, _Alloc>::emplace_hint(const_iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::nullptr_t}; _Key = std::__cxx11::basic_string<char>; _Tp = nlohmann::json_abi_v3_11_3::basic_json<>; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’,
2026-04-01T12:27:04,930       inlined from ‘std::pair<typename std::_Rb_tree<_Key, std::pair<const _Key, _Tp>, std::_Select1st<std::pair<const _Key, _Tp> >, _Compare, typename __gnu_cxx::__alloc_traits<_Allocator>::rebind<std::pair<const _Key, _Tp> >::other>::iterator, bool> std::map<_Key, _Tp, _Compare, _Alloc>::emplace(_Args&& ...) [with _Args = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::nullptr_t}; _Key = std::__cxx11::basic_string<char>; _Tp = nlohmann::json_abi_v3_11_3::basic_json<>; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’ at /usr/include/c++/12/bits/stl_map.h:599:22,
2026-04-01T12:27:04,931       inlined from ‘nlohmann::json_abi_v3_11_3::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer, BinaryType, CustomBaseClass>::value_type& nlohmann::json_abi_v3_11_3::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer, BinaryType, CustomBaseClass>::operator[](typename object_t::key_type) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::json_abi_v3_11_3::adl_serializer; BinaryType = std::vector<unsigned char>; CustomBaseClass = void]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/nlohmann/json.hpp:2132:57:
2026-04-01T12:27:04,932   /usr/include/c++/12/bits/stl_map.h:638:45: note: parameter passing for argument of type ‘std::map<std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<>, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ {aka ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’} changed in GCC 7.1
2026-04-01T12:27:04,934     638 |           return _M_t._M_emplace_hint_unique(__pos,
2026-04-01T12:27:04,935         |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~
2026-04-01T12:27:04,936     639 |                                              std::forward<_Args>(__args)...);
2026-04-01T12:27:04,937         |                                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:27:04,938   /usr/include/c++/12/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’:
2026-04-01T12:27:04,939   /usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:27:04,940    2457 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
2026-04-01T12:27:04,941         |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:27:04,942   In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Tp = nlohmann::json_abi_v3_11_3::basic_json<>; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’,
2026-04-01T12:27:04,944       inlined from ‘bool nlohmann::json_abi_v3_11_3::detail::json_sax_dom_callback_parser<BasicJsonType>::key(string_t&) [with BasicJsonType = nlohmann::json_abi_v3_11_3::basic_json<>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/nlohmann/detail/input/json_sax.hpp:441:83:
2026-04-01T12:27:04,945   /usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:27:04,947     511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
2026-04-01T12:27:04,958         |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:27:04,959     512 |                                             std::tuple<const key_type&>(__k),
2026-04-01T12:27:04,960         |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:27:04,961     513 |                                             std::tuple<>());
2026-04-01T12:27:04,962         |                                             ~~~~~~~~~~~~~~~
2026-04-01T12:27:04,963   In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Tp = nlohmann::json_abi_v3_11_3::basic_json<>; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’,
2026-04-01T12:27:04,964       inlined from ‘bool nlohmann::json_abi_v3_11_3::detail::json_sax_dom_parser<BasicJsonType>::key(string_t&) [with BasicJsonType = nlohmann::json_abi_v3_11_3::basic_json<>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/nlohmann/detail/input/json_sax.hpp:246:79,
2026-04-01T12:27:04,978       inlined from ‘bool nlohmann::json_abi_v3_11_3::detail::parser<BasicJsonType, InputAdapterType>::sax_parse_internal(SAX*) [with SAX = nlohmann::json_abi_v3_11_3::detail::json_sax_dom_parser<nlohmann::json_abi_v3_11_3::basic_json<> >; BasicJsonType = nlohmann::json_abi_v3_11_3::basic_json<>; InputAdapterType = nlohmann::json_abi_v3_11_3::detail::input_stream_adapter]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/nlohmann/detail/input/parser.hpp:219:29:
2026-04-01T12:27:04,979   /usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:27:04,981     511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
2026-04-01T12:27:04,982         |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:27:04,983     512 |                                             std::tuple<const key_type&>(__k),
2026-04-01T12:27:04,984         |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:27:04,985     513 |                                             std::tuple<>());
2026-04-01T12:27:04,987         |                                             ~~~~~~~~~~~~~~~
2026-04-01T12:27:04,988   In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Tp = nlohmann::json_abi_v3_11_3::basic_json<>; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’,
2026-04-01T12:27:04,989       inlined from ‘bool nlohmann::json_abi_v3_11_3::detail::json_sax_dom_parser<BasicJsonType>::key(string_t&) [with BasicJsonType = nlohmann::json_abi_v3_11_3::basic_json<>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/nlohmann/detail/input/json_sax.hpp:246:79,
2026-04-01T12:27:04,990       inlined from ‘bool nlohmann::json_abi_v3_11_3::detail::parser<BasicJsonType, InputAdapterType>::sax_parse_internal(SAX*) [with SAX = nlohmann::json_abi_v3_11_3::detail::json_sax_dom_parser<nlohmann::json_abi_v3_11_3::basic_json<> >; BasicJsonType = nlohmann::json_abi_v3_11_3::basic_json<>; InputAdapterType = nlohmann::json_abi_v3_11_3::detail::input_stream_adapter]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/nlohmann/detail/input/parser.hpp:430:21:
2026-04-01T12:27:04,991   /usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:27:04,992     511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
2026-04-01T12:27:04,994         |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:27:04,995     512 |                                             std::tuple<const key_type&>(__k),
2026-04-01T12:27:04,996         |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:27:04,997     513 |                                             std::tuple<>());
2026-04-01T12:27:04,998         |                                             ~~~~~~~~~~~~~~~
2026-04-01T12:27:24,113   [67/88] /usr/bin/arm-linux-gnueabihf-g++ -DQuantumIO_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/quantumio -I/tmp/tmpxp_nina1/build/avogadro/io -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/quantumio/CMakeFiles/QuantumIO.dir/mopacaux.cpp.o -MF avogadro/quantumio/CMakeFiles/QuantumIO.dir/mopacaux.cpp.o.d -o avogadro/quantumio/CMakeFiles/QuantumIO.dir/mopacaux.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/mopacaux.cpp
2026-04-01T12:27:24,113   In file included from /usr/include/c++/12/vector:70,
2026-04-01T12:27:24,114                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:12,
2026-04-01T12:27:24,115                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/mopacaux.h:10,
2026-04-01T12:27:24,117                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/mopacaux.cpp:6:
2026-04-01T12:27:24,118   /usr/include/c++/12/bits/vector.tcc: In function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]’:
2026-04-01T12:27:24,120   /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2026-04-01T12:27:24,122     739 |       vector<_Tp, _Alloc>::
2026-04-01T12:27:24,122         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:27:24,123   /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:27:24,124   /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:27:24,125   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:27:24,126   /usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1> >::iterator’ changed in GCC 7.1
2026-04-01T12:27:24,127     523 |     vector<_Tp, _Alloc>::
2026-04-01T12:27:24,128         |     ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:27:24,129   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const Eigen::Matrix<double, 3, 1, 0, 3, 1>&}; _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:27:24,131   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1> >::iterator’ changed in GCC 7.1
2026-04-01T12:27:24,132     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:27:24,133         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:27:24,134   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’:
2026-04-01T12:27:24,136   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2026-04-01T12:27:24,137   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:27:24,138       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:27:24,148       inlined from ‘std::vector<double> Avogadro::QuantumIO::MopacAux::readArrayD(std::istream&, unsigned int)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/mopacaux.cpp:340:20:
2026-04-01T12:27:24,149   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:27:24,150     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:27:24,151         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:27:24,153   In file included from /usr/include/c++/12/vector:64:
2026-04-01T12:27:24,155   In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:27:24,156       inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; <template-parameter-2-2> = void; _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22,
