2026-04-08T03:19:49,452 Created temporary directory: /tmp/pip-ephem-wheel-cache-s27qqog9 2026-04-08T03:19:49,453 Created temporary directory: /tmp/pip-build-tracker-si3p4x0a 2026-04-08T03:19:49,454 Initialized build tracking at /tmp/pip-build-tracker-si3p4x0a 2026-04-08T03:19:49,455 Created build tracker: /tmp/pip-build-tracker-si3p4x0a 2026-04-08T03:19:49,455 Entered build tracker: /tmp/pip-build-tracker-si3p4x0a 2026-04-08T03:19:49,456 Created temporary directory: /tmp/pip-wheel-ezb56pe1 2026-04-08T03:19:49,459 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-08T03:19:49,462 Created temporary directory: /tmp/pip-ephem-wheel-cache-v9c41fcj 2026-04-08T03:19:49,484 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-08T03:19:49,488 2 location(s) to search for versions of meds-transforms: 2026-04-08T03:19:49,488 * https://pypi.org/simple/meds-transforms/ 2026-04-08T03:19:49,488 * https://www.piwheels.org/simple/meds-transforms/ 2026-04-08T03:19:49,489 Fetching project page and analyzing links: https://pypi.org/simple/meds-transforms/ 2026-04-08T03:19:49,490 Getting page https://pypi.org/simple/meds-transforms/ 2026-04-08T03:19:49,491 Found index url https://pypi.org/simple 2026-04-08T03:19:49,734 Fetched page https://pypi.org/simple/meds-transforms/ as application/vnd.pypi.simple.v1+json 2026-04-08T03:19:49,745 Skipping link: No binaries permitted for meds-transforms: 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(requires-python:>=3.11), version: 0.6.2 2026-04-08T03:19:49,793 Skipping link: No binaries permitted for meds-transforms: https://files.pythonhosted.org/packages/a1/36/10009e5522f6359186b5bc200180dfefe854ff1f3dfbcb6e7f42ace5d8cf/meds_transforms-0.6.3-py3-none-any.whl (from https://pypi.org/simple/meds-transforms/) (requires-python:>=3.11) 2026-04-08T03:19:49,794 Found link https://files.pythonhosted.org/packages/60/a7/b99f69a275c76ac10577c3687bfbdabaa59f8748257e0e6c6ba20a79fe7d/meds_transforms-0.6.3.tar.gz (from https://pypi.org/simple/meds-transforms/) (requires-python:>=3.11), version: 0.6.3 2026-04-08T03:19:49,795 Fetching project page and analyzing links: https://www.piwheels.org/simple/meds-transforms/ 2026-04-08T03:19:49,796 Getting page https://www.piwheels.org/simple/meds-transforms/ 2026-04-08T03:19:49,797 Found index url https://www.piwheels.org/simple 2026-04-08T03:19:49,982 Fetched page https://www.piwheels.org/simple/meds-transforms/ as text/html 2026-04-08T03:19:49,991 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2026-04-08T03:19:50,007 Skipping link: not a file: https://pypi.org/simple/meds-transforms/ 2026-04-08T03:19:50,030 Given no hashes to check 1 links for project 'meds-transforms': discarding no candidates 2026-04-08T03:19:50,049 Collecting meds-transforms==0.6.3 2026-04-08T03:19:50,052 Created temporary directory: /tmp/pip-unpack-f2fu31do 2026-04-08T03:19:50,301 Downloading meds_transforms-0.6.3.tar.gz (431 kB) 2026-04-08T03:19:51,008 Added meds-transforms==0.6.3 from https://files.pythonhosted.org/packages/60/a7/b99f69a275c76ac10577c3687bfbdabaa59f8748257e0e6c6ba20a79fe7d/meds_transforms-0.6.3.tar.gz to build tracker '/tmp/pip-build-tracker-si3p4x0a' 2026-04-08T03:19:51,019 Created temporary directory: /tmp/pip-build-env-qrxym6pw 2026-04-08T03:19:51,025 Installing build dependencies: started 2026-04-08T03:19:51,027 Running command pip subprocess to install build dependencies 2026-04-08T03:19:52,231 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-04-08T03:19:52,718 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-08T03:19:52,742 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-08T03:19:54,951 Collecting setuptools>=64 2026-04-08T03:19:55,068 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-04-08T03:19:55,562 Collecting setuptools-scm>=8.0 2026-04-08T03:19:55,582 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl (21 kB) 2026-04-08T03:19:55,830 Collecting wheel 2026-04-08T03:19:55,846 Using cached https://www.piwheels.org/simple/wheel/wheel-0.46.3-py3-none-any.whl (30 kB) 2026-04-08T03:19:55,937 Collecting vcs-versioning>=1.0.0.dev0 2026-04-08T03:19:55,957 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl (79 kB) 2026-04-08T03:19:56,147 Collecting packaging>=20 2026-04-08T03:19:56,163 Using cached https://www.piwheels.org/simple/packaging/packaging-26.0-py3-none-any.whl (74 kB) 2026-04-08T03:19:59,504 Installing collected packages: setuptools, packaging, wheel, vcs-versioning, setuptools-scm 2026-04-08T03:20:03,166 Creating /tmp/pip-build-env-qrxym6pw/overlay/local/bin 2026-04-08T03:20:03,168 changing mode of /tmp/pip-build-env-qrxym6pw/overlay/local/bin/wheel to 755 2026-04-08T03:20:03,478 changing mode of /tmp/pip-build-env-qrxym6pw/overlay/local/bin/vcs-versioning to 755 2026-04-08T03:20:03,585 changing mode of /tmp/pip-build-env-qrxym6pw/overlay/local/bin/setuptools-scm to 755 2026-04-08T03:20:03,619 Successfully installed packaging-26.0 setuptools-82.0.1 setuptools-scm-10.0.5 vcs-versioning-1.1.1 wheel-0.46.3 2026-04-08T03:20:03,908 Installing build dependencies: finished with status 'done' 2026-04-08T03:20:03,915 Getting requirements to build wheel: started 2026-04-08T03:20:03,917 Running command Getting requirements to build wheel 2026-04-08T03:20:04,733 /tmp/pip-build-env-qrxym6pw/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-08T03:20:04,734 !! 2026-04-08T03:20:04,735 ******************************************************************************** 2026-04-08T03:20:04,735 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-08T03:20:04,737 License :: OSI Approved :: MIT License 2026-04-08T03:20:04,738 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-08T03:20:04,739 ******************************************************************************** 2026-04-08T03:20:04,740 !! 2026-04-08T03:20:04,740 dist._finalize_license_expression() 2026-04-08T03:20:04,741 /tmp/pip-build-env-qrxym6pw/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-08T03:20:04,742 !! 2026-04-08T03:20:04,743 ******************************************************************************** 2026-04-08T03:20:04,743 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-08T03:20:04,744 License :: OSI Approved :: MIT License 2026-04-08T03:20:04,745 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-08T03:20:04,746 ******************************************************************************** 2026-04-08T03:20:04,747 !! 2026-04-08T03:20:04,747 self._finalize_license_expression() 2026-04-08T03:20:04,774 running egg_info 2026-04-08T03:20:04,781 writing src/MEDS_transforms.egg-info/PKG-INFO 2026-04-08T03:20:04,788 writing dependency_links to src/MEDS_transforms.egg-info/dependency_links.txt 2026-04-08T03:20:04,791 writing entry points to src/MEDS_transforms.egg-info/entry_points.txt 2026-04-08T03:20:04,794 writing requirements to src/MEDS_transforms.egg-info/requires.txt 2026-04-08T03:20:04,796 writing top-level names to src/MEDS_transforms.egg-info/top_level.txt 2026-04-08T03:20:04,876 /tmp/pip-build-env-qrxym6pw/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-04-08T03:20:04,876 return get_active_overrides().subprocess_timeout 2026-04-08T03:20:04,884 listing git files failed - pretending there aren't any 2026-04-08T03:20:04,889 reading manifest file 'src/MEDS_transforms.egg-info/SOURCES.txt' 2026-04-08T03:20:04,909 adding license file 'LICENSE' 2026-04-08T03:20:04,920 writing manifest file 'src/MEDS_transforms.egg-info/SOURCES.txt' 2026-04-08T03:20:05,024 Getting requirements to build wheel: finished with status 'done' 2026-04-08T03:20:05,028 Created temporary directory: /tmp/pip-modern-metadata-xv7uuezq 2026-04-08T03:20:05,031 Preparing metadata (pyproject.toml): started 2026-04-08T03:20:05,032 Running command Preparing metadata (pyproject.toml) 2026-04-08T03:20:05,813 /tmp/pip-build-env-qrxym6pw/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-08T03:20:05,813 !! 2026-04-08T03:20:05,814 ******************************************************************************** 2026-04-08T03:20:05,815 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-08T03:20:05,816 License :: OSI Approved :: MIT License 2026-04-08T03:20:05,817 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-08T03:20:05,818 ******************************************************************************** 2026-04-08T03:20:05,819 !! 2026-04-08T03:20:05,819 dist._finalize_license_expression() 2026-04-08T03:20:05,820 /tmp/pip-build-env-qrxym6pw/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-08T03:20:05,820 !! 2026-04-08T03:20:05,821 ******************************************************************************** 2026-04-08T03:20:05,822 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-08T03:20:05,823 License :: OSI Approved :: MIT License 2026-04-08T03:20:05,824 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-08T03:20:05,824 ******************************************************************************** 2026-04-08T03:20:05,825 !! 2026-04-08T03:20:05,826 self._finalize_license_expression() 2026-04-08T03:20:05,841 running dist_info 2026-04-08T03:20:05,855 creating /tmp/pip-modern-metadata-xv7uuezq/MEDS_transforms.egg-info 2026-04-08T03:20:05,855 writing /tmp/pip-modern-metadata-xv7uuezq/MEDS_transforms.egg-info/PKG-INFO 2026-04-08T03:20:05,862 writing dependency_links to /tmp/pip-modern-metadata-xv7uuezq/MEDS_transforms.egg-info/dependency_links.txt 2026-04-08T03:20:05,865 writing entry points to /tmp/pip-modern-metadata-xv7uuezq/MEDS_transforms.egg-info/entry_points.txt 2026-04-08T03:20:05,868 writing requirements to /tmp/pip-modern-metadata-xv7uuezq/MEDS_transforms.egg-info/requires.txt 2026-04-08T03:20:05,870 writing top-level names to /tmp/pip-modern-metadata-xv7uuezq/MEDS_transforms.egg-info/top_level.txt 2026-04-08T03:20:05,871 writing manifest file '/tmp/pip-modern-metadata-xv7uuezq/MEDS_transforms.egg-info/SOURCES.txt' 2026-04-08T03:20:05,941 /tmp/pip-build-env-qrxym6pw/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-04-08T03:20:05,941 return get_active_overrides().subprocess_timeout 2026-04-08T03:20:05,948 listing git files failed - pretending there aren't any 2026-04-08T03:20:05,953 reading manifest file '/tmp/pip-modern-metadata-xv7uuezq/MEDS_transforms.egg-info/SOURCES.txt' 2026-04-08T03:20:05,955 adding license file 'LICENSE' 2026-04-08T03:20:05,960 writing manifest file '/tmp/pip-modern-metadata-xv7uuezq/MEDS_transforms.egg-info/SOURCES.txt' 2026-04-08T03:20:05,961 creating '/tmp/pip-modern-metadata-xv7uuezq/meds_transforms-0.6.3.dist-info' 2026-04-08T03:20:06,094 Preparing metadata (pyproject.toml): finished with status 'done' 2026-04-08T03:20:06,100 Source in /tmp/pip-wheel-ezb56pe1/meds-transforms_5ac752431f9447a29c9e9b865d21a7a2 has version 0.6.3, which satisfies requirement meds-transforms==0.6.3 from https://files.pythonhosted.org/packages/60/a7/b99f69a275c76ac10577c3687bfbdabaa59f8748257e0e6c6ba20a79fe7d/meds_transforms-0.6.3.tar.gz 2026-04-08T03:20:06,101 Removed meds-transforms==0.6.3 from https://files.pythonhosted.org/packages/60/a7/b99f69a275c76ac10577c3687bfbdabaa59f8748257e0e6c6ba20a79fe7d/meds_transforms-0.6.3.tar.gz from build tracker '/tmp/pip-build-tracker-si3p4x0a' 2026-04-08T03:20:06,108 Created temporary directory: /tmp/pip-unpack-77agm045 2026-04-08T03:20:06,109 Building wheels for collected packages: meds-transforms 2026-04-08T03:20:06,113 Created temporary directory: /tmp/pip-wheel-94ui8i4u 2026-04-08T03:20:06,114 Destination directory: /tmp/pip-wheel-94ui8i4u 2026-04-08T03:20:06,116 Building wheel for meds-transforms (pyproject.toml): started 2026-04-08T03:20:06,117 Running command Building wheel for meds-transforms (pyproject.toml) 2026-04-08T03:20:06,829 /tmp/pip-build-env-qrxym6pw/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-08T03:20:06,829 !! 