2026-04-07T14:02:32,741 Created temporary directory: /tmp/pip-ephem-wheel-cache-5c0p80pk 2026-04-07T14:02:32,743 Created temporary directory: /tmp/pip-build-tracker-ep34adlp 2026-04-07T14:02:32,744 Initialized build tracking at /tmp/pip-build-tracker-ep34adlp 2026-04-07T14:02:32,744 Created build tracker: /tmp/pip-build-tracker-ep34adlp 2026-04-07T14:02:32,745 Entered build tracker: /tmp/pip-build-tracker-ep34adlp 2026-04-07T14:02:32,745 Created temporary directory: /tmp/pip-wheel-iizuwuqd 2026-04-07T14:02:32,748 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-07T14:02:32,751 Created temporary directory: /tmp/pip-ephem-wheel-cache-1isqtw94 2026-04-07T14:02:32,776 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-07T14:02:32,779 2 location(s) to search for versions of pirlygenes: 2026-04-07T14:02:32,779 * https://pypi.org/simple/pirlygenes/ 2026-04-07T14:02:32,779 * https://www.piwheels.org/simple/pirlygenes/ 2026-04-07T14:02:32,780 Fetching project page and analyzing links: https://pypi.org/simple/pirlygenes/ 2026-04-07T14:02:32,781 Getting page https://pypi.org/simple/pirlygenes/ 2026-04-07T14:02:32,782 Found index url https://pypi.org/simple 2026-04-07T14:02:33,011 Fetched page https://pypi.org/simple/pirlygenes/ as application/vnd.pypi.simple.v1+json 2026-04-07T14:02:33,021 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/2e/66/a994711ece0c32dc4037b2c20acb069375f8eb2c80bdcca3a9efa47fdaee/pirlygenes-1.7.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,022 Found link https://files.pythonhosted.org/packages/17/fe/bcdacc3535105e4aed789ffd67937b0a725f5eaf16e19e2d70d7d9994985/pirlygenes-1.7.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 1.7.0 2026-04-07T14:02:33,023 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/59/b0/3e2df98a4c7e570e430d5a43b78c4325669dc94f670df919535730ad97e4/pirlygenes-1.8.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,024 Found link https://files.pythonhosted.org/packages/4b/7c/57808dd823cb43e0775fef54e28607a61d6e34549ef6c21f02e85567e13a/pirlygenes-1.8.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 1.8.0 2026-04-07T14:02:33,025 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/9a/8d/f18f1d145c3cc415d28137493c5cb8e758516d9ac9633fc74cb4f86a318a/pirlygenes-1.8.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,026 Found link https://files.pythonhosted.org/packages/61/0c/c3f0aff27c3758ba3f3ee1f4a63a05238e02043251af230032d9ba555624/pirlygenes-1.8.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 1.8.1 2026-04-07T14:02:33,027 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/24/35/2c1111a823202625bf5719038d745faaa60ed3613bc790db7a365d0d9e91/pirlygenes-1.9.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,028 Found link https://files.pythonhosted.org/packages/00/21/33762d0e1497cb8f52920f8804591991b077145275a9bb472d54cb34bd3b/pirlygenes-1.9.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 1.9.0 2026-04-07T14:02:33,028 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/da/14/c0e64534396352276e63b247458c9b5db4f43c4d36ecba3f447203f1bed8/pirlygenes-2.0.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,029 Found link https://files.pythonhosted.org/packages/1a/15/da113c10028ce6cef9359672f0d6309ef13174410f74bd641ab56fe968e1/pirlygenes-2.0.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.0.0 2026-04-07T14:02:33,030 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/ef/67/1ca24d76bbfbb8547103f0c887d0215b8689b9d68ca03b8e63245446d85f/pirlygenes-2.0.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,031 Found link https://files.pythonhosted.org/packages/f0/57/519f98c3e3ce7414973c34a35b56e0123e63c2397c1c28a40f52096110e8/pirlygenes-2.0.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.0.1 2026-04-07T14:02:33,032 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/b2/a5/eb85bc710dc92ed90930681df0d0727ba7c8adce5f597218b60c8e749abb/pirlygenes-2.1.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,033 Found link https://files.pythonhosted.org/packages/ac/1c/535ab059a16f501c104975a9afdbe26292625c5f6b4565dfaff29827dae5/pirlygenes-2.1.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.1.0 2026-04-07T14:02:33,033 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/31/67/9fb299b51b80ea11807d6cca24343e9b5bcd4f343f5590f443f4ab27d256/pirlygenes-2.2.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,034 Found link https://files.pythonhosted.org/packages/de/bc/dcd2f53a5eb6548d7c18e70463efb3f452b5d8baacde0faf0c91fe00ce06/pirlygenes-2.2.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.2.0 2026-04-07T14:02:33,035 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/4d/d7/cc21525563dbe1ac4f165f25a3e301a8a8547316b959381b70653d000f17/pirlygenes-2.2.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,036 Found link https://files.pythonhosted.org/packages/1b/ca/c2c092e3d7b516325863b5b1d57c5be9837f8e60557858ef52efb985aa0d/pirlygenes-2.2.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.2.1 2026-04-07T14:02:33,037 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/23/eb/83f7d6be1025085e7c29efc3a3d0e5ba1adab69b03202b425503da5e13b6/pirlygenes-2.3.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,038 Found link https://files.pythonhosted.org/packages/1d/8f/3303633fa1cf06d5ca29da10eda17f6a15dc63ab6409a2a44d7c2c0c0ecb/pirlygenes-2.3.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.3.0 2026-04-07T14:02:33,038 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/72/59/5cb1b74270e4b9f43f9db46affd988d079371b6a7fd5ac939bfd8a90550e/pirlygenes-2.3.