2026-04-01T12:27:24,157       inlined from ‘bool Avogadro::QuantumIO::MopacAux::readVibrationFrequencies(std::istream&, unsigned int)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/mopacaux.cpp:398:23:
2026-04-01T12:27:24,158   /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2026-04-01T12:27:24,159    1779 |           _M_range_insert(__pos, __first, __last,
2026-04-01T12:27:24,159         |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:27:24,160    1780 |                           std::__iterator_category(__first));
2026-04-01T12:27:24,161         |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:27:24,163   /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:27:24,165   In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:27:24,166       inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; <template-parameter-2-2> = void; _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22,
2026-04-01T12:27:24,166       inlined from ‘bool Avogadro::QuantumIO::MopacAux::readVibrationIntensities(std::istream&, unsigned int)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/mopacaux.cpp:405:25:
2026-04-01T12:27:24,167   /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2026-04-01T12:27:24,169    1779 |           _M_range_insert(__pos, __first, __last,
2026-04-01T12:27:24,170         |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:27:24,179    1780 |                           std::__iterator_category(__first));
2026-04-01T12:27:24,179         |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:27:24,181   /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:27:24,182   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:27:24,183       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:27:24,185       inlined from ‘void Avogadro::QuantumIO::MopacAux::processLine(std::istream&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/mopacaux.cpp:151:27:
2026-04-01T12:27:24,186   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:27:24,187     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:27:24,188         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:27:24,189   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:27:24,190       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:27:24,191       inlined from ‘void Avogadro::QuantumIO::MopacAux::processLine(std::istream&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/mopacaux.cpp:157:25:
2026-04-01T12:27:24,192   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:27:24,193     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:27:24,194         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:27:24,195   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:27:24,196       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:27:24,197       inlined from ‘bool Avogadro::Core::Molecule::setAtomPosition3d(Avogadro::Index, const Avogadro::Vector3&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:1207:27,
2026-04-01T12:27:24,204       inlined from ‘void Avogadro::Core::AtomTemplate<Molecule_T>::setPosition3d(const Avogadro::Vector3&) [with Molecule_T = Avogadro::Core::Molecule]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/atom.h:317:32,
2026-04-01T12:27:24,205       inlined from ‘virtual bool Avogadro::QuantumIO::MopacAux::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/mopacaux.cpp:51:20:
2026-04-01T12:27:24,206   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1> > >’ changed in GCC 7.1
2026-04-01T12:27:24,208    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:27:24,210         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:27:24,211   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:27:24,212       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22,
2026-04-01T12:27:24,213       inlined from ‘virtual bool Avogadro::QuantumIO::MopacAux::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/mopacaux.cpp:81:27:
2026-04-01T12:27:24,214   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1> > >’ changed in GCC 7.1
2026-04-01T12:27:24,215    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:27:24,216         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:27:24,218   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:27:24,219       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22,
2026-04-01T12:27:24,220       inlined from ‘virtual bool Avogadro::QuantumIO::MopacAux::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/mopacaux.cpp:115:28:
2026-04-01T12:27:24,221   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1> > >’ changed in GCC 7.1
2026-04-01T12:27:24,222    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:27:24,223         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:27:24,712   [68/88] /usr/bin/arm-linux-gnueabihf-g++ -DQuantumIO_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/quantumio -I/tmp/tmpxp_nina1/build/avogadro/io -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/quantumio/CMakeFiles/QuantumIO.dir/molden.cpp.o -MF avogadro/quantumio/CMakeFiles/QuantumIO.dir/molden.cpp.o.d -o avogadro/quantumio/CMakeFiles/QuantumIO.dir/molden.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/molden.cpp
2026-04-01T12:27:24,713   In file included from /usr/include/c++/12/vector:70,
2026-04-01T12:27:24,714                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:12,
2026-04-01T12:27:24,714                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/molden.h:10,
2026-04-01T12:27:24,715                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/molden.cpp:6:
2026-04-01T12:27:24,716   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]’:
2026-04-01T12:27:24,717   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2026-04-01T12:27:24,719     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:27:24,720         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:27:24,721   In file included from /usr/include/c++/12/vector:64:
2026-04-01T12:27:24,722   /usr/include/c++/12/bits/stl_vector.h: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’:
2026-04-01T12:27:24,723   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:27:24,724    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:27:24,726         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:27:24,728   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:27:24,729       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = double]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22:
2026-04-01T12:27:24,730   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:27:24,731    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:27:24,731         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:27:24,733   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:27:24,734   /usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:27:24,735     523 |     vector<_Tp, _Alloc>::
2026-04-01T12:27:24,736         |     ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:27:24,737   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’:
2026-04-01T12:27:24,738   /usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2026-04-01T12:27:24,739   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const Eigen::Matrix<double, 3, 1, 0, 3, 1>&}; _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:27:24,740   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:27:24,740     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:27:24,741         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:27:24,742   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:27:24,743       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22:
2026-04-01T12:27:24,744   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:27:24,745    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:27:24,747         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:27:24,749   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:27:24,759       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:27:24,760       inlined from ‘bool Avogadro::Core::Molecule::setAtomPosition3d(Avogadro::Index, const Avogadro::Vector3&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:1207:27,
2026-04-01T12:27:24,761       inlined from ‘void Avogadro::Core::AtomTemplate<Molecule_T>::setPosition3d(const Avogadro::Vector3&) [with Molecule_T = Avogadro::Core::Molecule]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/atom.h:317:32,
2026-04-01T12:27:24,762       inlined from ‘virtual bool Avogadro::QuantumIO::MoldenFile::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/molden.cpp:71:20:
2026-04-01T12:27:24,763   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:27:24,764    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:27:24,766         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:27:24,768   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:27:24,772       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = double]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:27:24,773       inlined from ‘virtual bool Avogadro::QuantumIO::MoldenFile::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/molden.cpp:94:29:
2026-04-01T12:27:24,774   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:27:24,774    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:27:24,775         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:27:29,709   [69/88] /usr/bin/arm-linux-gnueabihf-g++ -DQuantumIO_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/quantumio -I/tmp/tmpxp_nina1/build/avogadro/io -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/quantumio/CMakeFiles/QuantumIO.dir/nwchemlog.cpp.o -MF avogadro/quantumio/CMakeFiles/QuantumIO.dir/nwchemlog.cpp.o.d -o avogadro/quantumio/CMakeFiles/QuantumIO.dir/nwchemlog.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/nwchemlog.cpp
