2026-04-08T06:49:46,382 Created temporary directory: /tmp/pip-ephem-wheel-cache-vo1i5fuj 2026-04-08T06:49:46,383 Created temporary directory: /tmp/pip-build-tracker-o2dgsyor 2026-04-08T06:49:46,384 Initialized build tracking at /tmp/pip-build-tracker-o2dgsyor 2026-04-08T06:49:46,385 Created build tracker: /tmp/pip-build-tracker-o2dgsyor 2026-04-08T06:49:46,385 Entered build tracker: /tmp/pip-build-tracker-o2dgsyor 2026-04-08T06:49:46,386 Created temporary directory: /tmp/pip-wheel-x26fbvxz 2026-04-08T06:49:46,388 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-08T06:49:46,391 Created temporary directory: /tmp/pip-ephem-wheel-cache-dqlegobv 2026-04-08T06:49:46,417 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-08T06:49:46,421 2 location(s) to search for versions of ecell4: 2026-04-08T06:49:46,421 * https://pypi.org/simple/ecell4/ 2026-04-08T06:49:46,421 * https://www.piwheels.org/simple/ecell4/ 2026-04-08T06:49:46,421 Fetching project page and analyzing links: https://pypi.org/simple/ecell4/ 2026-04-08T06:49:46,422 Getting page https://pypi.org/simple/ecell4/ 2026-04-08T06:49:46,424 Found index url https://pypi.org/simple 2026-04-08T06:49:46,647 Fetched page https://pypi.org/simple/ecell4/ as application/vnd.pypi.simple.v1+json 2026-04-08T06:49:46,650 Skipping link: No binaries permitted for ecell4: https://files.pythonhosted.org/packages/e5/85/0f9fc9f93aade2f235ffc1b188986221e39d85a0faf5895e131c7556b00f/ecell4-1.0.dev1-py3-none-any.whl (from https://pypi.org/simple/ecell4/) 2026-04-08T06:49:46,651 Found link https://files.pythonhosted.org/packages/63/57/4026e5e7bd6bfcf5fb366698615e58c7c5dfdb2692e4a86aba1b4008f3fe/ecell4-1.0.dev1.tar.gz (from https://pypi.org/simple/ecell4/), version: 1.0.dev1 2026-04-08T06:49:46,652 Skipping link: No binaries permitted for ecell4: https://files.pythonhosted.org/packages/ca/84/7464be7aead1482d9b3076037d3b0c080408611bba9dc583921f4bd6db52/ecell4-1.0.dev2-py3-none-any.whl (from https://pypi.org/simple/ecell4/) 2026-04-08T06:49:46,653 Found link https://files.pythonhosted.org/packages/fb/cf/f2d106676733620b16b30b7c044be6eb86456730ea1868afa7fc069bde76/ecell4-1.0.dev2.tar.gz (from https://pypi.org/simple/ecell4/), version: 1.0.dev2 2026-04-08T06:49:46,653 Skipping link: No binaries permitted for ecell4: https://files.pythonhosted.org/packages/7c/ee/0dc2dcf26c4ac87f48735802748651bfdeb9d77fd9981c50567c0bb20cfb/ecell4-1.0.dev3-py3-none-any.whl (from https://pypi.org/simple/ecell4/) 2026-04-08T06:49:46,654 Found link https://files.pythonhosted.org/packages/44/e8/3f966e46a9d9849c91d3a4bd2a1f283d17ef20f76b96a62b795167bab7a5/ecell4-1.0.dev3.tar.gz (from https://pypi.org/simple/ecell4/), version: 1.0.dev3 2026-04-08T06:49:46,655 Found link https://files.pythonhosted.org/packages/b6/2d/078fd219c2a79ed3d5bff2990256bc79b8b4cf7df23ee5f6c64cc7559828/ecell4-1.0.0.tar.gz (from https://pypi.org/simple/ecell4/), version: 1.0.0 2026-04-08T06:49:46,655 Found link https://files.pythonhosted.org/packages/e3/dc/6110da1e63508abb2c89f845aba44e8bb688401aaf3abb2f5c84b09dfa89/ecell4-1.1.1.tar.gz (from https://pypi.org/simple/ecell4/), version: 1.1.1 2026-04-08T06:49:46,656 Found link https://files.pythonhosted.org/packages/14/40/2c1990215e7ea36993b7034905a5bd5b16dbbe924f0bdffbe9ff4bb72115/ecell4-1.1.2.tar.gz (from https://pypi.org/simple/ecell4/), version: 1.1.2 2026-04-08T06:49:46,657 Skipping link: No binaries permitted for ecell4: https://files.pythonhosted.org/packages/3f/a4/306e21ad0b8221c78a784cf58240fac5cdfee485dd7d1491c15e797ba2b9/ecell4-1.2.0b1-py3-none-any.whl (from https://pypi.org/simple/ecell4/) 2026-04-08T06:49:46,657 Found link https://files.pythonhosted.org/packages/6b/d6/d5384dce62e4f082b9ab1943ffd9991726200b780c60c0424a65b82f2fd6/ecell4-1.2.0b1.tar.gz (from https://pypi.org/simple/ecell4/), version: 1.2.0b1 2026-04-08T06:49:46,658 Skipping link: No binaries permitted for ecell4: https://files.pythonhosted.org/packages/a7/f0/5224bedb2b90a3fb29ab19a18140df1c125babc7aef04401424aa9578859/ecell4-1.2.1-py3-none-any.whl (from https://pypi.org/simple/ecell4/) 2026-04-08T06:49:46,659 Found link