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,039 Found link https://files.pythonhosted.org/packages/53/f7/8cb01c8ddf2b85a258c021c1e4fe367a3221132c44293a5fcf3f15d6f332/pirlygenes-2.3.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.3.1 2026-04-07T14:02:33,040 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/8a/44/da6370091aea72fec9b67e936a15ae4ebdf9dff908aa9d19047e94159d04/pirlygenes-2.3.2-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,041 Found link https://files.pythonhosted.org/packages/10/a9/907cc4508814906e8c990c01f4f5a8e876d8494a06e48b3231bc8cb0fc76/pirlygenes-2.3.2.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.3.2 2026-04-07T14:02:33,042 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/3f/b6/830da154d45d5ac46ae4fec7615e8cad6fdc54a8977e3ad5d5b719b3e381/pirlygenes-2.4.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,042 Found link https://files.pythonhosted.org/packages/72/cb/85849617feaf50f329a0545583033d697e353ad48f34484f70c94a38a7fe/pirlygenes-2.4.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.4.0 2026-04-07T14:02:33,043 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/03/65/848fbf13686f897447a15f7253d01911214fcbdcf291f647e00c00f9fdbb/pirlygenes-2.4.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,044 Found link https://files.pythonhosted.org/packages/45/7f/c57a8646cfb684413ba4687e8c8727cbe8dd7debc4a84bf211a9e5ffeaa5/pirlygenes-2.4.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.4.1 2026-04-07T14:02:33,045 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/cd/76/2eab340e9647df83214ba9b206adaabd25ee29a39b0602dab5ef5f05675c/pirlygenes-2.4.2-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,046 Found link https://files.pythonhosted.org/packages/6a/f7/cd7bb912ebd9a8fd5678378444dd4cbf57614f841b83aca8d8ae68221512/pirlygenes-2.4.2.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.4.2 2026-04-07T14:02:33,046 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/06/ba/c6259e141db6ae01ab36e9b24878291184fa9551fbba7d8cc122d162370a/pirlygenes-2.5.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,047 Found link https://files.pythonhosted.org/packages/2a/02/a683073293d6e1567e993c5ddeb5b4f20cecf9c143b7c34ca69c6b0fe0bf/pirlygenes-2.5.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.5.0 2026-04-07T14:02:33,048 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/3b/3a/d237a82d8794a11a26a1ef9bfff88a11e9bdf47b1f6505e328954ced2b0e/pirlygenes-2.5.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,049 Found link https://files.pythonhosted.org/packages/b5/e2/879e92ab87381e4ef635263624155d4f2331588bc05aea8a223225f108f7/pirlygenes-2.5.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.5.1 2026-04-07T14:02:33,049 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/a4/c0/3c64fac1cdedad5802d2905b10f836c5a5d805a9dc0d0beeda285a065df3/pirlygenes-2.6.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,050 Found link https://files.pythonhosted.org/packages/2a/df/7ffd654f123a21c608210fe4ed416bda8e56ceb36743d27a8fa4b9eace1e/pirlygenes-2.6.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.6.0 2026-04-07T14:02:33,051 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/f0/d2/7ffa0b7cc699219de0878a38a56a56cdae06b1ca3c9ff50044206427a807/pirlygenes-2.6.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,052 Found link https://files.pythonhosted.org/packages/f6/b2/938ef2e7e5d2a6bee6875aeeb1ed25157d2cdbec1b11345a753cd45565e5/pirlygenes-2.6.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.6.1 2026-04-07T14:02:33,052 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/7b/fb/bc52d124faa5327f959bd76cc38660bc2a83aecb0407925ea1049ef3959b/pirlygenes-2.7.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,053 Found link https://files.pythonhosted.org/packages/15/67/d13b9f14153a2b9aea2b84de47f2e83691875d365f34778b508481422836/pirlygenes-2.7.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.7.0 2026-04-07T14:02:33,054 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/57/7c/f087e5968735238e4782164c5af185405be0eec060121b61c187f5c55429/pirlygenes-2.7.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,055 Found link https://files.pythonhosted.org/packages/0a/9f/6f1a18016493c71ae63b236e4e5186535b85f15188b969cfded686dec47a/pirlygenes-2.7.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.7.1 2026-04-07T14:02:33,056 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/34/d6/ffd2ae0d7511cb22ee2b857520a19acb21ff834f8d8baaa2e70c4c542d7f/pirlygenes-2.8.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,057 Found link https://files.pythonhosted.org/packages/33/84/8cd197f6dc1169477bc562d9d667a30ccb0488747c3fe5682e91dea7e16c/pirlygenes-2.8.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.8.0 2026-04-07T14:02:33,057 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/df/83/41cf7cc0aae6cbf96bcc5855f77b43c27aa675f949ddf382f85607a078cb/pirlygenes-2.8.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,058 Found link https://files.pythonhosted.org/packages/e2/74/d3dfac2a8085a1705b93a8e24b5e3112b3c27610b10f53a19294ccf89926/pirlygenes-2.8.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.8.1 2026-04-07T14:02:33,059 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/9b/8f/cd34cbadb7b38a6a974763069dd07bb780d1c82337fa1c9400bee98978f8/pirlygenes-2.9.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,059 Found link https://files.pythonhosted.org/packages/70/9e/1157f5be862f2934c4601e58c170f604ec09a41f39353e19db0cfabd3747/pirlygenes-2.9.