2026-04-04T19:06:23,943 Created temporary directory: /tmp/pip-ephem-wheel-cache-jj_87ufk 2026-04-04T19:06:23,944 Created temporary directory: /tmp/pip-build-tracker-z48ai7fd 2026-04-04T19:06:23,945 Initialized build tracking at /tmp/pip-build-tracker-z48ai7fd 2026-04-04T19:06:23,946 Created build tracker: /tmp/pip-build-tracker-z48ai7fd 2026-04-04T19:06:23,946 Entered build tracker: /tmp/pip-build-tracker-z48ai7fd 2026-04-04T19:06:23,947 Created temporary directory: /tmp/pip-wheel-zm6g61bl 2026-04-04T19:06:23,950 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-04T19:06:23,952 Created temporary directory: /tmp/pip-ephem-wheel-cache-xjx6nip7 2026-04-04T19:06:23,974 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-04T19:06:23,977 2 location(s) to search for versions of tsarina: 2026-04-04T19:06:23,977 * https://pypi.org/simple/tsarina/ 2026-04-04T19:06:23,977 * https://www.piwheels.org/simple/tsarina/ 2026-04-04T19:06:23,978 Fetching project page and analyzing links: https://pypi.org/simple/tsarina/ 2026-04-04T19:06:23,979 Getting page https://pypi.org/simple/tsarina/ 2026-04-04T19:06:23,980 Found index url https://pypi.org/simple 2026-04-04T19:06:24,206 Fetched page https://pypi.org/simple/tsarina/ as application/vnd.pypi.simple.v1+json 2026-04-04T19:06:24,209 Skipping link: No binaries permitted for tsarina: https://files.pythonhosted.org/packages/69/d6/a5c260bd9cd44e62e845a273028deeeec1903aa31eb6f45a3e6e31359328/tsarina-0.1.0-py3-none-any.whl (from https://pypi.org/simple/tsarina/) (requires-python:>=3.9) 2026-04-04T19:06:24,210 Found link https://files.pythonhosted.org/packages/01/60/c0c2a4e63280cccbbc521815a0922ac4eca54ed11de9c652876513ff5184/tsarina-0.1.0.tar.gz (from https://pypi.org/simple/tsarina/) (requires-python:>=3.9), version: 0.1.0 2026-04-04T19:06:24,210 Skipping link: No binaries permitted for tsarina: https://files.pythonhosted.org/packages/c2/a4/6880e9ce39929e481167b3548edf4f808cf82d4f69293f5c785e6592479c/tsarina-0.2.0-py3-none-any.whl (from https://pypi.org/simple/tsarina/) (requires-python:>=3.9) 2026-04-04T19:06:24,212 Found link https://files.pythonhosted.org/packages/c9/56/277faedaf2e8def927886ad8f2432a048554085525c442f42f12e066dee4/tsarina-0.2.0.tar.gz (from https://pypi.org/simple/tsarina/) (requires-python:>=3.9), version: 0.2.0 2026-04-04T19:06:24,212 Skipping link: No binaries permitted for tsarina: https://files.pythonhosted.org/packages/55/40/9b8d8faec5efcd729bdedfdd06c1a3960e944d89aaf0453a6419b15b60ce/tsarina-0.3.0-py3-none-any.whl (from https://pypi.org/simple/tsarina/) (requires-python:>=3.9) 2026-04-04T19:06:24,213 Found link https://files.pythonhosted.org/packages/10/65/0a5adf206bfda470745992534faabe7ec229f5a59e02c2b0644a973038b6/tsarina-0.3.0.tar.gz (from https://pypi.org/simple/tsarina/) (requires-python:>=3.9), version: 0.3.0 2026-04-04T19:06:24,214 Skipping link: No binaries permitted for tsarina: https://files.pythonhosted.org/packages/88/b8/87852e80c98b160a92872a7b31611a35a7d52c6d698b1da869ac81905f90/tsarina-0.4.0-py3-none-any.whl (from https://pypi.org/simple/tsarina/) (requires-python:>=3.9) 2026-04-04T19:06:24,215 Found link https://files.pythonhosted.org/packages/d3/ef/0c9b610d182828a1d5c269d3483ac9535ea744f2041900559316d8280d29/tsarina-0.4.0.tar.gz (from https://pypi.org/simple/tsarina/) (requires-python:>=3.9), version: 0.4.0 2026-04-04T19:06:24,216 Skipping link: No binaries permitted for tsarina: https://files.pythonhosted.org/packages/bb/56/e83d7fb4509d5be994a51fa3fdfad0933604cb700a868823c9e684aa9e0f/tsarina-0.4.1-py3-none-any.whl (from https://pypi.org/simple/tsarina/) (requires-python:>=3.9) 2026-04-04T19:06:24,217 Found link