2026-04-07T17:07:55,368 Created temporary directory: /tmp/pip-ephem-wheel-cache-qpdz3nw1 2026-04-07T17:07:55,370 Created temporary directory: /tmp/pip-build-tracker-t626wzu0 2026-04-07T17:07:55,371 Initialized build tracking at /tmp/pip-build-tracker-t626wzu0 2026-04-07T17:07:55,371 Created build tracker: /tmp/pip-build-tracker-t626wzu0 2026-04-07T17:07:55,372 Entered build tracker: /tmp/pip-build-tracker-t626wzu0 2026-04-07T17:07:55,372 Created temporary directory: /tmp/pip-wheel-6pydtljj 2026-04-07T17:07:55,376 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-07T17:07:55,378 Created temporary directory: /tmp/pip-ephem-wheel-cache-e1gmbqej 2026-04-07T17:07:55,402 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-07T17:07:55,405 2 location(s) to search for versions of pirlygenes: 2026-04-07T17:07:55,405 * https://pypi.org/simple/pirlygenes/ 2026-04-07T17:07:55,405 * https://www.piwheels.org/simple/pirlygenes/ 2026-04-07T17:07:55,406 Fetching project page and analyzing links: https://pypi.org/simple/pirlygenes/ 2026-04-07T17:07:55,407 Getting page https://pypi.org/simple/pirlygenes/ 2026-04-07T17:07:55,408 Found index url https://pypi.org/simple 2026-04-07T17:07:55,637 Fetched page https://pypi.org/simple/pirlygenes/ as application/vnd.pypi.simple.v1+json 2026-04-07T17:07:55,650 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/2e/66/a994711ece0c32dc4037b2c20acb069375f8eb2c80bdcca3a9efa47fdaee/pirlygenes-1.7.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,651 Found link https://files.pythonhosted.org/packages/17/fe/bcdacc3535105e4aed789ffd67937b0a725f5eaf16e19e2d70d7d9994985/pirlygenes-1.7.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 1.7.0 2026-04-07T17:07:55,652 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/59/b0/3e2df98a4c7e570e430d5a43b78c4325669dc94f670df919535730ad97e4/pirlygenes-1.8.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,653 Found link https://files.pythonhosted.org/packages/4b/7c/57808dd823cb43e0775fef54e28607a61d6e34549ef6c21f02e85567e13a/pirlygenes-1.8.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 1.8.0 2026-04-07T17:07:55,654 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/9a/8d/f18f1d145c3cc415d28137493c5cb8e758516d9ac9633fc74cb4f86a318a/pirlygenes-1.8.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,655 Found link https://files.pythonhosted.org/packages/61/0c/c3f0aff27c3758ba3f3ee1f4a63a05238e02043251af230032d9ba555624/pirlygenes-1.8.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 1.8.1 2026-04-07T17:07:55,656 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/24/35/2c1111a823202625bf5719038d745faaa60ed3613bc790db7a365d0d9e91/pirlygenes-1.9.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,657 Found link https://files.pythonhosted.org/packages/00/21/33762d0e1497cb8f52920f8804591991b077145275a9bb472d54cb34bd3b/pirlygenes-1.9.0.tar.gz (from 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https://files.pythonhosted.org/packages/f0/57/519f98c3e3ce7414973c34a35b56e0123e63c2397c1c28a40f52096110e8/pirlygenes-2.0.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.0.1 2026-04-07T17:07:55,661 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/b2/a5/eb85bc710dc92ed90930681df0d0727ba7c8adce5f597218b60c8e749abb/pirlygenes-2.1.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,662 Found link https://files.pythonhosted.org/packages/ac/1c/535ab059a16f501c104975a9afdbe26292625c5f6b4565dfaff29827dae5/pirlygenes-2.1.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.1.0 2026-04-07T17:07:55,663 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/31/67/9fb299b51b80ea11807d6cca24343e9b5bcd4f343f5590f443f4ab27d256/pirlygenes-2.2.0-py3-none-any.whl (from 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2026-04-07T17:07:55,669 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/8a/44/da6370091aea72fec9b67e936a15ae4ebdf9dff908aa9d19047e94159d04/pirlygenes-2.3.2-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,670 Found link https://files.pythonhosted.org/packages/10/a9/907cc4508814906e8c990c01f4f5a8e876d8494a06e48b3231bc8cb0fc76/pirlygenes-2.3.2.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.3.2 2026-04-07T17:07:55,671 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/3f/b6/830da154d45d5ac46ae4fec7615e8cad6fdc54a8977e3ad5d5b719b3e381/pirlygenes-2.4.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,672 Found link https://files.pythonhosted.org/packages/72/cb/85849617feaf50f329a0545583033d697e353ad48f34484f70c94a38a7fe/pirlygenes-2.4.0.tar.gz (from 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https://files.pythonhosted.org/packages/6a/f7/cd7bb912ebd9a8fd5678378444dd4cbf57614f841b83aca8d8ae68221512/pirlygenes-2.4.2.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.4.2 2026-04-07T17:07:55,676 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/06/ba/c6259e141db6ae01ab36e9b24878291184fa9551fbba7d8cc122d162370a/pirlygenes-2.5.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,677 Found link https://files.pythonhosted.org/packages/2a/02/a683073293d6e1567e993c5ddeb5b4f20cecf9c143b7c34ca69c6b0fe0bf/pirlygenes-2.5.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.5.0 2026-04-07T17:07:55,677 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/3b/3a/d237a82d8794a11a26a1ef9bfff88a11e9bdf47b1f6505e328954ced2b0e/pirlygenes-2.5.