https://files.pythonhosted.org/packages/9d/b0/e697e4c0174d8721cbaed752de3805d88ed65829da9bde1f10d1001d17f0/ecell4-1.2.1.tar.gz (from https://pypi.org/simple/ecell4/), version: 1.2.1 2026-04-08T06:49:46,660 Skipping link: No binaries permitted for ecell4: https://files.pythonhosted.org/packages/a8/4d/87d2ab942d8f9cf05f40845e9802e9f5a96bb63887e03f2a006653640718/ecell4-1.2.2-py3-none-any.whl (from https://pypi.org/simple/ecell4/) 2026-04-08T06:49:46,660 Found link https://files.pythonhosted.org/packages/f4/eb/e8c7d93d98c80061c725c580f9afade8df34f799c212b9f9947a0c081cea/ecell4-1.2.2.tar.gz (from https://pypi.org/simple/ecell4/), version: 1.2.2 2026-04-08T06:49:46,661 Fetching project page and analyzing links: https://www.piwheels.org/simple/ecell4/ 2026-04-08T06:49:46,662 Getting page https://www.piwheels.org/simple/ecell4/ 2026-04-08T06:49:46,663 Found index url https://www.piwheels.org/simple 2026-04-08T06:49:46,836 Fetched page https://www.piwheels.org/simple/ecell4/ as text/html 2026-04-08T06:49:46,840 Skipping link: No binaries permitted for ecell4: https://archive1.piwheels.org/simple/ecell4/ecell4-1.2.1-py3-none-any.whl#sha256=d917bd07de8ffba6492bd4622d07eb92dcdae06749b92ef9ef3baa75d3460225 (from https://www.piwheels.org/simple/ecell4/) 2026-04-08T06:49:46,840 Skipping link: No binaries permitted for ecell4: https://archive1.piwheels.org/simple/ecell4/ecell4-1.2.0b1-py3-none-any.whl#sha256=274b25ebb26bb908b8f8d9250f219ac4a0b783917a4802df611a278a293f0ade (from https://www.piwheels.org/simple/ecell4/) 2026-04-08T06:49:46,841 Skipping link: No binaries permitted for ecell4: https://archive1.piwheels.org/simple/ecell4/ecell4-1.1.2-py3-none-any.whl#sha256=d74c6ad19fac6ab7a38605d928d493a13aa87ce047e19c65c2bbee5729811c8c (from https://www.piwheels.org/simple/ecell4/) 2026-04-08T06:49:46,841 Skipping link: No binaries permitted for ecell4: https://archive1.piwheels.org/simple/ecell4/ecell4-1.1.1-py3-none-any.whl#sha256=b3baefc8bf0914106ca977b7bd72716ea7859b3b74d871b3d9998db3f51c7bfd (from https://www.piwheels.org/simple/ecell4/) 2026-04-08T06:49:46,842 Skipping link: No binaries permitted for ecell4: https://archive1.piwheels.org/simple/ecell4/ecell4-1.0.0-py3-none-any.whl#sha256=f629902a4dfdcecc09f4f7d02c36248cbe9004d97afd6a0436db30dda7e5c96c (from https://www.piwheels.org/simple/ecell4/) 2026-04-08T06:49:46,842 Skipping link: No binaries permitted for ecell4: https://archive1.piwheels.org/simple/ecell4/ecell4-1.0.dev3-py3-none-any.whl#sha256=0b9a51ce9668903f086fd626e7a8fb5d64840be058004d8941ff0e833d4956b1 (from https://www.piwheels.org/simple/ecell4/) 2026-04-08T06:49:46,843 Skipping link: No binaries permitted for ecell4: https://archive1.piwheels.org/simple/ecell4/ecell4-1.0.dev2-py3-none-any.whl#sha256=2fb2ea2f66d4abe79ffa3239894f2bb3dffeec699f279b7eef44a88570053e0b (from https://www.piwheels.org/simple/ecell4/) 2026-04-08T06:49:46,844 Skipping link: No binaries permitted for ecell4: https://archive1.piwheels.org/simple/ecell4/ecell4-1.0.dev1-py3-none-any.whl#sha256=98ad211f7ba41a729f61928ae2b0e70e60b7fb369d79e0e36bfe487e29cff739 (from https://www.piwheels.org/simple/ecell4/) 2026-04-08T06:49:46,845 Skipping link: not a file: https://www.piwheels.org/simple/ecell4/ 2026-04-08T06:49:46,845 Skipping link: not a file: https://pypi.org/simple/ecell4/ 2026-04-08T06:49:46,866 Given no hashes to check 1 links for project 'ecell4': discarding no candidates 2026-04-08T06:49:46,886 Collecting ecell4==1.2.2 2026-04-08T06:49:46,888 Created temporary directory: /tmp/pip-unpack-kygospcj 2026-04-08T06:49:47,111 Downloading ecell4-1.2.2.tar.gz (130 kB) 2026-04-08T06:49:47,376 Added ecell4==1.2.2 from https://files.pythonhosted.org/packages/f4/eb/e8c7d93d98c80061c725c580f9afade8df34f799c212b9f9947a0c081cea/ecell4-1.2.2.tar.gz to build tracker '/tmp/pip-build-tracker-o2dgsyor' 2026-04-08T06:49:47,378 Running setup.py (path:/tmp/pip-wheel-x26fbvxz/ecell4_cd64f7c674a64da6b796676532305e41/setup.py) egg_info for package ecell4 2026-04-08T06:49:47,379 Created temporary directory: /tmp/pip-pip-egg-info-jno5vwqh 2026-04-08T06:49:47,379 Preparing metadata (setup.py): started 2026-04-08T06:49:47,380 Running command python setup.py egg_info 