https://files.pythonhosted.org/packages/07/8f/47c8fb8b1c4c0d6bab289cdf2ebb019e6d40870a86d064de86c1057bfd94/tsarina-0.4.1.tar.gz (from https://pypi.org/simple/tsarina/) (requires-python:>=3.9), version: 0.4.1 2026-04-04T19:06:24,218 Fetching project page and analyzing links: https://www.piwheels.org/simple/tsarina/ 2026-04-04T19:06:24,218 Getting page https://www.piwheels.org/simple/tsarina/ 2026-04-04T19:06:24,219 Found index url https://www.piwheels.org/simple 2026-04-04T19:06:24,436 Fetched page https://www.piwheels.org/simple/tsarina/ as text/html 2026-04-04T19:06:24,438 Skipping link: No binaries permitted for tsarina: https://www.piwheels.org/simple/tsarina/tsarina-0.4.0-py3-none-any.whl#sha256=6bd9b5a15a025ecd369b683e4ec3e950bd701dfb88baa94e1c0ca62a6a903c2f (from https://www.piwheels.org/simple/tsarina/) (requires-python:>=3.9) 2026-04-04T19:06:24,439 Skipping link: No binaries permitted for tsarina: https://www.piwheels.org/simple/tsarina/tsarina-0.3.0-py3-none-any.whl#sha256=8da4a3031c799223242e74126458402fa01844057d9e9d0e235293aa0ec5ebe5 (from https://www.piwheels.org/simple/tsarina/) (requires-python:>=3.9) 2026-04-04T19:06:24,439 Skipping link: No binaries permitted for tsarina: https://www.piwheels.org/simple/tsarina/tsarina-0.2.0-py3-none-any.whl#sha256=ba31fc6c43197b9953ac3b7d22ddf0ac762d27d8d33df990dec5932ac9069e24 (from https://www.piwheels.org/simple/tsarina/) (requires-python:>=3.9) 2026-04-04T19:06:24,440 Skipping link: No binaries permitted for tsarina: https://www.piwheels.org/simple/tsarina/tsarina-0.1.0-py3-none-any.whl#sha256=b5fa745fb65518f371df272095b61fc69026ef66259d771b76be3a4cc66bd1f3 (from https://www.piwheels.org/simple/tsarina/) (requires-python:>=3.9) 2026-04-04T19:06:24,440 Skipping link: not a file: https://www.piwheels.org/simple/tsarina/ 2026-04-04T19:06:24,441 Skipping link: not a file: https://pypi.org/simple/tsarina/ 2026-04-04T19:06:24,462 Given no hashes to check 1 links for project 'tsarina': discarding no candidates 2026-04-04T19:06:24,481 Collecting tsarina==0.4.1 2026-04-04T19:06:24,483 Created temporary directory: /tmp/pip-unpack-mlkm74u0 2026-04-04T19:06:24,707 Downloading tsarina-0.4.1.tar.gz (95 kB) 2026-04-04T19:06:24,891 Added tsarina==0.4.1 from https://files.pythonhosted.org/packages/07/8f/47c8fb8b1c4c0d6bab289cdf2ebb019e6d40870a86d064de86c1057bfd94/tsarina-0.4.1.tar.gz to build tracker '/tmp/pip-build-tracker-z48ai7fd' 2026-04-04T19:06:24,897 Created temporary directory: /tmp/pip-build-env-w47a_qjm 2026-04-04T19:06:24,902 Installing build dependencies: started 2026-04-04T19:06:24,903 Running command pip subprocess to install build dependencies 2026-04-04T19:06:26,027 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-04-04T19:06:26,463 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-04T19:06:26,485 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-04T19:06:28,248 Collecting setuptools>=61.0 2026-04-04T19:06:28,338 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-04-04T19:06:28,604 Collecting wheel 2026-04-04T19:06:28,619 Using cached https://www.piwheels.org/simple/wheel/wheel-0.46.3-py3-none-any.whl (30 kB) 2026-04-04T19:06:28,805 Collecting packaging>=24.0 2026-04-04T19:06:28,822 Using cached https://www.piwheels.org/simple/packaging/packaging-26.0-py3-none-any.whl (74 kB) 2026-04-04T19:06:31,760 Installing collected packages: setuptools, packaging, wheel 2026-04-04T19:06:35,244 Creating /tmp/pip-build-env-w47a_qjm/overlay/local/bin 2026-04-04T19:06:35,246 changing mode of /tmp/pip-build-env-w47a_qjm/overlay/local/bin/wheel to 755 2026-04-04T19:06:35,267 Successfully installed packaging-26.0 setuptools-82.0.1 wheel-0.46.3 2026-04-04T19:06:35,546 Installing build dependencies: finished with status 'done' 2026-04-04T19:06:35,552 Getting requirements to build wheel: started 2026-04-04T19:06:35,554 Running command Getting requirements to build wheel 2026-04-04T19:06:36,150 /tmp/pip-build-env-w47a_qjm/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-04-04T19:06:36,150 !! 