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,678 Found link https://files.pythonhosted.org/packages/b5/e2/879e92ab87381e4ef635263624155d4f2331588bc05aea8a223225f108f7/pirlygenes-2.5.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.5.1 2026-04-07T17:07:55,679 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/a4/c0/3c64fac1cdedad5802d2905b10f836c5a5d805a9dc0d0beeda285a065df3/pirlygenes-2.6.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,680 Found link https://files.pythonhosted.org/packages/2a/df/7ffd654f123a21c608210fe4ed416bda8e56ceb36743d27a8fa4b9eace1e/pirlygenes-2.6.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.6.0 2026-04-07T17:07:55,681 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/f0/d2/7ffa0b7cc699219de0878a38a56a56cdae06b1ca3c9ff50044206427a807/pirlygenes-2.6.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,682 Found link https://files.pythonhosted.org/packages/f6/b2/938ef2e7e5d2a6bee6875aeeb1ed25157d2cdbec1b11345a753cd45565e5/pirlygenes-2.6.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.6.1 2026-04-07T17:07:55,683 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/7b/fb/bc52d124faa5327f959bd76cc38660bc2a83aecb0407925ea1049ef3959b/pirlygenes-2.7.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,684 Found link https://files.pythonhosted.org/packages/15/67/d13b9f14153a2b9aea2b84de47f2e83691875d365f34778b508481422836/pirlygenes-2.7.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.7.0 2026-04-07T17:07:55,684 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/57/7c/f087e5968735238e4782164c5af185405be0eec060121b61c187f5c55429/pirlygenes-2.7.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,686 Found link https://files.pythonhosted.org/packages/0a/9f/6f1a18016493c71ae63b236e4e5186535b85f15188b969cfded686dec47a/pirlygenes-2.7.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.7.1 2026-04-07T17:07:55,686 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/34/d6/ffd2ae0d7511cb22ee2b857520a19acb21ff834f8d8baaa2e70c4c542d7f/pirlygenes-2.8.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,687 Found link https://files.pythonhosted.org/packages/33/84/8cd197f6dc1169477bc562d9d667a30ccb0488747c3fe5682e91dea7e16c/pirlygenes-2.8.0.tar.gz (from 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https://files.pythonhosted.org/packages/24/1b/b031480204c158068a8a9a41f9943f64a8d79db6208bb248992194647b41/pirlygenes-2.13.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,697 Found link https://files.pythonhosted.org/packages/6a/ab/24d8ae363a602cdc9546b361c682f9617021dcc21108da752a133e924d61/pirlygenes-2.13.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.13.0 2026-04-07T17:07:55,698 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/11/09/638a409f1f5e952118c66b24f370b4e8a3e897d91071099ff155be9becc8/pirlygenes-2.14.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,698 Found link https://files.pythonhosted.org/packages/73/b5/f9e8f070a97da840f6e6e486d49bde55bc00bc6ecae9bf11f0d08025a6dd/pirlygenes-2.14.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.14.0 2026-04-07T17:07:55,699 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/95/2a/b43f3803bea70ac0974ab8c4df778feb31086978651b9f3c72f8eb65f42b/pirlygenes-3.0.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,700 Found link https://files.pythonhosted.org/packages/52/c6/b99e09d09e6fd528005a69015eb30c5993ba204329d4e94b6031f9fadaf2/pirlygenes-3.0.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 3.0.0 2026-04-07T17:07:55,700 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/f7/f1/e53a5ed1c227fe5678364a6d1b50e3d7af94dbea0d6fa05d32542ce189e2/pirlygenes-3.1.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,701 Found link https://files.pythonhosted.org/packages/00/8a/755bfa90172797e2862fb529ce9dce49f5d7eb6b2745f22e66636982937b/pirlygenes-3.1.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 3.1.0 2026-04-07T17:07:55,702 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/f0/0c/6945c5b118805b0587973d00ba41fa8493aad6d24fb0b841ed7ea668a5c9/pirlygenes-3.2.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,703 Found link https://files.pythonhosted.org/packages/6e/68/168bf32c25519bb3078eec32b5a00be716a0480a4ba7bd85b1a839761f01/pirlygenes-3.2.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 3.2.0 2026-04-07T17:07:55,703 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/1b/a4/ac5cf0526b8b3444c9dff82518cf66de95cd7411ee80796ea7343cfd4cbe/pirlygenes-3.3.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,704 Found link https://files.pythonhosted.org/packages/03/67/397c32dc784ffe221594942327557e0505efa8edd5ac85e59d057bda1121/pirlygenes-3.3.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 3.3.0 2026-04-07T17:07:55,705 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/26/3e/62f1c9e48cf8b46832d4e22350d43ca9b9b1727c09f62d4816bbd0c1a829/pirlygenes-3.4.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,705 Found link https://files.pythonhosted.org/packages/ae/c8/3b250046299c1580879c599abf75f7d60c2738bb96370b9cde6e227d5c10/pirlygenes-3.4.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 3.4.0 2026-04-07T17:07:55,706 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/82/e2/0d21f32eba6f7bcc9f9a95150b894b8c7a997d0176593bb4249984c3cd01/pirlygenes-3.5.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,707 Found link https://files.pythonhosted.org/packages/33/17/f44bcba8f107403c24713c54db0069b1c58cd3615b33e9fc1e2ea3c6a08e/pirlygenes-3.5.