2026-04-01T12:27:29,711   In file included from /usr/include/c++/12/vector:70,
2026-04-01T12:27:29,712                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:12,
2026-04-01T12:27:29,713                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/nwchemlog.h:10,
2026-04-01T12:27:29,714                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/nwchemlog.cpp:6:
2026-04-01T12:27:29,715   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:27:29,716   /usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:27:29,719     523 |     vector<_Tp, _Alloc>::
2026-04-01T12:27:29,720         |     ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:27:29,721   In file included from /usr/include/c++/12/vector:64:
2026-04-01T12:27:29,722   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:27:29,723       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:27:29,725       inlined from ‘bool Avogadro::Core::Molecule::setAtomPosition3d(Avogadro::Index, const Avogadro::Vector3&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:1207:27,
2026-04-01T12:27:29,726       inlined from ‘void Avogadro::Core::AtomTemplate<Molecule_T>::setPosition3d(const Avogadro::Vector3&) [with Molecule_T = Avogadro::Core::Molecule]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/atom.h:317:32,
2026-04-01T12:27:29,733       inlined from ‘void Avogadro::QuantumIO::NWChemLog::readAtoms(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/nwchemlog.cpp:145:20:
2026-04-01T12:27:29,738   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:27:29,739    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:27:29,740         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:27:29,741   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’:
2026-04-01T12:27:29,743   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2026-04-01T12:27:29,745     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:27:29,746         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:27:29,749   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]’:
2026-04-01T12:27:29,750   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2026-04-01T12:27:29,751   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:27:29,768       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = double]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22,
2026-04-01T12:27:29,769       inlined from ‘void Avogadro::QuantumIO::NWChemLog::readIntensities(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/nwchemlog.cpp:261:28:
2026-04-01T12:27:29,770   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:27:29,771    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:27:29,772         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:27:29,773   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const Eigen::Matrix<double, 3, 1, 0, 3, 1>&}; _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:27:29,774   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:27:29,775     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:27:29,776         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:27:29,777   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:27:29,778       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:27:29,779       inlined from ‘void Avogadro::QuantumIO::NWChemLog::readFrequencies(const std::string&, std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/nwchemlog.cpp:204:26:
2026-04-01T12:27:29,780   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:27:29,781     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:27:29,782         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:27:29,783   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:27:29,784       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:27:29,784       inlined from ‘void Avogadro::QuantumIO::NWChemLog::readFrequencies(const std::string&, std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/nwchemlog.cpp:225:28:
2026-04-01T12:27:29,786   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:27:29,787     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:27:29,788         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:27:29,789   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:27:29,790       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = double]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22,
2026-04-01T12:27:29,792       inlined from ‘void Avogadro::QuantumIO::NWChemLog::readFrequencies(const std::string&, std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/nwchemlog.cpp:236:28:
2026-04-01T12:27:29,793   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:27:29,794    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:27:29,795         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:27:29,796   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:27:29,797       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22,
2026-04-01T12:27:29,798       inlined from ‘void Avogadro::QuantumIO::NWChemLog::readFrequencies(const std::string&, std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/nwchemlog.cpp:239:19:
2026-04-01T12:27:29,799   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:27:29,800    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:27:29,801         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:28:03,335   [70/88] /usr/bin/arm-linux-gnueabihf-g++ -DQuantumIO_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/quantumio -I/tmp/tmpxp_nina1/build/avogadro/io -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/quantumio/CMakeFiles/QuantumIO.dir/nwchemjson.cpp.o -MF avogadro/quantumio/CMakeFiles/QuantumIO.dir/nwchemjson.cpp.o.d -o avogadro/quantumio/CMakeFiles/QuantumIO.dir/nwchemjson.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/nwchemjson.cpp
2026-04-01T12:28:03,336   In file included from /usr/include/c++/12/vector:70,
2026-04-01T12:28:03,337                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/fileformat.h:15,
2026-04-01T12:28:03,338                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/nwchemjson.h:10,
2026-04-01T12:28:03,339                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/nwchemjson.cpp:6:
2026-04-01T12:28:03,340   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:28:03,341   /usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:28:03,342     523 |     vector<_Tp, _Alloc>::
2026-04-01T12:28:03,343         |     ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:03,344   In file included from /usr/include/c++/12/vector:64:
2026-04-01T12:28:03,345   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:28:03,346       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19:
2026-04-01T12:28:03,347   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:28:03,348    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:28:03,349         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:03,350   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’:
2026-04-01T12:28:03,351   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2026-04-01T12:28:03,352     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:28:03,358         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:03,368   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]’:
2026-04-01T12:28:03,369   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2026-04-01T12:28:03,370   In file included from /usr/include/c++/12/set:60,
2026-04-01T12:28:03,371                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/graph.h:13,
2026-04-01T12:28:03,372                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:17,
2026-04-01T12:28:03,374                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/nwchemjson.cpp:11:
2026-04-01T12:28:03,375   /usr/include/c++/12/bits/stl_tree.h: In member function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’:
2026-04-01T12:28:03,376   /usr/include/c++/12/bits/stl_tree.h:2209:5: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:28:03,377    2209 |     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
2026-04-01T12:28:03,377         |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:03,378   /usr/include/c++/12/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::nullptr_t}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’:
2026-04-01T12:28:03,379   /usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:28:03,380    2457 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
2026-04-01T12:28:03,381         |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:03,382   In file included from /usr/include/c++/12/map:61,
2026-04-01T12:28:03,383                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/variantmap.h:13,
2026-04-01T12:28:03,384                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:19:
2026-04-01T12:28:03,385   In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::iterator std::map<_Key, _Tp, _Compare, _Alloc>::emplace_hint(const_iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::nullptr_t}; _Key = std::__cxx11::basic_string<char>; _Tp = nlohmann::json_abi_v3_11_3::basic_json<>; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’,