2026-04-08T06:49:48,320 running egg_info 2026-04-08T06:49:48,347 creating /tmp/pip-pip-egg-info-jno5vwqh/ecell4.egg-info 2026-04-08T06:49:48,348 writing /tmp/pip-pip-egg-info-jno5vwqh/ecell4.egg-info/PKG-INFO 2026-04-08T06:49:48,352 writing dependency_links to /tmp/pip-pip-egg-info-jno5vwqh/ecell4.egg-info/dependency_links.txt 2026-04-08T06:49:48,355 writing requirements to /tmp/pip-pip-egg-info-jno5vwqh/ecell4.egg-info/requires.txt 2026-04-08T06:49:48,356 writing top-level names to /tmp/pip-pip-egg-info-jno5vwqh/ecell4.egg-info/top_level.txt 2026-04-08T06:49:48,357 writing manifest file '/tmp/pip-pip-egg-info-jno5vwqh/ecell4.egg-info/SOURCES.txt' 2026-04-08T06:49:48,457 reading manifest file '/tmp/pip-pip-egg-info-jno5vwqh/ecell4.egg-info/SOURCES.txt' 2026-04-08T06:49:48,459 reading manifest template 'MANIFEST.in' 2026-04-08T06:49:48,460 adding license file 'LICENSE' 2026-04-08T06:49:48,465 writing manifest file '/tmp/pip-pip-egg-info-jno5vwqh/ecell4.egg-info/SOURCES.txt' 2026-04-08T06:49:48,572 Preparing metadata (setup.py): finished with status 'done' 2026-04-08T06:49:48,576 Source in /tmp/pip-wheel-x26fbvxz/ecell4_cd64f7c674a64da6b796676532305e41 has version 1.2.2, which satisfies requirement ecell4==1.2.2 from https://files.pythonhosted.org/packages/f4/eb/e8c7d93d98c80061c725c580f9afade8df34f799c212b9f9947a0c081cea/ecell4-1.2.2.tar.gz 2026-04-08T06:49:48,577 Removed ecell4==1.2.2 from https://files.pythonhosted.org/packages/f4/eb/e8c7d93d98c80061c725c580f9afade8df34f799c212b9f9947a0c081cea/ecell4-1.2.2.tar.gz from build tracker '/tmp/pip-build-tracker-o2dgsyor' 2026-04-08T06:49:48,581 Created temporary directory: /tmp/pip-unpack-jxjga9zh 2026-04-08T06:49:48,582 Building wheels for collected packages: ecell4 2026-04-08T06:49:48,586 Created temporary directory: /tmp/pip-wheel-kdn3pndq 2026-04-08T06:49:48,587 Building wheel for ecell4 (setup.py): started 2026-04-08T06:49:48,588 Destination directory: /tmp/pip-wheel-kdn3pndq 2026-04-08T06:49:48,589 Running command python setup.py bdist_wheel 2026-04-08T06:49:49,423 running bdist_wheel 2026-04-08T06:49:49,556 running build 2026-04-08T06:49:49,556 running build_py 2026-04-08T06:49:49,588 creating build/lib/ecell4 2026-04-08T06:49:49,590 copying ecell4/__init__.py -> build/lib/ecell4 2026-04-08T06:49:49,592 copying ecell4/prelude.py -> build/lib/ecell4 2026-04-08T06:49:49,595 creating build/lib/ecell4/util 2026-04-08T06:49:49,596 copying ecell4/util/decorator.py -> build/lib/ecell4/util 2026-04-08T06:49:49,598 copying ecell4/util/viz.py -> build/lib/ecell4/util 2026-04-08T06:49:49,600 copying ecell4/util/__init__.py -> build/lib/ecell4/util 2026-04-08T06:49:49,602 copying ecell4/util/ports.py -> build/lib/ecell4/util 2026-04-08T06:49:49,605 copying ecell4/util/progressbar.py -> build/lib/ecell4/util 2026-04-08T06:49:49,607 copying ecell4/util/decorator_base.py -> build/lib/ecell4/util 2026-04-08T06:49:49,609 copying ecell4/util/parseobj.py -> build/lib/ecell4/util 2026-04-08T06:49:49,612 copying ecell4/util/session.py -> build/lib/ecell4/util 2026-04-08T06:49:49,615 copying ecell4/util/cyjs.py -> build/lib/ecell4/util 2026-04-08T06:49:49,617 copying ecell4/util/show.py -> build/lib/ecell4/util 2026-04-08T06:49:49,619 copying ecell4/util/logger.py -> build/lib/ecell4/util 2026-04-08T06:49:49,621 copying ecell4/util/simulation.py -> build/lib/ecell4/util 2026-04-08T06:49:49,623 copying ecell4/util/model_parser.py -> build/lib/ecell4/util 2026-04-08T06:49:49,626 creating build/lib/ecell4/extra 2026-04-08T06:49:49,627 copying ecell4/extra/latex.py -> build/lib/ecell4/extra 2026-04-08T06:49:49,630 copying ecell4/extra/__init__.py -> build/lib/ecell4/extra 2026-04-08T06:49:49,631 copying ecell4/extra/sge.py -> build/lib/ecell4/extra 2026-04-08T06:49:49,634 copying ecell4/extra/bdml.py -> build/lib/ecell4/extra 2026-04-08T06:49:49,636 copying ecell4/extra/unit.py -> build/lib/ecell4/extra 2026-04-08T06:49:49,637 copying ecell4/extra/unit_checker.py -> build/lib/ecell4/extra 2026-04-08T06:49:49,640 copying ecell4/extra/_pysb.py -> build/lib/ecell4/extra 2026-04-08T06:49:49,642 copying ecell4/extra/azure_batch.py -> build/lib/ecell4/extra 2026-04-08T06:49:49,645 copying ecell4/extra/slurm.py -> build/lib/ecell4/extra 2026-04-08T06:49:49,648 copying ecell4/extra/vtkview.py -> build/lib/ecell4/extra 2026-04-08T06:49:49,650 copying ecell4/extra/ensemble.py -> build/lib/ecell4/extra 2026-04-08T06:49:49,653 copying ecell4/extra/_unit.py -> build/lib/ecell4/extra 2026-04-08T06:49:49,656 creating build/lib/ecell4/datasource 2026-04-08T06:49:49,657 copying ecell4/datasource/uniprot.py -> build/lib/ecell4/datasource 2026-04-08T06:49:49,660 copying ecell4/datasource/biogrid.py -> build/lib/ecell4/datasource 2026-04-08T06:49:49,662 copying ecell4/datasource/ecocyc.py -> build/lib/ecell4/datasource 2026-04-08T06:49:49,664 copying ecell4/datasource/pubmed.py -> build/lib/ecell4/datasource 2026-04-08T06:49:49,666 copying ecell4/datasource/__init__.py -> build/lib/ecell4/datasource 2026-04-08T06:49:49,668 copying ecell4/datasource/sbml.py -> build/lib/ecell4/datasource 2026-04-08T06:49:49,670 copying ecell4/datasource/sparql.py -> build/lib/ecell4/datasource 2026-04-08T06:49:49,672 copying ecell4/datasource/string.py -> build/lib/ecell4/datasource 2026-04-08T06:49:49,674 copying ecell4/datasource/biocyc.py -> build/lib/ecell4/datasource 2026-04-08T06:49:49,676 copying ecell4/datasource/pdb.py -> build/lib/ecell4/datasource 2026-04-08T06:49:49,678 copying ecell4/datasource/rdf.py -> build/lib/ecell4/datasource 2026-04-08T06:49:49,680 copying ecell4/datasource/psicquic.py -> build/lib/ecell4/datasource 2026-04-08T06:49:49,683 creating build/lib/ecell4/mca 2026-04-08T06:49:49,684 copying ecell4/mca/network.py -> build/lib/ecell4/mca 2026-04-08T06:49:49,686 copying ecell4/mca/__init__.py -> build/lib/ecell4/mca 2026-04-08T06:49:49,688 copying ecell4/mca/cc.py -> build/lib/ecell4/mca 2026-04-08T06:49:49,690 creating build/lib/ecell4/plotting 2026-04-08T06:49:49,691 copying ecell4/plotting/_elegans.py -> build/lib/ecell4/plotting 2026-04-08T06:49:49,694 copying ecell4/plotting/__init__.py -> build/lib/ecell4/plotting 2026-04-08T06:49:49,697 copying ecell4/plotting/styles.py -> build/lib/ecell4/plotting 2026-04-08T06:49:49,699 copying ecell4/plotting/_plotly.py -> build/lib/ecell4/plotting 2026-04-08T06:49:49,701 copying ecell4/plotting/_matplotlib.py -> build/lib/ecell4/plotting 2026-04-08T06:49:49,703 copying ecell4/plotting/_core.py -> build/lib/ecell4/plotting 2026-04-08T06:49:49,712 creating build/lib/ecell4/util/templates 2026-04-08T06:49:49,713 copying ecell4/util/templates/init_cyjs.js -> build/lib/ecell4/util/templates 2026-04-08T06:49:49,715 copying ecell4/util/templates/template.html -> build/lib/ecell4/util/templates 2026-04-08T06:49:49,718 copying ecell4/util/templates/particles.tmpl -> build/lib/ecell4/util/templates 2026-04-08T06:49:49,720 copying ecell4/util/templates/nya.tmpl -> build/lib/ecell4/util/templates 2026-04-08T06:49:49,722 copying ecell4/util/templates/movie.tmpl -> build/lib/ecell4/util/templates 2026-04-08T06:49:49,724 creating build/lib/ecell4/util/templates/ecelllogo 2026-04-08T06:49:49,725 copying ecell4/util/templates/ecelllogo/logo02.png -> build/lib/ecell4/util/templates/ecelllogo 2026-04-08T06:49:49,728 copying ecell4/util/templates/ecelllogo/logo03.png -> build/lib/ecell4/util/templates/ecelllogo 2026-04-08T06:49:49,730 copying ecell4/util/templates/ecelllogo/logo15.png -> build/lib/ecell4/util/templates/ecelllogo 2026-04-08T06:49:49,732 copying ecell4/util/templates/ecelllogo/logo04.png -> build/lib/ecell4/util/templates/ecelllogo 2026-04-08T06:49:49,735 copying ecell4/util/templates/ecelllogo/logo07.png -> build/lib/ecell4/util/templates/ecelllogo 2026-04-08T06:49:49,737 copying ecell4/util/templates/ecelllogo/logo06.png -> build/lib/ecell4/util/templates/ecelllogo 2026-04-08T06:49:49,739 copying ecell4/util/templates/ecelllogo/logo12.png -> build/lib/ecell4/util/templates/ecelllogo 2026-04-08T06:49:49,742 copying ecell4/util/templates/ecelllogo/logo11.png -> build/lib/ecell4/util/templates/ecelllogo 2026-04-08T06:49:49,744 copying ecell4/util/templates/ecelllogo/logo14.png -> build/lib/ecell4/util/templates/ecelllogo 2026-04-08T06:49:49,746 copying