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 3.5.0 2026-04-07T17:07:55,708 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/fe/15/14dd692b6271ae9dd1b499e4eff8ff976ae1e1805cf9ae4508f28a03b94e/pirlygenes-3.6.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,709 Found link https://files.pythonhosted.org/packages/99/50/76bd9309b55c9aad5207ecb227e378a72598cde3dff280e893e0f86fc7b3/pirlygenes-3.6.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 3.6.0 2026-04-07T17:07:55,710 Fetching project page and analyzing links: https://www.piwheels.org/simple/pirlygenes/ 2026-04-07T17:07:55,710 Getting page https://www.piwheels.org/simple/pirlygenes/ 2026-04-07T17:07:55,711 Found index url https://www.piwheels.org/simple 2026-04-07T17:07:55,886 Fetched page https://www.piwheels.org/simple/pirlygenes/ as text/html 2026-04-07T17:07:55,895 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.14.0-py3-none-any.whl#sha256=057ce48582bffd44e37684068b1e64e750349609703d93d80efa875cb9b00d12 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,896 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.13.0-py3-none-any.whl#sha256=e13770f973755e3b8db3fc2f70e2d674dd6055486bb4c242b0663dc91da8137d (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,896 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.12.0-py3-none-any.whl#sha256=4186f04e1d7c70e23fa5546b20cdac46e49b68e86fc5bda42db5151921548f5d (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,897 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.11.0-py3-none-any.whl#sha256=fb3178b049345f9c0317f2836b267df8ff2b0f59ce7ddaf5dd9b25db24deae3d (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,897 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.10.0-py3-none-any.whl#sha256=393a743c2c0abdcbb8f787acfe60892c2335aa4a6be80038396dc5b27473274c (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,898 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.9.0-py3-none-any.whl#sha256=ca97e53c115bc9d06958ccce0494c60d942faba3dd044564ca15284523b8ec19 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,898 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.8.1-py3-none-any.whl#sha256=1b346af13b190e47650615724130b80dc1044b25269d3603013a7436e13f4ab6 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,899 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.8.0-py3-none-any.whl#sha256=9674c64aec5ff095f4fd209c995e33c4427c4029d9786a79177b3d1b837a6faf (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,899 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.7.1-py3-none-any.whl#sha256=711ccbff08ff3332a4caf4b1867ed739f0a4f59cd39dcdf7b2d2d46bb7bb12cb (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,900 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.7.0-py3-none-any.whl#sha256=c9b45dd5c01a5c24f9323fa0fbc8c32b9e70e49d7898e965ecd199ae56a992de (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,900 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.6.1-py3-none-any.whl#sha256=7f45bca601f637ca0bfa8466169c84685b60a3dd5fcb8d07132cd1fa4159f3a8 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,901 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.6.0-py3-none-any.whl#sha256=99581a72b34217d895a9e9377aebff39d3cccb34eea0c01f3056f29d8ea69479 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,902 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.5.1-py3-none-any.whl#sha256=b097b3f8b48f33c23fc888588f0644e92b3b973d37536ae992576cff3d2c550a (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,902 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.5.0-py3-none-any.whl#sha256=7ed846a4e0950617d0103bb8a51b54f0f00bfa982caa83c9013067f52251e39e (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,903 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.4.2-py3-none-any.whl#sha256=25793e34918b22dc36562123fdf4e753df72f9cc712aa69c1f151b96a09ab68a (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,903 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.4.1-py3-none-any.whl#sha256=a8a045cb5d44a0dc2d8d5b5d15f847d44c7fcbf4e65dfb65be5127275d30604c (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,903 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.4.0-py3-none-any.whl#sha256=06c550405b77c1a7f42776114270baca28b88844cd57d5a0f5e0ed554ee215dc (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,904 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.3.2-py3-none-any.whl#sha256=dc55fdcf24cb20e6e920706a735f11dc23aaaf50051f4a01414854d27c76e89f (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,904 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.3.1-py3-none-any.whl#sha256=c90c60420627308e8f538bbaa1306ced6e7699e82818b6016119c5b5661936b0 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,905 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.3.0-py3-none-any.whl#sha256=88bf981b5ba9b7fa0a46232499d049d3faafaf76e258e3d09e1b65ba9f97b22d (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,906 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.2.1-py3-none-any.whl#sha256=5327c129eaf178c76a60b5257dfe32546f0c09dd8881ddb296f458e11934ccf7 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,906 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.2.0-py3-none-any.whl#sha256=09718fb06f1ce838406a07641c7df1df1ff56ad9bcca5e70f0dabeabf18d9eb6 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,907 