2026-04-01T12:28:03,398       inlined from ‘std::pair<typename std::_Rb_tree<_Key, std::pair<const _Key, _Val>, std::_Select1st<std::pair<const _Key, _Val> >, _Compare, typename __gnu_cxx::__alloc_traits<_Allocator>::rebind<std::pair<const _Key, _Val> >::other>::iterator, bool> std::map<_Key, _Tp, _Compare, _Alloc>::emplace(_Args&& ...) [with _Args = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::nullptr_t}; _Key = std::__cxx11::basic_string<char>; _Tp = nlohmann::json_abi_v3_11_3::basic_json<>; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’ at /usr/include/c++/12/bits/stl_map.h:599:22,
2026-04-01T12:28:03,408       inlined from ‘nlohmann::json_abi_v3_11_3::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer, BinaryType, CustomBaseClass>::value_type& nlohmann::json_abi_v3_11_3::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer, BinaryType, CustomBaseClass>::operator[](typename object_t::key_type) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::json_abi_v3_11_3::adl_serializer; BinaryType = std::vector<unsigned char>; CustomBaseClass = void]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/nlohmann/json.hpp:2132:57:
2026-04-01T12:28:03,409   /usr/include/c++/12/bits/stl_map.h:638:45: note: parameter passing for argument of type ‘std::map<std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<>, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ {aka ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’} changed in GCC 7.1
2026-04-01T12:28:03,410     638 |           return _M_t._M_emplace_hint_unique(__pos,
2026-04-01T12:28:03,411         |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~
2026-04-01T12:28:03,413     639 |                                              std::forward<_Args>(__args)...);
2026-04-01T12:28:03,414         |                                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:03,416   /usr/include/c++/12/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’:
2026-04-01T12:28:03,417   /usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:28:03,418    2457 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
2026-04-01T12:28:03,419         |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:03,420   In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Tp = nlohmann::json_abi_v3_11_3::basic_json<>; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’,
2026-04-01T12:28:03,421       inlined from ‘bool nlohmann::json_abi_v3_11_3::detail::json_sax_dom_callback_parser<BasicJsonType>::key(string_t&) [with BasicJsonType = nlohmann::json_abi_v3_11_3::basic_json<>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/nlohmann/detail/input/json_sax.hpp:441:83:
2026-04-01T12:28:03,422   /usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:28:03,422     511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
2026-04-01T12:28:03,423         |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:03,424     512 |                                             std::tuple<const key_type&>(__k),
2026-04-01T12:28:03,425         |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:03,426     513 |                                             std::tuple<>());
2026-04-01T12:28:03,427         |                                             ~~~~~~~~~~~~~~~
2026-04-01T12:28:03,428   In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Tp = nlohmann::json_abi_v3_11_3::basic_json<>; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’,
2026-04-01T12:28:03,429       inlined from ‘bool nlohmann::json_abi_v3_11_3::detail::json_sax_dom_parser<BasicJsonType>::key(string_t&) [with BasicJsonType = nlohmann::json_abi_v3_11_3::basic_json<>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/nlohmann/detail/input/json_sax.hpp:246:79,
2026-04-01T12:28:03,438       inlined from ‘bool nlohmann::json_abi_v3_11_3::detail::parser<BasicJsonType, InputAdapterType>::sax_parse_internal(SAX*) [with SAX = nlohmann::json_abi_v3_11_3::detail::json_sax_dom_parser<nlohmann::json_abi_v3_11_3::basic_json<> >; BasicJsonType = nlohmann::json_abi_v3_11_3::basic_json<>; InputAdapterType = nlohmann::json_abi_v3_11_3::detail::input_stream_adapter]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/nlohmann/detail/input/parser.hpp:219:29:
2026-04-01T12:28:03,439   /usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:28:03,448     511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
2026-04-01T12:28:03,449         |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:03,450     512 |                                             std::tuple<const key_type&>(__k),
2026-04-01T12:28:03,450         |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:03,451     513 |                                             std::tuple<>());
2026-04-01T12:28:03,452         |                                             ~~~~~~~~~~~~~~~
2026-04-01T12:28:03,453   In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Tp = nlohmann::json_abi_v3_11_3::basic_json<>; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’,
2026-04-01T12:28:03,454       inlined from ‘bool nlohmann::json_abi_v3_11_3::detail::json_sax_dom_parser<BasicJsonType>::key(string_t&) [with BasicJsonType = nlohmann::json_abi_v3_11_3::basic_json<>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/nlohmann/detail/input/json_sax.hpp:246:79,
2026-04-01T12:28:03,455       inlined from ‘bool nlohmann::json_abi_v3_11_3::detail::parser<BasicJsonType, InputAdapterType>::sax_parse_internal(SAX*) [with SAX = nlohmann::json_abi_v3_11_3::detail::json_sax_dom_parser<nlohmann::json_abi_v3_11_3::basic_json<> >; BasicJsonType = nlohmann::json_abi_v3_11_3::basic_json<>; InputAdapterType = nlohmann::json_abi_v3_11_3::detail::input_stream_adapter]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/nlohmann/detail/input/parser.hpp:430:21:
2026-04-01T12:28:03,455   /usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:28:03,456     511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
2026-04-01T12:28:03,457         |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:03,459     512 |                                             std::tuple<const key_type&>(__k),
2026-04-01T12:28:03,460         |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:03,461     513 |                                             std::tuple<>());
2026-04-01T12:28:03,462         |                                             ~~~~~~~~~~~~~~~
2026-04-01T12:28:03,463   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:28:03,464       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:28:03,465       inlined from ‘bool Avogadro::Core::Molecule::setAtomPosition3d(Avogadro::Index, const Avogadro::Vector3&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:1207:27,
2026-04-01T12:28:03,466       inlined from ‘void Avogadro::Core::AtomTemplate<Molecule_T>::setPosition3d(const Avogadro::Vector3&) [with Molecule_T = Avogadro::Core::Molecule]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/atom.h:317:32,
2026-04-01T12:28:03,468       inlined from ‘virtual bool Avogadro::QuantumIO::NWChemJson::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/nwchemjson.cpp:139:22:
2026-04-01T12:28:03,469   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:28:03,470    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:28:03,471         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:03,472   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:28:03,472       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:28:03,473       inlined from ‘virtual bool Avogadro::QuantumIO::NWChemJson::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/nwchemjson.cpp:247:29:
2026-04-01T12:28:03,474   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:28:03,475     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:28:03,476         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:03,476   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:28:03,477       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2026-04-01T12:28:03,479       inlined from ‘virtual bool Avogadro::QuantumIO::NWChemJson::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/nwchemjson.cpp:249:30:
2026-04-01T12:28:03,480   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:28:03,481     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:28:03,482         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:03,483   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:28:03,484       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = double]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22,
2026-04-01T12:28:03,485       inlined from ‘virtual bool Avogadro::QuantumIO::NWChemJson::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/nwchemjson.cpp:280:30:
2026-04-01T12:28:03,486   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:28:03,488    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:28:03,489         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:28:03,490   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:28:03,491       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = double]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22,
2026-04-01T12:28:03,492       inlined from ‘virtual bool Avogadro::QuantumIO::NWChemJson::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/nwchemjson.cpp:282:30:
2026-04-01T12:28:03,493   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:28:03,494    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:28:03,495         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:28:19,326   [71/88] /usr/bin/arm-linux-gnueabihf-g++ -DQuantumIO_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/quantumio -I/tmp/tmpxp_nina1/build/avogadro/io -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/quantumio/CMakeFiles/QuantumIO.dir/orca.cpp.o -MF avogadro/quantumio/CMakeFiles/QuantumIO.dir/orca.cpp.o.d -o avogadro/quantumio/CMakeFiles/QuantumIO.dir/orca.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/orca.cpp