ecell4/util/templates/ecelllogo/logo05.png -> build/lib/ecell4/util/templates/ecelllogo 2026-04-08T06:49:49,748 copying ecell4/util/templates/ecelllogo/logo13.png -> build/lib/ecell4/util/templates/ecelllogo 2026-04-08T06:49:49,750 copying ecell4/util/templates/ecelllogo/logo09.png -> build/lib/ecell4/util/templates/ecelllogo 2026-04-08T06:49:49,752 copying ecell4/util/templates/ecelllogo/logo08.png -> build/lib/ecell4/util/templates/ecelllogo 2026-04-08T06:49:49,754 copying ecell4/util/templates/ecelllogo/logo01.png -> build/lib/ecell4/util/templates/ecelllogo 2026-04-08T06:49:49,757 copying ecell4/util/templates/ecelllogo/logo10.png -> build/lib/ecell4/util/templates/ecelllogo 2026-04-08T06:49:49,788 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2026-04-08T06:49:49,789 !! 2026-04-08T06:49:49,790 ******************************************************************************** 2026-04-08T06:49:49,791 Please avoid running ``setup.py`` directly. 2026-04-08T06:49:49,791 Instead, use pypa/build, pypa/installer or other 2026-04-08T06:49:49,792 standards-based tools. 2026-04-08T06:49:49,793 This deprecation is overdue, please update your project and remove deprecated 2026-04-08T06:49:49,793 calls to avoid build errors in the future. 2026-04-08T06:49:49,794 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2026-04-08T06:49:49,795 ******************************************************************************** 2026-04-08T06:49:49,796 !! 2026-04-08T06:49:49,796 self.initialize_options() 2026-04-08T06:49:49,816 installing to build/bdist.linux-armv7l/wheel 2026-04-08T06:49:49,817 running install 2026-04-08T06:49:49,840 running install_lib 2026-04-08T06:49:49,867 creating build/bdist.linux-armv7l/wheel 2026-04-08T06:49:49,870 creating build/bdist.linux-armv7l/wheel/ecell4 2026-04-08T06:49:49,871 copying build/lib/ecell4/__init__.py -> build/bdist.linux-armv7l/wheel/./ecell4 2026-04-08T06:49:49,874 creating build/bdist.linux-armv7l/wheel/ecell4/datasource 2026-04-08T06:49:49,875 copying build/lib/ecell4/datasource/uniprot.py -> build/bdist.linux-armv7l/wheel/./ecell4/datasource 2026-04-08T06:49:49,878 copying build/lib/ecell4/datasource/biogrid.py -> build/bdist.linux-armv7l/wheel/./ecell4/datasource 2026-04-08T06:49:49,880 copying build/lib/ecell4/datasource/ecocyc.py -> build/bdist.linux-armv7l/wheel/./ecell4/datasource 2026-04-08T06:49:49,882 copying build/lib/ecell4/datasource/pubmed.py -> build/bdist.linux-armv7l/wheel/./ecell4/datasource 2026-04-08T06:49:49,885 copying build/lib/ecell4/datasource/__init__.py -> build/bdist.linux-armv7l/wheel/./ecell4/datasource 2026-04-08T06:49:49,887 copying build/lib/ecell4/datasource/sbml.py -> build/bdist.linux-armv7l/wheel/./ecell4/datasource 2026-04-08T06:49:49,889 copying build/lib/ecell4/datasource/sparql.py -> build/bdist.linux-armv7l/wheel/./ecell4/datasource 2026-04-08T06:49:49,891 copying build/lib/ecell4/datasource/string.py -> build/bdist.linux-armv7l/wheel/./ecell4/datasource 2026-04-08T06:49:49,893 copying build/lib/ecell4/datasource/biocyc.py -> build/bdist.linux-armv7l/wheel/./ecell4/datasource 2026-04-08T06:49:49,895 copying build/lib/ecell4/datasource/pdb.py -> build/bdist.linux-armv7l/wheel/./ecell4/datasource 2026-04-08T06:49:49,897 copying build/lib/ecell4/datasource/rdf.py -> build/bdist.linux-armv7l/wheel/./ecell4/datasource 2026-04-08T06:49:49,899 copying build/lib/ecell4/datasource/psicquic.py -> build/bdist.linux-armv7l/wheel/./ecell4/datasource 2026-04-08T06:49:49,902 creating build/bdist.linux-armv7l/wheel/ecell4/plotting 2026-04-08T06:49:49,903 copying build/lib/ecell4/plotting/_elegans.py -> build/bdist.linux-armv7l/wheel/./ecell4/plotting 2026-04-08T06:49:49,906 copying build/lib/ecell4/plotting/__init__.py -> build/bdist.linux-armv7l/wheel/./ecell4/plotting 2026-04-08T06:49:49,909 copying build/lib/ecell4/plotting/styles.py -> build/bdist.linux-armv7l/wheel/./ecell4/plotting 2026-04-08T06:49:49,911 copying build/lib/ecell4/plotting/_plotly.py -> build/bdist.linux-armv7l/wheel/./ecell4/plotting 2026-04-08T06:49:49,913 copying build/lib/ecell4/plotting/_matplotlib.py -> build/bdist.linux-armv7l/wheel/./ecell4/plotting 