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.1.0-py3-none-any.whl#sha256=6e0978a40a4b6a16e6e44012574ac0838b0abf01a40770a2b4c8e7db2aa583a6 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,907 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.0.1-py3-none-any.whl#sha256=0956b5fd3f21d43dea90b38bbc06628b327c49504aa0fc53d3d81d55208c6f5f (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,908 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.0.0-py3-none-any.whl#sha256=de738501d014cdb6760b96e01afa7d18cb8dac3d863d433e9ce8fce0172641f5 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,909 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-1.9.0-py3-none-any.whl#sha256=3be90370a11cc9b33de80e02b84f99700133addc5994e35bcb8b80b76f09f8ae (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,909 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-1.8.1-py3-none-any.whl#sha256=35f8427ceac3714bb6339609b7f3602ea81ea8b5642c4e760931e9a28263a28b (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,910 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-1.8.0-py3-none-any.whl#sha256=202a232caf63d7ad6c6d202e8d8c6c3f52bb57aa7bd124b14be89597a4637f02 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,910 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-1.7.0-py3-none-any.whl#sha256=01a45cdf8948ae1d8a8034363ecd9357088d1df4c99ffb9370f8d68432ff4fa7 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-07T17:07:55,910 Skipping link: not a file: https://www.piwheels.org/simple/pirlygenes/ 2026-04-07T17:07:55,911 Skipping link: not a file: https://pypi.org/simple/pirlygenes/ 2026-04-07T17:07:55,935 Given no hashes to check 1 links for project 'pirlygenes': discarding no candidates 2026-04-07T17:07:55,955 Collecting pirlygenes==3.0.0 2026-04-07T17:07:55,957 Created temporary directory: /tmp/pip-unpack-luuv1tqr 2026-04-07T17:07:56,197 Downloading pirlygenes-3.0.0.tar.gz (4.9 MB) 2026-04-07T17:07:57,991 Added pirlygenes==3.0.0 from https://files.pythonhosted.org/packages/52/c6/b99e09d09e6fd528005a69015eb30c5993ba204329d4e94b6031f9fadaf2/pirlygenes-3.0.0.tar.gz to build tracker '/tmp/pip-build-tracker-t626wzu0' 2026-04-07T17:07:57,996 Created temporary directory: /tmp/pip-build-env-65um1m2k 2026-04-07T17:07:58,001 Installing build dependencies: started 2026-04-07T17:07:58,002 Running command pip subprocess to install build dependencies 2026-04-07T17:07:59,119 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-04-07T17:07:59,596 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-07T17:07:59,618 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-07T17:08:01,382 Collecting setuptools>=60 2026-04-07T17:08:01,462 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-04-07T17:08:01,835 Collecting setuptools-scm>=8.0 2026-04-07T17:08:01,849 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl (21 kB) 2026-04-07T17:08:01,930 Collecting vcs-versioning>=1.0.0.dev0 2026-04-07T17:08:01,946 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl (79 kB) 2026-04-07T17:08:02,125 Collecting packaging>=20 2026-04-07T17:08:02,140 Using cached https://www.piwheels.org/simple/packaging/packaging-26.0-py3-none-any.whl (74 kB) 2026-04-07T17:08:05,342 Installing collected packages: setuptools, packaging, vcs-versioning, setuptools-scm 2026-04-07T17:08:09,163 Creating /tmp/pip-build-env-65um1m2k/overlay/local/bin 2026-04-07T17:08:09,165 changing mode of /tmp/pip-build-env-65um1m2k/overlay/local/bin/vcs-versioning to 755 2026-04-07T17:08:09,274 changing mode of /tmp/pip-build-env-65um1m2k/overlay/local/bin/setuptools-scm to 755 2026-04-07T17:08:09,300 Successfully installed packaging-26.0 setuptools-82.0.1 setuptools-scm-10.0.5 vcs-versioning-1.1.1 2026-04-07T17:08:09,595 Installing build dependencies: finished with status 'done' 2026-04-07T17:08:09,614 Getting requirements to build wheel: started 2026-04-07T17:08:09,615 Running command Getting requirements to build wheel 2026-04-07T17:08:10,276 toml section missing PosixPath('pyproject.toml') does not contain any of the tool sections: ['setuptools_scm', 'vcs-versioning'] 2026-04-07T17:08:10,391 /tmp/pip-build-env-65um1m2k/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-07T17:08:10,392 !! 2026-04-07T17:08:10,393 ******************************************************************************** 2026-04-07T17:08:10,393 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-07T17:08:10,394 License :: OSI Approved :: Apache Software License 2026-04-07T17:08:10,395 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-07T17:08:10,396 ******************************************************************************** 2026-04-07T17:08:10,397 !! 2026-04-07T17:08:10,397 dist._finalize_license_expression() 2026-04-07T17:08:10,398 /tmp/pip-build-env-65um1m2k/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-07T17:08:10,398 !! 2026-04-07T17:08:10,399 ******************************************************************************** 2026-04-07T17:08:10,400 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-07T17:08:10,401 License :: OSI Approved :: Apache Software License 2026-04-07T17:08:10,402 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-07T17:08:10,402 ******************************************************************************** 2026-04-07T17:08:10,404 !! 