2026-04-04T15:26:46,163 Created temporary directory: /tmp/pip-ephem-wheel-cache-99w2_sp6 2026-04-04T15:26:46,165 Created temporary directory: /tmp/pip-build-tracker-0rf9ku3z 2026-04-04T15:26:46,166 Initialized build tracking at /tmp/pip-build-tracker-0rf9ku3z 2026-04-04T15:26:46,166 Created build tracker: /tmp/pip-build-tracker-0rf9ku3z 2026-04-04T15:26:46,167 Entered build tracker: /tmp/pip-build-tracker-0rf9ku3z 2026-04-04T15:26:46,168 Created temporary directory: /tmp/pip-wheel-ei1ehjiq 2026-04-04T15:26:46,170 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-04T15:26:46,173 Created temporary directory: /tmp/pip-ephem-wheel-cache-6jfbc0u7 2026-04-04T15:26:46,195 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-04T15:26:46,199 2 location(s) to search for versions of tsarina: 2026-04-04T15:26:46,199 * https://pypi.org/simple/tsarina/ 2026-04-04T15:26:46,199 * https://www.piwheels.org/simple/tsarina/ 2026-04-04T15:26:46,199 Fetching project page and analyzing links: https://pypi.org/simple/tsarina/ 2026-04-04T15:26:46,200 Getting page https://pypi.org/simple/tsarina/ 2026-04-04T15:26:46,201 Found index url https://pypi.org/simple 2026-04-04T15:26:46,425 Fetched page https://pypi.org/simple/tsarina/ as application/vnd.pypi.simple.v1+json 2026-04-04T15:26:46,428 Skipping link: No binaries permitted for tsarina: https://files.pythonhosted.org/packages/69/d6/a5c260bd9cd44e62e845a273028deeeec1903aa31eb6f45a3e6e31359328/tsarina-0.1.0-py3-none-any.whl (from https://pypi.org/simple/tsarina/) (requires-python:>=3.9) 2026-04-04T15:26:46,429 Found link https://files.pythonhosted.org/packages/01/60/c0c2a4e63280cccbbc521815a0922ac4eca54ed11de9c652876513ff5184/tsarina-0.1.0.tar.gz (from https://pypi.org/simple/tsarina/) (requires-python:>=3.9), version: 0.1.0 2026-04-04T15:26:46,429 Skipping link: No binaries permitted for tsarina: https://files.pythonhosted.org/packages/c2/a4/6880e9ce39929e481167b3548edf4f808cf82d4f69293f5c785e6592479c/tsarina-0.2.0-py3-none-any.whl (from https://pypi.org/simple/tsarina/) (requires-python:>=3.9) 2026-04-04T15:26:46,431 Found link https://files.pythonhosted.org/packages/c9/56/277faedaf2e8def927886ad8f2432a048554085525c442f42f12e066dee4/tsarina-0.2.0.tar.gz (from https://pypi.org/simple/tsarina/) (requires-python:>=3.9), version: 0.2.0 2026-04-04T15:26:46,431 Skipping link: No binaries permitted for tsarina: https://files.pythonhosted.org/packages/55/40/9b8d8faec5efcd729bdedfdd06c1a3960e944d89aaf0453a6419b15b60ce/tsarina-0.3.0-py3-none-any.whl (from https://pypi.org/simple/tsarina/) (requires-python:>=3.9) 2026-04-04T15:26:46,432 Found link https://files.pythonhosted.org/packages/10/65/0a5adf206bfda470745992534faabe7ec229f5a59e02c2b0644a973038b6/tsarina-0.3.0.tar.gz (from https://pypi.org/simple/tsarina/) (requires-python:>=3.9), version: 0.3.0 2026-04-04T15:26:46,433 Skipping link: No binaries permitted for tsarina: https://files.pythonhosted.org/packages/88/b8/87852e80c98b160a92872a7b31611a35a7d52c6d698b1da869ac81905f90/tsarina-0.4.0-py3-none-any.whl (from https://pypi.org/simple/tsarina/) (requires-python:>=3.9) 2026-04-04T15:26:46,434 Found link https://files.pythonhosted.org/packages/d3/ef/0c9b610d182828a1d5c269d3483ac9535ea744f2041900559316d8280d29/tsarina-0.4.0.tar.gz (from https://pypi.org/simple/tsarina/) (requires-python:>=3.9), version: 0.4.0 2026-04-04T15:26:46,435 Fetching project page and analyzing links: https://www.piwheels.org/simple/tsarina/ 2026-04-04T15:26:46,435 Getting page https://www.piwheels.org/simple/tsarina/ 2026-04-04T15:26:46,437 Found index url https://www.piwheels.org/simple 