2026-04-08T03:20:06,830 ******************************************************************************** 2026-04-08T03:20:06,831 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-08T03:20:06,832 License :: OSI Approved :: MIT License 2026-04-08T03:20:06,833 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-08T03:20:06,834 ******************************************************************************** 2026-04-08T03:20:06,835 !! 2026-04-08T03:20:06,835 dist._finalize_license_expression() 2026-04-08T03:20:06,836 /tmp/pip-build-env-qrxym6pw/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-08T03:20:06,836 !! 2026-04-08T03:20:06,838 ******************************************************************************** 2026-04-08T03:20:06,839 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-08T03:20:06,840 License :: OSI Approved :: MIT License 2026-04-08T03:20:06,841 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-08T03:20:06,841 ******************************************************************************** 2026-04-08T03:20:06,843 !! 2026-04-08T03:20:06,844 self._finalize_license_expression() 2026-04-08T03:20:06,853 running bdist_wheel 2026-04-08T03:20:06,878 running build 2026-04-08T03:20:06,879 running build_py 2026-04-08T03:20:06,880 creating build/lib/MEDS_transforms 2026-04-08T03:20:06,882 copying src/MEDS_transforms/__main__.py -> build/lib/MEDS_transforms 2026-04-08T03:20:06,884 copying src/MEDS_transforms/parser.py -> build/lib/MEDS_transforms 2026-04-08T03:20:06,887 copying src/MEDS_transforms/__init__.py -> build/lib/MEDS_transforms 2026-04-08T03:20:06,889 copying src/MEDS_transforms/pytest_plugin.py -> build/lib/MEDS_transforms 2026-04-08T03:20:06,891 copying src/MEDS_transforms/runner.py -> build/lib/MEDS_transforms 2026-04-08T03:20:06,894 copying src/MEDS_transforms/utils.py -> build/lib/MEDS_transforms 2026-04-08T03:20:06,897 creating build/lib/MEDS_transforms/configs 2026-04-08T03:20:06,898 copying src/MEDS_transforms/configs/__init__.py -> build/lib/MEDS_transforms/configs 2026-04-08T03:20:06,900 copying src/MEDS_transforms/configs/dataset.py -> build/lib/MEDS_transforms/configs 2026-04-08T03:20:06,902 copying src/MEDS_transforms/configs/pipeline.py -> build/lib/MEDS_transforms/configs 2026-04-08T03:20:06,905 copying src/MEDS_transforms/configs/utils.py -> build/lib/MEDS_transforms/configs 2026-04-08T03:20:06,907 copying src/MEDS_transforms/configs/stage.py -> build/lib/MEDS_transforms/configs 2026-04-08T03:20:06,910 creating build/lib/MEDS_transforms/mapreduce 2026-04-08T03:20:06,911 copying src/MEDS_transforms/mapreduce/rwlock.py -> build/lib/MEDS_transforms/mapreduce 2026-04-08T03:20:06,913 copying src/MEDS_transforms/mapreduce/shard_iteration.py -> build/lib/MEDS_transforms/mapreduce 2026-04-08T03:20:06,916 copying src/MEDS_transforms/mapreduce/__init__.py -> build/lib/MEDS_transforms/mapreduce 2026-04-08T03:20:06,918 copying src/MEDS_transforms/mapreduce/mapper.py -> build/lib/MEDS_transforms/mapreduce 2026-04-08T03:20:06,920 copying src/MEDS_transforms/mapreduce/reducer.py -> build/lib/MEDS_transforms/mapreduce 2026-04-08T03:20:06,922 copying src/MEDS_transforms/mapreduce/stage.py -> build/lib/MEDS_transforms/mapreduce 2026-04-08T03:20:06,926 creating build/lib/MEDS_transforms/dataframe 2026-04-08T03:20:06,927 copying src/MEDS_transforms/dataframe/types.py -> build/lib/MEDS_transforms/dataframe 2026-04-08T03:20:06,929 copying src/MEDS_transforms/dataframe/read_fn.py -> build/lib/MEDS_transforms/dataframe 2026-04-08T03:20:06,931 copying src/MEDS_transforms/dataframe/write_fn.py -> build/lib/MEDS_transforms/dataframe 2026-04-08T03:20:06,933 copying src/MEDS_transforms/dataframe/__init__.py -> build/lib/MEDS_transforms/dataframe 2026-04-08T03:20:06,936 creating build/lib/MEDS_transforms/compute_modes 2026-04-08T03:20:06,937 copying src/MEDS_transforms/compute_modes/match_revise.py -> build/lib/MEDS_transforms/compute_modes 2026-04-08T03:20:06,940 copying src/MEDS_transforms/compute_modes/__init__.py -> build/lib/MEDS_transforms/compute_modes 2026-04-08T03:20:06,941 copying src/MEDS_transforms/compute_modes/compute_fn.py -> build/lib/MEDS_transforms/compute_modes 2026-04-08T03:20:06,945 creating build/lib/MEDS_transforms/stages 2026-04-08T03:20:06,946 copying src/MEDS_transforms/stages/discovery.py -> build/lib/MEDS_transforms/stages 2026-04-08T03:20:06,948 copying src/MEDS_transforms/stages/examples.py -> build/lib/MEDS_transforms/stages 2026-04-08T03:20:06,951 copying src/MEDS_transforms/stages/__init__.py -> build/lib/MEDS_transforms/stages 2026-04-08T03:20:06,953 copying src/MEDS_transforms/stages/base.py -> build/lib/MEDS_transforms/stages 2026-04-08T03:20:06,956 copying src/MEDS_transforms/stages/docgen.py -> build/lib/MEDS_transforms/stages 2026-04-08T03:20:06,959 creating build/lib/MEDS_transforms/stages/filter_subjects 2026-04-08T03:20:06,960 copying src/MEDS_transforms/stages/filter_subjects/__init__.py -> build/lib/MEDS_transforms/stages/filter_subjects 2026-04-08T03:20:06,962 copying src/MEDS_transforms/stages/filter_subjects/filter_subjects.py -> build/lib/MEDS_transforms/stages/filter_subjects 2026-04-08T03:20:06,965 creating build/lib/MEDS_transforms/stages/occlude_outliers 2026-04-08T03:20:06,966 copying src/MEDS_transforms/stages/occlude_outliers/__init__.py -> build/lib/MEDS_transforms/stages/occlude_outliers 2026-04-08T03:20:06,968 copying src/MEDS_transforms/stages/occlude_outliers/occlude_outliers.py -> build/lib/MEDS_transforms/stages/occlude_outliers 2026-04-08T03:20:06,971 creating build/lib/MEDS_transforms/stages/aggregate_code_metadata 2026-04-08T03:20:06,973 copying src/MEDS_transforms/stages/aggregate_code_metadata/__init__.py -> build/lib/MEDS_transforms/stages/aggregate_code_metadata 2026-04-08T03:20:06,974 copying src/MEDS_transforms/stages/aggregate_code_metadata/aggregate_code_metadata.py -> build/lib/MEDS_transforms/stages/aggregate_code_metadata 2026-04-08T03:20:06,978 creating build/lib/MEDS_transforms/stages/reorder_measurements 2026-04-08T03:20:06,979 copying src/MEDS_transforms/stages/reorder_measurements/__init__.py -> build/lib/MEDS_transforms/stages/reorder_measurements 2026-04-08T03:20:06,980 copying src/MEDS_transforms/stages/reorder_measurements/reorder_measurements.py -> build/lib/MEDS_transforms/stages/reorder_measurements 2026-04-08T03:20:06,983 creating build/lib/MEDS_transforms/stages/extract_values 2026-04-08T03:20:06,984 copying src/MEDS_transforms/stages/extract_values/__init__.py -> build/lib/MEDS_transforms/stages/extract_values 2026-04-08T03:20:06,986 copying src/MEDS_transforms/stages/extract_values/extract_values.py -> build/lib/MEDS_transforms/stages/extract_values 2026-04-08T03:20:06,988 creating build/lib/MEDS_transforms/stages/bin_numeric_values 2026-04-08T03:20:06,989 copying src/MEDS_transforms/stages/bin_numeric_values/bin_numeric_values.py -> build/lib/MEDS_transforms/stages/bin_numeric_values 2026-04-08T03:20:06,992 copying src/MEDS_transforms/stages/bin_numeric_values/__init__.py -> build/lib/MEDS_transforms/stages/bin_numeric_values 2026-04-08T03:20:06,995 creating build/lib/MEDS_transforms/stages/normalization 2026-04-08T03:20:06,996 copying src/MEDS_transforms/stages/normalization/normalization.py -> build/lib/MEDS_transforms/stages/normalization 2026-04-08T03:20:06,998 copying src/MEDS_transforms/stages/normalization/__init__.py -> build/lib/MEDS_transforms/stages/normalization 2026-04-08T03:20:07,001 creating build/lib/MEDS_transforms/stages/reshard_to_split 2026-04-08T03:20:07,002 copying src/MEDS_transforms/stages/reshard_to_split/__init__.py -> build/lib/MEDS_transforms/stages/reshard_to_split 2026-04-08T03:20:07,003 copying src/MEDS_transforms/stages/reshard_to_split/reshard_to_split.py -> build/lib/MEDS_transforms/stages/reshard_to_split 2026-04-08T03:20:07,007 creating build/lib/MEDS_transforms/stages/filter_measurements 2026-04-08T03:20:07,008 copying src/MEDS_transforms/stages/filter_measurements/__init__.py -> build/lib/MEDS_transforms/stages/filter_measurements 2026-04-08T03:20:07,010 copying src/MEDS_transforms/stages/filter_measurements/filter_measurements.py -> build/lib/MEDS_transforms/stages/filter_measurements 2026-04-08T03:20:07,012 creating build/lib/MEDS_transforms/stages/fit_vocabulary_indices 2026-04-08T03:20:07,013 copying src/MEDS_transforms/stages/fit_vocabulary_indices/__init__.py -> build/lib/MEDS_transforms/stages/fit_vocabulary_indices 2026-04-08T03:20:07,015 copying src/MEDS_transforms/stages/fit_vocabulary_indices/fit_vocabulary_indices.py -> build/lib/MEDS_transforms/stages/fit_vocabulary_indices 2026-04-08T03:20:07,019 creating build/lib/MEDS_transforms/stages/add_time_derived_measurements 2026-04-08T03:20:07,020 copying src/MEDS_transforms/stages/add_time_derived_measurements/add_time_derived_measurements.py -> build/lib/MEDS_transforms/stages/add_time_derived_measurements 2026-04-08T03:20:07,022 copying src/MEDS_transforms/stages/add_time_derived_measurements/timeline_tokens.py -> build/lib/MEDS_transforms/stages/add_time_derived_measurements 2026-04-08T03:20:07,024 copying src/MEDS_transforms/stages/add_time_derived_measurements/__init__.py -> build/lib/MEDS_transforms/stages/add_time_derived_measurements 2026-04-08T03:20:07,027 copying src/MEDS_transforms/stages/add_time_derived_measurements/time_of_day.py -> build/lib/MEDS_transforms/stages/add_time_derived_measurements 2026-04-08T03:20:07,029 copying src/MEDS_transforms/stages/add_time_derived_measurements/age.py -> build/lib/MEDS_transforms/stages/add_time_derived_measurements 2026-04-08T03:20:07,031 copying src/MEDS_transforms/stages/add_time_derived_measurements/utils.py -> build/lib/MEDS_transforms/stages/add_time_derived_measurements 2026-04-08T03:20:07,034 creating build/lib/MEDS_transforms/stages/filter_subjects/examples 2026-04-08T03:20:07,035 copying src/MEDS_transforms/stages/filter_subjects/examples/__init__.py -> build/lib/MEDS_transforms/stages/filter_subjects/examples 2026-04-08T03:20:07,037 creating build/lib/MEDS_transforms/stages/occlude_outliers/examples 2026-04-08T03:20:07,038 copying src/MEDS_transforms/stages/occlude_outliers/examples/__init__.py -> build/lib/MEDS_transforms/stages/occlude_outliers/examples 2026-04-08T03:20:07,040 creating build/lib/MEDS_transforms/stages/occlude_outliers/examples/in_example_pipeline 2026-04-08T03:20:07,041 copying src/MEDS_transforms/stages/occlude_outliers/examples/in_example_pipeline/__init__.py -> build/lib/MEDS_transforms/stages/occlude_outliers/examples/in_example_pipeline 2026-04-08T03:20:07,043 creating build/lib/MEDS_transforms/stages/occlude_outliers/examples/on_raw_static_data 2026-04-08T03:20:07,044 copying src/MEDS_transforms/stages/occlude_outliers/examples/on_raw_static_data/__init__.py -> build/lib/MEDS_transforms/stages/occlude_outliers/examples/on_raw_static_data 2026-04-08T03:20:07,046 creating build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples 2026-04-08T03:20:07,047 copying src/MEDS_transforms/stages/aggregate_code_metadata/examples/__init__.py -> build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples 2026-04-08T03:20:07,049 creating build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline 2026-04-08T03:20:07,050 copying src/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/__init__.py -> build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline 2026-04-08T03:20:07,053 creating build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/on_raw_static_data 2026-04-08T03:20:07,054 copying src/MEDS_transforms/stages/aggregate_code_metadata/examples/on_raw_static_data/__init__.py -> build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/on_raw_static_data 2026-04-08T03:20:07,056 