2026-04-07T17:08:10,404 self._finalize_license_expression() 2026-04-07T17:08:10,407 running egg_info 2026-04-07T17:08:10,415 writing pirlygenes.egg-info/PKG-INFO 2026-04-07T17:08:10,419 writing dependency_links to pirlygenes.egg-info/dependency_links.txt 2026-04-07T17:08:10,421 writing entry points to pirlygenes.egg-info/entry_points.txt 2026-04-07T17:08:10,422 writing requirements to pirlygenes.egg-info/requires.txt 2026-04-07T17:08:10,423 writing top-level names to pirlygenes.egg-info/top_level.txt 2026-04-07T17:08:10,600 /tmp/pip-build-env-65um1m2k/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-04-07T17:08:10,600 return get_active_overrides().subprocess_timeout 2026-04-07T17:08:10,608 listing git files failed - pretending there aren't any 2026-04-07T17:08:10,618 reading manifest file 'pirlygenes.egg-info/SOURCES.txt' 2026-04-07T17:08:10,672 adding license file 'LICENSE' 2026-04-07T17:08:10,713 writing manifest file 'pirlygenes.egg-info/SOURCES.txt' 2026-04-07T17:08:10,819 Getting requirements to build wheel: finished with status 'done' 2026-04-07T17:08:10,822 Created temporary directory: /tmp/pip-modern-metadata-vq36m76f 2026-04-07T17:08:10,824 Preparing metadata (pyproject.toml): started 2026-04-07T17:08:10,826 Running command Preparing metadata (pyproject.toml) 2026-04-07T17:08:11,445 toml section missing PosixPath('pyproject.toml') does not contain any of the tool sections: ['setuptools_scm', 'vcs-versioning'] 2026-04-07T17:08:11,556 /tmp/pip-build-env-65um1m2k/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-07T17:08:11,557 !! 2026-04-07T17:08:11,558 ******************************************************************************** 2026-04-07T17:08:11,559 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-07T17:08:11,559 License :: OSI Approved :: Apache Software License 2026-04-07T17:08:11,560 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-07T17:08:11,561 ******************************************************************************** 2026-04-07T17:08:11,562 !! 2026-04-07T17:08:11,562 dist._finalize_license_expression() 2026-04-07T17:08:11,563 /tmp/pip-build-env-65um1m2k/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-07T17:08:11,563 !! 2026-04-07T17:08:11,564 ******************************************************************************** 2026-04-07T17:08:11,565 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-07T17:08:11,566 License :: OSI Approved :: Apache Software License 2026-04-07T17:08:11,566 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-07T17:08:11,567 ******************************************************************************** 2026-04-07T17:08:11,568 !! 2026-04-07T17:08:11,569 self._finalize_license_expression() 2026-04-07T17:08:11,572 running dist_info 2026-04-07T17:08:11,586 creating /tmp/pip-modern-metadata-vq36m76f/pirlygenes.egg-info 2026-04-07T17:08:11,587 writing /tmp/pip-modern-metadata-vq36m76f/pirlygenes.egg-info/PKG-INFO 2026-04-07T17:08:11,591 writing dependency_links to /tmp/pip-modern-metadata-vq36m76f/pirlygenes.egg-info/dependency_links.txt 2026-04-07T17:08:11,593 writing entry points to /tmp/pip-modern-metadata-vq36m76f/pirlygenes.egg-info/entry_points.txt 2026-04-07T17:08:11,594 writing requirements to /tmp/pip-modern-metadata-vq36m76f/pirlygenes.egg-info/requires.txt 2026-04-07T17:08:11,595 writing top-level names to /tmp/pip-modern-metadata-vq36m76f/pirlygenes.egg-info/top_level.txt 2026-04-07T17:08:11,597 writing manifest file '/tmp/pip-modern-metadata-vq36m76f/pirlygenes.egg-info/SOURCES.txt' 2026-04-07T17:08:11,684 /tmp/pip-build-env-65um1m2k/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-04-07T17:08:11,685 return get_active_overrides().subprocess_timeout 2026-04-07T17:08:11,691 listing git files failed - pretending there aren't any 2026-04-07T17:08:11,699 reading manifest file '/tmp/pip-modern-metadata-vq36m76f/pirlygenes.egg-info/SOURCES.txt' 2026-04-07T17:08:11,701 adding license file 'LICENSE' 2026-04-07T17:08:11,705 writing manifest file '/tmp/pip-modern-metadata-vq36m76f/pirlygenes.egg-info/SOURCES.txt' 2026-04-07T17:08:11,706 creating '/tmp/pip-modern-metadata-vq36m76f/pirlygenes-3.0.0.dist-info' 2026-04-07T17:08:11,844 Preparing metadata (pyproject.toml): finished with status 'done' 2026-04-07T17:08:11,850 Source in /tmp/pip-wheel-6pydtljj/pirlygenes_1f905e263d564f3cb012e377989c6939 has version 3.0.0, which satisfies requirement pirlygenes==3.0.0 from https://files.pythonhosted.org/packages/52/c6/b99e09d09e6fd528005a69015eb30c5993ba204329d4e94b6031f9fadaf2/pirlygenes-3.0.0.tar.gz 2026-04-07T17:08:11,851 Removed pirlygenes==3.0.0 from https://files.pythonhosted.org/packages/52/c6/b99e09d09e6fd528005a69015eb30c5993ba204329d4e94b6031f9fadaf2/pirlygenes-3.0.0.tar.gz from build tracker '/tmp/pip-build-tracker-t626wzu0' 2026-04-07T17:08:11,859 Created temporary directory: /tmp/pip-unpack-m5b9jnn5 2026-04-07T17:08:11,859 Building wheels for collected packages: pirlygenes 2026-04-07T17:08:11,864 Created temporary directory: /tmp/pip-wheel-wj9mr_vp 2026-04-07T17:08:11,864 Destination directory: /tmp/pip-wheel-wj9mr_vp 2026-04-07T17:08:11,866 Building wheel for pirlygenes (pyproject.toml): started 2026-04-07T17:08:11,867 Running command Building wheel for pirlygenes (pyproject.toml) 2026-04-07T17:08:12,475 toml section missing PosixPath('pyproject.toml') does not contain any of the tool sections: ['setuptools_scm', 'vcs-versioning'] 2026-04-07T17:08:12,580 /tmp/pip-build-env-65um1m2k/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-07T17:08:12,580 !! 