2026-04-01T12:28:19,327   In file included from /usr/include/c++/12/vector:70,
2026-04-01T12:28:19,328                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:12,
2026-04-01T12:28:19,329                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/orca.h:10,
2026-04-01T12:28:19,331                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/orca.cpp:6:
2026-04-01T12:28:19,332   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]’:
2026-04-01T12:28:19,333   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2026-04-01T12:28:19,334     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:28:19,335         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:19,336   In file included from /usr/include/c++/12/vector:64:
2026-04-01T12:28:19,338   /usr/include/c++/12/bits/stl_vector.h: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’:
2026-04-01T12:28:19,339   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:28:19,340    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:28:19,341         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:28:19,342   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:28:19,343       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = double]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22:
2026-04-01T12:28:19,344   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:28:19,345    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:28:19,346         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:28:19,348   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:28:19,349       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = double]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22,
2026-04-01T12:28:19,351       inlined from ‘void Avogadro::QuantumIO::ORCAOutput::parseMCD()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/orca.cpp:1275:36:
2026-04-01T12:28:19,352   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:28:19,353    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:28:19,354         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:28:19,355   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:28:19,356       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = double]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22,
2026-04-01T12:28:19,357       inlined from ‘void Avogadro::QuantumIO::ORCAOutput::parseMCD()’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/orca.cpp:1276:27:
2026-04-01T12:28:19,358   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:28:19,359    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:28:19,360         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:28:19,361   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const Eigen::Matrix<double, 3, 1, 0, 3, 1>&}; _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:28:19,362   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1> >::iterator’ changed in GCC 7.1
2026-04-01T12:28:19,363     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:28:19,364         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:19,365   /usr/include/c++/12/bits/stl_vector.h: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:28:19,366   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1> > >’ changed in GCC 7.1
2026-04-01T12:28:19,368    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:28:19,369         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:28:19,370   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:28:19,371       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22:
2026-04-01T12:28:19,372   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1> > >’ changed in GCC 7.1
2026-04-01T12:28:19,373    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:28:19,374         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:28:19,376   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:28:19,377   /usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1> >::iterator’ changed in GCC 7.1
2026-04-01T12:28:19,378     523 |     vector<_Tp, _Alloc>::
2026-04-01T12:28:19,379         |     ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:19,380   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:28:19,381       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19:
2026-04-01T12:28:19,382   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1> > >’ changed in GCC 7.1
2026-04-01T12:28:19,383    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:28:19,388         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:19,389   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’:
2026-04-01T12:28:19,391   /usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2026-04-01T12:28:19,392     523 |     vector<_Tp, _Alloc>::
2026-04-01T12:28:19,394         |     ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:19,395   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:28:19,396       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = double]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19:
2026-04-01T12:28:19,397   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:28:19,398    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:28:19,408         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:19,409   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:28:19,411       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22,
2026-04-01T12:28:19,415       inlined from ‘virtual bool Avogadro::QuantumIO::ORCAOutput::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/orca.cpp:92:28:
2026-04-01T12:28:19,416   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1> > >’ changed in GCC 7.1
2026-04-01T12:28:19,417    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:28:19,418         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:28:26,207   [72/88] /usr/bin/arm-linux-gnueabihf-g++ -DQuantumIO_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/quantumio -I/tmp/tmpxp_nina1/build/avogadro/io -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/quantumio/CMakeFiles/QuantumIO.dir/qcschema.cpp.o -MF avogadro/quantumio/CMakeFiles/QuantumIO.dir/qcschema.cpp.o.d -o avogadro/quantumio/CMakeFiles/QuantumIO.dir/qcschema.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/qcschema.cpp
2026-04-01T12:28:26,208   In file included from /usr/include/c++/12/vector:70,
2026-04-01T12:28:26,209                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/fileformat.h:15,
2026-04-01T12:28:26,210                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/qcschema.h:10,
2026-04-01T12:28:26,211                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/qcschema.cpp:6:
2026-04-01T12:28:26,212   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:28:26,213   /usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:28:26,214     523 |     vector<_Tp, _Alloc>::
2026-04-01T12:28:26,215         |     ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:26,216   In file included from /usr/include/c++/12/vector:64:
2026-04-01T12:28:26,216   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:28:26,217       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19:
2026-04-01T12:28:26,218   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:28:26,219    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:28:26,221         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:26,223   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’:
2026-04-01T12:28:26,224   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2026-04-01T12:28:26,225     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:28:26,226         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:26,227   /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’:
2026-04-01T12:28:26,229   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:28:26,230     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2026-04-01T12:28:26,231         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:26,233   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const Eigen::Matrix<double, 3, 1, 0, 3, 1>&}; _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’:
2026-04-01T12:28:26,236   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > >::iterator’ changed in GCC 7.1
2026-04-01T12:28:26,237     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:28:26,248         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:26,249   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:28:26,250       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22:
2026-04-01T12:28:26,251   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:28:26,252    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:28:26,253         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:28:26,254   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]’:
2026-04-01T12:28:26,255   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2026-04-01T12:28:26,255     439 |       vector<_Tp, _Alloc>::
2026-04-01T12:28:26,256         |       ^~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:26,257   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2026-04-01T12:28:26,258       inlined from ‘void Avogadro::Core::Array<T>::push_back(const ValueType&) [with T = double]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:252:22:
2026-04-01T12:28:26,259   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2026-04-01T12:28:26,261    1287 |           _M_realloc_insert(end(), __x);
2026-04-01T12:28:26,262         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2026-04-01T12:28:26,264   In file included from /usr/include/c++/12/map:60,