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.9.0 2026-04-07T14:02:33,060 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/6b/80/dfbdeb2a06952345e1a272f55eea07270f41c478be600056c0df5b0271d6/pirlygenes-2.10.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,061 Found link https://files.pythonhosted.org/packages/16/66/a9669f568842a86ec7b40ca9405cdefdafbd5835aebefa7f042f28db4735/pirlygenes-2.10.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.10.0 2026-04-07T14:02:33,062 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/fd/49/2f105db973d6a1c5529814f286d8e1a30d25f4ad3186069ad88a2b12de73/pirlygenes-2.11.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,063 Found link https://files.pythonhosted.org/packages/c9/89/795bf75972aba487519c579848a6a0aa41af85cdb40a4ef6655f6ccff9b0/pirlygenes-2.11.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.11.0 2026-04-07T14:02:33,063 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/3b/3f/6dcb76599cb2820f5cd1066c0d8cd842b7bc6bb8c6917d477ba6b2220947/pirlygenes-2.12.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,064 Found link https://files.pythonhosted.org/packages/29/79/0eb36ca46c02af18da5f7be69c7815f03d21bacac92bde80c37ac742f328/pirlygenes-2.12.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.12.0 2026-04-07T14:02:33,065 Fetching project page and analyzing links: https://www.piwheels.org/simple/pirlygenes/ 2026-04-07T14:02:33,066 Getting page https://www.piwheels.org/simple/pirlygenes/ 2026-04-07T14:02:33,067 Found index url https://www.piwheels.org/simple 2026-04-07T14:02:33,240 Fetched page https://www.piwheels.org/simple/pirlygenes/ as text/html 2026-04-07T14:02:33,248 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.11.0-py3-none-any.whl#sha256=fb3178b049345f9c0317f2836b267df8ff2b0f59ce7ddaf5dd9b25db24deae3d (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,249 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.10.0-py3-none-any.whl#sha256=393a743c2c0abdcbb8f787acfe60892c2335aa4a6be80038396dc5b27473274c (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,249 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.9.0-py3-none-any.whl#sha256=ca97e53c115bc9d06958ccce0494c60d942faba3dd044564ca15284523b8ec19 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,249 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.8.1-py3-none-any.whl#sha256=1b346af13b190e47650615724130b80dc1044b25269d3603013a7436e13f4ab6 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,250 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.8.0-py3-none-any.whl#sha256=9674c64aec5ff095f4fd209c995e33c4427c4029d9786a79177b3d1b837a6faf (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,250 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.7.1-py3-none-any.whl#sha256=711ccbff08ff3332a4caf4b1867ed739f0a4f59cd39dcdf7b2d2d46bb7bb12cb (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,251 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.7.0-py3-none-any.whl#sha256=c9b45dd5c01a5c24f9323fa0fbc8c32b9e70e49d7898e965ecd199ae56a992de (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,252 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.6.1-py3-none-any.whl#sha256=7f45bca601f637ca0bfa8466169c84685b60a3dd5fcb8d07132cd1fa4159f3a8 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,252 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.6.0-py3-none-any.whl#sha256=99581a72b34217d895a9e9377aebff39d3cccb34eea0c01f3056f29d8ea69479 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,253 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.5.1-py3-none-any.whl#sha256=b097b3f8b48f33c23fc888588f0644e92b3b973d37536ae992576cff3d2c550a (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,254 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.5.0-py3-none-any.whl#sha256=7ed846a4e0950617d0103bb8a51b54f0f00bfa982caa83c9013067f52251e39e (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,254 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.4.2-py3-none-any.whl#sha256=25793e34918b22dc36562123fdf4e753df72f9cc712aa69c1f151b96a09ab68a (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,255 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.4.1-py3-none-any.whl#sha256=a8a045cb5d44a0dc2d8d5b5d15f847d44c7fcbf4e65dfb65be5127275d30604c (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,255 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.4.0-py3-none-any.whl#sha256=06c550405b77c1a7f42776114270baca28b88844cd57d5a0f5e0ed554ee215dc (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,256 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.3.2-py3-none-any.whl#sha256=dc55fdcf24cb20e6e920706a735f11dc23aaaf50051f4a01414854d27c76e89f (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,257 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.3.1-py3-none-any.whl#sha256=c90c60420627308e8f538bbaa1306ced6e7699e82818b6016119c5b5661936b0 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,257 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.3.0-py3-none-any.whl#sha256=88bf981b5ba9b7fa0a46232499d049d3faafaf76e258e3d09e1b65ba9f97b22d (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,258 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.2.1-py3-none-any.whl#sha256=5327c129eaf178c76a60b5257dfe32546f0c09dd8881ddb296f458e11934ccf7 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,258 