2026-04-07T17:08:12,581 ******************************************************************************** 2026-04-07T17:08:12,582 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-07T17:08:12,583 License :: OSI Approved :: Apache Software License 2026-04-07T17:08:12,583 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-07T17:08:12,584 ******************************************************************************** 2026-04-07T17:08:12,585 !! 2026-04-07T17:08:12,585 dist._finalize_license_expression() 2026-04-07T17:08:12,586 /tmp/pip-build-env-65um1m2k/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-07T17:08:12,587 !! 2026-04-07T17:08:12,588 ******************************************************************************** 2026-04-07T17:08:12,588 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-07T17:08:12,590 License :: OSI Approved :: Apache Software License 2026-04-07T17:08:12,591 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-07T17:08:12,592 ******************************************************************************** 2026-04-07T17:08:12,593 !! 2026-04-07T17:08:12,593 self._finalize_license_expression() 2026-04-07T17:08:12,594 running bdist_wheel 2026-04-07T17:08:12,616 running build 2026-04-07T17:08:12,616 running build_py 2026-04-07T17:08:12,618 creating build/lib/pirlygenes 2026-04-07T17:08:12,620 copying pirlygenes/version.py -> build/lib/pirlygenes 2026-04-07T17:08:12,622 copying pirlygenes/plot_data_helpers.py -> build/lib/pirlygenes 2026-04-07T17:08:12,625 copying pirlygenes/aggregate_gene_expression.py -> build/lib/pirlygenes 2026-04-07T17:08:12,627 copying pirlygenes/cli.py -> build/lib/pirlygenes 2026-04-07T17:08:12,629 copying pirlygenes/gene_sets_old.py -> build/lib/pirlygenes 2026-04-07T17:08:12,631 copying pirlygenes/plot.py -> build/lib/pirlygenes 2026-04-07T17:08:12,634 copying pirlygenes/gene_names.py -> build/lib/pirlygenes 2026-04-07T17:08:12,636 copying pirlygenes/gene_sets_cancer.py -> build/lib/pirlygenes 2026-04-07T17:08:12,639 copying pirlygenes/gene_ids.py -> build/lib/pirlygenes 2026-04-07T17:08:12,641 copying pirlygenes/common.py -> build/lib/pirlygenes 2026-04-07T17:08:12,643 copying pirlygenes/__init__.py -> build/lib/pirlygenes 2026-04-07T17:08:12,644 copying pirlygenes/load_dataset.py -> build/lib/pirlygenes 2026-04-07T17:08:12,646 copying pirlygenes/load_expression.py -> build/lib/pirlygenes 2026-04-07T17:08:12,648 copying pirlygenes/transcript_to_gene.py -> build/lib/pirlygenes 2026-04-07T17:08:12,650 running egg_info 2026-04-07T17:08:12,665 writing pirlygenes.egg-info/PKG-INFO 2026-04-07T17:08:12,668 writing dependency_links to pirlygenes.egg-info/dependency_links.txt 2026-04-07T17:08:12,670 writing entry points to pirlygenes.egg-info/entry_points.txt 2026-04-07T17:08:12,671 writing requirements to pirlygenes.egg-info/requires.txt 2026-04-07T17:08:12,672 writing top-level names to pirlygenes.egg-info/top_level.txt 2026-04-07T17:08:12,701 /tmp/pip-build-env-65um1m2k/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-04-07T17:08:12,702 return get_active_overrides().subprocess_timeout 2026-04-07T17:08:12,708 listing git files failed - pretending there aren't any 2026-04-07T17:08:12,715 reading manifest file 'pirlygenes.egg-info/SOURCES.txt' 2026-04-07T17:08:12,720 adding license file 'LICENSE' 2026-04-07T17:08:12,725 writing manifest file 'pirlygenes.egg-info/SOURCES.txt' 2026-04-07T17:08:12,728 /tmp/pip-build-env-65um1m2k/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'pirlygenes.data' is absent from the `packages` configuration. 2026-04-07T17:08:12,728 !! 2026-04-07T17:08:12,729 ******************************************************************************** 2026-04-07T17:08:12,730 ############################ 2026-04-07T17:08:12,730 # Package would be ignored # 2026-04-07T17:08:12,731 ############################ 2026-04-07T17:08:12,731 Python recognizes 'pirlygenes.data' as an importable package[^1], 2026-04-07T17:08:12,731 but it is absent from setuptools' `packages` configuration. 2026-04-07T17:08:12,732 This leads to an ambiguous overall configuration. If you want to distribute this 2026-04-07T17:08:12,733 package, please make sure that 'pirlygenes.data' is explicitly added 2026-04-07T17:08:12,733 to the `packages` configuration field. 2026-04-07T17:08:12,734 Alternatively, you can also rely on setuptools' discovery methods 2026-04-07T17:08:12,735 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-04-07T17:08:12,735 instead of `find_packages(...)`/`find:`). 2026-04-07T17:08:12,736 You can read more about "package discovery" on setuptools documentation page: 2026-04-07T17:08:12,737 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-04-07T17:08:12,738 If you don't want 'pirlygenes.data' to be distributed and are 2026-04-07T17:08:12,739 already explicitly excluding 'pirlygenes.data' via 2026-04-07T17:08:12,740 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-04-07T17:08:12,740 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-04-07T17:08:12,741 combination with a more fine grained `package-data` configuration. 2026-04-07T17:08:12,742 You can read more about "package data files" on setuptools documentation page: 2026-04-07T17:08:12,743 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-04-07T17:08:12,744 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-04-07T17:08:12,745 even if it does not contain any `.py` files. 