2026-04-08T06:49:49,916 copying build/lib/ecell4/plotting/_core.py -> build/bdist.linux-armv7l/wheel/./ecell4/plotting 2026-04-08T06:49:49,919 creating build/bdist.linux-armv7l/wheel/ecell4/mca 2026-04-08T06:49:49,920 copying build/lib/ecell4/mca/network.py -> build/bdist.linux-armv7l/wheel/./ecell4/mca 2026-04-08T06:49:49,922 copying build/lib/ecell4/mca/__init__.py -> build/bdist.linux-armv7l/wheel/./ecell4/mca 2026-04-08T06:49:49,924 copying build/lib/ecell4/mca/cc.py -> build/bdist.linux-armv7l/wheel/./ecell4/mca 2026-04-08T06:49:49,926 copying build/lib/ecell4/prelude.py -> build/bdist.linux-armv7l/wheel/./ecell4 2026-04-08T06:49:49,928 creating build/bdist.linux-armv7l/wheel/ecell4/extra 2026-04-08T06:49:49,929 copying build/lib/ecell4/extra/latex.py -> build/bdist.linux-armv7l/wheel/./ecell4/extra 2026-04-08T06:49:49,932 copying build/lib/ecell4/extra/__init__.py -> build/bdist.linux-armv7l/wheel/./ecell4/extra 2026-04-08T06:49:49,933 copying build/lib/ecell4/extra/sge.py -> build/bdist.linux-armv7l/wheel/./ecell4/extra 2026-04-08T06:49:49,935 copying build/lib/ecell4/extra/bdml.py -> build/bdist.linux-armv7l/wheel/./ecell4/extra 2026-04-08T06:49:49,938 copying build/lib/ecell4/extra/unit.py -> build/bdist.linux-armv7l/wheel/./ecell4/extra 2026-04-08T06:49:49,939 copying build/lib/ecell4/extra/unit_checker.py -> build/bdist.linux-armv7l/wheel/./ecell4/extra 2026-04-08T06:49:49,942 copying build/lib/ecell4/extra/_pysb.py -> build/bdist.linux-armv7l/wheel/./ecell4/extra 2026-04-08T06:49:49,944 copying build/lib/ecell4/extra/azure_batch.py -> build/bdist.linux-armv7l/wheel/./ecell4/extra 2026-04-08T06:49:49,947 copying build/lib/ecell4/extra/slurm.py -> build/bdist.linux-armv7l/wheel/./ecell4/extra 2026-04-08T06:49:49,949 copying build/lib/ecell4/extra/vtkview.py -> build/bdist.linux-armv7l/wheel/./ecell4/extra 2026-04-08T06:49:49,952 copying build/lib/ecell4/extra/ensemble.py -> build/bdist.linux-armv7l/wheel/./ecell4/extra 2026-04-08T06:49:49,954 copying build/lib/ecell4/extra/_unit.py -> build/bdist.linux-armv7l/wheel/./ecell4/extra 2026-04-08T06:49:49,957 creating build/bdist.linux-armv7l/wheel/ecell4/util 2026-04-08T06:49:49,958 copying build/lib/ecell4/util/decorator.py -> build/bdist.linux-armv7l/wheel/./ecell4/util 2026-04-08T06:49:49,961 copying build/lib/ecell4/util/viz.py -> build/bdist.linux-armv7l/wheel/./ecell4/util 2026-04-08T06:49:49,963 copying build/lib/ecell4/util/__init__.py -> build/bdist.linux-armv7l/wheel/./ecell4/util 2026-04-08T06:49:49,965 copying build/lib/ecell4/util/ports.py -> build/bdist.linux-armv7l/wheel/./ecell4/util 2026-04-08T06:49:49,968 copying build/lib/ecell4/util/progressbar.py -> build/bdist.linux-armv7l/wheel/./ecell4/util 2026-04-08T06:49:49,970 copying build/lib/ecell4/util/decorator_base.py -> build/bdist.linux-armv7l/wheel/./ecell4/util 2026-04-08T06:49:49,972 copying build/lib/ecell4/util/parseobj.py -> build/bdist.linux-armv7l/wheel/./ecell4/util 2026-04-08T06:49:49,975 copying build/lib/ecell4/util/session.py -> build/bdist.linux-armv7l/wheel/./ecell4/util 2026-04-08T06:49:49,978 copying build/lib/ecell4/util/cyjs.py -> build/bdist.linux-armv7l/wheel/./ecell4/util 2026-04-08T06:49:49,979 copying build/lib/ecell4/util/show.py -> build/bdist.linux-armv7l/wheel/./ecell4/util 2026-04-08T06:49:49,982 creating build/bdist.linux-armv7l/wheel/ecell4/util/templates 2026-04-08T06:49:49,984 creating build/bdist.linux-armv7l/wheel/ecell4/util/templates/ecelllogo 2026-04-08T06:49:49,985 copying build/lib/ecell4/util/templates/ecelllogo/logo02.png -> build/bdist.linux-armv7l/wheel/./ecell4/util/templates/ecelllogo 2026-04-08T06:49:49,987 copying build/lib/ecell4/util/templates/ecelllogo/logo03.png -> build/bdist.linux-armv7l/wheel/./ecell4/util/templates/ecelllogo 2026-04-08T06:49:49,989 copying build/lib/ecell4/util/templates/ecelllogo/logo15.png -> build/bdist.linux-armv7l/wheel/./ecell4/util/templates/ecelllogo 2026-04-08T06:49:49,991 copying build/lib/ecell4/util/templates/ecelllogo/logo04.png -> build/bdist.linux-armv7l/wheel/./ecell4/util/templates/ecelllogo 2026-04-08T06:49:49,993 copying