2026-04-04T15:26:46,607 Fetched page https://www.piwheels.org/simple/tsarina/ as text/html 2026-04-04T15:26:46,609 Skipping link: No binaries permitted for tsarina: https://www.piwheels.org/simple/tsarina/tsarina-0.3.0-py3-none-any.whl#sha256=8da4a3031c799223242e74126458402fa01844057d9e9d0e235293aa0ec5ebe5 (from https://www.piwheels.org/simple/tsarina/) (requires-python:>=3.9) 2026-04-04T15:26:46,610 Skipping link: No binaries permitted for tsarina: https://www.piwheels.org/simple/tsarina/tsarina-0.2.0-py3-none-any.whl#sha256=ba31fc6c43197b9953ac3b7d22ddf0ac762d27d8d33df990dec5932ac9069e24 (from https://www.piwheels.org/simple/tsarina/) (requires-python:>=3.9) 2026-04-04T15:26:46,611 Skipping link: No binaries permitted for tsarina: https://www.piwheels.org/simple/tsarina/tsarina-0.1.0-py3-none-any.whl#sha256=b5fa745fb65518f371df272095b61fc69026ef66259d771b76be3a4cc66bd1f3 (from https://www.piwheels.org/simple/tsarina/) (requires-python:>=3.9) 2026-04-04T15:26:46,611 Skipping link: not a file: https://www.piwheels.org/simple/tsarina/ 2026-04-04T15:26:46,612 Skipping link: not a file: https://pypi.org/simple/tsarina/ 2026-04-04T15:26:46,631 Given no hashes to check 1 links for project 'tsarina': discarding no candidates 2026-04-04T15:26:46,649 Collecting tsarina==0.4.0 2026-04-04T15:26:46,651 Created temporary directory: /tmp/pip-unpack-u5kkt_rt 2026-04-04T15:26:46,878 Downloading tsarina-0.4.0.tar.gz (95 kB) 2026-04-04T15:26:47,061 Added tsarina==0.4.0 from https://files.pythonhosted.org/packages/d3/ef/0c9b610d182828a1d5c269d3483ac9535ea744f2041900559316d8280d29/tsarina-0.4.0.tar.gz to build tracker '/tmp/pip-build-tracker-0rf9ku3z' 2026-04-04T15:26:47,068 Created temporary directory: /tmp/pip-build-env-8e4t9oe5 2026-04-04T15:26:47,072 Installing build dependencies: started 2026-04-04T15:26:47,074 Running command pip subprocess to install build dependencies 2026-04-04T15:26:48,228 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-04-04T15:26:48,664 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-04T15:26:48,688 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-04T15:26:50,471 Collecting setuptools>=61.0 2026-04-04T15:26:50,662 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-04-04T15:26:50,954 Collecting wheel 2026-04-04T15:26:50,970 Using cached https://www.piwheels.org/simple/wheel/wheel-0.46.3-py3-none-any.whl (30 kB) 2026-04-04T15:26:51,157 Collecting packaging>=24.0 2026-04-04T15:26:51,173 Using cached https://www.piwheels.org/simple/packaging/packaging-26.0-py3-none-any.whl (74 kB) 2026-04-04T15:26:54,159 Installing collected packages: setuptools, packaging, wheel 2026-04-04T15:26:57,567 Creating /tmp/pip-build-env-8e4t9oe5/overlay/local/bin 2026-04-04T15:26:57,569 changing mode of /tmp/pip-build-env-8e4t9oe5/overlay/local/bin/wheel to 755 2026-04-04T15:26:57,590 Successfully installed packaging-26.0 setuptools-82.0.1 wheel-0.46.3 2026-04-04T15:26:57,872 Installing build dependencies: finished with status 'done' 2026-04-04T15:26:57,878 Getting requirements to build wheel: started 2026-04-04T15:26:57,880 Running command Getting requirements to build wheel 2026-04-04T15:26:58,509 /tmp/pip-build-env-8e4t9oe5/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-04-04T15:26:58,509 !! 2026-04-04T15:26:58,510 ******************************************************************************** 2026-04-04T15:26:58,511 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-04-04T15:26:58,513 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-04-04T15:26:58,513 or your builds will no longer be supported. 