2026-04-07T17:08:12,745 On the other hand, currently there is no concept of package data 2026-04-07T17:08:12,746 directory, all directories are treated like packages. 2026-04-07T17:08:12,746 ******************************************************************************** 2026-04-07T17:08:12,747 !! 2026-04-07T17:08:12,748 check.warn(importable) 2026-04-07T17:08:12,749 copying pirlygenes/PLAN-1.4.0-radioligand.md -> build/lib/pirlygenes 2026-04-07T17:08:12,749 creating build/lib/pirlygenes/data 2026-04-07T17:08:12,750 copying pirlygenes/data/ADC-approved.csv -> build/lib/pirlygenes/data 2026-04-07T17:08:12,750 copying pirlygenes/data/ADC-trials.csv -> build/lib/pirlygenes/data 2026-04-07T17:08:12,751 copying pirlygenes/data/ADC-withdrawn.csv -> build/lib/pirlygenes/data 2026-04-07T17:08:12,752 copying pirlygenes/data/CAR-T-approved.csv -> build/lib/pirlygenes/data 2026-04-07T17:08:12,752 copying pirlygenes/data/TCR-T-approved.csv -> build/lib/pirlygenes/data 2026-04-07T17:08:12,753 copying pirlygenes/data/TCR-T-trials.csv -> build/lib/pirlygenes/data 2026-04-07T17:08:12,754 copying pirlygenes/data/bispecific-antibodies-approved.csv -> build/lib/pirlygenes/data 2026-04-07T17:08:12,757 copying pirlygenes/data/cancer-driver-genes.csv -> build/lib/pirlygenes/data 2026-04-07T17:08:12,760 copying pirlygenes/data/cancer-driver-variants.csv -> build/lib/pirlygenes/data 2026-04-07T17:08:12,763 copying pirlygenes/data/cancer-surfaceome.csv -> build/lib/pirlygenes/data 2026-04-07T17:08:12,766 copying pirlygenes/data/cancer-testis-antigens.csv -> build/lib/pirlygenes/data 2026-04-07T17:08:12,770 copying pirlygenes/data/cancer-type-genes.csv -> build/lib/pirlygenes/data 2026-04-07T17:08:12,773 copying pirlygenes/data/class1-mhc-presentation-pathway.csv -> build/lib/pirlygenes/data 2026-04-07T17:08:12,775 copying pirlygenes/data/gene-sets.csv -> build/lib/pirlygenes/data 2026-04-07T17:08:12,777 copying pirlygenes/data/housekeeping-genes.csv -> build/lib/pirlygenes/data 2026-04-07T17:08:12,780 copying pirlygenes/data/interferon-response.csv -> build/lib/pirlygenes/data 2026-04-07T17:08:12,783 copying pirlygenes/data/multispecific-tcell-engager-trials.csv -> build/lib/pirlygenes/data 2026-04-07T17:08:12,785 copying pirlygenes/data/pan-cancer-expression.csv -> build/lib/pirlygenes/data 2026-04-07T17:08:12,999 copying pirlygenes/data/radioligand-targets.csv -> build/lib/pirlygenes/data 2026-04-07T17:08:13,002 copying pirlygenes/data/surface-proteins.csv -> build/lib/pirlygenes/data 2026-04-07T17:08:13,023 installing to build/bdist.linux-armv7l/wheel 2026-04-07T17:08:13,024 running install 2026-04-07T17:08:13,046 running install_lib 2026-04-07T17:08:13,054 creating build/bdist.linux-armv7l/wheel 2026-04-07T17:08:13,056 creating build/bdist.linux-armv7l/wheel/pirlygenes 2026-04-07T17:08:13,057 copying build/lib/pirlygenes/version.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-07T17:08:13,060 copying build/lib/pirlygenes/plot_data_helpers.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-07T17:08:13,062 copying build/lib/pirlygenes/aggregate_gene_expression.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-07T17:08:13,064 copying build/lib/pirlygenes/cli.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-07T17:08:13,066 copying build/lib/pirlygenes/PLAN-1.4.0-radioligand.md -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-07T17:08:13,069 creating build/bdist.linux-armv7l/wheel/pirlygenes/data 2026-04-07T17:08:13,070 copying build/lib/pirlygenes/data/ADC-approved.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T17:08:13,072 copying build/lib/pirlygenes/data/gene-sets.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T17:08:13,073 copying build/lib/pirlygenes/data/class1-mhc-presentation-pathway.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T17:08:13,075 copying build/lib/pirlygenes/data/cancer-driver-genes.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T17:08:13,078 copying build/lib/pirlygenes/data/housekeeping-genes.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T17:08:13,080 copying build/lib/pirlygenes/data/pan-cancer-expression.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T17:08:13,407 copying build/lib/pirlygenes/data/TCR-T-approved.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T17:08:13,409 copying build/lib/pirlygenes/data/TCR-T-trials.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T17:08:13,412 copying build/lib/pirlygenes/data/interferon-response.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T17:08:13,414 copying build/lib/pirlygenes/data/CAR-T-approved.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T17:08:13,416 copying build/lib/pirlygenes/data/surface-proteins.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T17:08:13,424 copying build/lib/pirlygenes/data/cancer-testis-antigens.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T17:08:13,427 copying build/lib/pirlygenes/data/ADC-withdrawn.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T17:08:13,429 copying build/lib/pirlygenes/data/cancer-type-genes.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T17:08:13,432 copying build/lib/pirlygenes/data/ADC-trials.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T17:08:13,436 copying build/lib/pirlygenes/data/cancer-driver-variants.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T17:08:13,438 copying build/lib/pirlygenes/data/radioligand-targets.