creating build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/with_not_split_defined_shards 2026-04-08T03:20:07,057 copying src/MEDS_transforms/stages/aggregate_code_metadata/examples/with_not_split_defined_shards/__init__.py -> build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/with_not_split_defined_shards 2026-04-08T03:20:07,059 creating build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_normalization 2026-04-08T03:20:07,060 copying src/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_normalization/__init__.py -> build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_normalization 2026-04-08T03:20:07,062 creating build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_outlier_detection 2026-04-08T03:20:07,064 copying src/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_outlier_detection/__init__.py -> build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_outlier_detection 2026-04-08T03:20:07,066 creating build/lib/MEDS_transforms/stages/reorder_measurements/examples 2026-04-08T03:20:07,067 copying src/MEDS_transforms/stages/reorder_measurements/examples/__init__.py -> build/lib/MEDS_transforms/stages/reorder_measurements/examples 2026-04-08T03:20:07,069 creating build/lib/MEDS_transforms/stages/extract_values/examples 2026-04-08T03:20:07,070 copying src/MEDS_transforms/stages/extract_values/examples/__init__.py -> build/lib/MEDS_transforms/stages/extract_values/examples 2026-04-08T03:20:07,072 creating build/lib/MEDS_transforms/stages/bin_numeric_values/examples 2026-04-08T03:20:07,073 copying src/MEDS_transforms/stages/bin_numeric_values/examples/__init__.py -> build/lib/MEDS_transforms/stages/bin_numeric_values/examples 2026-04-08T03:20:07,075 creating build/lib/MEDS_transforms/stages/bin_numeric_values/examples/custom_bins_fp 2026-04-08T03:20:07,076 copying src/MEDS_transforms/stages/bin_numeric_values/examples/custom_bins_fp/__init__.py -> build/lib/MEDS_transforms/stages/bin_numeric_values/examples/custom_bins_fp 2026-04-08T03:20:07,078 creating build/lib/MEDS_transforms/stages/normalization/examples 2026-04-08T03:20:07,079 copying src/MEDS_transforms/stages/normalization/examples/__init__.py -> build/lib/MEDS_transforms/stages/normalization/examples 2026-04-08T03:20:07,081 creating build/lib/MEDS_transforms/stages/normalization/examples/in_example_pipeline 2026-04-08T03:20:07,082 copying src/MEDS_transforms/stages/normalization/examples/in_example_pipeline/__init__.py -> build/lib/MEDS_transforms/stages/normalization/examples/in_example_pipeline 2026-04-08T03:20:07,084 creating build/lib/MEDS_transforms/stages/normalization/examples/on_raw_static_data 2026-04-08T03:20:07,085 copying src/MEDS_transforms/stages/normalization/examples/on_raw_static_data/__init__.py -> build/lib/MEDS_transforms/stages/normalization/examples/on_raw_static_data 2026-04-08T03:20:07,087 creating build/lib/MEDS_transforms/stages/reshard_to_split/examples 2026-04-08T03:20:07,087 copying src/MEDS_transforms/stages/reshard_to_split/examples/__init__.py -> build/lib/MEDS_transforms/stages/reshard_to_split/examples 2026-04-08T03:20:07,090 creating build/lib/MEDS_transforms/stages/filter_measurements/examples 2026-04-08T03:20:07,091 copying src/MEDS_transforms/stages/filter_measurements/examples/__init__.py -> build/lib/MEDS_transforms/stages/filter_measurements/examples 2026-04-08T03:20:07,093 creating build/lib/MEDS_transforms/stages/filter_measurements/examples/simple 2026-04-08T03:20:07,094 copying src/MEDS_transforms/stages/filter_measurements/examples/simple/__init__.py -> build/lib/MEDS_transforms/stages/filter_measurements/examples/simple 2026-04-08T03:20:07,096 creating build/lib/MEDS_transforms/stages/filter_measurements/examples/match_revise 2026-04-08T03:20:07,097 copying src/MEDS_transforms/stages/filter_measurements/examples/match_revise/__init__.py -> build/lib/MEDS_transforms/stages/filter_measurements/examples/match_revise 2026-04-08T03:20:07,099 creating build/lib/MEDS_transforms/stages/fit_vocabulary_indices/examples 2026-04-08T03:20:07,100 copying src/MEDS_transforms/stages/fit_vocabulary_indices/examples/__init__.py -> build/lib/MEDS_transforms/stages/fit_vocabulary_indices/examples 2026-04-08T03:20:07,103 creating build/lib/MEDS_transforms/stages/fit_vocabulary_indices/examples/in_example_pipeline 2026-04-08T03:20:07,104 copying src/MEDS_transforms/stages/fit_vocabulary_indices/examples/in_example_pipeline/__init__.py -> build/lib/MEDS_transforms/stages/fit_vocabulary_indices/examples/in_example_pipeline 2026-04-08T03:20:07,106 creating build/lib/MEDS_transforms/stages/fit_vocabulary_indices/examples/on_raw_static_data 2026-04-08T03:20:07,107 copying src/MEDS_transforms/stages/fit_vocabulary_indices/examples/on_raw_static_data/__init__.py -> build/lib/MEDS_transforms/stages/fit_vocabulary_indices/examples/on_raw_static_data 2026-04-08T03:20:07,109 creating build/lib/MEDS_transforms/stages/add_time_derived_measurements/examples 2026-04-08T03:20:07,111 copying src/MEDS_transforms/stages/add_time_derived_measurements/examples/__init__.py -> build/lib/MEDS_transforms/stages/add_time_derived_measurements/examples 2026-04-08T03:20:07,113 creating build/lib/MEDS_transforms/stages/add_time_derived_measurements/examples/in_example_pipeline 2026-04-08T03:20:07,113 copying src/MEDS_transforms/stages/add_time_derived_measurements/examples/in_example_pipeline/__init__.py -> build/lib/MEDS_transforms/stages/add_time_derived_measurements/examples/in_example_pipeline 2026-04-08T03:20:07,115 creating build/lib/MEDS_transforms/stages/add_time_derived_measurements/examples/on_raw_static_data 2026-04-08T03:20:07,116 copying src/MEDS_transforms/stages/add_time_derived_measurements/examples/on_raw_static_data/__init__.py -> build/lib/MEDS_transforms/stages/add_time_derived_measurements/examples/on_raw_static_data 2026-04-08T03:20:07,119 running egg_info 2026-04-08T03:20:07,132 writing src/MEDS_transforms.egg-info/PKG-INFO 2026-04-08T03:20:07,138 writing dependency_links to src/MEDS_transforms.egg-info/dependency_links.txt 2026-04-08T03:20:07,140 writing entry points to src/MEDS_transforms.egg-info/entry_points.txt 2026-04-08T03:20:07,143 writing requirements to src/MEDS_transforms.egg-info/requires.txt 2026-04-08T03:20:07,144 writing top-level names to src/MEDS_transforms.egg-info/top_level.txt 2026-04-08T03:20:07,204 /tmp/pip-build-env-qrxym6pw/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-04-08T03:20:07,204 return get_active_overrides().subprocess_timeout 2026-04-08T03:20:07,210 listing git files failed - pretending there aren't any 2026-04-08T03:20:07,215 reading manifest file 'src/MEDS_transforms.egg-info/SOURCES.txt' 2026-04-08T03:20:07,228 adding license file 'LICENSE' 2026-04-08T03:20:07,239 writing manifest file 'src/MEDS_transforms.egg-info/SOURCES.txt' 2026-04-08T03:20:07,268 copying src/MEDS_transforms/configs/_main.yaml -> build/lib/MEDS_transforms/configs 2026-04-08T03:20:07,271 copying src/MEDS_transforms/configs/_runner.yaml -> build/lib/MEDS_transforms/configs 2026-04-08T03:20:07,273 copying src/MEDS_transforms/stages/README.md -> build/lib/MEDS_transforms/stages 2026-04-08T03:20:07,275 copying src/MEDS_transforms/stages/filter_subjects/config.yaml -> build/lib/MEDS_transforms/stages/filter_subjects 2026-04-08T03:20:07,277 copying src/MEDS_transforms/stages/occlude_outliers/README.md -> build/lib/MEDS_transforms/stages/occlude_outliers 2026-04-08T03:20:07,279 copying src/MEDS_transforms/stages/occlude_outliers/config.yaml -> build/lib/MEDS_transforms/stages/occlude_outliers 2026-04-08T03:20:07,281 copying src/MEDS_transforms/stages/reorder_measurements/config.yaml -> build/lib/MEDS_transforms/stages/reorder_measurements 2026-04-08T03:20:07,283 copying src/MEDS_transforms/stages/bin_numeric_values/config.yaml -> build/lib/MEDS_transforms/stages/bin_numeric_values 2026-04-08T03:20:07,286 copying src/MEDS_transforms/stages/normalization/README.md -> build/lib/MEDS_transforms/stages/normalization 2026-04-08T03:20:07,288 copying src/MEDS_transforms/stages/reshard_to_split/config.yaml -> build/lib/MEDS_transforms/stages/reshard_to_split 2026-04-08T03:20:07,290 copying src/MEDS_transforms/stages/filter_measurements/config.yaml -> build/lib/MEDS_transforms/stages/filter_measurements 2026-04-08T03:20:07,292 copying src/MEDS_transforms/stages/fit_vocabulary_indices/config.yaml -> build/lib/MEDS_transforms/stages/fit_vocabulary_indices 2026-04-08T03:20:07,294 copying src/MEDS_transforms/stages/add_time_derived_measurements/README.md -> build/lib/MEDS_transforms/stages/add_time_derived_measurements 2026-04-08T03:20:07,297 copying src/MEDS_transforms/stages/add_time_derived_measurements/config.yaml -> build/lib/MEDS_transforms/stages/add_time_derived_measurements 2026-04-08T03:20:07,299 copying src/MEDS_transforms/stages/filter_subjects/examples/cfg.yaml -> build/lib/MEDS_transforms/stages/filter_subjects/examples 2026-04-08T03:20:07,301 copying src/MEDS_transforms/stages/filter_subjects/examples/out_data.yaml -> build/lib/MEDS_transforms/stages/filter_subjects/examples 2026-04-08T03:20:07,303 copying src/MEDS_transforms/stages/occlude_outliers/examples/in_example_pipeline/cfg.yaml -> build/lib/MEDS_transforms/stages/occlude_outliers/examples/in_example_pipeline 2026-04-08T03:20:07,305 copying src/MEDS_transforms/stages/occlude_outliers/examples/in_example_pipeline/in.yaml -> build/lib/MEDS_transforms/stages/occlude_outliers/examples/in_example_pipeline 2026-04-08T03:20:07,307 copying src/MEDS_transforms/stages/occlude_outliers/examples/in_example_pipeline/out_data.yaml -> build/lib/MEDS_transforms/stages/occlude_outliers/examples/in_example_pipeline 2026-04-08T03:20:07,310 copying src/MEDS_transforms/stages/occlude_outliers/examples/on_raw_static_data/cfg.yaml -> build/lib/MEDS_transforms/stages/occlude_outliers/examples/on_raw_static_data 2026-04-08T03:20:07,311 copying src/MEDS_transforms/stages/occlude_outliers/examples/on_raw_static_data/in.yaml -> build/lib/MEDS_transforms/stages/occlude_outliers/examples/on_raw_static_data 2026-04-08T03:20:07,314 copying src/MEDS_transforms/stages/occlude_outliers/examples/on_raw_static_data/out_data.yaml -> build/lib/MEDS_transforms/stages/occlude_outliers/examples/on_raw_static_data 2026-04-08T03:20:07,316 copying src/MEDS_transforms/stages/aggregate_code_metadata/examples/on_raw_static_data/_test_cfg.yaml -> build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/on_raw_static_data 2026-04-08T03:20:07,318 copying src/MEDS_transforms/stages/aggregate_code_metadata/examples/on_raw_static_data/cfg.yaml -> build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/on_raw_static_data 2026-04-08T03:20:07,320 copying src/MEDS_transforms/stages/aggregate_code_metadata/examples/on_raw_static_data/out_metadata.yaml -> build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/on_raw_static_data 2026-04-08T03:20:07,322 copying src/MEDS_transforms/stages/aggregate_code_metadata/examples/with_not_split_defined_shards/_test_cfg.yaml -> build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/with_not_split_defined_shards 2026-04-08T03:20:07,325 copying src/MEDS_transforms/stages/aggregate_code_metadata/examples/with_not_split_defined_shards/cfg.yaml -> build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/with_not_split_defined_shards 2026-04-08T03:20:07,327 copying src/MEDS_transforms/stages/aggregate_code_metadata/examples/with_not_split_defined_shards/in.yaml -> build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/with_not_split_defined_shards 2026-04-08T03:20:07,329 copying src/MEDS_transforms/stages/aggregate_code_metadata/examples/with_not_split_defined_shards/out_metadata.yaml -> build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/with_not_split_defined_shards 2026-04-08T03:20:07,332 copying src/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_normalization/_test_cfg.yaml -> build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_normalization 2026-04-08T03:20:07,334 copying src/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_normalization/cfg.yaml -> build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_normalization 2026-04-08T03:20:07,336 copying src/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_normalization/in.yaml -> build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_normalization 2026-04-08T03:20:07,339 copying src/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_normalization/out_metadata.yaml -> build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_normalization 2026-04-08T03:20:07,341 copying src/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_outlier_detection/_test_cfg.yaml -> build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_outlier_detection 2026-04-08T03:20:07,344 copying src/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_outlier_detection/cfg.yaml -> build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_outlier_detection 2026-04-08T03:20:07,346 copying src/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_outlier_detection/in.yaml -> build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_outlier_detection 2026-04-08T03:20:07,348 copying src/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_outlier_detection/out_metadata.yaml -> build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_outlier_detection 2026-04-08T03:20:07,350 copying src/MEDS_transforms/stages/reorder_measurements/examples/cfg.yaml -> build/lib/MEDS_transforms/stages/reorder_measurements/examples 2026-04-08T03:20:07,352 copying src/MEDS_transforms/stages/reorder_measurements/examples/in.yaml -> build/lib/MEDS_transforms/stages/reorder_measurements/examples 2026-04-08T03:20:07,354 copying src/MEDS_transforms/stages/reorder_measurements/examples/out_data.yaml -> build/lib/MEDS_transforms/stages/reorder_measurements/examples 2026-04-08T03:20:07,356 copying src/MEDS_transforms/stages/extract_values/examples/_test_cfg.yaml -> build/lib/MEDS_transforms/stages/extract_values/examples 2026-04-08T03:20:07,358 copying src/MEDS_transforms/stages/extract_values/examples/cfg.yaml -> build/lib/MEDS_transforms/stages/extract_values/examples 2026-04-08T03:20:07,361 copying src/MEDS_transforms/stages/extract_values/examples/in.yaml -> build/lib/MEDS_transforms/stages/extract_values/examples 2026-04-08T03:20:07,363 copying src/MEDS_transforms/stages/extract_values/examples/out_data.yaml -> build/lib/MEDS_transforms/stages/extract_values/examples 2026-04-08T03:20:07,365 copying src/MEDS_transforms/stages/bin_numeric_values/examples/cfg.yaml -> build/lib/MEDS_transforms/stages/bin_numeric_values/examples 2026-04-08T03:20:07,367 copying src/MEDS_transforms/stages/bin_numeric_values/examples/in.yaml -> build/lib/MEDS_transforms/stages/bin_numeric_values/examples 2026-04-08T03:20:07,370 copying src/MEDS_transforms/stages/bin_numeric_values/examples/out_data.yaml -> build/lib/MEDS_transforms/stages/bin_numeric_values/examples 2026-04-08T03:20:07,372 copying src/MEDS_transforms/stages/bin_numeric_values/examples/custom_bins_fp/cfg.yaml -> build/lib/MEDS_transforms/stages/bin_numeric_values/examples/custom_bins_fp 2026-04-08T03:20:07,374 copying src/MEDS_transforms/stages/bin_numeric_values/examples/custom_bins_fp/custom_bins.yaml -> build/lib/MEDS_transforms/stages/bin_numeric_values/examples/custom_bins_fp 2026-04-08T03:20:07,376 copying src/MEDS_transforms/stages/bin_numeric_values/examples/custom_bins_fp/in.yaml -> build/lib/MEDS_transforms/stages/bin_numeric_values/examples/custom_bins_fp 2026-04-08T03:20:07,380 copying src/MEDS_transforms/stages/bin_numeric_values/examples/custom_bins_fp/out_data.yaml -> build/lib/MEDS_transforms/stages/bin_numeric_values/examples/custom_bins_fp 2026-04-08T03:20:07,382 copying src/MEDS_transforms/stages/normalization/examples/in_example_pipeline/in.yaml -> build/lib/MEDS_transforms/stages/normalization/examples/in_example_pipeline 2026-04-08T03:20:07,384 copying src/MEDS_transforms/stages/normalization/examples/in_example_pipeline/out_data.yaml -> build/lib/MEDS_transforms/stages/normalization/examples/in_example_pipeline 2026-04-08T03:20:07,387 copying src/MEDS_transforms/stages/normalization/examples/on_raw_static_data/in.yaml -> build/lib/MEDS_transforms/stages/normalization/examples/on_raw_static_data 2026-04-08T03:20:07,389 copying src/MEDS_transforms/stages/normalization/examples/on_raw_static_data/out_data.yaml -> build/lib/MEDS_transforms/stages/normalization/examples/on_raw_static_data 2026-04-08T03:20:07,392 copying src/MEDS_transforms/stages/reshard_to_split/examples/cfg.yaml -> build/lib/MEDS_transforms/stages/reshard_to_split/examples 2026-04-08T03:20:07,394 copying src/MEDS_transforms/stages/reshard_to_split/examples/in.yaml -> build/lib/MEDS_transforms/stages/reshard_to_split/examples 2026-04-08T03:20:07,396 copying src/MEDS_transforms/stages/reshard_to_split/examples/out_data.yaml -> build/lib/MEDS_transforms/stages/reshard_to_split/examples 2026-04-08T03:20:07,398 copying src/MEDS_transforms/stages/filter_measurements/examples/README.md -> build/lib/MEDS_transforms/stages/filter_measurements/examples 2026-04-08T03:20:07,400 copying src/MEDS_transforms/stages/filter_measurements/examples/simple/cfg.yaml -> build/lib/MEDS_transforms/stages/filter_measurements/examples/simple 2026-04-08T03:20:07,402 copying src/MEDS_transforms/stages/filter_measurements/examples/simple/in.yaml -> build/lib/MEDS_transforms/stages/filter_measurements/examples/simple 2026-04-08T03:20:07,404 copying src/MEDS_transforms/stages/filter_measurements/examples/simple/out_data.yaml -> build/lib/MEDS_transforms/stages/filter_measurements/examples/simple 2026-04-08T03:20:07,407 copying src/MEDS_transforms/stages/filter_measurements/examples/match_revise/_test_cfg.yaml -> build/lib/MEDS_transforms/stages/filter_measurements/examples/match_revise 2026-04-08T03:20:07,409 copying src/MEDS_transforms/stages/filter_measurements/examples/match_revise/cfg.yaml -> build/lib/MEDS_transforms/stages/filter_measurements/examples/match_revise 2026-04-08T03:20:07,411 copying src/MEDS_transforms/stages/filter_measurements/examples/match_revise/in.yaml -> build/lib/MEDS_transforms/stages/filter_measurements/examples/match_revise 2026-04-08T03:20:07,413 copying src/MEDS_transforms/stages/filter_measurements/examples/match_revise/out_data.yaml -> build/lib/MEDS_transforms/stages/filter_measurements/examples/match_revise 2026-04-08T03:20:07,415 copying src/MEDS_transforms/stages/fit_vocabulary_indices/examples/in_example_pipeline/in.yaml -> build/lib/MEDS_transforms/stages/fit_vocabulary_indices/examples/in_example_pipeline 2026-04-08T03:20:07,418 copying src/MEDS_transforms/stages/fit_vocabulary_indices/examples/in_example_pipeline/out_metadata.yaml -> build/lib/MEDS_transforms/stages/fit_vocabulary_indices/examples/in_example_pipeline 2026-04-08T03:20:07,421 copying src/MEDS_transforms/stages/fit_vocabulary_indices/examples/on_raw_static_data/out_metadata.yaml -> build/lib/MEDS_transforms/stages/fit_vocabulary_indices/examples/on_raw_static_data 2026-04-08T03:20:07,423 copying src/MEDS_transforms/stages/add_time_derived_measurements/examples/in_example_pipeline/cfg.yaml -> build/lib/MEDS_transforms/stages/add_time_derived_measurements/examples/in_example_pipeline 2026-04-08T03:20:07,425 copying src/MEDS_transforms/stages/add_time_derived_measurements/examples/in_example_pipeline/in.yaml -> build/lib/MEDS_transforms/stages/add_time_derived_measurements/examples/in_example_pipeline 2026-04-08T03:20:07,427 copying src/MEDS_transforms/stages/add_time_derived_measurements/examples/in_example_pipeline/out_data.yaml -> build/lib/MEDS_transforms/stages/add_time_derived_measurements/examples/in_example_pipeline 2026-04-08T03:20:07,430 copying src/MEDS_transforms/stages/add_time_derived_measurements/examples/on_raw_static_data/_test_cfg.yaml -> build/lib/MEDS_transforms/stages/add_time_derived_measurements/examples/on_raw_static_data 2026-04-08T03:20:07,432 copying src/MEDS_transforms/stages/add_time_derived_measurements/examples/on_raw_static_data/cfg.yaml -> build/lib/MEDS_transforms/stages/add_time_derived_measurements/examples/on_raw_static_data 2026-04-08T03:20:07,434 copying src/MEDS_transforms/stages/add_time_derived_measurements/examples/on_raw_static_data/out_data.yaml -> build/lib/MEDS_transforms/stages/add_time_derived_measurements/examples/on_raw_static_data 2026-04-08T03:20:07,465 installing to build/bdist.linux-armv7l/wheel 2026-04-08T03:20:07,466 running install 2026-04-08T03:20:07,489 running install_lib 2026-04-08T03:20:07,497 creating build/bdist.linux-armv7l/wheel 2026-04-08T03:20:07,499 creating build/bdist.linux-armv7l/wheel/MEDS_transforms 2026-04-08T03:20:07,500 copying build/lib/MEDS_transforms/__main__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms 2026-04-08T03:20:07,503 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/configs 2026-04-08T03:20:07,504 copying build/lib/MEDS_transforms/configs/_runner.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/configs 2026-04-08T03:20:07,506 copying build/lib/MEDS_transforms/configs/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/configs 2026-04-08T03:20:07,507 copying build/lib/MEDS_transforms/configs/dataset.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/configs 2026-04-08T03:20:07,510 copying build/lib/MEDS_transforms/configs/pipeline.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/configs 2026-04-08T03:20:07,512 copying build/lib/MEDS_transforms/configs/_main.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/configs 2026-04-08T03:20:07,514 copying build/lib/MEDS_transforms/configs/utils.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/configs 2026-04-08T03:20:07,516 copying build/lib/MEDS_transforms/configs/stage.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/configs 2026-04-08T03:20:07,518 copying build/lib/MEDS_transforms/parser.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms 2026-04-08T03:20:07,523 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/mapreduce 2026-04-08T03:20:07,524 copying build/lib/MEDS_transforms/mapreduce/rwlock.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/mapreduce 2026-04-08T03:20:07,526 copying build/lib/MEDS_transforms/mapreduce/shard_iteration.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/mapreduce 2026-04-08T03:20:07,529 copying build/lib/MEDS_transforms/mapreduce/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/mapreduce 2026-04-08T03:20:07,531 copying build/lib/MEDS_transforms/mapreduce/mapper.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/mapreduce 2026-04-08T03:20:07,533 copying build/lib/MEDS_transforms/mapreduce/reducer.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/mapreduce 2026-04-08T03:20:07,535 copying build/lib/MEDS_transforms/mapreduce/stage.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/mapreduce 2026-04-08T03:20:07,539 copying build/lib/MEDS_transforms/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms 2026-04-08T03:20:07,541 copying build/lib/MEDS_transforms/pytest_plugin.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms 2026-04-08T03:20:07,544 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/dataframe 2026-04-08T03:20:07,545 copying build/lib/MEDS_transforms/dataframe/types.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/dataframe 2026-04-08T03:20:07,546 copying build/lib/MEDS_transforms/dataframe/read_fn.