2026-04-04T15:26:58,514 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-04T15:26:58,514 ******************************************************************************** 2026-04-04T15:26:58,515 !! 2026-04-04T15:26:58,516 corresp(dist, value, root_dir) 2026-04-04T15:26:58,592 /tmp/pip-build-env-8e4t9oe5/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-04T15:26:58,592 !! 2026-04-04T15:26:58,593 ******************************************************************************** 2026-04-04T15:26:58,594 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-04T15:26:58,595 License :: OSI Approved :: Apache Software License 2026-04-04T15:26:58,596 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-04T15:26:58,596 ******************************************************************************** 2026-04-04T15:26:58,597 !! 2026-04-04T15:26:58,598 dist._finalize_license_expression() 2026-04-04T15:26:58,598 /tmp/pip-build-env-8e4t9oe5/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-04T15:26:58,599 !! 2026-04-04T15:26:58,600 ******************************************************************************** 2026-04-04T15:26:58,601 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-04T15:26:58,602 License :: OSI Approved :: Apache Software License 2026-04-04T15:26:58,603 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-04T15:26:58,604 ******************************************************************************** 2026-04-04T15:26:58,605 !! 2026-04-04T15:26:58,606 self._finalize_license_expression() 2026-04-04T15:26:58,606 running egg_info 2026-04-04T15:26:58,609 writing tsarina.egg-info/PKG-INFO 2026-04-04T15:26:58,615 writing dependency_links to tsarina.egg-info/dependency_links.txt 2026-04-04T15:26:58,617 writing entry points to tsarina.egg-info/entry_points.txt 2026-04-04T15:26:58,619 writing requirements to tsarina.egg-info/requires.txt 2026-04-04T15:26:58,621 writing top-level names to tsarina.egg-info/top_level.txt 2026-04-04T15:26:58,643 reading manifest file 'tsarina.egg-info/SOURCES.txt' 2026-04-04T15:26:58,647 reading manifest template 'MANIFEST.in' 2026-04-04T15:26:58,648 adding license file 'LICENSE' 2026-04-04T15:26:58,653 writing manifest file 'tsarina.egg-info/SOURCES.txt' 2026-04-04T15:26:58,750 Getting requirements to build wheel: finished with status 'done' 2026-04-04T15:26:58,754 Created temporary directory: /tmp/pip-modern-metadata-xzar55e_ 2026-04-04T15:26:58,756 Preparing metadata (pyproject.toml): started 2026-04-04T15:26:58,757 Running command Preparing metadata (pyproject.toml) 2026-04-04T15:26:59,319 /tmp/pip-build-env-8e4t9oe5/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-04-04T15:26:59,319 !! 2026-04-04T15:26:59,320 ******************************************************************************** 2026-04-04T15:26:59,321 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-04-04T15:26:59,322 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-04-04T15:26:59,323 or your builds will no longer be supported. 2026-04-04T15:26:59,324 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-04T15:26:59,325 ******************************************************************************** 2026-04-04T15:26:59,325 !! 2026-04-04T15:26:59,326 corresp(dist, value, root_dir) 2026-04-04T15:26:59,394 /tmp/pip-build-env-8e4t9oe5/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-04T15:26:59,395 !! 