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T17:08:13,440 copying build/lib/pirlygenes/data/bispecific-antibodies-approved.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T17:08:13,442 copying build/lib/pirlygenes/data/multispecific-tcell-engager-trials.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T17:08:13,444 copying build/lib/pirlygenes/data/cancer-surfaceome.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-07T17:08:13,446 copying build/lib/pirlygenes/gene_sets_old.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-07T17:08:13,448 copying build/lib/pirlygenes/plot.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-07T17:08:13,451 copying build/lib/pirlygenes/gene_names.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-07T17:08:13,453 copying build/lib/pirlygenes/gene_sets_cancer.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-07T17:08:13,456 copying build/lib/pirlygenes/gene_ids.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-07T17:08:13,459 copying build/lib/pirlygenes/common.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-07T17:08:13,461 copying build/lib/pirlygenes/__init__.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-07T17:08:13,462 copying build/lib/pirlygenes/load_dataset.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-07T17:08:13,465 copying build/lib/pirlygenes/load_expression.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-07T17:08:13,467 copying build/lib/pirlygenes/transcript_to_gene.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-07T17:08:13,469 running install_egg_info 2026-04-07T17:08:13,477 Copying pirlygenes.egg-info to build/bdist.linux-armv7l/wheel/./pirlygenes-3.0.0-py3.11.egg-info 2026-04-07T17:08:13,489 running install_scripts 2026-04-07T17:08:13,502 creating build/bdist.linux-armv7l/wheel/pirlygenes-3.0.0.dist-info/WHEEL 2026-04-07T17:08:13,505 creating '/tmp/pip-wheel-wj9mr_vp/.tmp-923t2yfv/pirlygenes-3.0.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-04-07T17:08:13,508 adding 'pirlygenes/PLAN-1.4.0-radioligand.md' 2026-04-07T17:08:13,510 adding 'pirlygenes/__init__.py' 2026-04-07T17:08:13,512 adding 'pirlygenes/aggregate_gene_expression.py' 2026-04-07T17:08:13,514 adding 'pirlygenes/cli.py' 2026-04-07T17:08:13,516 adding 'pirlygenes/common.py' 2026-04-07T17:08:13,518 adding 'pirlygenes/gene_ids.py' 2026-04-07T17:08:13,520 adding 'pirlygenes/gene_names.py' 2026-04-07T17:08:13,524 adding 'pirlygenes/gene_sets_cancer.py' 2026-04-07T17:08:13,526 adding 'pirlygenes/gene_sets_old.py' 2026-04-07T17:08:13,528 adding 'pirlygenes/load_dataset.py' 2026-04-07T17:08:13,530 adding 'pirlygenes/load_expression.py' 2026-04-07T17:08:13,534 adding 'pirlygenes/plot.py' 2026-04-07T17:08:13,537 adding 'pirlygenes/plot_data_helpers.py' 2026-04-07T17:08:13,539 adding 'pirlygenes/transcript_to_gene.py' 2026-04-07T17:08:13,541 adding 'pirlygenes/version.py' 2026-04-07T17:08:13,543 adding 'pirlygenes/data/ADC-approved.csv' 2026-04-07T17:08:13,548 adding 'pirlygenes/data/ADC-trials.csv' 2026-04-07T17:08:13,550 adding 'pirlygenes/data/ADC-withdrawn.csv' 2026-04-07T17:08:13,552 adding 'pirlygenes/data/CAR-T-approved.csv' 2026-04-07T17:08:13,553 adding 'pirlygenes/data/TCR-T-approved.csv' 2026-04-07T17:08:13,557 adding 'pirlygenes/data/TCR-T-trials.csv' 2026-04-07T17:08:13,559 adding 'pirlygenes/data/bispecific-antibodies-approved.csv' 2026-04-07T17:08:13,564 adding 'pirlygenes/data/cancer-driver-genes.csv' 2026-04-07T17:08:13,567 adding 'pirlygenes/data/cancer-driver-variants.csv' 2026-04-07T17:08:13,569 adding 'pirlygenes/data/cancer-surfaceome.csv' 2026-04-07T17:08:13,576 adding 'pirlygenes/data/cancer-testis-antigens.csv' 2026-04-07T17:08:13,578 adding 'pirlygenes/data/cancer-type-genes.csv' 2026-04-07T17:08:13,580 adding 'pirlygenes/data/class1-mhc-presentation-pathway.csv' 2026-04-07T17:08:13,582 adding 'pirlygenes/data/gene-sets.csv' 2026-04-07T17:08:13,583 adding 'pirlygenes/data/housekeeping-genes.csv' 2026-04-07T17:08:13,585 adding 'pirlygenes/data/interferon-response.csv' 2026-04-07T17:08:13,587 adding 'pirlygenes/data/multispecific-tcell-engager-trials.csv' 2026-04-07T17:08:16,698 adding 'pirlygenes/data/pan-cancer-expression.csv' 2026-04-07T17:08:16,771 adding 'pirlygenes/data/radioligand-targets.csv' 2026-04-07T17:08:16,793 adding 'pirlygenes/data/surface-proteins.csv' 2026-04-07T17:08:16,799 adding 'pirlygenes-3.0.0.dist-info/licenses/LICENSE' 2026-04-07T17:08:16,802 adding 'pirlygenes-3.0.0.dist-info/METADATA' 2026-04-07T17:08:16,803 adding 'pirlygenes-3.0.0.dist-info/WHEEL' 2026-04-07T17:08:16,804 adding 'pirlygenes-3.0.0.dist-info/entry_points.txt' 2026-04-07T17:08:16,806 adding 'pirlygenes-3.0.0.dist-info/top_level.txt' 2026-04-07T17:08:16,807 adding 'pirlygenes-3.0.0.dist-info/RECORD' 2026-04-07T17:08:16,862 removing build/bdist.linux-armv7l/wheel 2026-04-07T17:08:16,988 Building wheel for pirlygenes (pyproject.toml): finished with status 'done' 2026-04-07T17:08:17,039 Created wheel for pirlygenes: filename=pirlygenes-3.0.0-py3-none-any.whl size=4194653 sha256=40b6b1094f878a48f7ccf12418b061fe33d3a8fd773093523159c983af518352 2026-04-07T17:08:17,041 Stored in directory: /tmp/pip-ephem-wheel-cache-e1gmbqej/wheels/2d/b2/0a/36f6d258c286056a4cdb61a56ee5fe5cfdff692d058a737578 2026-04-07T17:08:17,056 Successfully built pirlygenes 2026-04-07T17:08:17,201 Removed build tracker: '/tmp/pip-build-tracker-t626wzu0'