2026-04-04T19:06:36,151 ******************************************************************************** 2026-04-04T19:06:36,152 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-04-04T19:06:36,152 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-04-04T19:06:36,153 or your builds will no longer be supported. 2026-04-04T19:06:36,154 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-04T19:06:36,154 ******************************************************************************** 2026-04-04T19:06:36,155 !! 2026-04-04T19:06:36,155 corresp(dist, value, root_dir) 2026-04-04T19:06:36,229 /tmp/pip-build-env-w47a_qjm/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-04T19:06:36,229 !! 2026-04-04T19:06:36,230 ******************************************************************************** 2026-04-04T19:06:36,231 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-04T19:06:36,232 License :: OSI Approved :: Apache Software License 2026-04-04T19:06:36,233 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-04T19:06:36,234 ******************************************************************************** 2026-04-04T19:06:36,235 !! 2026-04-04T19:06:36,236 dist._finalize_license_expression() 2026-04-04T19:06:36,237 /tmp/pip-build-env-w47a_qjm/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-04T19:06:36,237 !! 2026-04-04T19:06:36,239 ******************************************************************************** 2026-04-04T19:06:36,239 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-04T19:06:36,241 License :: OSI Approved :: Apache Software License 2026-04-04T19:06:36,242 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-04T19:06:36,242 ******************************************************************************** 2026-04-04T19:06:36,243 !! 2026-04-04T19:06:36,244 self._finalize_license_expression() 2026-04-04T19:06:36,244 running egg_info 2026-04-04T19:06:36,248 writing tsarina.egg-info/PKG-INFO 2026-04-04T19:06:36,254 writing dependency_links to tsarina.egg-info/dependency_links.txt 2026-04-04T19:06:36,256 writing entry points to tsarina.egg-info/entry_points.txt 2026-04-04T19:06:36,258 writing requirements to tsarina.egg-info/requires.txt 2026-04-04T19:06:36,260 writing top-level names to tsarina.egg-info/top_level.txt 2026-04-04T19:06:36,282 reading manifest file 'tsarina.egg-info/SOURCES.txt' 2026-04-04T19:06:36,286 reading manifest template 'MANIFEST.in' 2026-04-04T19:06:36,287 adding license file 'LICENSE' 2026-04-04T19:06:36,291 writing manifest file 'tsarina.egg-info/SOURCES.txt' 2026-04-04T19:06:36,389 Getting requirements to build wheel: finished with status 'done' 2026-04-04T19:06:36,392 Created temporary directory: /tmp/pip-modern-metadata-k__vq25q 2026-04-04T19:06:36,395 Preparing metadata (pyproject.toml): started 2026-04-04T19:06:36,396 Running command Preparing metadata (pyproject.toml) 2026-04-04T19:06:36,966 /tmp/pip-build-env-w47a_qjm/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-04-04T19:06:36,967 !! 2026-04-04T19:06:36,968 ******************************************************************************** 2026-04-04T19:06:36,968 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-04-04T19:06:36,969 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-04-04T19:06:36,969 or your builds will no longer be supported. 2026-04-04T19:06:36,970 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-04T19:06:36,971 ******************************************************************************** 2026-04-04T19:06:36,972 !! 