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.2.0-py3-none-any.whl#sha256=09718fb06f1ce838406a07641c7df1df1ff56ad9bcca5e70f0dabeabf18d9eb6 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,258 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.1.0-py3-none-any.whl#sha256=6e0978a40a4b6a16e6e44012574ac0838b0abf01a40770a2b4c8e7db2aa583a6 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,259 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.0.1-py3-none-any.whl#sha256=0956b5fd3f21d43dea90b38bbc06628b327c49504aa0fc53d3d81d55208c6f5f (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,260 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.0.0-py3-none-any.whl#sha256=de738501d014cdb6760b96e01afa7d18cb8dac3d863d433e9ce8fce0172641f5 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,260 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-1.9.0-py3-none-any.whl#sha256=3be90370a11cc9b33de80e02b84f99700133addc5994e35bcb8b80b76f09f8ae (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,261 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-1.8.1-py3-none-any.whl#sha256=35f8427ceac3714bb6339609b7f3602ea81ea8b5642c4e760931e9a28263a28b (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,261 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-1.8.0-py3-none-any.whl#sha256=202a232caf63d7ad6c6d202e8d8c6c3f52bb57aa7bd124b14be89597a4637f02 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,262 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-1.7.0-py3-none-any.whl#sha256=01a45cdf8948ae1d8a8034363ecd9357088d1df4c99ffb9370f8d68432ff4fa7 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T14:02:33,263 Skipping link: not a file: https://www.piwheels.org/simple/pirlygenes/ 2026-04-07T14:02:33,263 Skipping link: not a file: https://pypi.org/simple/pirlygenes/ 2026-04-07T14:02:33,287 Given no hashes to check 1 links for project 'pirlygenes': discarding no candidates 2026-04-07T14:02:33,307 Collecting pirlygenes==2.12.0 2026-04-07T14:02:33,309 Created temporary directory: /tmp/pip-unpack-4hl_ee9k 2026-04-07T14:02:33,545 Downloading pirlygenes-2.12.0.tar.gz (1.1 MB) 2026-04-07T14:02:34,004 Added pirlygenes==2.12.0 from https://files.pythonhosted.org/packages/29/79/0eb36ca46c02af18da5f7be69c7815f03d21bacac92bde80c37ac742f328/pirlygenes-2.12.0.tar.gz to build tracker '/tmp/pip-build-tracker-ep34adlp' 2026-04-07T14:02:34,010 Created temporary directory: /tmp/pip-build-env-3y_2qaqr 2026-04-07T14:02:34,014 Installing build dependencies: started 2026-04-07T14:02:34,015 Running command pip subprocess to install build dependencies 2026-04-07T14:02:34,046 Error processing line 1 of /home/piwheels/.local/lib/python3.11/site-packages/outofcuda_hook.pth: 2026-04-07T14:02:34,085 Traceback (most recent call last): 2026-04-07T14:02:34,086 File "", line 192, in addpackage 2026-04-07T14:02:34,087 File "", line 1, in 2026-04-07T14:02:34,087 ModuleNotFoundError: No module named 'outofcuda' 2026-04-07T14:02:34,088 Remainder of file ignored 2026-04-07T14:02:35,148 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-04-07T14:02:35,557 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-07T14:02:35,593 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-07T14:02:37,381 Collecting setuptools>=60 2026-04-07T14:02:37,464 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-04-07T14:02:37,841 Collecting setuptools-scm>=8.0 2026-04-07T14:02:37,857 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl (21 kB) 2026-04-07T14:02:37,939 Collecting vcs-versioning>=1.0.0.dev0 2026-04-07T14:02:37,957 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl (79 kB) 2026-04-07T14:02:38,138 Collecting packaging>=20 2026-04-07T14:02:38,154 Using cached https://www.piwheels.org/simple/packaging/packaging-26.0-py3-none-any.whl (74 kB) 2026-04-07T14:02:41,631 Installing collected packages: setuptools, packaging, vcs-versioning, setuptools-scm 2026-04-07T14:02:45,244 Creating /tmp/pip-build-env-3y_2qaqr/overlay/local/bin 2026-04-07T14:02:45,246 changing mode of /tmp/pip-build-env-3y_2qaqr/overlay/local/bin/vcs-versioning to 755 2026-04-07T14:02:45,352 changing mode of /tmp/pip-build-env-3y_2qaqr/overlay/local/bin/setuptools-scm to 755 2026-04-07T14:02:45,380 Successfully installed packaging-26.0 setuptools-82.0.1 setuptools-scm-10.0.5 vcs-versioning-1.1.1 2026-04-07T14:02:45,667 Installing build dependencies: finished with status 'done' 2026-04-07T14:02:45,682 Getting requirements to build wheel: started 2026-04-07T14:02:45,684 Running command Getting requirements to build wheel 2026-04-07T14:02:46,334 toml section missing PosixPath('pyproject.toml') does not contain any of the tool sections: ['setuptools_scm', 'vcs-versioning'] 2026-04-07T14:02:46,447 /tmp/pip-build-env-3y_2qaqr/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-07T14:02:46,448 !! 2026-04-07T14:02:46,449 ******************************************************************************** 2026-04-07T14:02:46,450 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-07T14:02:46,451 License :: OSI Approved :: Apache Software License 2026-04-07T14:02:46,452 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-07T14:02:46,453 ******************************************************************************** 2026-04-07T14:02:46,453 !! 2026-04-07T14:02:46,454 dist._finalize_license_expression() 2026-04-07T14:02:46,454 /tmp/pip-build-env-3y_2qaqr/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-07T14:02:46,455 !! 