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/dataframe 2026-04-08T03:20:07,548 copying build/lib/MEDS_transforms/dataframe/write_fn.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/dataframe 2026-04-08T03:20:07,551 copying build/lib/MEDS_transforms/dataframe/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/dataframe 2026-04-08T03:20:07,553 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/compute_modes 2026-04-08T03:20:07,554 copying build/lib/MEDS_transforms/compute_modes/match_revise.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/compute_modes 2026-04-08T03:20:07,557 copying build/lib/MEDS_transforms/compute_modes/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/compute_modes 2026-04-08T03:20:07,559 copying build/lib/MEDS_transforms/compute_modes/compute_fn.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/compute_modes 2026-04-08T03:20:07,562 copying build/lib/MEDS_transforms/runner.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms 2026-04-08T03:20:07,564 copying build/lib/MEDS_transforms/utils.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms 2026-04-08T03:20:07,566 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages 2026-04-08T03:20:07,568 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/filter_subjects 2026-04-08T03:20:07,570 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/filter_subjects/examples 2026-04-08T03:20:07,571 copying build/lib/MEDS_transforms/stages/filter_subjects/examples/out_data.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/filter_subjects/examples 2026-04-08T03:20:07,573 copying build/lib/MEDS_transforms/stages/filter_subjects/examples/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/filter_subjects/examples 2026-04-08T03:20:07,575 copying build/lib/MEDS_transforms/stages/filter_subjects/examples/cfg.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/filter_subjects/examples 2026-04-08T03:20:07,577 copying build/lib/MEDS_transforms/stages/filter_subjects/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/filter_subjects 2026-04-08T03:20:07,579 copying build/lib/MEDS_transforms/stages/filter_subjects/config.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/filter_subjects 2026-04-08T03:20:07,580 copying build/lib/MEDS_transforms/stages/filter_subjects/filter_subjects.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/filter_subjects 2026-04-08T03:20:07,583 copying build/lib/MEDS_transforms/stages/discovery.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages 2026-04-08T03:20:07,585 copying build/lib/MEDS_transforms/stages/examples.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages 2026-04-08T03:20:07,588 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/occlude_outliers 2026-04-08T03:20:07,590 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/occlude_outliers/examples 2026-04-08T03:20:07,591 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/occlude_outliers/examples/in_example_pipeline 2026-04-08T03:20:07,592 copying build/lib/MEDS_transforms/stages/occlude_outliers/examples/in_example_pipeline/in.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/occlude_outliers/examples/in_example_pipeline 2026-04-08T03:20:07,595 copying build/lib/MEDS_transforms/stages/occlude_outliers/examples/in_example_pipeline/out_data.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/occlude_outliers/examples/in_example_pipeline 2026-04-08T03:20:07,597 copying build/lib/MEDS_transforms/stages/occlude_outliers/examples/in_example_pipeline/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/occlude_outliers/examples/in_example_pipeline 2026-04-08T03:20:07,598 copying build/lib/MEDS_transforms/stages/occlude_outliers/examples/in_example_pipeline/cfg.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/occlude_outliers/examples/in_example_pipeline 2026-04-08T03:20:07,600 copying build/lib/MEDS_transforms/stages/occlude_outliers/examples/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/occlude_outliers/examples 2026-04-08T03:20:07,602 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/occlude_outliers/examples/on_raw_static_data 2026-04-08T03:20:07,603 copying build/lib/MEDS_transforms/stages/occlude_outliers/examples/on_raw_static_data/in.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/occlude_outliers/examples/on_raw_static_data 2026-04-08T03:20:07,605 copying build/lib/MEDS_transforms/stages/occlude_outliers/examples/on_raw_static_data/out_data.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/occlude_outliers/examples/on_raw_static_data 2026-04-08T03:20:07,607 copying build/lib/MEDS_transforms/stages/occlude_outliers/examples/on_raw_static_data/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/occlude_outliers/examples/on_raw_static_data 2026-04-08T03:20:07,609 copying build/lib/MEDS_transforms/stages/occlude_outliers/examples/on_raw_static_data/cfg.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/occlude_outliers/examples/on_raw_static_data 2026-04-08T03:20:07,610 copying build/lib/MEDS_transforms/stages/occlude_outliers/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/occlude_outliers 2026-04-08T03:20:07,612 copying build/lib/MEDS_transforms/stages/occlude_outliers/config.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/occlude_outliers 2026-04-08T03:20:07,614 copying build/lib/MEDS_transforms/stages/occlude_outliers/README.md -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/occlude_outliers 2026-04-08T03:20:07,616 copying build/lib/MEDS_transforms/stages/occlude_outliers/occlude_outliers.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/occlude_outliers 2026-04-08T03:20:07,618 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/aggregate_code_metadata 2026-04-08T03:20:07,620 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/aggregate_code_metadata/examples 2026-04-08T03:20:07,621 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline 2026-04-08T03:20:07,622 copying build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline 2026-04-08T03:20:07,625 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_normalization 2026-04-08T03:20:07,626 copying build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_normalization/out_metadata.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_normalization 2026-04-08T03:20:07,627 copying build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_normalization/in.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_normalization 2026-04-08T03:20:07,630 copying build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_normalization/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_normalization 2026-04-08T03:20:07,631 copying build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_normalization/_test_cfg.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_normalization 2026-04-08T03:20:07,633 copying build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_normalization/cfg.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_normalization 2026-04-08T03:20:07,635 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_outlier_detection 2026-04-08T03:20:07,636 copying build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_outlier_detection/out_metadata.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_outlier_detection 2026-04-08T03:20:07,638 copying build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_outlier_detection/in.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_outlier_detection 2026-04-08T03:20:07,640 copying build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_outlier_detection/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_outlier_detection 2026-04-08T03:20:07,642 copying build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_outlier_detection/_test_cfg.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_outlier_detection 2026-04-08T03:20:07,644 copying build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_outlier_detection/cfg.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_outlier_detection 2026-04-08T03:20:07,646 copying build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/aggregate_code_metadata/examples 2026-04-08T03:20:07,648 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/aggregate_code_metadata/examples/on_raw_static_data 2026-04-08T03:20:07,649 copying build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/on_raw_static_data/out_metadata.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/aggregate_code_metadata/examples/on_raw_static_data 2026-04-08T03:20:07,651 copying build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/on_raw_static_data/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/aggregate_code_metadata/examples/on_raw_static_data 2026-04-08T03:20:07,653 copying build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/on_raw_static_data/_test_cfg.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/aggregate_code_metadata/examples/on_raw_static_data 2026-04-08T03:20:07,654 copying build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/on_raw_static_data/cfg.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/aggregate_code_metadata/examples/on_raw_static_data 2026-04-08T03:20:07,657 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/aggregate_code_metadata/examples/with_not_split_defined_shards 2026-04-08T03:20:07,658 copying build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/with_not_split_defined_shards/out_metadata.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/aggregate_code_metadata/examples/with_not_split_defined_shards 2026-04-08T03:20:07,661 copying build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/with_not_split_defined_shards/in.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/aggregate_code_metadata/examples/with_not_split_defined_shards 2026-04-08T03:20:07,663 copying build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/with_not_split_defined_shards/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/aggregate_code_metadata/examples/with_not_split_defined_shards 2026-04-08T03:20:07,664 copying build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/with_not_split_defined_shards/_test_cfg.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/aggregate_code_metadata/examples/with_not_split_defined_shards 2026-04-08T03:20:07,666 copying build/lib/MEDS_transforms/stages/aggregate_code_metadata/examples/with_not_split_defined_shards/cfg.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/aggregate_code_metadata/examples/with_not_split_defined_shards 2026-04-08T03:20:07,668 copying build/lib/MEDS_transforms/stages/aggregate_code_metadata/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/aggregate_code_metadata 2026-04-08T03:20:07,670 copying build/lib/MEDS_transforms/stages/aggregate_code_metadata/aggregate_code_metadata.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/aggregate_code_metadata 2026-04-08T03:20:07,673 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/reorder_measurements 2026-04-08T03:20:07,675 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/reorder_measurements/examples 2026-04-08T03:20:07,676 copying build/lib/MEDS_transforms/stages/reorder_measurements/examples/in.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/reorder_measurements/examples 2026-04-08T03:20:07,678 copying build/lib/MEDS_transforms/stages/reorder_measurements/examples/out_data.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/reorder_measurements/examples 2026-04-08T03:20:07,680 copying build/lib/MEDS_transforms/stages/reorder_measurements/examples/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/reorder_measurements/examples 2026-04-08T03:20:07,681 copying build/lib/MEDS_transforms/stages/reorder_measurements/examples/cfg.