2026-04-04T19:06:36,972 corresp(dist, value, root_dir) 2026-04-04T19:06:37,043 /tmp/pip-build-env-w47a_qjm/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-04T19:06:37,043 !! 2026-04-04T19:06:37,044 ******************************************************************************** 2026-04-04T19:06:37,045 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-04T19:06:37,046 License :: OSI Approved :: Apache Software License 2026-04-04T19:06:37,047 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-04T19:06:37,047 ******************************************************************************** 2026-04-04T19:06:37,049 !! 2026-04-04T19:06:37,049 dist._finalize_license_expression() 2026-04-04T19:06:37,050 /tmp/pip-build-env-w47a_qjm/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-04T19:06:37,051 !! 2026-04-04T19:06:37,052 ******************************************************************************** 2026-04-04T19:06:37,052 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-04T19:06:37,054 License :: OSI Approved :: Apache Software License 2026-04-04T19:06:37,055 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-04T19:06:37,056 ******************************************************************************** 2026-04-04T19:06:37,057 !! 2026-04-04T19:06:37,057 self._finalize_license_expression() 2026-04-04T19:06:37,058 running dist_info 2026-04-04T19:06:37,065 creating /tmp/pip-modern-metadata-k__vq25q/tsarina.egg-info 2026-04-04T19:06:37,066 writing /tmp/pip-modern-metadata-k__vq25q/tsarina.egg-info/PKG-INFO 2026-04-04T19:06:37,072 writing dependency_links to /tmp/pip-modern-metadata-k__vq25q/tsarina.egg-info/dependency_links.txt 2026-04-04T19:06:37,074 writing entry points to /tmp/pip-modern-metadata-k__vq25q/tsarina.egg-info/entry_points.txt 2026-04-04T19:06:37,076 writing requirements to /tmp/pip-modern-metadata-k__vq25q/tsarina.egg-info/requires.txt 2026-04-04T19:06:37,077 writing top-level names to /tmp/pip-modern-metadata-k__vq25q/tsarina.egg-info/top_level.txt 2026-04-04T19:06:37,079 writing manifest file '/tmp/pip-modern-metadata-k__vq25q/tsarina.egg-info/SOURCES.txt' 2026-04-04T19:06:37,099 reading manifest file '/tmp/pip-modern-metadata-k__vq25q/tsarina.egg-info/SOURCES.txt' 2026-04-04T19:06:37,101 reading manifest template 'MANIFEST.in' 2026-04-04T19:06:37,102 adding license file 'LICENSE' 2026-04-04T19:06:37,106 writing manifest file '/tmp/pip-modern-metadata-k__vq25q/tsarina.egg-info/SOURCES.txt' 2026-04-04T19:06:37,107 creating '/tmp/pip-modern-metadata-k__vq25q/tsarina-0.4.1.dist-info' 2026-04-04T19:06:37,231 Preparing metadata (pyproject.toml): finished with status 'done' 2026-04-04T19:06:37,239 Source in /tmp/pip-wheel-zm6g61bl/tsarina_6115dac34ef44bc7afddefb524f630e0 has version 0.4.1, which satisfies requirement tsarina==0.4.1 from https://files.pythonhosted.org/packages/07/8f/47c8fb8b1c4c0d6bab289cdf2ebb019e6d40870a86d064de86c1057bfd94/tsarina-0.4.1.tar.gz 2026-04-04T19:06:37,240 Removed tsarina==0.4.1 from https://files.pythonhosted.org/packages/07/8f/47c8fb8b1c4c0d6bab289cdf2ebb019e6d40870a86d064de86c1057bfd94/tsarina-0.4.1.tar.gz from build tracker '/tmp/pip-build-tracker-z48ai7fd' 2026-04-04T19:06:37,251 Created temporary directory: /tmp/pip-unpack-poay1ypm 2026-04-04T19:06:37,252 Building wheels for collected packages: tsarina 2026-04-04T19:06:37,256 Created temporary directory: /tmp/pip-wheel-57711rrc 2026-04-04T19:06:37,257 Destination directory: /tmp/pip-wheel-57711rrc 2026-04-04T19:06:37,259 Building wheel for tsarina (pyproject.toml): started 2026-04-04T19:06:37,260 Running command Building wheel for tsarina (pyproject.toml) 2026-04-04T19:06:37,895 /tmp/pip-build-env-w47a_qjm/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-04-04T19:06:37,895 !! 