build/lib/ecell4/util/templates/ecelllogo/logo07.png -> build/bdist.linux-armv7l/wheel/./ecell4/util/templates/ecelllogo 2026-04-08T06:49:49,995 copying build/lib/ecell4/util/templates/ecelllogo/logo06.png -> build/bdist.linux-armv7l/wheel/./ecell4/util/templates/ecelllogo 2026-04-08T06:49:49,997 copying build/lib/ecell4/util/templates/ecelllogo/logo12.png -> build/bdist.linux-armv7l/wheel/./ecell4/util/templates/ecelllogo 2026-04-08T06:49:49,999 copying build/lib/ecell4/util/templates/ecelllogo/logo11.png -> build/bdist.linux-armv7l/wheel/./ecell4/util/templates/ecelllogo 2026-04-08T06:49:50,001 copying build/lib/ecell4/util/templates/ecelllogo/logo14.png -> build/bdist.linux-armv7l/wheel/./ecell4/util/templates/ecelllogo 2026-04-08T06:49:50,003 copying build/lib/ecell4/util/templates/ecelllogo/logo05.png -> build/bdist.linux-armv7l/wheel/./ecell4/util/templates/ecelllogo 2026-04-08T06:49:50,005 copying build/lib/ecell4/util/templates/ecelllogo/logo13.png -> build/bdist.linux-armv7l/wheel/./ecell4/util/templates/ecelllogo 2026-04-08T06:49:50,007 copying build/lib/ecell4/util/templates/ecelllogo/logo09.png -> build/bdist.linux-armv7l/wheel/./ecell4/util/templates/ecelllogo 2026-04-08T06:49:50,009 copying build/lib/ecell4/util/templates/ecelllogo/logo08.png -> build/bdist.linux-armv7l/wheel/./ecell4/util/templates/ecelllogo 2026-04-08T06:49:50,011 copying build/lib/ecell4/util/templates/ecelllogo/logo01.png -> build/bdist.linux-armv7l/wheel/./ecell4/util/templates/ecelllogo 2026-04-08T06:49:50,013 copying build/lib/ecell4/util/templates/ecelllogo/logo10.png -> build/bdist.linux-armv7l/wheel/./ecell4/util/templates/ecelllogo 2026-04-08T06:49:50,015 copying build/lib/ecell4/util/templates/init_cyjs.js -> build/bdist.linux-armv7l/wheel/./ecell4/util/templates 2026-04-08T06:49:50,017 copying build/lib/ecell4/util/templates/particles.tmpl -> build/bdist.linux-armv7l/wheel/./ecell4/util/templates 2026-04-08T06:49:50,019 copying build/lib/ecell4/util/templates/nya.tmpl -> build/bdist.linux-armv7l/wheel/./ecell4/util/templates 2026-04-08T06:49:50,021 copying build/lib/ecell4/util/templates/movie.tmpl -> build/bdist.linux-armv7l/wheel/./ecell4/util/templates 2026-04-08T06:49:50,023 copying build/lib/ecell4/util/templates/template.html -> build/bdist.linux-armv7l/wheel/./ecell4/util/templates 2026-04-08T06:49:50,025 copying build/lib/ecell4/util/logger.py -> build/bdist.linux-armv7l/wheel/./ecell4/util 2026-04-08T06:49:50,027 copying build/lib/ecell4/util/simulation.py -> build/bdist.linux-armv7l/wheel/./ecell4/util 2026-04-08T06:49:50,029 copying build/lib/ecell4/util/model_parser.py -> build/bdist.linux-armv7l/wheel/./ecell4/util 2026-04-08T06:49:50,032 running install_egg_info 2026-04-08T06:49:50,067 running egg_info 2026-04-08T06:49:50,094 writing ecell4.egg-info/PKG-INFO 2026-04-08T06:49:50,099 writing dependency_links to ecell4.egg-info/dependency_links.txt 2026-04-08T06:49:50,101 writing requirements to ecell4.egg-info/requires.txt 2026-04-08T06:49:50,102 writing top-level names to ecell4.egg-info/top_level.txt 2026-04-08T06:49:50,140 reading manifest file 'ecell4.egg-info/SOURCES.txt' 2026-04-08T06:49:50,145 reading manifest template 'MANIFEST.in' 2026-04-08T06:49:50,146 adding license file 'LICENSE' 2026-04-08T06:49:50,151 writing manifest file 'ecell4.egg-info/SOURCES.txt' 2026-04-08T06:49:50,153 Copying ecell4.egg-info to build/bdist.linux-armv7l/wheel/./ecell4-1.2.2-py3.11.egg-info 2026-04-08T06:49:50,163 running install_scripts 2026-04-08T06:49:50,176 creating build/bdist.linux-armv7l/wheel/ecell4-1.2.2.dist-info/WHEEL 2026-04-08T06:49:50,179 creating '/tmp/pip-wheel-kdn3pndq/ecell4-1.2.