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/reorder_measurements/examples 2026-04-08T03:20:07,683 copying build/lib/MEDS_transforms/stages/reorder_measurements/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/reorder_measurements 2026-04-08T03:20:07,685 copying build/lib/MEDS_transforms/stages/reorder_measurements/config.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/reorder_measurements 2026-04-08T03:20:07,687 copying build/lib/MEDS_transforms/stages/reorder_measurements/reorder_measurements.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/reorder_measurements 2026-04-08T03:20:07,689 copying build/lib/MEDS_transforms/stages/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages 2026-04-08T03:20:07,691 copying build/lib/MEDS_transforms/stages/base.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages 2026-04-08T03:20:07,694 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/extract_values 2026-04-08T03:20:07,696 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/extract_values/examples 2026-04-08T03:20:07,697 copying build/lib/MEDS_transforms/stages/extract_values/examples/in.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/extract_values/examples 2026-04-08T03:20:07,699 copying build/lib/MEDS_transforms/stages/extract_values/examples/out_data.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/extract_values/examples 2026-04-08T03:20:07,701 copying build/lib/MEDS_transforms/stages/extract_values/examples/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/extract_values/examples 2026-04-08T03:20:07,702 copying build/lib/MEDS_transforms/stages/extract_values/examples/_test_cfg.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/extract_values/examples 2026-04-08T03:20:07,704 copying build/lib/MEDS_transforms/stages/extract_values/examples/cfg.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/extract_values/examples 2026-04-08T03:20:07,706 copying build/lib/MEDS_transforms/stages/extract_values/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/extract_values 2026-04-08T03:20:07,708 copying build/lib/MEDS_transforms/stages/extract_values/extract_values.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/extract_values 2026-04-08T03:20:07,711 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/bin_numeric_values 2026-04-08T03:20:07,712 copying build/lib/MEDS_transforms/stages/bin_numeric_values/bin_numeric_values.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/bin_numeric_values 2026-04-08T03:20:07,716 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/bin_numeric_values/examples 2026-04-08T03:20:07,717 copying build/lib/MEDS_transforms/stages/bin_numeric_values/examples/in.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/bin_numeric_values/examples 2026-04-08T03:20:07,720 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/bin_numeric_values/examples/custom_bins_fp 2026-04-08T03:20:07,721 copying build/lib/MEDS_transforms/stages/bin_numeric_values/examples/custom_bins_fp/in.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/bin_numeric_values/examples/custom_bins_fp 2026-04-08T03:20:07,723 copying build/lib/MEDS_transforms/stages/bin_numeric_values/examples/custom_bins_fp/out_data.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/bin_numeric_values/examples/custom_bins_fp 2026-04-08T03:20:07,726 copying build/lib/MEDS_transforms/stages/bin_numeric_values/examples/custom_bins_fp/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/bin_numeric_values/examples/custom_bins_fp 2026-04-08T03:20:07,727 copying build/lib/MEDS_transforms/stages/bin_numeric_values/examples/custom_bins_fp/cfg.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/bin_numeric_values/examples/custom_bins_fp 2026-04-08T03:20:07,729 copying build/lib/MEDS_transforms/stages/bin_numeric_values/examples/custom_bins_fp/custom_bins.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/bin_numeric_values/examples/custom_bins_fp 2026-04-08T03:20:07,730 copying build/lib/MEDS_transforms/stages/bin_numeric_values/examples/out_data.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/bin_numeric_values/examples 2026-04-08T03:20:07,732 copying build/lib/MEDS_transforms/stages/bin_numeric_values/examples/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/bin_numeric_values/examples 2026-04-08T03:20:07,734 copying build/lib/MEDS_transforms/stages/bin_numeric_values/examples/cfg.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/bin_numeric_values/examples 2026-04-08T03:20:07,735 copying build/lib/MEDS_transforms/stages/bin_numeric_values/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/bin_numeric_values 2026-04-08T03:20:07,737 copying build/lib/MEDS_transforms/stages/bin_numeric_values/config.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/bin_numeric_values 2026-04-08T03:20:07,739 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/normalization 2026-04-08T03:20:07,741 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/normalization/examples 2026-04-08T03:20:07,742 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/normalization/examples/in_example_pipeline 2026-04-08T03:20:07,744 copying build/lib/MEDS_transforms/stages/normalization/examples/in_example_pipeline/in.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/normalization/examples/in_example_pipeline 2026-04-08T03:20:07,746 copying build/lib/MEDS_transforms/stages/normalization/examples/in_example_pipeline/out_data.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/normalization/examples/in_example_pipeline 2026-04-08T03:20:07,748 copying build/lib/MEDS_transforms/stages/normalization/examples/in_example_pipeline/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/normalization/examples/in_example_pipeline 2026-04-08T03:20:07,750 copying build/lib/MEDS_transforms/stages/normalization/examples/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/normalization/examples 2026-04-08T03:20:07,752 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/normalization/examples/on_raw_static_data 2026-04-08T03:20:07,753 copying build/lib/MEDS_transforms/stages/normalization/examples/on_raw_static_data/in.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/normalization/examples/on_raw_static_data 2026-04-08T03:20:07,755 copying build/lib/MEDS_transforms/stages/normalization/examples/on_raw_static_data/out_data.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/normalization/examples/on_raw_static_data 2026-04-08T03:20:07,757 copying build/lib/MEDS_transforms/stages/normalization/examples/on_raw_static_data/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/normalization/examples/on_raw_static_data 2026-04-08T03:20:07,759 copying build/lib/MEDS_transforms/stages/normalization/normalization.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/normalization 2026-04-08T03:20:07,761 copying build/lib/MEDS_transforms/stages/normalization/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/normalization 2026-04-08T03:20:07,763 copying build/lib/MEDS_transforms/stages/normalization/README.md -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/normalization 2026-04-08T03:20:07,766 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/reshard_to_split 2026-04-08T03:20:07,767 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/reshard_to_split/examples 2026-04-08T03:20:07,768 copying build/lib/MEDS_transforms/stages/reshard_to_split/examples/in.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/reshard_to_split/examples 2026-04-08T03:20:07,770 copying build/lib/MEDS_transforms/stages/reshard_to_split/examples/out_data.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/reshard_to_split/examples 2026-04-08T03:20:07,772 copying build/lib/MEDS_transforms/stages/reshard_to_split/examples/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/reshard_to_split/examples 2026-04-08T03:20:07,773 copying build/lib/MEDS_transforms/stages/reshard_to_split/examples/cfg.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/reshard_to_split/examples 2026-04-08T03:20:07,775 copying build/lib/MEDS_transforms/stages/reshard_to_split/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/reshard_to_split 2026-04-08T03:20:07,777 copying build/lib/MEDS_transforms/stages/reshard_to_split/config.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/reshard_to_split 2026-04-08T03:20:07,779 copying build/lib/MEDS_transforms/stages/reshard_to_split/reshard_to_split.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/reshard_to_split 2026-04-08T03:20:07,781 copying build/lib/MEDS_transforms/stages/docgen.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages 2026-04-08T03:20:07,783 copying build/lib/MEDS_transforms/stages/README.md -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages 2026-04-08T03:20:07,786 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/filter_measurements 2026-04-08T03:20:07,787 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/filter_measurements/examples 2026-04-08T03:20:07,789 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/filter_measurements/examples/simple 2026-04-08T03:20:07,790 copying build/lib/MEDS_transforms/stages/filter_measurements/examples/simple/in.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/filter_measurements/examples/simple 2026-04-08T03:20:07,793 copying build/lib/MEDS_transforms/stages/filter_measurements/examples/simple/out_data.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/filter_measurements/examples/simple 2026-04-08T03:20:07,795 copying build/lib/MEDS_transforms/stages/filter_measurements/examples/simple/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/filter_measurements/examples/simple 2026-04-08T03:20:07,796 copying build/lib/MEDS_transforms/stages/filter_measurements/examples/simple/cfg.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/filter_measurements/examples/simple 2026-04-08T03:20:07,798 copying build/lib/MEDS_transforms/stages/filter_measurements/examples/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/filter_measurements/examples 2026-04-08T03:20:07,800 copying build/lib/MEDS_transforms/stages/filter_measurements/examples/README.md -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/filter_measurements/examples 2026-04-08T03:20:07,802 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/filter_measurements/examples/match_revise 2026-04-08T03:20:07,803 copying build/lib/MEDS_transforms/stages/filter_measurements/examples/match_revise/in.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/filter_measurements/examples/match_revise 2026-04-08T03:20:07,805 copying build/lib/MEDS_transforms/stages/filter_measurements/examples/match_revise/out_data.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/filter_measurements/examples/match_revise 2026-04-08T03:20:07,807 copying build/lib/MEDS_transforms/stages/filter_measurements/examples/match_revise/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/filter_measurements/examples/match_revise 2026-04-08T03:20:07,809 copying build/lib/MEDS_transforms/stages/filter_measurements/examples/match_revise/_test_cfg.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/filter_measurements/examples/match_revise 2026-04-08T03:20:07,811 copying build/lib/MEDS_transforms/stages/filter_measurements/examples/match_revise/cfg.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/filter_measurements/examples/match_revise 2026-04-08T03:20:07,813 copying build/lib/MEDS_transforms/stages/filter_measurements/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/filter_measurements 2026-04-08T03:20:07,814 copying build/lib/MEDS_transforms/stages/filter_measurements/config.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/filter_measurements 2026-04-08T03:20:07,816 copying build/lib/MEDS_transforms/stages/filter_measurements/filter_measurements.