2026-04-04T19:06:37,896 ******************************************************************************** 2026-04-04T19:06:37,897 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-04-04T19:06:37,898 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-04-04T19:06:37,899 or your builds will no longer be supported. 2026-04-04T19:06:37,900 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-04T19:06:37,900 ******************************************************************************** 2026-04-04T19:06:37,902 !! 2026-04-04T19:06:37,902 corresp(dist, value, root_dir) 2026-04-04T19:06:37,965 /tmp/pip-build-env-w47a_qjm/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-04T19:06:37,966 !! 2026-04-04T19:06:37,967 ******************************************************************************** 2026-04-04T19:06:37,968 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-04T19:06:37,969 License :: OSI Approved :: Apache Software License 2026-04-04T19:06:37,970 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-04T19:06:37,971 ******************************************************************************** 2026-04-04T19:06:37,972 !! 2026-04-04T19:06:37,972 dist._finalize_license_expression() 2026-04-04T19:06:37,973 /tmp/pip-build-env-w47a_qjm/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-04T19:06:37,974 !! 2026-04-04T19:06:37,975 ******************************************************************************** 2026-04-04T19:06:37,975 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-04T19:06:37,976 License :: OSI Approved :: Apache Software License 2026-04-04T19:06:37,978 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-04T19:06:37,978 ******************************************************************************** 2026-04-04T19:06:37,980 !! 2026-04-04T19:06:37,980 self._finalize_license_expression() 2026-04-04T19:06:37,981 running bdist_wheel 2026-04-04T19:06:37,991 running build 2026-04-04T19:06:37,991 running build_py 2026-04-04T19:06:37,998 creating build/lib/tsarina 2026-04-04T19:06:38,000 copying tsarina/evidence.py -> build/lib/tsarina 2026-04-04T19:06:38,003 copying tsarina/negatives.py -> build/lib/tsarina 2026-04-04T19:06:38,005 copying tsarina/scoring.py -> build/lib/tsarina 2026-04-04T19:06:38,008 copying tsarina/loader.py -> build/lib/tsarina 2026-04-04T19:06:38,010 copying tsarina/perseus.py -> build/lib/tsarina 2026-04-04T19:06:38,012 copying tsarina/partition.py -> build/lib/tsarina 2026-04-04T19:06:38,014 copying tsarina/export.py -> build/lib/tsarina 2026-04-04T19:06:38,016 copying tsarina/hpa.py -> build/lib/tsarina 2026-04-04T19:06:38,018 copying tsarina/selection.py -> build/lib/tsarina 2026-04-04T19:06:38,021 copying tsarina/viral.py -> build/lib/tsarina 2026-04-04T19:06:38,023 copying tsarina/__init__.py -> build/lib/tsarina 2026-04-04T19:06:38,025 copying tsarina/iedb.py -> build/lib/tsarina 2026-04-04T19:06:38,027 copying tsarina/gene_sets.py -> build/lib/tsarina 2026-04-04T19:06:38,030 copying tsarina/targets.py -> build/lib/tsarina 2026-04-04T19:06:38,032 copying tsarina/alleles.py -> build/lib/tsarina 2026-04-04T19:06:38,034 copying tsarina/version.py -> build/lib/tsarina 2026-04-04T19:06:38,036 copying tsarina/regions.py -> build/lib/tsarina 2026-04-04T19:06:38,039 copying tsarina/mtec.py -> build/lib/tsarina 2026-04-04T19:06:38,041 copying tsarina/mutations.py -> build/lib/tsarina 2026-04-04T19:06:38,043 copying tsarina/panels.py -> build/lib/tsarina 2026-04-04T19:06:38,045 copying tsarina/peptides.py -> build/lib/tsarina 2026-04-04T19:06:38,047 copying tsarina/downloads.py -> build/lib/tsarina 2026-04-04T19:06:38,049 copying tsarina/tissues.py -> build/lib/tsarina 2026-04-04T19:06:38,051 copying tsarina/tiers.py -> build/lib/tsarina 2026-04-04T19:06:38,054 copying tsarina/cli.py -> build/lib/tsarina 2026-04-04T19:06:38,056 copying tsarina/mscuration.py -> build/lib/tsarina 2026-04-04T19:06:38,059 creating build/lib/tsarina/data 2026-04-04T19:06:38,060 copying tsarina/data/__init__.py -> build/lib/tsarina/data 2026-04-04T19:06:38,062 running egg_info 2026-04-04T19:06:38,073 writing tsarina.egg-info/PKG-INFO 2026-04-04T19:06:38,079 writing dependency_links to tsarina.egg-info/dependency_links.txt 2026-04-04T19:06:38,080 writing entry points to tsarina.egg-info/entry_points.txt 2026-04-04T19:06:38,082 writing requirements to tsarina.egg-info/requires.txt 2026-04-04T19:06:38,083 writing top-level names to tsarina.egg-info/top_level.txt 2026-04-04T19:06:38,095 reading manifest file 'tsarina.egg-info/SOURCES.txt' 2026-04-04T19:06:38,099 reading manifest template 'MANIFEST.in' 2026-04-04T19:06:38,101 adding license file 'LICENSE' 2026-04-04T19:06:38,105 writing manifest file 'tsarina.egg-info/SOURCES.txt' 2026-04-04T19:06:38,110 copying tsarina/data/cancer-testis-antigens.csv -> build/lib/tsarina/data 2026-04-04T19:06:38,125 installing to build/bdist.linux-armv7l/wheel 2026-04-04T19:06:38,125 running install 2026-04-04T19:06:38,151 running install_lib 2026-04-04T19:06:38,157 creating build/bdist.linux-armv7l/wheel 2026-04-04T19:06:38,160 creating build/bdist.linux-armv7l/wheel/tsarina 2026-04-04T19:06:38,161 copying build/lib/tsarina/evidence.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T19:06:38,164 copying build/lib/tsarina/negatives.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T19:06:38,166 copying build/lib/tsarina/scoring.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T19:06:38,169 copying build/lib/tsarina/loader.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T19:06:38,170 copying build/lib/tsarina/perseus.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T19:06:38,173 copying build/lib/tsarina/partition.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T19:06:38,175 copying build/lib/tsarina/export.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T19:06:38,177 copying build/lib/tsarina/hpa.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T19:06:38,179 copying build/lib/tsarina/selection.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T19:06:38,181 copying build/lib/tsarina/viral.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T19:06:38,183 copying build/lib/tsarina/__init__.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T19:06:38,185 copying build/lib/tsarina/iedb.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T19:06:38,187 copying build/lib/tsarina/gene_sets.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T19:06:38,190 copying build/lib/tsarina/targets.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T19:06:38,192 creating build/bdist.linux-armv7l/wheel/tsarina/data 2026-04-04T19:06:38,194 copying build/lib/tsarina/data/__init__.py -> build/bdist.linux-armv7l/wheel/./tsarina/data 2026-04-04T19:06:38,195 copying build/lib/tsarina/data/cancer-testis-antigens.csv -> build/bdist.linux-armv7l/wheel/./tsarina/data 2026-04-04T19:06:38,199 copying build/lib/tsarina/alleles.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T19:06:38,201 copying build/lib/tsarina/version.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T19:06:38,203 copying build/lib/tsarina/regions.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T19:06:38,206 copying build/lib/tsarina/mtec.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T19:06:38,208 copying build/lib/tsarina/mutations.