2026-04-07T14:02:46,456 ******************************************************************************** 2026-04-07T14:02:46,456 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-07T14:02:46,457 License :: OSI Approved :: Apache Software License 2026-04-07T14:02:46,458 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-07T14:02:46,459 ******************************************************************************** 2026-04-07T14:02:46,459 !! 2026-04-07T14:02:46,460 self._finalize_license_expression() 2026-04-07T14:02:46,461 running egg_info 2026-04-07T14:02:46,469 writing pirlygenes.egg-info/PKG-INFO 2026-04-07T14:02:46,473 writing dependency_links to pirlygenes.egg-info/dependency_links.txt 2026-04-07T14:02:46,475 writing entry points to pirlygenes.egg-info/entry_points.txt 2026-04-07T14:02:46,476 writing requirements to pirlygenes.egg-info/requires.txt 2026-04-07T14:02:46,477 writing top-level names to pirlygenes.egg-info/top_level.txt 2026-04-07T14:02:46,519 /tmp/pip-build-env-3y_2qaqr/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-04-07T14:02:46,519 return get_active_overrides().subprocess_timeout 2026-04-07T14:02:46,526 listing git files failed - pretending there aren't any 2026-04-07T14:02:46,535 reading manifest file 'pirlygenes.egg-info/SOURCES.txt' 2026-04-07T14:02:46,543 adding license file 'LICENSE' 2026-04-07T14:02:46,548 writing manifest file 'pirlygenes.egg-info/SOURCES.txt' 2026-04-07T14:02:46,653 Getting requirements to build wheel: finished with status 'done' 2026-04-07T14:02:46,656 Created temporary directory: /tmp/pip-modern-metadata-t27igl5f 2026-04-07T14:02:46,658 Preparing metadata (pyproject.toml): started 2026-04-07T14:02:46,660 Running command Preparing metadata (pyproject.toml) 2026-04-07T14:02:47,262 toml section missing PosixPath('pyproject.toml') does not contain any of the tool sections: ['setuptools_scm', 'vcs-versioning'] 2026-04-07T14:02:47,367 /tmp/pip-build-env-3y_2qaqr/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-07T14:02:47,368 !! 2026-04-07T14:02:47,369 ******************************************************************************** 2026-04-07T14:02:47,369 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-07T14:02:47,371 License :: OSI Approved :: Apache Software License 2026-04-07T14:02:47,372 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-07T14:02:47,372 ******************************************************************************** 2026-04-07T14:02:47,374 !! 2026-04-07T14:02:47,374 dist._finalize_license_expression() 2026-04-07T14:02:47,375 /tmp/pip-build-env-3y_2qaqr/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-07T14:02:47,375 !! 2026-04-07T14:02:47,377 ******************************************************************************** 2026-04-07T14:02:47,377 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-07T14:02:47,378 License :: OSI Approved :: Apache Software License 2026-04-07T14:02:47,379 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-07T14:02:47,380 ******************************************************************************** 2026-04-07T14:02:47,380 !! 2026-04-07T14:02:47,381 self._finalize_license_expression() 2026-04-07T14:02:47,382 running dist_info 2026-04-07T14:02:47,397 creating /tmp/pip-modern-metadata-t27igl5f/pirlygenes.egg-info 2026-04-07T14:02:47,398 writing /tmp/pip-modern-metadata-t27igl5f/pirlygenes.egg-info/PKG-INFO 2026-04-07T14:02:47,401 writing dependency_links to /tmp/pip-modern-metadata-t27igl5f/pirlygenes.egg-info/dependency_links.txt 2026-04-07T14:02:47,403 writing entry points to /tmp/pip-modern-metadata-t27igl5f/pirlygenes.egg-info/entry_points.txt 2026-04-07T14:02:47,404 writing requirements to /tmp/pip-modern-metadata-t27igl5f/pirlygenes.egg-info/requires.txt 2026-04-07T14:02:47,405 writing top-level names to /tmp/pip-modern-metadata-t27igl5f/pirlygenes.egg-info/top_level.txt 2026-04-07T14:02:47,407 writing manifest file '/tmp/pip-modern-metadata-t27igl5f/pirlygenes.egg-info/SOURCES.txt' 2026-04-07T14:02:47,443 /tmp/pip-build-env-3y_2qaqr/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-04-07T14:02:47,444 return get_active_overrides().subprocess_timeout 2026-04-07T14:02:47,450 listing git files failed - pretending there aren't any 2026-04-07T14:02:47,458 reading manifest file '/tmp/pip-modern-metadata-t27igl5f/pirlygenes.egg-info/SOURCES.txt' 2026-04-07T14:02:47,460 adding license file 'LICENSE' 2026-04-07T14:02:47,464 writing manifest file '/tmp/pip-modern-metadata-t27igl5f/pirlygenes.egg-info/SOURCES.txt' 2026-04-07T14:02:47,465 creating '/tmp/pip-modern-metadata-t27igl5f/pirlygenes-2.12.0.dist-info' 2026-04-07T14:02:47,599 Preparing metadata (pyproject.toml): finished with status 'done' 2026-04-07T14:02:47,605 Source in /tmp/pip-wheel-iizuwuqd/pirlygenes_f33c9f31b17c4fb8af2f2beb04765b80 has version 2.12.0, which satisfies requirement pirlygenes==2.12.0 from https://files.pythonhosted.org/packages/29/79/0eb36ca46c02af18da5f7be69c7815f03d21bacac92bde80c37ac742f328/pirlygenes-2.12.0.tar.gz 2026-04-07T14:02:47,606 Removed pirlygenes==2.12.0 from https://files.pythonhosted.org/packages/29/79/0eb36ca46c02af18da5f7be69c7815f03d21bacac92bde80c37ac742f328/pirlygenes-2.12.0.tar.gz from build tracker '/tmp/pip-build-tracker-ep34adlp' 2026-04-07T14:02:47,612 Created temporary directory: /tmp/pip-unpack-msi4hxpa 2026-04-07T14:02:47,613 Building wheels for collected packages: pirlygenes 2026-04-07T14:02:47,617 Created temporary directory: /tmp/pip-wheel-95wqlx9k 2026-04-07T14:02:47,618 Destination directory: /tmp/pip-wheel-95wqlx9k 2026-04-07T14:02:47,620 Building wheel for pirlygenes (pyproject.toml): started 2026-04-07T14:02:47,622 Running command Building wheel for pirlygenes (pyproject.toml) 2026-04-07T14:02:48,214 toml section missing PosixPath('pyproject.toml') does not contain any of the tool sections: ['setuptools_scm', 'vcs-versioning'] 2026-04-07T14:02:48,319 /tmp/pip-build-env-3y_2qaqr/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-07T14:02:48,320 !! 