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/filter_measurements 2026-04-08T03:20:07,819 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/fit_vocabulary_indices 2026-04-08T03:20:07,821 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/fit_vocabulary_indices/examples 2026-04-08T03:20:07,822 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/fit_vocabulary_indices/examples/in_example_pipeline 2026-04-08T03:20:07,824 copying build/lib/MEDS_transforms/stages/fit_vocabulary_indices/examples/in_example_pipeline/out_metadata.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/fit_vocabulary_indices/examples/in_example_pipeline 2026-04-08T03:20:07,825 copying build/lib/MEDS_transforms/stages/fit_vocabulary_indices/examples/in_example_pipeline/in.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/fit_vocabulary_indices/examples/in_example_pipeline 2026-04-08T03:20:07,828 copying build/lib/MEDS_transforms/stages/fit_vocabulary_indices/examples/in_example_pipeline/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/fit_vocabulary_indices/examples/in_example_pipeline 2026-04-08T03:20:07,829 copying build/lib/MEDS_transforms/stages/fit_vocabulary_indices/examples/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/fit_vocabulary_indices/examples 2026-04-08T03:20:07,831 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/fit_vocabulary_indices/examples/on_raw_static_data 2026-04-08T03:20:07,832 copying build/lib/MEDS_transforms/stages/fit_vocabulary_indices/examples/on_raw_static_data/out_metadata.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/fit_vocabulary_indices/examples/on_raw_static_data 2026-04-08T03:20:07,834 copying build/lib/MEDS_transforms/stages/fit_vocabulary_indices/examples/on_raw_static_data/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/fit_vocabulary_indices/examples/on_raw_static_data 2026-04-08T03:20:07,836 copying build/lib/MEDS_transforms/stages/fit_vocabulary_indices/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/fit_vocabulary_indices 2026-04-08T03:20:07,838 copying build/lib/MEDS_transforms/stages/fit_vocabulary_indices/config.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/fit_vocabulary_indices 2026-04-08T03:20:07,840 copying build/lib/MEDS_transforms/stages/fit_vocabulary_indices/fit_vocabulary_indices.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/fit_vocabulary_indices 2026-04-08T03:20:07,843 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/add_time_derived_measurements 2026-04-08T03:20:07,844 copying build/lib/MEDS_transforms/stages/add_time_derived_measurements/add_time_derived_measurements.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/add_time_derived_measurements 2026-04-08T03:20:07,848 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/add_time_derived_measurements/examples 2026-04-08T03:20:07,849 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/add_time_derived_measurements/examples/in_example_pipeline 2026-04-08T03:20:07,850 copying build/lib/MEDS_transforms/stages/add_time_derived_measurements/examples/in_example_pipeline/in.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/add_time_derived_measurements/examples/in_example_pipeline 2026-04-08T03:20:07,852 copying build/lib/MEDS_transforms/stages/add_time_derived_measurements/examples/in_example_pipeline/out_data.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/add_time_derived_measurements/examples/in_example_pipeline 2026-04-08T03:20:07,854 copying build/lib/MEDS_transforms/stages/add_time_derived_measurements/examples/in_example_pipeline/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/add_time_derived_measurements/examples/in_example_pipeline 2026-04-08T03:20:07,855 copying build/lib/MEDS_transforms/stages/add_time_derived_measurements/examples/in_example_pipeline/cfg.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/add_time_derived_measurements/examples/in_example_pipeline 2026-04-08T03:20:07,857 copying build/lib/MEDS_transforms/stages/add_time_derived_measurements/examples/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/add_time_derived_measurements/examples 2026-04-08T03:20:07,859 creating build/bdist.linux-armv7l/wheel/MEDS_transforms/stages/add_time_derived_measurements/examples/on_raw_static_data 2026-04-08T03:20:07,860 copying build/lib/MEDS_transforms/stages/add_time_derived_measurements/examples/on_raw_static_data/out_data.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/add_time_derived_measurements/examples/on_raw_static_data 2026-04-08T03:20:07,862 copying build/lib/MEDS_transforms/stages/add_time_derived_measurements/examples/on_raw_static_data/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/add_time_derived_measurements/examples/on_raw_static_data 2026-04-08T03:20:07,864 copying build/lib/MEDS_transforms/stages/add_time_derived_measurements/examples/on_raw_static_data/_test_cfg.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/add_time_derived_measurements/examples/on_raw_static_data 2026-04-08T03:20:07,865 copying build/lib/MEDS_transforms/stages/add_time_derived_measurements/examples/on_raw_static_data/cfg.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/add_time_derived_measurements/examples/on_raw_static_data 2026-04-08T03:20:07,867 copying build/lib/MEDS_transforms/stages/add_time_derived_measurements/timeline_tokens.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/add_time_derived_measurements 2026-04-08T03:20:07,870 copying build/lib/MEDS_transforms/stages/add_time_derived_measurements/__init__.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/add_time_derived_measurements 2026-04-08T03:20:07,872 copying build/lib/MEDS_transforms/stages/add_time_derived_measurements/time_of_day.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/add_time_derived_measurements 2026-04-08T03:20:07,874 copying build/lib/MEDS_transforms/stages/add_time_derived_measurements/age.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/add_time_derived_measurements 2026-04-08T03:20:07,876 copying build/lib/MEDS_transforms/stages/add_time_derived_measurements/config.yaml -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/add_time_derived_measurements 2026-04-08T03:20:07,878 copying build/lib/MEDS_transforms/stages/add_time_derived_measurements/README.md -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/add_time_derived_measurements 2026-04-08T03:20:07,880 copying build/lib/MEDS_transforms/stages/add_time_derived_measurements/utils.py -> build/bdist.linux-armv7l/wheel/./MEDS_transforms/stages/add_time_derived_measurements 2026-04-08T03:20:07,882 running install_egg_info 2026-04-08T03:20:07,889 Copying src/MEDS_transforms.egg-info to build/bdist.linux-armv7l/wheel/./MEDS_transforms-0.6.3-py3.11.egg-info 2026-04-08T03:20:07,901 running install_scripts 2026-04-08T03:20:07,913 creating build/bdist.linux-armv7l/wheel/meds_transforms-0.6.3.dist-info/WHEEL 2026-04-08T03:20:07,915 creating '/tmp/pip-wheel-94ui8i4u/.tmp-0zjn7fio/meds_transforms-0.6.3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-04-08T03:20:07,918 adding 'MEDS_transforms/__init__.py' 2026-04-08T03:20:07,919 adding 'MEDS_transforms/__main__.py' 2026-04-08T03:20:07,923 adding 'MEDS_transforms/parser.py' 2026-04-08T03:20:07,926 adding 'MEDS_transforms/pytest_plugin.py' 2026-04-08T03:20:07,928 adding 'MEDS_transforms/runner.py' 2026-04-08T03:20:07,930 adding 'MEDS_transforms/utils.py' 2026-04-08T03:20:07,932 adding 'MEDS_transforms/compute_modes/__init__.py' 2026-04-08T03:20:07,934 adding 'MEDS_transforms/compute_modes/compute_fn.py' 2026-04-08T03:20:07,936 adding 'MEDS_transforms/compute_modes/match_revise.py' 2026-04-08T03:20:07,938 adding 'MEDS_transforms/configs/__init__.py' 2026-04-08T03:20:07,939 adding 'MEDS_transforms/configs/_main.yaml' 2026-04-08T03:20:07,940 adding 'MEDS_transforms/configs/_runner.yaml' 2026-04-08T03:20:07,941 adding 'MEDS_transforms/configs/dataset.py' 2026-04-08T03:20:07,944 adding 'MEDS_transforms/configs/pipeline.py' 2026-04-08T03:20:07,946 adding 'MEDS_transforms/configs/stage.py' 2026-04-08T03:20:07,948 adding 'MEDS_transforms/configs/utils.py' 2026-04-08T03:20:07,950 adding 'MEDS_transforms/dataframe/__init__.py' 2026-04-08T03:20:07,951 adding 'MEDS_transforms/dataframe/read_fn.py' 2026-04-08T03:20:07,952 adding 'MEDS_transforms/dataframe/types.py' 2026-04-08T03:20:07,953 adding 'MEDS_transforms/dataframe/write_fn.py' 2026-04-08T03:20:07,955 adding 'MEDS_transforms/mapreduce/__init__.py' 2026-04-08T03:20:07,956 adding 'MEDS_transforms/mapreduce/mapper.py' 2026-04-08T03:20:07,958 adding 'MEDS_transforms/mapreduce/reducer.py' 2026-04-08T03:20:07,960 adding 'MEDS_transforms/mapreduce/rwlock.py' 2026-04-08T03:20:07,962 adding 'MEDS_transforms/mapreduce/shard_iteration.py' 2026-04-08T03:20:07,965 adding 'MEDS_transforms/mapreduce/stage.py' 2026-04-08T03:20:07,968 adding 'MEDS_transforms/stages/README.md' 2026-04-08T03:20:07,969 adding 'MEDS_transforms/stages/__init__.py' 2026-04-08T03:20:07,977 adding 'MEDS_transforms/stages/base.py' 2026-04-08T03:20:07,979 adding 'MEDS_transforms/stages/discovery.py' 2026-04-08T03:20:07,980 adding 'MEDS_transforms/stages/docgen.py' 2026-04-08T03:20:07,985 adding 'MEDS_transforms/stages/examples.py' 2026-04-08T03:20:07,988 adding 'MEDS_transforms/stages/add_time_derived_measurements/README.md' 2026-04-08T03:20:07,989 adding 'MEDS_transforms/stages/add_time_derived_measurements/__init__.py' 2026-04-08T03:20:07,991 adding 'MEDS_transforms/stages/add_time_derived_measurements/add_time_derived_measurements.py' 2026-04-08T03:20:07,993 adding 'MEDS_transforms/stages/add_time_derived_measurements/age.py' 2026-04-08T03:20:07,994 adding 'MEDS_transforms/stages/add_time_derived_measurements/config.yaml' 2026-04-08T03:20:07,996 adding 'MEDS_transforms/stages/add_time_derived_measurements/time_of_day.py' 2026-04-08T03:20:07,998 adding 'MEDS_transforms/stages/add_time_derived_measurements/timeline_tokens.py' 2026-04-08T03:20:08,000 adding 'MEDS_transforms/stages/add_time_derived_measurements/utils.py' 2026-04-08T03:20:08,002 adding 'MEDS_transforms/stages/add_time_derived_measurements/examples/__init__.py' 2026-04-08T03:20:08,004 adding 'MEDS_transforms/stages/add_time_derived_measurements/examples/in_example_pipeline/__init__.py' 2026-04-08T03:20:08,005 adding 'MEDS_transforms/stages/add_time_derived_measurements/examples/in_example_pipeline/cfg.yaml' 2026-04-08T03:20:08,006 adding 'MEDS_transforms/stages/add_time_derived_measurements/examples/in_example_pipeline/in.yaml' 2026-04-08T03:20:08,008 adding 'MEDS_transforms/stages/add_time_derived_measurements/examples/in_example_pipeline/out_data.yaml' 2026-04-08T03:20:08,010 adding 'MEDS_transforms/stages/add_time_derived_measurements/examples/on_raw_static_data/__init__.py' 2026-04-08T03:20:08,011 adding 'MEDS_transforms/stages/add_time_derived_measurements/examples/on_raw_static_data/_test_cfg.yaml' 2026-04-08T03:20:08,012 adding 'MEDS_transforms/stages/add_time_derived_measurements/examples/on_raw_static_data/cfg.yaml' 2026-04-08T03:20:08,014 adding 'MEDS_transforms/stages/add_time_derived_measurements/examples/on_raw_static_data/out_data.yaml' 2026-04-08T03:20:08,015 adding 'MEDS_transforms/stages/aggregate_code_metadata/__init__.py' 2026-04-08T03:20:08,019 adding 'MEDS_transforms/stages/aggregate_code_metadata/aggregate_code_metadata.py' 2026-04-08T03:20:08,021 adding 'MEDS_transforms/stages/aggregate_code_metadata/examples/__init__.py' 2026-04-08T03:20:08,023 adding 'MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/__init__.py' 2026-04-08T03:20:08,024 adding 'MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_normalization/__init__.py' 2026-04-08T03:20:08,026 