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T19:06:38,211 copying build/lib/tsarina/panels.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T19:06:38,213 copying build/lib/tsarina/peptides.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T19:06:38,215 copying build/lib/tsarina/downloads.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T19:06:38,217 copying build/lib/tsarina/tissues.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T19:06:38,219 copying build/lib/tsarina/tiers.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T19:06:38,221 copying build/lib/tsarina/cli.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T19:06:38,224 copying build/lib/tsarina/mscuration.py -> build/bdist.linux-armv7l/wheel/./tsarina 2026-04-04T19:06:38,225 running install_egg_info 2026-04-04T19:06:38,230 Copying tsarina.egg-info to build/bdist.linux-armv7l/wheel/./tsarina-0.4.1-py3.11.egg-info 2026-04-04T19:06:38,243 running install_scripts 2026-04-04T19:06:38,257 creating build/bdist.linux-armv7l/wheel/tsarina-0.4.1.dist-info/WHEEL 2026-04-04T19:06:38,260 creating '/tmp/pip-wheel-57711rrc/.tmp-bszzksel/tsarina-0.4.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-04-04T19:06:38,262 adding 'tsarina/__init__.py' 2026-04-04T19:06:38,264 adding 'tsarina/alleles.py' 2026-04-04T19:06:38,266 adding 'tsarina/cli.py' 2026-04-04T19:06:38,268 adding 'tsarina/downloads.py' 2026-04-04T19:06:38,270 adding 'tsarina/evidence.py' 2026-04-04T19:06:38,271 adding 'tsarina/export.py' 2026-04-04T19:06:38,273 adding 'tsarina/gene_sets.py' 2026-04-04T19:06:38,276 adding 'tsarina/hpa.py' 2026-04-04T19:06:38,278 adding 'tsarina/iedb.py' 2026-04-04T19:06:38,280 adding 'tsarina/loader.py' 2026-04-04T19:06:38,281 adding 'tsarina/mscuration.py' 2026-04-04T19:06:38,282 adding 'tsarina/mtec.py' 2026-04-04T19:06:38,285 adding 'tsarina/mutations.py' 2026-04-04T19:06:38,287 adding 'tsarina/negatives.py' 2026-04-04T19:06:38,289 adding 'tsarina/panels.py' 2026-04-04T19:06:38,290 adding 'tsarina/partition.py' 2026-04-04T19:06:38,292 adding 'tsarina/peptides.py' 2026-04-04T19:06:38,294 adding 'tsarina/perseus.py' 2026-04-04T19:06:38,297 adding 'tsarina/regions.py' 2026-04-04T19:06:38,300 adding 'tsarina/scoring.py' 2026-04-04T19:06:38,301 adding 'tsarina/selection.py' 2026-04-04T19:06:38,303 adding 'tsarina/targets.py' 2026-04-04T19:06:38,306 adding 'tsarina/tiers.py' 2026-04-04T19:06:38,308 adding 'tsarina/tissues.py' 2026-04-04T19:06:38,309 adding 'tsarina/version.py' 2026-04-04T19:06:38,312 adding 'tsarina/viral.py' 2026-04-04T19:06:38,313 adding 'tsarina/data/__init__.py' 2026-04-04T19:06:38,322 adding 'tsarina/data/cancer-testis-antigens.csv' 2026-04-04T19:06:38,326 adding 'tsarina-0.4.1.dist-info/licenses/LICENSE' 2026-04-04T19:06:38,330 adding 'tsarina-0.4.1.dist-info/METADATA' 2026-04-04T19:06:38,332 adding 'tsarina-0.4.1.dist-info/WHEEL' 2026-04-04T19:06:38,333 adding 'tsarina-0.4.1.dist-info/entry_points.txt' 2026-04-04T19:06:38,333 adding 'tsarina-0.4.1.dist-info/top_level.txt' 2026-04-04T19:06:38,334 adding 'tsarina-0.4.1.dist-info/RECORD' 2026-04-04T19:06:38,337 removing build/bdist.linux-armv7l/wheel 2026-04-04T19:06:38,447 Building wheel for tsarina (pyproject.toml): finished with status 'done' 2026-04-04T19:06:38,456 Created wheel for tsarina: filename=tsarina-0.4.1-py3-none-any.whl size=96772 sha256=4cc83436ab386fdb71a8706888328abf9d728c5186b2ddba3246c87413d95c61 2026-04-04T19:06:38,458 Stored in directory: /tmp/pip-ephem-wheel-cache-xjx6nip7/wheels/54/c8/03/69d73b7caeef9458d798dd478da4eccffd1a9f12861d8eaf8e 2026-04-04T19:06:38,488 Successfully built tsarina 2026-04-04T19:06:38,496 Removed build tracker: '/tmp/pip-build-tracker-z48ai7fd'