2026-04-07T14:02:48,321 ******************************************************************************** 2026-04-07T14:02:48,322 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-07T14:02:48,323 License :: OSI Approved :: Apache Software License 2026-04-07T14:02:48,324 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-07T14:02:48,324 ******************************************************************************** 2026-04-07T14:02:48,325 !! 2026-04-07T14:02:48,325 dist._finalize_license_expression() 2026-04-07T14:02:48,326 /tmp/pip-build-env-3y_2qaqr/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-07T14:02:48,326 !! 2026-04-07T14:02:48,327 ******************************************************************************** 2026-04-07T14:02:48,328 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-07T14:02:48,329 License :: OSI Approved :: Apache Software License 2026-04-07T14:02:48,330 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-07T14:02:48,330 ******************************************************************************** 2026-04-07T14:02:48,331 !! 2026-04-07T14:02:48,332 self._finalize_license_expression() 2026-04-07T14:02:48,332 running bdist_wheel 2026-04-07T14:02:48,354 running build 2026-04-07T14:02:48,355 running build_py 2026-04-07T14:02:48,357 creating build/lib/pirlygenes 2026-04-07T14:02:48,359 copying pirlygenes/__init__.py -> build/lib/pirlygenes 2026-04-07T14:02:48,361 copying pirlygenes/load_dataset.py -> build/lib/pirlygenes 2026-04-07T14:02:48,363 copying pirlygenes/version.py -> build/lib/pirlygenes 2026-04-07T14:02:48,364 copying pirlygenes/gene_names.py -> build/lib/pirlygenes 2026-04-07T14:02:48,366 copying pirlygenes/load_expression.py -> build/lib/pirlygenes 2026-04-07T14:02:48,369 copying pirlygenes/transcript_to_gene.py -> build/lib/pirlygenes 2026-04-07T14:02:48,371 copying pirlygenes/plot_data_helpers.py -> build/lib/pirlygenes 2026-04-07T14:02:48,374 copying pirlygenes/gene_sets_cancer.py -> build/lib/pirlygenes 2026-04-07T14:02:48,377 copying pirlygenes/cli.py -> build/lib/pirlygenes 2026-04-07T14:02:48,378 copying pirlygenes/gene_sets_old.py -> build/lib/pirlygenes 2026-04-07T14:02:48,380 copying pirlygenes/aggregate_gene_expression.py -> build/lib/pirlygenes 2026-04-07T14:02:48,383 copying pirlygenes/plot.py -> build/lib/pirlygenes 2026-04-07T14:02:48,385 copying pirlygenes/gene_ids.py -> build/lib/pirlygenes 2026-04-07T14:02:48,387 copying pirlygenes/common.py -> build/lib/pirlygenes 2026-04-07T14:02:48,389 running egg_info 2026-04-07T14:02:48,404 writing pirlygenes.egg-info/PKG-INFO 2026-04-07T14:02:48,407 writing dependency_links to pirlygenes.egg-info/dependency_links.txt 2026-04-07T14:02:48,408 writing entry points to pirlygenes.egg-info/entry_points.txt 2026-04-07T14:02:48,410 writing requirements to pirlygenes.egg-info/requires.txt 2026-04-07T14:02:48,411 writing top-level names to pirlygenes.egg-info/top_level.txt 2026-04-07T14:02:48,440 /tmp/pip-build-env-3y_2qaqr/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-04-07T14:02:48,441 return get_active_overrides().subprocess_timeout 2026-04-07T14:02:48,447 listing git files failed - pretending there aren't any 2026-04-07T14:02:48,454 reading manifest file 'pirlygenes.egg-info/SOURCES.txt' 2026-04-07T14:02:48,460 adding license file 'LICENSE' 2026-04-07T14:02:48,465 writing manifest file 'pirlygenes.egg-info/SOURCES.txt' 2026-04-07T14:02:48,467 /tmp/pip-build-env-3y_2qaqr/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'pirlygenes.data' is absent from the `packages` configuration. 2026-04-07T14:02:48,468 !! 2026-04-07T14:02:48,469 ******************************************************************************** 2026-04-07T14:02:48,470 ############################ 2026-04-07T14:02:48,470 # Package would be ignored # 2026-04-07T14:02:48,471 ############################ 2026-04-07T14:02:48,471 Python recognizes 'pirlygenes.data' as an importable package[^1], 2026-04-07T14:02:48,471 but it is absent from setuptools' `packages` configuration. 2026-04-07T14:02:48,472 This leads to an ambiguous overall configuration. If you want to distribute this 2026-04-07T14:02:48,472 package, please make sure that 'pirlygenes.data' is explicitly added 2026-04-07T14:02:48,473 to the `packages` configuration field. 2026-04-07T14:02:48,474 Alternatively, you can also rely on setuptools' discovery methods 2026-04-07T14:02:48,474 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-04-07T14:02:48,475 instead of `find_packages(...)`/`find:`). 2026-04-07T14:02:48,475 You can read more about "package discovery" on setuptools documentation page: 2026-04-07T14:02:48,476 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-04-07T14:02:48,477 If you don't want 'pirlygenes.data' to be distributed and are 2026-04-07T14:02:48,478 already explicitly excluding 'pirlygenes.data' via 2026-04-07T14:02:48,478 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-04-07T14:02:48,479 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-04-07T14:02:48,479 combination with a more fine grained `package-data` configuration. 