2026-04-04T15:26:59,396 ******************************************************************************** 2026-04-04T15:26:59,397 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-04T15:26:59,397 License :: OSI Approved :: Apache Software License 2026-04-04T15:26:59,398 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-04T15:26:59,399 ******************************************************************************** 2026-04-04T15:26:59,400 !! 2026-04-04T15:26:59,400 dist._finalize_license_expression() 2026-04-04T15:26:59,401 /tmp/pip-build-env-8e4t9oe5/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-04T15:26:59,401 !! 2026-04-04T15:26:59,402 ******************************************************************************** 2026-04-04T15:26:59,402 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-04T15:26:59,403 License :: OSI Approved :: Apache Software License 2026-04-04T15:26:59,405 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-04T15:26:59,405 ******************************************************************************** 2026-04-04T15:26:59,407 !! 2026-04-04T15:26:59,407 self._finalize_license_expression() 2026-04-04T15:26:59,408 running dist_info 2026-04-04T15:26:59,416 creating /tmp/pip-modern-metadata-xzar55e_/tsarina.egg-info 2026-04-04T15:26:59,417 writing /tmp/pip-modern-metadata-xzar55e_/tsarina.egg-info/PKG-INFO 2026-04-04T15:26:59,423 writing dependency_links to /tmp/pip-modern-metadata-xzar55e_/tsarina.egg-info/dependency_links.txt 2026-04-04T15:26:59,425 writing entry points to /tmp/pip-modern-metadata-xzar55e_/tsarina.egg-info/entry_points.txt 2026-04-04T15:26:59,427 writing requirements to /tmp/pip-modern-metadata-xzar55e_/tsarina.egg-info/requires.txt 2026-04-04T15:26:59,428 writing top-level names to /tmp/pip-modern-metadata-xzar55e_/tsarina.egg-info/top_level.txt 2026-04-04T15:26:59,430 writing manifest file '/tmp/pip-modern-metadata-xzar55e_/tsarina.egg-info/SOURCES.txt' 2026-04-04T15:26:59,449 reading manifest file '/tmp/pip-modern-metadata-xzar55e_/tsarina.egg-info/SOURCES.txt' 2026-04-04T15:26:59,451 reading manifest template 'MANIFEST.in' 2026-04-04T15:26:59,452 adding license file 'LICENSE' 2026-04-04T15:26:59,456 writing manifest file '/tmp/pip-modern-metadata-xzar55e_/tsarina.egg-info/SOURCES.txt' 2026-04-04T15:26:59,457 creating '/tmp/pip-modern-metadata-xzar55e_/tsarina-0.4.0.dist-info' 2026-04-04T15:26:59,582 Preparing metadata (pyproject.toml): finished with status 'done' 2026-04-04T15:26:59,589 Source in /tmp/pip-wheel-ei1ehjiq/tsarina_4ba8726f0f2d4d30b0a774b11b68d2f6 has version 0.4.0, which satisfies requirement tsarina==0.4.0 from https://files.pythonhosted.org/packages/d3/ef/0c9b610d182828a1d5c269d3483ac9535ea744f2041900559316d8280d29/tsarina-0.4.0.tar.gz 2026-04-04T15:26:59,591 Removed tsarina==0.4.0 from https://files.pythonhosted.org/packages/d3/ef/0c9b610d182828a1d5c269d3483ac9535ea744f2041900559316d8280d29/tsarina-0.4.0.tar.gz from build tracker '/tmp/pip-build-tracker-0rf9ku3z' 2026-04-04T15:26:59,602 Created temporary directory: /tmp/pip-unpack-d9qapqq8 2026-04-04T15:26:59,603 Building wheels for collected packages: tsarina 2026-04-04T15:26:59,607 Created temporary directory: /tmp/pip-wheel-v0d0x1if 2026-04-04T15:26:59,608 Destination directory: /tmp/pip-wheel-v0d0x1if 2026-04-04T15:26:59,610 Building wheel for tsarina (pyproject.toml): started 2026-04-04T15:26:59,611 Running command Building wheel for tsarina (pyproject.toml) 2026-04-04T15:27:00,164 /tmp/pip-build-env-8e4t9oe5/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-04-04T15:27:00,164 !! 2026-04-04T15:27:00,165 ******************************************************************************** 2026-04-04T15:27:00,165 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-04-04T15:27:00,166 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-04-04T15:27:00,167 or your builds will no longer be supported. 