2026-04-01T12:28:26,265                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/io/fileformatmanager.h:13,
2026-04-01T12:28:26,266                    from /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/qcschema.cpp:9:
2026-04-01T12:28:26,268   /usr/include/c++/12/bits/stl_tree.h: In member function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’:
2026-04-01T12:28:26,269   /usr/include/c++/12/bits/stl_tree.h:2209:5: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:28:26,270    2209 |     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
2026-04-01T12:28:26,271         |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:26,272   /usr/include/c++/12/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::nullptr_t}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’:
2026-04-01T12:28:26,273   /usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:28:26,274    2457 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
2026-04-01T12:28:26,275         |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:26,276   In file included from /usr/include/c++/12/map:61:
2026-04-01T12:28:26,277   In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::iterator std::map<_Key, _Tp, _Compare, _Alloc>::emplace_hint(const_iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::nullptr_t}; _Key = std::__cxx11::basic_string<char>; _Tp = nlohmann::json_abi_v3_11_3::basic_json<>; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’,
2026-04-01T12:28:26,278       inlined from ‘std::pair<typename std::_Rb_tree<_Key, std::pair<const _Key, _Tp>, std::_Select1st<std::pair<const _Key, _Tp> >, _Compare, typename __gnu_cxx::__alloc_traits<_Allocator>::rebind<std::pair<const _Key, _Tp> >::other>::iterator, bool> std::map<_Key, _Tp, _Compare, _Alloc>::emplace(_Args&& ...) [with _Args = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::nullptr_t}; _Key = std::__cxx11::basic_string<char>; _Tp = nlohmann::json_abi_v3_11_3::basic_json<>; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’ at /usr/include/c++/12/bits/stl_map.h:599:22,
2026-04-01T12:28:26,279       inlined from ‘nlohmann::json_abi_v3_11_3::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer, BinaryType, CustomBaseClass>::value_type& nlohmann::json_abi_v3_11_3::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer, BinaryType, CustomBaseClass>::operator[](typename object_t::key_type) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::json_abi_v3_11_3::adl_serializer; BinaryType = std::vector<unsigned char, std::allocator<unsigned char> >; CustomBaseClass = void]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/nlohmann/json.hpp:2132:57:
2026-04-01T12:28:26,281   /usr/include/c++/12/bits/stl_map.h:638:45: note: parameter passing for argument of type ‘std::map<std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<>, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ {aka ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’} changed in GCC 7.1
2026-04-01T12:28:26,288     638 |           return _M_t._M_emplace_hint_unique(__pos,
2026-04-01T12:28:26,289         |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~
2026-04-01T12:28:26,290     639 |                                              std::forward<_Args>(__args)...);
2026-04-01T12:28:26,291         |                                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:26,292   /usr/include/c++/12/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’:
2026-04-01T12:28:26,293   /usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:28:26,295    2457 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
2026-04-01T12:28:26,296         |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:26,297   In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Tp = nlohmann::json_abi_v3_11_3::basic_json<>; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’,
2026-04-01T12:28:26,299       inlined from ‘bool nlohmann::json_abi_v3_11_3::detail::json_sax_dom_callback_parser<BasicJsonType>::key(string_t&) [with BasicJsonType = nlohmann::json_abi_v3_11_3::basic_json<>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/nlohmann/detail/input/json_sax.hpp:441:83:
2026-04-01T12:28:26,300   /usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:28:26,300     511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
2026-04-01T12:28:26,302         |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:26,303     512 |                                             std::tuple<const key_type&>(__k),
2026-04-01T12:28:26,304         |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:26,305     513 |                                             std::tuple<>());
2026-04-01T12:28:26,307         |                                             ~~~~~~~~~~~~~~~
2026-04-01T12:28:26,308   In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Tp = nlohmann::json_abi_v3_11_3::basic_json<>; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’,
2026-04-01T12:28:26,309       inlined from ‘bool nlohmann::json_abi_v3_11_3::detail::json_sax_dom_parser<BasicJsonType>::key(string_t&) [with BasicJsonType = nlohmann::json_abi_v3_11_3::basic_json<>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/nlohmann/detail/input/json_sax.hpp:246:79,
2026-04-01T12:28:26,310       inlined from ‘bool nlohmann::json_abi_v3_11_3::detail::parser<BasicJsonType, InputAdapterType>::sax_parse_internal(SAX*) [with SAX = nlohmann::json_abi_v3_11_3::detail::json_sax_dom_parser<nlohmann::json_abi_v3_11_3::basic_json<> >; BasicJsonType = nlohmann::json_abi_v3_11_3::basic_json<>; InputAdapterType = nlohmann::json_abi_v3_11_3::detail::input_stream_adapter]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/nlohmann/detail/input/parser.hpp:219:29:
2026-04-01T12:28:26,318   /usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:28:26,319     511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
2026-04-01T12:28:26,320         |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:26,321     512 |                                             std::tuple<const key_type&>(__k),
2026-04-01T12:28:26,322         |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:26,323     513 |                                             std::tuple<>());
2026-04-01T12:28:26,324         |                                             ~~~~~~~~~~~~~~~
2026-04-01T12:28:26,325   In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Tp = nlohmann::json_abi_v3_11_3::basic_json<>; _Compare = std::less<void>; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >]’,
2026-04-01T12:28:26,327       inlined from ‘bool nlohmann::json_abi_v3_11_3::detail::json_sax_dom_parser<BasicJsonType>::key(string_t&) [with BasicJsonType = nlohmann::json_abi_v3_11_3::basic_json<>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/nlohmann/detail/input/json_sax.hpp:246:79,
2026-04-01T12:28:26,329       inlined from ‘bool nlohmann::json_abi_v3_11_3::detail::parser<BasicJsonType, InputAdapterType>::sax_parse_internal(SAX*) [with SAX = nlohmann::json_abi_v3_11_3::detail::json_sax_dom_parser<nlohmann::json_abi_v3_11_3::basic_json<> >; BasicJsonType = nlohmann::json_abi_v3_11_3::basic_json<>; InputAdapterType = nlohmann::json_abi_v3_11_3::detail::input_stream_adapter]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/thirdparty/nlohmann/detail/input/parser.hpp:430:21:
2026-04-01T12:28:26,330   /usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > >, std::less<void>, std::allocator<std::pair<const std::__cxx11::basic_string<char>, nlohmann::json_abi_v3_11_3::basic_json<> > > >::const_iterator’ changed in GCC 7.1
2026-04-01T12:28:26,331     511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
2026-04-01T12:28:26,332         |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:26,333     512 |                                             std::tuple<const key_type&>(__k),
2026-04-01T12:28:26,333         |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:26,334     513 |                                             std::tuple<>());
2026-04-01T12:28:26,335         |                                             ~~~~~~~~~~~~~~~
2026-04-01T12:28:26,336   In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = Eigen::Matrix<double, 3, 1>; _Alloc = std::allocator<Eigen::Matrix<double, 3, 1> >]’,
2026-04-01T12:28:26,337       inlined from ‘void Avogadro::Core::Array<T>::resize(const std::size_t&, const ValueType&) [with T = Eigen::Matrix<double, 3, 1>]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/array.h:179:19,
2026-04-01T12:28:26,338       inlined from ‘bool Avogadro::Core::Molecule::setAtomPosition3d(Avogadro::Index, const Avogadro::Vector3&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/molecule.h:1207:27,
2026-04-01T12:28:26,339       inlined from ‘void Avogadro::Core::AtomTemplate<Molecule_T>::setPosition3d(const Avogadro::Vector3&) [with Molecule_T = Avogadro::Core::Molecule]’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/atom.h:317:32,
2026-04-01T12:28:26,341       inlined from ‘virtual bool Avogadro::QuantumIO::QCSchema::read(std::istream&, Avogadro::Core::Molecule&)’ at /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/quantumio/qcschema.cpp:130:20:
2026-04-01T12:28:26,342   /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1> > > >’ changed in GCC 7.1
2026-04-01T12:28:26,343    1032 |           _M_fill_insert(end(), __new_size - size(), __x);
2026-04-01T12:28:26,345         |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2026-04-01T12:28:37,874   [73/88] /usr/bin/arm-linux-gnueabihf-g++ -Davogadrocorepython_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/python3.11 -isystem /tmp/pip-build-env-2lamrwly/overlay/local/lib/python3.11/dist-packages/pybind11/include -isystem /usr/include/eigen3 -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -flto=auto -fno-fat-lto-objects -std=c++17 -MD -MT python/CMakeFiles/avogadrocorepython.dir/core.cpp.o -MF python/CMakeFiles/avogadrocorepython.dir/core.cpp.o.d -o python/CMakeFiles/avogadrocorepython.dir/core.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/python/core.cpp