2026-04-07T14:02:48,481 You can read more about "package data files" on setuptools documentation page: 2026-04-07T14:02:48,482 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-04-07T14:02:48,484 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-04-07T14:02:48,484 even if it does not contain any `.py` files. 2026-04-07T14:02:48,485 On the other hand, currently there is no concept of package data 2026-04-07T14:02:48,485 directory, all directories are treated like packages. 2026-04-07T14:02:48,485 ******************************************************************************** 2026-04-07T14:02:48,486 !! 2026-04-07T14:02:48,487 check.warn(importable) 2026-04-07T14:02:48,487 copying pirlygenes/PLAN-1.4.0-radioligand.md -> build/lib/pirlygenes 2026-04-07T14:02:48,488 creating build/lib/pirlygenes/data 2026-04-07T14:02:48,488 copying pirlygenes/data/ADC-approved.csv -> build/lib/pirlygenes/data 2026-04-07T14:02:48,489 copying pirlygenes/data/ADC-trials.csv -> build/lib/pirlygenes/data 2026-04-07T14:02:48,489 copying pirlygenes/data/ADC-withdrawn.csv -> build/lib/pirlygenes/data 2026-04-07T14:02:48,490 copying pirlygenes/data/CAR-T-approved.csv -> build/lib/pirlygenes/data 2026-04-07T14:02:48,490 copying pirlygenes/data/TCR-T-approved.csv -> build/lib/pirlygenes/data 2026-04-07T14:02:48,491 copying pirlygenes/data/TCR-T-trials.csv -> build/lib/pirlygenes/data 2026-04-07T14:02:48,494 copying pirlygenes/data/bispecific-antibodies-approved.csv -> build/lib/pirlygenes/data 2026-04-07T14:02:48,496 copying pirlygenes/data/cancer-driver-genes.csv -> build/lib/pirlygenes/data 2026-04-07T14:02:48,500 copying pirlygenes/data/cancer-driver-variants.csv -> build/lib/pirlygenes/data 2026-04-07T14:02:48,503 copying pirlygenes/data/cancer-surfaceome.csv -> build/lib/pirlygenes/data 2026-04-07T14:02:48,505 copying pirlygenes/data/cancer-testis-antigens.csv -> build/lib/pirlygenes/data 2026-04-07T14:02:48,509 copying pirlygenes/data/class1-mhc-presentation-pathway.csv -> build/lib/pirlygenes/data 2026-04-07T14:02:48,512 copying pirlygenes/data/housekeeping-genes.csv -> build/lib/pirlygenes/data 2026-04-07T14:02:48,514 copying pirlygenes/data/immune-gene-sets.csv -> build/lib/pirlygenes/data 2026-04-07T14:02:48,516 copying pirlygenes/data/interferon-response.csv -> build/lib/pirlygenes/data 2026-04-07T14:02:48,518 copying pirlygenes/data/multispecific-tcell-engager-trials.csv -> build/lib/pirlygenes/data 2026-04-07T14:02:48,521 copying pirlygenes/data/pan-cancer-expression.csv -> build/lib/pirlygenes/data 2026-04-07T14:02:48,548 copying pirlygenes/data/radioligand-targets.csv -> build/lib/pirlygenes/data 2026-04-07T14:02:48,550 copying pirlygenes/data/surface-proteins.csv -> build/lib/pirlygenes/data 2026-04-07T14:02:48,571 installing to build/bdist.linux-armv7l/wheel 2026-04-07T14:02:48,572 running install 2026-04-07T14:02:48,595 running install_lib 2026-04-07T14:02:48,603 creating build/bdist.linux-armv7l/wheel 2026-04-07T14:02:48,605 creating build/bdist.linux-armv7l/wheel/pirlygenes 2026-04-07T14:02:48,606 copying build/lib/pirlygenes/__init__.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-07T14:02:48,609 copying build/lib/pirlygenes/load_dataset.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-07T14:02:48,611 copying build/lib/pirlygenes/version.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-07T14:02:48,613 copying build/lib/pirlygenes/gene_names.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-07T14:02:48,615 copying build/lib/pirlygenes/PLAN-1.4.0-radioligand.md -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-07T14:02:48,618 creating build/bdist.linux-armv7l/wheel/pirlygenes/data 2026-04-07T14:02:48,619 copying build/lib/pirlygenes/data/cancer-testis-antigens.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T14:02:48,623 copying build/lib/pirlygenes/data/ADC-trials.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T14:02:48,626 copying build/lib/pirlygenes/data/bispecific-antibodies-approved.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T14:02:48,628 copying build/lib/pirlygenes/data/radioligand-targets.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T14:02:48,630 copying build/lib/pirlygenes/data/surface-proteins.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T14:02:48,637 copying build/lib/pirlygenes/data/CAR-T-approved.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T14:02:48,638 copying build/lib/pirlygenes/data/class1-mhc-presentation-pathway.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T14:02:48,640 copying build/lib/pirlygenes/data/TCR-T-approved.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T14:02:48,642 copying build/lib/pirlygenes/data/ADC-approved.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T14:02:48,644 copying build/lib/pirlygenes/data/cancer-driver-genes.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T14:02:48,647 copying build/lib/pirlygenes/data/interferon-response.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T14:02:48,649 copying build/lib/pirlygenes/data/ADC-withdrawn.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T14:02:48,650 copying build/lib/pirlygenes/data/multispecific-tcell-engager-trials.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T14:02:48,652 copying build/lib/pirlygenes/data/immune-gene-sets.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T14:02:48,654 copying build/lib/pirlygenes/data/TCR-T-trials.