adding 'MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_normalization/_test_cfg.yaml' 2026-04-08T03:20:08,027 adding 'MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_normalization/cfg.yaml' 2026-04-08T03:20:08,028 adding 'MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_normalization/in.yaml' 2026-04-08T03:20:08,029 adding 'MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_normalization/out_metadata.yaml' 2026-04-08T03:20:08,031 adding 'MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_outlier_detection/__init__.py' 2026-04-08T03:20:08,033 adding 'MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_outlier_detection/_test_cfg.yaml' 2026-04-08T03:20:08,034 adding 'MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_outlier_detection/cfg.yaml' 2026-04-08T03:20:08,035 adding 'MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_outlier_detection/in.yaml' 2026-04-08T03:20:08,036 adding 'MEDS_transforms/stages/aggregate_code_metadata/examples/in_example_pipeline/fit_outlier_detection/out_metadata.yaml' 2026-04-08T03:20:08,038 adding 'MEDS_transforms/stages/aggregate_code_metadata/examples/on_raw_static_data/__init__.py' 2026-04-08T03:20:08,040 adding 'MEDS_transforms/stages/aggregate_code_metadata/examples/on_raw_static_data/_test_cfg.yaml' 2026-04-08T03:20:08,041 adding 'MEDS_transforms/stages/aggregate_code_metadata/examples/on_raw_static_data/cfg.yaml' 2026-04-08T03:20:08,042 adding 'MEDS_transforms/stages/aggregate_code_metadata/examples/on_raw_static_data/out_metadata.yaml' 2026-04-08T03:20:08,044 adding 'MEDS_transforms/stages/aggregate_code_metadata/examples/with_not_split_defined_shards/__init__.py' 2026-04-08T03:20:08,045 adding 'MEDS_transforms/stages/aggregate_code_metadata/examples/with_not_split_defined_shards/_test_cfg.yaml' 2026-04-08T03:20:08,047 adding 'MEDS_transforms/stages/aggregate_code_metadata/examples/with_not_split_defined_shards/cfg.yaml' 2026-04-08T03:20:08,048 adding 'MEDS_transforms/stages/aggregate_code_metadata/examples/with_not_split_defined_shards/in.yaml' 2026-04-08T03:20:08,050 adding 'MEDS_transforms/stages/aggregate_code_metadata/examples/with_not_split_defined_shards/out_metadata.yaml' 2026-04-08T03:20:08,051 adding 'MEDS_transforms/stages/bin_numeric_values/__init__.py' 2026-04-08T03:20:08,055 adding 'MEDS_transforms/stages/bin_numeric_values/bin_numeric_values.py' 2026-04-08T03:20:08,056 adding 'MEDS_transforms/stages/bin_numeric_values/config.yaml' 2026-04-08T03:20:08,058 adding 'MEDS_transforms/stages/bin_numeric_values/examples/__init__.py' 2026-04-08T03:20:08,059 adding 'MEDS_transforms/stages/bin_numeric_values/examples/cfg.yaml' 2026-04-08T03:20:08,061 adding 'MEDS_transforms/stages/bin_numeric_values/examples/in.yaml' 2026-04-08T03:20:08,062 adding 'MEDS_transforms/stages/bin_numeric_values/examples/out_data.yaml' 2026-04-08T03:20:08,064 adding 'MEDS_transforms/stages/bin_numeric_values/examples/custom_bins_fp/__init__.py' 2026-04-08T03:20:08,065 adding 'MEDS_transforms/stages/bin_numeric_values/examples/custom_bins_fp/cfg.yaml' 2026-04-08T03:20:08,066 adding 'MEDS_transforms/stages/bin_numeric_values/examples/custom_bins_fp/custom_bins.yaml' 2026-04-08T03:20:08,067 adding 'MEDS_transforms/stages/bin_numeric_values/examples/custom_bins_fp/in.yaml' 2026-04-08T03:20:08,068 adding 'MEDS_transforms/stages/bin_numeric_values/examples/custom_bins_fp/out_data.yaml' 2026-04-08T03:20:08,070 adding 'MEDS_transforms/stages/extract_values/__init__.py' 2026-04-08T03:20:08,072 adding 'MEDS_transforms/stages/extract_values/extract_values.py' 2026-04-08T03:20:08,073 adding 'MEDS_transforms/stages/extract_values/examples/__init__.py' 2026-04-08T03:20:08,074 adding 'MEDS_transforms/stages/extract_values/examples/_test_cfg.yaml' 2026-04-08T03:20:08,075 adding 'MEDS_transforms/stages/extract_values/examples/cfg.yaml' 2026-04-08T03:20:08,077 adding 'MEDS_transforms/stages/extract_values/examples/in.yaml' 2026-04-08T03:20:08,078 adding 'MEDS_transforms/stages/extract_values/examples/out_data.yaml' 2026-04-08T03:20:08,079 adding 'MEDS_transforms/stages/filter_measurements/__init__.py' 2026-04-08T03:20:08,081 adding 'MEDS_transforms/stages/filter_measurements/config.yaml' 2026-04-08T03:20:08,082 adding 'MEDS_transforms/stages/filter_measurements/filter_measurements.py' 2026-04-08T03:20:08,084 adding 'MEDS_transforms/stages/filter_measurements/examples/README.md' 2026-04-08T03:20:08,085 adding 'MEDS_transforms/stages/filter_measurements/examples/__init__.py' 2026-04-08T03:20:08,086 adding 'MEDS_transforms/stages/filter_measurements/examples/match_revise/__init__.py' 2026-04-08T03:20:08,087 adding 'MEDS_transforms/stages/filter_measurements/examples/match_revise/_test_cfg.yaml' 2026-04-08T03:20:08,089 adding 'MEDS_transforms/stages/filter_measurements/examples/match_revise/cfg.yaml' 2026-04-08T03:20:08,090 adding 'MEDS_transforms/stages/filter_measurements/examples/match_revise/in.yaml' 2026-04-08T03:20:08,091 adding 'MEDS_transforms/stages/filter_measurements/examples/match_revise/out_data.yaml' 2026-04-08T03:20:08,093 adding 'MEDS_transforms/stages/filter_measurements/examples/simple/__init__.py' 2026-04-08T03:20:08,094 adding 'MEDS_transforms/stages/filter_measurements/examples/simple/cfg.yaml' 2026-04-08T03:20:08,095 adding 'MEDS_transforms/stages/filter_measurements/examples/simple/in.yaml' 2026-04-08T03:20:08,097 adding 'MEDS_transforms/stages/filter_measurements/examples/simple/out_data.yaml' 2026-04-08T03:20:08,098 adding 'MEDS_transforms/stages/filter_subjects/__init__.py' 2026-04-08T03:20:08,100 adding 'MEDS_transforms/stages/filter_subjects/config.yaml' 2026-04-08T03:20:08,101 adding 'MEDS_transforms/stages/filter_subjects/filter_subjects.py' 2026-04-08T03:20:08,103 adding 'MEDS_transforms/stages/filter_subjects/examples/__init__.py' 2026-04-08T03:20:08,104 adding 'MEDS_transforms/stages/filter_subjects/examples/cfg.yaml' 2026-04-08T03:20:08,105 adding 'MEDS_transforms/stages/filter_subjects/examples/out_data.yaml' 2026-04-08T03:20:08,107 adding 'MEDS_transforms/stages/fit_vocabulary_indices/__init__.py' 2026-04-08T03:20:08,108 adding 'MEDS_transforms/stages/fit_vocabulary_indices/config.yaml' 2026-04-08T03:20:08,110 adding 'MEDS_transforms/stages/fit_vocabulary_indices/fit_vocabulary_indices.py' 2026-04-08T03:20:08,112 adding 'MEDS_transforms/stages/fit_vocabulary_indices/examples/__init__.py' 2026-04-08T03:20:08,114 adding 'MEDS_transforms/stages/fit_vocabulary_indices/examples/in_example_pipeline/__init__.py' 2026-04-08T03:20:08,115 adding 'MEDS_transforms/stages/fit_vocabulary_indices/examples/in_example_pipeline/in.yaml' 2026-04-08T03:20:08,116 adding 'MEDS_transforms/stages/fit_vocabulary_indices/examples/in_example_pipeline/out_metadata.yaml' 2026-04-08T03:20:08,118 adding 'MEDS_transforms/stages/fit_vocabulary_indices/examples/on_raw_static_data/__init__.py' 2026-04-08T03:20:08,119 adding 'MEDS_transforms/stages/fit_vocabulary_indices/examples/on_raw_static_data/out_metadata.yaml' 2026-04-08T03:20:08,121 adding 'MEDS_transforms/stages/normalization/README.md' 2026-04-08T03:20:08,122 adding 'MEDS_transforms/stages/normalization/__init__.py' 2026-04-08T03:20:08,124 adding 'MEDS_transforms/stages/normalization/normalization.py' 2026-04-08T03:20:08,125 adding 'MEDS_transforms/stages/normalization/examples/__init__.py' 2026-04-08T03:20:08,127 adding 'MEDS_transforms/stages/normalization/examples/in_example_pipeline/__init__.py' 2026-04-08T03:20:08,128 adding 'MEDS_transforms/stages/normalization/examples/in_example_pipeline/in.yaml' 2026-04-08T03:20:08,129 adding 'MEDS_transforms/stages/normalization/examples/in_example_pipeline/out_data.yaml' 2026-04-08T03:20:08,131 adding 'MEDS_transforms/stages/normalization/examples/on_raw_static_data/__init__.py' 2026-04-08T03:20:08,132 adding 'MEDS_transforms/stages/normalization/examples/on_raw_static_data/in.yaml' 2026-04-08T03:20:08,133 adding 'MEDS_transforms/stages/normalization/examples/on_raw_static_data/out_data.yaml' 2026-04-08T03:20:08,135 adding 'MEDS_transforms/stages/occlude_outliers/README.md' 2026-04-08T03:20:08,136 adding 'MEDS_transforms/stages/occlude_outliers/__init__.py' 2026-04-08T03:20:08,138 adding 'MEDS_transforms/stages/occlude_outliers/config.yaml' 2026-04-08T03:20:08,139 adding 'MEDS_transforms/stages/occlude_outliers/occlude_outliers.py' 2026-04-08T03:20:08,141 adding 'MEDS_transforms/stages/occlude_outliers/examples/__init__.py' 2026-04-08T03:20:08,143 adding 'MEDS_transforms/stages/occlude_outliers/examples/in_example_pipeline/__init__.py' 2026-04-08T03:20:08,144 adding 'MEDS_transforms/stages/occlude_outliers/examples/in_example_pipeline/cfg.yaml' 2026-04-08T03:20:08,145 adding 'MEDS_transforms/stages/occlude_outliers/examples/in_example_pipeline/in.yaml' 2026-04-08T03:20:08,146 adding 'MEDS_transforms/stages/occlude_outliers/examples/in_example_pipeline/out_data.yaml' 2026-04-08T03:20:08,148 adding 'MEDS_transforms/stages/occlude_outliers/examples/on_raw_static_data/__init__.py' 2026-04-08T03:20:08,149 adding 'MEDS_transforms/stages/occlude_outliers/examples/on_raw_static_data/cfg.yaml' 2026-04-08T03:20:08,151 adding 'MEDS_transforms/stages/occlude_outliers/examples/on_raw_static_data/in.yaml' 2026-04-08T03:20:08,152 adding 'MEDS_transforms/stages/occlude_outliers/examples/on_raw_static_data/out_data.yaml' 2026-04-08T03:20:08,154 adding 'MEDS_transforms/stages/reorder_measurements/__init__.py' 2026-04-08T03:20:08,155 adding 'MEDS_transforms/stages/reorder_measurements/config.yaml' 2026-04-08T03:20:08,157 adding 'MEDS_transforms/stages/reorder_measurements/reorder_measurements.py' 2026-04-08T03:20:08,158 adding 'MEDS_transforms/stages/reorder_measurements/examples/__init__.py' 2026-04-08T03:20:08,159 adding 'MEDS_transforms/stages/reorder_measurements/examples/cfg.yaml' 2026-04-08T03:20:08,161 adding 'MEDS_transforms/stages/reorder_measurements/examples/in.yaml' 2026-04-08T03:20:08,162 adding 'MEDS_transforms/stages/reorder_measurements/examples/out_data.yaml' 2026-04-08T03:20:08,164 adding 'MEDS_transforms/stages/reshard_to_split/__init__.py' 2026-04-08T03:20:08,165 adding 'MEDS_transforms/stages/reshard_to_split/config.yaml' 2026-04-08T03:20:08,167 adding 'MEDS_transforms/stages/reshard_to_split/reshard_to_split.py' 2026-04-08T03:20:08,169 adding 'MEDS_transforms/stages/reshard_to_split/examples/__init__.py' 2026-04-08T03:20:08,171 adding 'MEDS_transforms/stages/reshard_to_split/examples/cfg.yaml' 2026-04-08T03:20:08,172 adding 'MEDS_transforms/stages/reshard_to_split/examples/in.yaml' 2026-04-08T03:20:08,173 adding 'MEDS_transforms/stages/reshard_to_split/examples/out_data.yaml' 2026-04-08T03:20:08,176 adding 'meds_transforms-0.6.3.dist-info/licenses/LICENSE' 2026-04-08T03:20:08,179 adding 'meds_transforms-0.6.3.dist-info/METADATA' 2026-04-08T03:20:08,180 adding 'meds_transforms-0.6.3.dist-info/WHEEL' 2026-04-08T03:20:08,181 adding 'meds_transforms-0.6.3.dist-info/entry_points.txt' 2026-04-08T03:20:08,182 adding 'meds_transforms-0.6.3.dist-info/top_level.txt' 2026-04-08T03:20:08,185 adding 'meds_transforms-0.6.3.dist-info/RECORD' 2026-04-08T03:20:08,190 removing build/bdist.linux-armv7l/wheel 2026-04-08T03:20:08,342 Building wheel for meds-transforms (pyproject.toml): finished with status 'done' 2026-04-08T03:20:08,352 Created wheel for meds-transforms: filename=meds_transforms-0.6.3-py3-none-any.whl size=206617 sha256=f5142e046365b346e2df505dfe6cf5d970ecf94fa3eb84e7ed167bdbaaa210c4 2026-04-08T03:20:08,353 Stored in directory: /tmp/pip-ephem-wheel-cache-v9c41fcj/wheels/7a/d8/12/a1b2e08a767006f9cc76462ddfa766f2dc18ac9e6f300dc9ad 2026-04-08T03:20:08,372 Successfully built meds-transforms 2026-04-08T03:20:08,382 Removed build tracker: '/tmp/pip-build-tracker-si3p4x0a'