2026-04-04T15:27:00,168 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-04T15:27:00,168 ******************************************************************************** 2026-04-04T15:27:00,169 !! 2026-04-04T15:27:00,170 corresp(dist, value, root_dir) 2026-04-04T15:27:00,234 /tmp/pip-build-env-8e4t9oe5/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-04T15:27:00,234 !! 2026-04-04T15:27:00,235 ******************************************************************************** 2026-04-04T15:27:00,236 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-04T15:27:00,237 License :: OSI Approved :: Apache Software License 2026-04-04T15:27:00,238 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-04T15:27:00,239 ******************************************************************************** 2026-04-04T15:27:00,240 !! 2026-04-04T15:27:00,241 dist._finalize_license_expression() 2026-04-04T15:27:00,241 /tmp/pip-build-env-8e4t9oe5/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-04T15:27:00,242 !! 2026-04-04T15:27:00,243 ******************************************************************************** 2026-04-04T15:27:00,244 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-04T15:27:00,245 License :: OSI Approved :: Apache Software License 2026-04-04T15:27:00,246 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-04T15:27:00,247 ******************************************************************************** 2026-04-04T15:27:00,248 !! 2026-04-04T15:27:00,249 self._finalize_license_expression() 2026-04-04T15:27:00,249 running bdist_wheel 2026-04-04T15:27:00,259 running build 2026-04-04T15:27:00,259 running build_py 2026-04-04T15:27:00,266 creating build/lib/tsarina 2026-04-04T15:27:00,268 copying tsarina/scoring.py -> build/lib/tsarina 2026-04-04T15:27:00,270 copying tsarina/mtec.py -> build/lib/tsarina 2026-04-04T15:27:00,272 copying tsarina/cli.py -> build/lib/tsarina 2026-04-04T15:27:00,275 copying tsarina/viral.py -> build/lib/tsarina 2026-04-04T15:27:00,277 copying tsarina/targets.py -> build/lib/tsarina 2026-04-04T15:27:00,280 copying tsarina/downloads.py -> build/lib/tsarina 2026-04-04T15:27:00,282 copying tsarina/evidence.py -> build/lib/tsarina 2026-04-04T15:27:00,284 copying tsarina/perseus.py -> build/lib/tsarina 2026-04-04T15:27:00,287 copying tsarina/partition.py -> build/lib/tsarina 2026-04-04T15:27:00,289 copying tsarina/panels.py -> build/lib/tsarina 2026-04-04T15:27:00,291 copying tsarina/version.py -> build/lib/tsarina 2026-04-04T15:27:00,293 copying tsarina/tissues.py -> build/lib/tsarina 2026-04-04T15:27:00,295 copying tsarina/__init__.py -> build/lib/tsarina 2026-04-04T15:27:00,297 copying tsarina/regions.py -> build/lib/tsarina 2026-04-04T15:27:00,299 copying tsarina/mscuration.py -> build/lib/tsarina 2026-04-04T15:27:00,301 copying tsarina/mutations.py -> build/lib/tsarina 2026-04-04T15:27:00,303 copying tsarina/loader.py -> build/lib/tsarina 2026-04-04T15:27:00,305 copying tsarina/tiers.py -> build/lib/tsarina 2026-04-04T15:27:00,308 copying tsarina/export.py -> build/lib/tsarina 2026-04-04T15:27:00,310 copying tsarina/peptides.py -> build/lib/tsarina 2026-04-04T15:27:00,312 copying tsarina/hpa.py -> build/lib/tsarina 2026-04-04T15:27:00,314 copying tsarina/iedb.py -> build/lib/tsarina 2026-04-04T15:27:00,316 copying tsarina/selection.py -> build/lib/tsarina 2026-04-04T15:27:00,319 copying tsarina/negatives.py -> build/lib/tsarina 2026-04-04T15:27:00,321 copying tsarina/gene_sets.py -> build/lib/tsarina 