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T14:02:48,657 copying build/lib/pirlygenes/data/cancer-driver-variants.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T14:02:48,660 copying build/lib/pirlygenes/data/housekeeping-genes.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T14:02:48,662 copying build/lib/pirlygenes/data/pan-cancer-expression.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T14:02:48,682 copying build/lib/pirlygenes/data/cancer-surfaceome.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T14:02:48,684 copying build/lib/pirlygenes/load_expression.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-07T14:02:48,687 copying build/lib/pirlygenes/transcript_to_gene.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-07T14:02:48,690 copying build/lib/pirlygenes/plot_data_helpers.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-07T14:02:48,692 copying build/lib/pirlygenes/gene_sets_cancer.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-07T14:02:48,695 copying build/lib/pirlygenes/cli.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-07T14:02:48,697 copying build/lib/pirlygenes/gene_sets_old.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-07T14:02:48,699 copying build/lib/pirlygenes/aggregate_gene_expression.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-07T14:02:48,701 copying build/lib/pirlygenes/plot.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-07T14:02:48,704 copying build/lib/pirlygenes/gene_ids.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-07T14:02:48,706 copying build/lib/pirlygenes/common.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-07T14:02:48,708 running install_egg_info 2026-04-07T14:02:48,715 Copying pirlygenes.egg-info to build/bdist.linux-armv7l/wheel/./pirlygenes-2.12.0-py3.11.egg-info 2026-04-07T14:02:48,727 running install_scripts 2026-04-07T14:02:48,739 creating build/bdist.linux-armv7l/wheel/pirlygenes-2.12.0.dist-info/WHEEL 2026-04-07T14:02:48,742 creating '/tmp/pip-wheel-95wqlx9k/.tmp-8109ngzk/pirlygenes-2.12.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-04-07T14:02:48,745 adding 'pirlygenes/PLAN-1.4.0-radioligand.md' 2026-04-07T14:02:48,746 adding 'pirlygenes/__init__.py' 2026-04-07T14:02:48,748 adding 'pirlygenes/aggregate_gene_expression.py' 2026-04-07T14:02:48,749 adding 'pirlygenes/cli.py' 2026-04-07T14:02:48,750 adding 'pirlygenes/common.py' 2026-04-07T14:02:48,752 adding 'pirlygenes/gene_ids.py' 2026-04-07T14:02:48,753 adding 'pirlygenes/gene_names.py' 2026-04-07T14:02:48,757 adding 'pirlygenes/gene_sets_cancer.py' 2026-04-07T14:02:48,758 adding 'pirlygenes/gene_sets_old.py' 2026-04-07T14:02:48,760 adding 'pirlygenes/load_dataset.py' 2026-04-07T14:02:48,761 adding 'pirlygenes/load_expression.py' 2026-04-07T14:02:48,764 adding 'pirlygenes/plot.py' 2026-04-07T14:02:48,767 adding 'pirlygenes/plot_data_helpers.py' 2026-04-07T14:02:48,768 adding 'pirlygenes/transcript_to_gene.py' 2026-04-07T14:02:48,769 adding 'pirlygenes/version.py' 2026-04-07T14:02:48,771 adding 'pirlygenes/data/ADC-approved.csv' 2026-04-07T14:02:48,776 adding 'pirlygenes/data/ADC-trials.csv' 2026-04-07T14:02:48,777 adding 'pirlygenes/data/ADC-withdrawn.csv' 2026-04-07T14:02:48,778 adding 'pirlygenes/data/CAR-T-approved.csv' 2026-04-07T14:02:48,780 adding 'pirlygenes/data/TCR-T-approved.csv' 2026-04-07T14:02:48,783 adding 'pirlygenes/data/TCR-T-trials.csv' 2026-04-07T14:02:48,784 adding 'pirlygenes/data/bispecific-antibodies-approved.csv' 2026-04-07T14:02:48,789 adding 'pirlygenes/data/cancer-driver-genes.csv' 2026-04-07T14:02:48,792 adding 'pirlygenes/data/cancer-driver-variants.csv' 2026-04-07T14:02:48,794 adding 'pirlygenes/data/cancer-surfaceome.csv' 2026-04-07T14:02:48,800 adding 'pirlygenes/data/cancer-testis-antigens.csv' 2026-04-07T14:02:48,801 adding 'pirlygenes/data/class1-mhc-presentation-pathway.csv' 2026-04-07T14:02:48,803 adding 'pirlygenes/data/housekeeping-genes.csv' 2026-04-07T14:02:48,804 adding 'pirlygenes/data/immune-gene-sets.csv' 2026-04-07T14:02:48,806 adding 'pirlygenes/data/interferon-response.csv' 2026-04-07T14:02:48,807 adding 'pirlygenes/data/multispecific-tcell-engager-trials.csv' 2026-04-07T14:02:49,157 adding 'pirlygenes/data/pan-cancer-expression.csv' 2026-04-07T14:02:49,167 adding 'pirlygenes/data/radioligand-targets.csv' 2026-04-07T14:02:49,189 adding 'pirlygenes/data/surface-proteins.csv' 2026-04-07T14:02:49,195 adding 'pirlygenes-2.12.0.dist-info/licenses/LICENSE' 2026-04-07T14:02:49,197 adding 'pirlygenes-2.12.0.dist-info/METADATA' 2026-04-07T14:02:49,198 adding 'pirlygenes-2.12.0.dist-info/WHEEL' 2026-04-07T14:02:49,199 adding 'pirlygenes-2.12.0.dist-info/entry_points.txt' 2026-04-07T14:02:49,200 adding 'pirlygenes-2.12.0.dist-info/top_level.txt' 2026-04-07T14:02:49,201 adding 'pirlygenes-2.12.0.dist-info/RECORD' 2026-04-07T14:02:49,209 removing build/bdist.linux-armv7l/wheel 2026-04-07T14:02:49,325 Building wheel for pirlygenes (pyproject.toml): finished with status 'done' 2026-04-07T14:02:49,340 Created wheel for pirlygenes: filename=pirlygenes-2.12.0-py3-none-any.whl size=553332 sha256=4186f04e1d7c70e23fa5546b20cdac46e49b68e86fc5bda42db5151921548f5d 2026-04-07T14:02:49,341 Stored in directory: /tmp/pip-ephem-wheel-cache-1isqtw94/wheels/11/53/5b/9fb7e1a9d4f8be93477bf830c610758ed44116e8a934153841 2026-04-07T14:02:49,354 Successfully built pirlygenes 2026-04-07T14:02:49,378 Removed build tracker: '/tmp/pip-build-tracker-ep34adlp'