2026-04-01T12:28:42,650   [74/88] /usr/bin/arm-linux-gnueabihf-g++ -Davogadrocorepython_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/python3.11 -isystem /tmp/pip-build-env-2lamrwly/overlay/local/lib/python3.11/dist-packages/pybind11/include -isystem /usr/include/eigen3 -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -flto=auto -fno-fat-lto-objects -std=c++17 -MD -MT python/CMakeFiles/avogadrocorepython.dir/basisset.cpp.o -MF python/CMakeFiles/avogadrocorepython.dir/basisset.cpp.o.d -o python/CMakeFiles/avogadrocorepython.dir/basisset.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/python/basisset.cpp
2026-04-01T12:29:01,926   [75/88] /usr/bin/arm-linux-gnueabihf-g++ -Davogadrocorepython_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/python3.11 -isystem /tmp/pip-build-env-2lamrwly/overlay/local/lib/python3.11/dist-packages/pybind11/include -isystem /usr/include/eigen3 -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -flto=auto -fno-fat-lto-objects -std=c++17 -MD -MT python/CMakeFiles/avogadrocorepython.dir/cube.cpp.o -MF python/CMakeFiles/avogadrocorepython.dir/cube.cpp.o.d -o python/CMakeFiles/avogadrocorepython.dir/cube.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/python/cube.cpp
2026-04-01T12:29:06,275   [76/88] /usr/bin/arm-linux-gnueabihf-g++ -Davogadroiopython_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/io -I/tmp/tmpxp_nina1/build/avogadro/core -I/tmp/tmpxp_nina1/build/avogadro/quantumio -isystem /usr/include/python3.11 -isystem /tmp/pip-build-env-2lamrwly/overlay/local/lib/python3.11/dist-packages/pybind11/include -isystem /usr/include/eigen3 -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -flto=auto -fno-fat-lto-objects -std=c++17 -MD -MT python/CMakeFiles/avogadroiopython.dir/io.cpp.o -MF python/CMakeFiles/avogadroiopython.dir/io.cpp.o.d -o python/CMakeFiles/avogadroiopython.dir/io.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/python/io.cpp
2026-04-01T12:29:12,989   [77/88] /usr/bin/arm-linux-gnueabihf-g++ -Davogadrocorepython_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/python3.11 -isystem /tmp/pip-build-env-2lamrwly/overlay/local/lib/python3.11/dist-packages/pybind11/include -isystem /usr/include/eigen3 -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -flto=auto -fno-fat-lto-objects -std=c++17 -MD -MT python/CMakeFiles/avogadrocorepython.dir/molecule.cpp.o -MF python/CMakeFiles/avogadrocorepython.dir/molecule.cpp.o.d -o python/CMakeFiles/avogadrocorepython.dir/molecule.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/python/molecule.cpp
2026-04-01T12:29:53,210   [78/88] /usr/bin/arm-linux-gnueabihf-g++ -DCore_EXPORTS -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro -I/tmp/tmpxp_nina1/build/avogadro -I/tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d -I/tmp/tmpxp_nina1/build -I/tmp/tmpxp_nina1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -std=c++17 -MD -MT avogadro/core/CMakeFiles/Core.dir/residue.cpp.o -MF avogadro/core/CMakeFiles/Core.dir/residue.cpp.o.d -o avogadro/core/CMakeFiles/Core.dir/residue.cpp.o -c /tmp/pip-wheel-ro34j5ws/avogadro_15a5bda52f5842b1a8cc51a574987e0d/avogadro/core/residue.cpp
2026-04-01T12:29:53,652   [79/88] : && /usr/bin/arm-linux-gnueabihf-g++ -fPIC -O2 -DNDEBUG  -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -Wl,-soname,libAvogadroCore.so.2 -o lib/libAvogadroCore.so.2.0.0 avogadro/core/CMakeFiles/Core.dir/angleiterator.cpp.o avogadro/core/CMakeFiles/Core.dir/atomutilities.cpp.o avogadro/core/CMakeFiles/Core.dir/coordinateblockgenerator.cpp.o avogadro/core/CMakeFiles/Core.dir/crystaltools.cpp.o avogadro/core/CMakeFiles/Core.dir/cube.cpp.o avogadro/core/CMakeFiles/Core.dir/elements.cpp.o avogadro/core/CMakeFiles/Core.dir/dihedraliterator.cpp.o avogadro/core/CMakeFiles/Core.dir/gaussianset.cpp.o avogadro/core/CMakeFiles/Core.dir/gaussiansettools.cpp.o avogadro/core/CMakeFiles/Core.dir/graph.cpp.o avogadro/core/CMakeFiles/Core.dir/internalcoordinates.cpp.o avogadro/core/CMakeFiles/Core.dir/layer.cpp.o avogadro/core/CMakeFiles/Core.dir/layermanager.cpp.o avogadro/core/CMakeFiles/Core.dir/mesh.cpp.o avogadro/core/CMakeFiles/Core.dir/molecule.cpp.o avogadro/core/CMakeFiles/Core.dir/mutex.cpp.o avogadro/core/CMakeFiles/Core.dir/nameatomtyper.cpp.o avogadro/core/CMakeFiles/Core.dir/neighborperceiver.cpp.o avogadro/core/CMakeFiles/Core.dir/residue.cpp.o avogadro/core/CMakeFiles/Core.dir/ringperceiver.cpp.o avogadro/core/CMakeFiles/Core.dir/secondarystructure.cpp.o avogadro/core/CMakeFiles/Core.dir/slaterset.cpp.o avogadro/core/CMakeFiles/Core.dir/slatersettools.cpp.o avogadro/core/CMakeFiles/Core.dir/spacegroups.cpp.o avogadro/core/CMakeFiles/Core.dir/symbolatomtyper.cpp.o avogadro/core/CMakeFiles/Core.dir/unitcell.cpp.o avogadro/core/CMakeFiles/Core.dir/variantmap.cpp.o avogadro/core/CMakeFiles/Core.dir/version.cpp.o  -Wl,-rpath,::::::: && :
2026-04-01T12:29:53,697   [80/88] /usr/bin/cmake -E cmake_symlink_library lib/libAvogadroCore.so.2.0.0  lib/libAvogadroCore.so.2 lib/libAvogadroCore.so && :
2026-04-01T12:29:54,130   [81/88] : && /usr/bin/arm-linux-gnueabihf-g++ -fPIC -O2 -DNDEBUG  -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -Wl,-soname,libAvogadroCalc.so.2 -o lib/libAvogadroCalc.so.2.0.0 avogadro/calc/CMakeFiles/Calc.dir/chargemodel.cpp.o avogadro/calc/CMakeFiles/Calc.dir/chargemanager.cpp.o avogadro/calc/CMakeFiles/Calc.dir/defaultmodel.cpp.o avogadro/calc/CMakeFiles/Calc.dir/energycalculator.cpp.o avogadro/calc/CMakeFiles/Calc.dir/energyoptimizer.cpp.o avogadro/calc/CMakeFiles/Calc.dir/energymanager.cpp.o avogadro/calc/CMakeFiles/Calc.dir/lennardjones.cpp.o avogadro/calc/CMakeFiles/Calc.dir/uff.cpp.o  -Wl,-rpath,/tmp/tmpxp_nina1/build/lib:  lib/libAvogadroCore.so.2.0.0 && :
2026-04-01T12:29:54,187   [82/88] /usr/bin/cmake -E cmake_symlink_library lib/libAvogadroCalc.so.2.0.0  lib/libAvogadroCalc.so.2 lib/libAvogadroCalc.so && :
2026-04-01T12:29:54,313   [83/88] : && /usr/bin/arm-linux-gnueabihf-g++ -fPIC -O2 -DNDEBUG  -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -Wl,-soname,libAvogadroIO.so.2 -o lib/libAvogadroIO.so.2.0.0 avogadro/io/CMakeFiles/IO.dir/cjsonformat.cpp.o avogadro/io/CMakeFiles/IO.dir/cmlformat.cpp.o avogadro/io/CMakeFiles/IO.dir/cmsgpackformat.cpp.o avogadro/io/CMakeFiles/IO.dir/dcdformat.cpp.o avogadro/io/CMakeFiles/IO.dir/fileformat.cpp.o avogadro/io/CMakeFiles/IO.dir/fileformatmanager.cpp.o avogadro/io/CMakeFiles/IO.dir/gromacsformat.cpp.o avogadro/io/CMakeFiles/IO.dir/lammpsformat.cpp.o avogadro/io/CMakeFiles/IO.dir/mdlformat.cpp.o avogadro/io/CMakeFiles/IO.dir/pdbformat.cpp.o avogadro/io/CMakeFiles/IO.dir/sdfformat.cpp.o avogadro/io/CMakeFiles/IO.dir/trrformat.cpp.o avogadro/io/CMakeFiles/IO.dir/turbomoleformat.cpp.o avogadro/io/CMakeFiles/IO.dir/vaspformat.cpp.o avogadro/io/CMakeFiles/IO.dir/xyzformat.cpp.o  -Wl,-rpath,/tmp/tmpxp_nina1/build/lib:  lib/libAvogadroCore.so.2.0.0  thirdparty/libstruct.a  thirdparty/libpugixml.a && :
2026-04-01T12:29:54,357   [84/88] /usr/bin/cmake -E cmake_symlink_library lib/libAvogadroIO.so.2.0.0  lib/libAvogadroIO.so.2 lib/libAvogadroIO.so && :
2026-04-01T12:29:54,834   [85/88] : && /usr/bin/arm-linux-gnueabihf-g++ -fPIC -O2 -DNDEBUG  -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -Wl,-soname,libAvogadroQuantumIO.so.2 -o lib/libAvogadroQuantumIO.so.2.0.0 avogadro/quantumio/CMakeFiles/QuantumIO.dir/gamessus.cpp.o avogadro/quantumio/CMakeFiles/QuantumIO.dir/gaussianfchk.cpp.o avogadro/quantumio/CMakeFiles/QuantumIO.dir/gaussiancube.cpp.o avogadro/quantumio/CMakeFiles/QuantumIO.dir/genericjson.cpp.o avogadro/quantumio/CMakeFiles/QuantumIO.dir/genericoutput.cpp.o avogadro/quantumio/CMakeFiles/QuantumIO.dir/molden.cpp.o avogadro/quantumio/CMakeFiles/QuantumIO.dir/mopacaux.cpp.o avogadro/quantumio/CMakeFiles/QuantumIO.dir/nwchemjson.cpp.o avogadro/quantumio/CMakeFiles/QuantumIO.dir/nwchemlog.cpp.o avogadro/quantumio/CMakeFiles/QuantumIO.dir/orca.cpp.o avogadro/quantumio/CMakeFiles/QuantumIO.dir/qcschema.cpp.o  -Wl,-rpath,/tmp/tmpxp_nina1/build/lib:  lib/libAvogadroIO.so.2.0.0  lib/libAvogadroCore.so.2.0.0 && :
2026-04-01T12:29:54,881   [86/88] /usr/bin/cmake -E cmake_symlink_library lib/libAvogadroQuantumIO.so.2.0.0  lib/libAvogadroQuantumIO.so.2 lib/libAvogadroQuantumIO.so && :
2026-04-01T12:30:09,250   [87/88] : && /usr/bin/arm-linux-gnueabihf-g++ -fPIC -O2 -DNDEBUG  -flto=auto -shared  -o lib/avogadro/io.cpython-311-arm-linux-gnueabihf.so python/CMakeFiles/avogadroiopython.dir/io.cpp.o  -Wl,-rpath,/tmp/tmpxp_nina1/build/lib:  lib/libAvogadroQuantumIO.so.2.0.0  lib/libAvogadroIO.so.2.0.0  lib/libAvogadroCore.so.2.0.0 && cd /tmp/tmpxp_nina1/build/python && /usr/bin/arm-linux-gnueabihf-strip /tmp/tmpxp_nina1/build/lib/avogadro/io.cpython-311-arm-linux-gnueabihf.so
2026-04-01T12:30:14,422   [88/88] : && /usr/bin/arm-linux-gnueabihf-g++ -fPIC -O2 -DNDEBUG  -flto=auto -shared  -o lib/avogadro/core.cpython-311-arm-linux-gnueabihf.so python/CMakeFiles/avogadrocorepython.dir/core.cpp.o python/CMakeFiles/avogadrocorepython.dir/basisset.cpp.o python/CMakeFiles/avogadrocorepython.dir/cube.cpp.o python/CMakeFiles/avogadrocorepython.dir/molecule.cpp.o  -Wl,-rpath,/tmp/tmpxp_nina1/build/lib:  lib/libAvogadroCore.so.2.0.0 && cd /tmp/tmpxp_nina1/build/python && /usr/bin/arm-linux-gnueabihf-strip /tmp/tmpxp_nina1/build/lib/avogadro/core.cpython-311-arm-linux-gnueabihf.so
2026-04-01T12:30:14,427   *** Installing project into wheel...