2026-04-04T15:27:00,323 copying tsarina/alleles.py -> build/lib/tsarina 2026-04-04T15:27:00,326 creating build/lib/tsarina/data 2026-04-04T15:27:00,327 copying tsarina/data/__init__.py -> build/lib/tsarina/data 2026-04-04T15:27:00,328 running egg_info 2026-04-04T15:27:00,338 writing tsarina.egg-info/PKG-INFO 2026-04-04T15:27:00,343 writing dependency_links to tsarina.egg-info/dependency_links.txt 2026-04-04T15:27:00,345 writing entry points to tsarina.egg-info/entry_points.txt 2026-04-04T15:27:00,347 writing requirements to tsarina.egg-info/requires.txt 2026-04-04T15:27:00,348 writing top-level names to tsarina.egg-info/top_level.txt 2026-04-04T15:27:00,359 reading manifest file 'tsarina.egg-info/SOURCES.txt' 2026-04-04T15:27:00,363 reading manifest template 'MANIFEST.in' 2026-04-04T15:27:00,364 adding license file 'LICENSE' 2026-04-04T15:27:00,368 writing manifest file 'tsarina.egg-info/SOURCES.txt' 2026-04-04T15:27:00,372 copying tsarina/data/cancer-testis-antigens.csv -> build/lib/tsarina/data 2026-04-04T15:27:00,388 installing to build/bdist.linux-armv7l/wheel 2026-04-04T15:27:00,388 running install 2026-04-04T15:27:00,411 running install_lib 2026-04-04T15:27:00,417 creating build/bdist.linux-armv7l/wheel 2026-04-04T15:27:00,419 creating build/bdist.linux-armv7l/wheel/tsarina 2026-04-04T15:27:00,421 copying build/lib/tsarina/scoring.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T15:27:00,423 copying build/lib/tsarina/mtec.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T15:27:00,425 copying build/lib/tsarina/cli.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T15:27:00,427 copying build/lib/tsarina/viral.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T15:27:00,430 copying build/lib/tsarina/targets.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T15:27:00,432 copying build/lib/tsarina/downloads.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T15:27:00,434 copying build/lib/tsarina/evidence.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T15:27:00,437 copying build/lib/tsarina/perseus.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T15:27:00,439 copying build/lib/tsarina/partition.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T15:27:00,442 copying build/lib/tsarina/panels.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T15:27:00,444 copying build/lib/tsarina/version.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T15:27:00,446 copying build/lib/tsarina/tissues.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T15:27:00,448 copying build/lib/tsarina/__init__.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T15:27:00,450 copying build/lib/tsarina/regions.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T15:27:00,453 copying build/lib/tsarina/mscuration.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T15:27:00,455 copying build/lib/tsarina/mutations.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T15:27:00,458 copying build/lib/tsarina/loader.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T15:27:00,460 copying build/lib/tsarina/tiers.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T15:27:00,462 copying build/lib/tsarina/export.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T15:27:00,464 copying build/lib/tsarina/peptides.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T15:27:00,466 copying build/lib/tsarina/hpa.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T15:27:00,469 copying build/lib/tsarina/iedb.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T15:27:00,471 copying build/lib/tsarina/selection.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T15:27:00,473 copying build/lib/tsarina/negatives.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T15:27:00,476 copying build/lib/tsarina/gene_sets.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T15:27:00,478 copying build/lib/tsarina/alleles.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T15:27:00,481 creating build/bdist.linux-armv7l/wheel/tsarina/data 2026-04-04T15:27:00,482 copying build/lib/tsarina/data/__init__.py -> build/bdist.linux-armv7l/wheel/./tsarina/data 2026-04-04T15:27:00,484 copying build/lib/tsarina/data/cancer-testis-antigens.csv -> build/bdist.linux-armv7l/wheel/./tsarina/data 2026-04-04T15:27:00,487 running install_egg_info 2026-04-04T15:27:00,492 Copying tsarina.egg-info to build/bdist.linux-armv7l/wheel/./tsarina-0.4.0-py3.11.egg-info 2026-04-04T15:27:00,505 running install_scripts 2026-04-04T15:27:00,518 creating build/bdist.linux-armv7l/wheel/tsarina-0.4.0.dist-info/WHEEL 2026-04-04T15:27:00,521 creating '/tmp/pip-wheel-v0d0x1if/.tmp-zk3usil_/tsarina-0.4.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-04-04T15:27:00,524 adding 'tsarina/__init__.py' 2026-04-04T15:27:00,526 adding 'tsarina/alleles.py' 2026-04-04T15:27:00,527 adding 'tsarina/cli.py' 2026-04-04T15:27:00,529 adding 'tsarina/downloads.py' 2026-04-04T15:27:00,531 adding 'tsarina/evidence.py' 2026-04-04T15:27:00,532 adding 'tsarina/export.py' 2026-04-04T15:27:00,534 adding 'tsarina/gene_sets.py' 2026-04-04T15:27:00,536 adding 'tsarina/hpa.py' 2026-04-04T15:27:00,538 adding 'tsarina/iedb.py' 2026-04-04T15:27:00,540 adding 'tsarina/loader.py' 2026-04-04T15:27:00,541 adding 'tsarina/mscuration.py' 2026-04-04T15:27:00,542 adding 'tsarina/mtec.py' 2026-04-04T15:27:00,545 adding 'tsarina/mutations.py' 2026-04-04T15:27:00,546 adding 'tsarina/negatives.py' 2026-04-04T15:27:00,548 adding 'tsarina/panels.py' 2026-04-04T15:27:00,550 adding 'tsarina/partition.py' 2026-04-04T15:27:00,552 adding 'tsarina/peptides.py' 2026-04-04T15:27:00,554 adding 'tsarina/perseus.py' 2026-04-04T15:27:00,556 adding 'tsarina/regions.py' 2026-04-04T15:27:00,558 adding 'tsarina/scoring.py' 2026-04-04T15:27:00,560 adding 'tsarina/selection.py' 2026-04-04T15:27:00,562 adding 'tsarina/targets.py' 2026-04-04T15:27:00,565 adding 'tsarina/tiers.py' 2026-04-04T15:27:00,566 adding 'tsarina/tissues.py' 2026-04-04T15:27:00,568 adding 'tsarina/version.py' 2026-04-04T15:27:00,570 adding 'tsarina/viral.py' 2026-04-04T15:27:00,572 adding 'tsarina/data/__init__.py' 2026-04-04T15:27:00,581 adding 'tsarina/data/cancer-testis-antigens.csv' 2026-04-04T15:27:00,585 adding 'tsarina-0.4.0.dist-info/licenses/LICENSE' 2026-04-04T15:27:00,589 adding 'tsarina-0.4.0.dist-info/METADATA' 2026-04-04T15:27:00,591 adding 'tsarina-0.4.0.dist-info/WHEEL' 2026-04-04T15:27:00,592 adding 'tsarina-0.4.0.dist-info/entry_points.txt' 2026-04-04T15:27:00,593 adding 'tsarina-0.4.0.dist-info/top_level.txt' 2026-04-04T15:27:00,594 adding 'tsarina-0.4.0.dist-info/RECORD' 2026-04-04T15:27:00,596 removing build/bdist.linux-armv7l/wheel 2026-04-04T15:27:00,704 Building wheel for tsarina (pyproject.toml): finished with status 'done' 2026-04-04T15:27:00,711 Created wheel for tsarina: filename=tsarina-0.4.0-py3-none-any.whl size=96630 sha256=6bd9b5a15a025ecd369b683e4ec3e950bd701dfb88baa94e1c0ca62a6a903c2f 2026-04-04T15:27:00,712 Stored in directory: /tmp/pip-ephem-wheel-cache-6jfbc0u7/wheels/69/f3/6e/ad66d773b09caab9f615597d3c312a21dfa9f31c6fa4d2ea1e 2026-04-04T15:27:00,734 Successfully built tsarina 2026-04-04T15:27:00,740 Removed build tracker: '/tmp/pip-build-tracker-0rf9ku3z'