2026-04-01T12:30:14,463   -- Install configuration: "Release"
2026-04-01T12:30:14,474   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/angletools.h
2026-04-01T12:30:14,477   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/angleiterator.h
2026-04-01T12:30:14,479   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/array.h
2026-04-01T12:30:14,483   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/avogadrocore.h
2026-04-01T12:30:14,485   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/color3f.h
2026-04-01T12:30:14,488   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/constraint.h
2026-04-01T12:30:14,491   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/contrastcolor.h
2026-04-01T12:30:14,493   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/coordinateset.h
2026-04-01T12:30:14,496   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/matrix.h
2026-04-01T12:30:14,498   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/types.h
2026-04-01T12:30:14,501   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/utilities.h
2026-04-01T12:30:14,504   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/vector.h
2026-04-01T12:30:14,507   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/avogadro/libAvogadroCore.so.2.0.0
2026-04-01T12:30:14,535   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/avogadro/libAvogadroCore.so.2
2026-04-01T12:30:14,538   -- Set runtime path of "/tmp/tmpxp_nina1/wheel/platlib/avogadro/libAvogadroCore.so.2.0.0" to "$ORIGIN"
2026-04-01T12:30:14,584   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/avogadro/libAvogadroCore.so
2026-04-01T12:30:14,585   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/atom.h
2026-04-01T12:30:14,589   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/atomtyper.h
2026-04-01T12:30:14,592   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/atomtyper-inline.h
2026-04-01T12:30:14,595   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/atomutilities.h
2026-04-01T12:30:14,597   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/basisset.h
2026-04-01T12:30:14,601   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/bond.h
2026-04-01T12:30:14,604   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/coordinateblockgenerator.h
2026-04-01T12:30:14,607   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/crystaltools.h
2026-04-01T12:30:14,609   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/cube.h
2026-04-01T12:30:14,612   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/dihedraliterator.h
2026-04-01T12:30:14,615   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/elements.h
2026-04-01T12:30:14,618   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/gaussianset.h
2026-04-01T12:30:14,621   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/gaussiansettools.h
2026-04-01T12:30:14,623   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/graph.h
2026-04-01T12:30:14,626   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/internalcoordinates.h
2026-04-01T12:30:14,629   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/layer.h
2026-04-01T12:30:14,632   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/layermanager.h
2026-04-01T12:30:14,634   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/mesh.h
2026-04-01T12:30:14,637   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/molecule.h
2026-04-01T12:30:14,641   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/mutex.h
2026-04-01T12:30:14,643   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/nameatomtyper.h
2026-04-01T12:30:14,646   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/neighborperceiver.h
2026-04-01T12:30:14,648   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/residue.h
2026-04-01T12:30:14,651   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/ringperceiver.h
2026-04-01T12:30:14,653   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/secondarystructure.h
2026-04-01T12:30:14,656   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/slaterset.h
2026-04-01T12:30:14,659   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/slatersettools.h
2026-04-01T12:30:14,662   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/spacegroups.h
2026-04-01T12:30:14,665   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/symbolatomtyper.h
2026-04-01T12:30:14,668   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/unitcell.h
2026-04-01T12:30:14,671   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/variant.h
2026-04-01T12:30:14,674   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/variant-inline.h
2026-04-01T12:30:14,677   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/variantmap.h
2026-04-01T12:30:14,680   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/version.h
2026-04-01T12:30:14,682   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/core/avogadrocoreexport.h
2026-04-01T12:30:14,687   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/avogadro/libAvogadroCalc.so.2.0.0
2026-04-01T12:30:14,693   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/avogadro/libAvogadroCalc.so.2
2026-04-01T12:30:14,695   -- Set runtime path of "/tmp/tmpxp_nina1/wheel/platlib/avogadro/libAvogadroCalc.so.2.0.0" to "$ORIGIN"
2026-04-01T12:30:14,714   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/avogadro/libAvogadroCalc.so
2026-04-01T12:30:14,717   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/calc/chargemodel.h
2026-04-01T12:30:14,720   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/calc/chargemanager.h
2026-04-01T12:30:14,723   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/calc/defaultmodel.h
2026-04-01T12:30:14,726   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/calc/energycalculator.h
2026-04-01T12:30:14,729   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/calc/energyoptimizer.h
2026-04-01T12:30:14,732   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/calc/energymanager.h
2026-04-01T12:30:14,735   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/calc/gradients.h
2026-04-01T12:30:14,738   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/calc/lennardjones.h
2026-04-01T12:30:14,741   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/calc/uff.h
2026-04-01T12:30:14,744   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/calc/uffdata.h
2026-04-01T12:30:14,747   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/calc/avogadrocalcexport.h
2026-04-01T12:30:14,751   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/avogadro/libAvogadroIO.so.2.0.0
2026-04-01T12:30:14,776   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/avogadro/libAvogadroIO.so.2
2026-04-01T12:30:14,778   -- Set runtime path of "/tmp/tmpxp_nina1/wheel/platlib/avogadro/libAvogadroIO.so.2.0.0" to "$ORIGIN"
2026-04-01T12:30:14,821   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/avogadro/libAvogadroIO.so
2026-04-01T12:30:14,823   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/io/cjsonformat.h
2026-04-01T12:30:14,826   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/io/cmlformat.h
2026-04-01T12:30:14,828   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/io/cmsgpackformat.h
2026-04-01T12:30:14,830   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/io/dcdformat.h
2026-04-01T12:30:14,832   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/io/fileformat.h
2026-04-01T12:30:14,835   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/io/fileformatmanager.h
2026-04-01T12:30:14,837   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/io/gromacsformat.h
2026-04-01T12:30:14,839   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/io/mdlformat.h
2026-04-01T12:30:14,842   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/io/lammpsformat.h
2026-04-01T12:30:14,844   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/io/pdbformat.h
2026-04-01T12:30:14,846   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/io/sdfformat.h
2026-04-01T12:30:14,849   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/io/trrformat.h
2026-04-01T12:30:14,851   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/io/turbomoleformat.h
2026-04-01T12:30:14,853   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/io/vaspformat.h
2026-04-01T12:30:14,855   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/io/xyzformat.h
2026-04-01T12:30:14,857   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/io/avogadroioexport.h
2026-04-01T12:30:14,861   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/avogadro/libAvogadroQuantumIO.so.2.0.0
2026-04-01T12:30:14,885   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/avogadro/libAvogadroQuantumIO.so.2
2026-04-01T12:30:14,888   -- Set runtime path of "/tmp/tmpxp_nina1/wheel/platlib/avogadro/libAvogadroQuantumIO.so.2.0.0" to "$ORIGIN"
2026-04-01T12:30:14,917   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/avogadro/libAvogadroQuantumIO.so
2026-04-01T12:30:14,919   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/quantumio/gamessus.h
2026-04-01T12:30:14,922   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/quantumio/gaussianfchk.h
2026-04-01T12:30:14,924   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/quantumio/gaussiancube.h
2026-04-01T12:30:14,926   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/quantumio/genericjson.h
2026-04-01T12:30:14,929   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/quantumio/genericoutput.h
2026-04-01T12:30:14,931   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/quantumio/molden.h
2026-04-01T12:30:14,933   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/quantumio/mopacaux.h
2026-04-01T12:30:14,935   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/quantumio/nwchemjson.h
2026-04-01T12:30:14,937   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/quantumio/nwchemlog.h
2026-04-01T12:30:14,939   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/quantumio/orca.h
2026-04-01T12:30:14,942   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/quantumio/qcschema.h
2026-04-01T12:30:14,944   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/include/avogadro/quantumio/avogadroquantumioexport.h
2026-04-01T12:30:14,948   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/avogadro/core.cpython-311-arm-linux-gnueabihf.so
2026-04-01T12:30:14,957   -- Set runtime path of "/tmp/tmpxp_nina1/wheel/platlib/avogadro/core.cpython-311-arm-linux-gnueabihf.so" to "$ORIGIN"
2026-04-01T12:30:14,983   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/avogadro/io.cpython-311-arm-linux-gnueabihf.so
2026-04-01T12:30:14,989   -- Set runtime path of "/tmp/tmpxp_nina1/wheel/platlib/avogadro/io.cpython-311-arm-linux-gnueabihf.so" to "$ORIGIN"
2026-04-01T12:30:15,006   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/avogadro/__init__.py
2026-04-01T12:30:15,009   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/avogadro/cjson.py
2026-04-01T12:30:15,012   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/avogadro/connect.py
2026-04-01T12:30:15,014   -- Installing: /tmp/tmpxp_nina1/wheel/platlib/avogadro/energy.py
2026-04-01T12:30:15,023   *** Making wheel...
2026-04-01T12:30:17,248   *** Created avogadro-2.0.0-cp311-cp311-linux_armv7l.whl
2026-04-01T12:30:17,324   Building wheel for avogadro (pyproject.toml): finished with status 'done'
2026-04-01T12:30:17,364   Created wheel for avogadro: filename=avogadro-2.0.0-cp311-cp311-linux_armv7l.whl size=3494419 sha256=e84d432895f5c9f928fbaa989633652e71e09dd577e0a8df1024ea5b8ee8c4b7
2026-04-01T12:30:17,365   Stored in directory: /tmp/pip-ephem-wheel-cache-43yvoioq/wheels/a6/a0/be/e804556102a7c428e54df52bc549c548300ecf2b817bba1fee
2026-04-01T12:30:17,380 Successfully built avogadro
2026-04-01T12:30:17,503 Removed build tracker: '/tmp/pip-build-tracker-tj3ju6ni'