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-04-08T06:49:50,181 adding 'ecell4/__init__.py' 2026-04-08T06:49:50,182 adding 'ecell4/prelude.py' 2026-04-08T06:49:50,184 adding 'ecell4/datasource/__init__.py' 2026-04-08T06:49:50,186 adding 'ecell4/datasource/biocyc.py' 2026-04-08T06:49:50,188 adding 'ecell4/datasource/biogrid.py' 2026-04-08T06:49:50,189 adding 'ecell4/datasource/ecocyc.py' 2026-04-08T06:49:50,191 adding 'ecell4/datasource/pdb.py' 2026-04-08T06:49:50,193 adding 'ecell4/datasource/psicquic.py' 2026-04-08T06:49:50,195 adding 'ecell4/datasource/pubmed.py' 2026-04-08T06:49:50,196 adding 'ecell4/datasource/rdf.py' 2026-04-08T06:49:50,198 adding 'ecell4/datasource/sbml.py' 2026-04-08T06:49:50,200 adding 'ecell4/datasource/sparql.py' 2026-04-08T06:49:50,201 adding 'ecell4/datasource/string.py' 2026-04-08T06:49:50,203 adding 'ecell4/datasource/uniprot.py' 2026-04-08T06:49:50,205 adding 'ecell4/extra/__init__.py' 2026-04-08T06:49:50,207 adding 'ecell4/extra/_pysb.py' 2026-04-08T06:49:50,209 adding 'ecell4/extra/_unit.py' 2026-04-08T06:49:50,213 adding 'ecell4/extra/azure_batch.py' 2026-04-08T06:49:50,215 adding 'ecell4/extra/bdml.py' 2026-04-08T06:49:50,217 adding 'ecell4/extra/ensemble.py' 2026-04-08T06:49:50,219 adding 'ecell4/extra/latex.py' 2026-04-08T06:49:50,221 adding 'ecell4/extra/sge.py' 2026-04-08T06:49:50,222 adding 'ecell4/extra/slurm.py' 2026-04-08T06:49:50,224 adding 'ecell4/extra/unit.py' 2026-04-08T06:49:50,225 adding 'ecell4/extra/unit_checker.py' 2026-04-08T06:49:50,227 adding 'ecell4/extra/vtkview.py' 2026-04-08T06:49:50,229 adding 'ecell4/mca/__init__.py' 2026-04-08T06:49:50,231 adding 'ecell4/mca/cc.py' 2026-04-08T06:49:50,232 adding 'ecell4/mca/network.py' 2026-04-08T06:49:50,235 adding 'ecell4/plotting/__init__.py' 2026-04-08T06:49:50,237 adding 'ecell4/plotting/_core.py' 2026-04-08T06:49:50,239 adding 'ecell4/plotting/_elegans.py' 2026-04-08T06:49:50,243 adding 'ecell4/plotting/_matplotlib.py' 2026-04-08T06:49:50,245 adding 'ecell4/plotting/_plotly.py' 2026-04-08T06:49:50,246 adding 'ecell4/plotting/styles.py' 2026-04-08T06:49:50,248 adding 'ecell4/util/__init__.py' 2026-04-08T06:49:50,250 adding 'ecell4/util/cyjs.py' 2026-04-08T06:49:50,251 adding 'ecell4/util/decorator.py' 2026-04-08T06:49:50,253 adding 'ecell4/util/decorator_base.py' 2026-04-08T06:49:50,254 adding 'ecell4/util/logger.py' 2026-04-08T06:49:50,256 adding 'ecell4/util/model_parser.py' 2026-04-08T06:49:50,259 adding 'ecell4/util/parseobj.py' 2026-04-08T06:49:50,261 adding 'ecell4/util/ports.py' 2026-04-08T06:49:50,263 adding 'ecell4/util/progressbar.py' 2026-04-08T06:49:50,265 adding 'ecell4/util/session.py' 2026-04-08T06:49:50,267 adding 'ecell4/util/show.py' 2026-04-08T06:49:50,269 adding 'ecell4/util/simulation.py' 2026-04-08T06:49:50,270 adding 'ecell4/util/viz.py' 2026-04-08T06:49:50,272 adding 'ecell4/util/templates/init_cyjs.js' 2026-04-08T06:49:50,273 adding 'ecell4/util/templates/movie.tmpl' 2026-04-08T06:49:50,275 adding 'ecell4/util/templates/nya.tmpl' 2026-04-08T06:49:50,276 adding 'ecell4/util/templates/particles.tmpl' 2026-04-08T06:49:50,277 adding 'ecell4/util/templates/template.html' 2026-04-08T06:49:50,279 adding 'ecell4/util/templates/ecelllogo/logo01.png' 2026-04-08T06:49:50,281 adding 'ecell4/util/templates/ecelllogo/logo02.png' 2026-04-08T06:49:50,282 adding 'ecell4/util/templates/ecelllogo/logo03.png' 2026-04-08T06:49:50,284 adding 'ecell4/util/templates/ecelllogo/logo04.png' 2026-04-08T06:49:50,285 adding 'ecell4/util/templates/ecelllogo/logo05.png' 2026-04-08T06:49:50,287 adding 'ecell4/util/templates/ecelllogo/logo06.png' 2026-04-08T06:49:50,288 adding 'ecell4/util/templates/ecelllogo/logo07.png' 2026-04-08T06:49:50,289 adding 'ecell4/util/templates/ecelllogo/logo08.png' 2026-04-08T06:49:50,291 adding 'ecell4/util/templates/ecelllogo/logo09.png' 2026-04-08T06:49:50,292 adding 'ecell4/util/templates/ecelllogo/logo10.png' 2026-04-08T06:49:50,294 adding 'ecell4/util/templates/ecelllogo/logo11.png' 2026-04-08T06:49:50,295 adding 'ecell4/util/templates/ecelllogo/logo12.png' 2026-04-08T06:49:50,297 adding 'ecell4/util/templates/ecelllogo/logo13.png' 2026-04-08T06:49:50,298 adding 'ecell4/util/templates/ecelllogo/logo14.png' 2026-04-08T06:49:50,300 adding 'ecell4/util/templates/ecelllogo/logo15.png' 2026-04-08T06:49:50,307 adding 'ecell4-1.2.2.dist-info/licenses/LICENSE' 2026-04-08T06:49:50,309 adding 'ecell4-1.2.2.dist-info/METADATA' 2026-04-08T06:49:50,309 adding 'ecell4-1.2.2.dist-info/WHEEL' 2026-04-08T06:49:50,310 adding 'ecell4-1.2.2.dist-info/top_level.txt' 2026-04-08T06:49:50,312 adding 'ecell4-1.2.2.dist-info/RECORD' 2026-04-08T06:49:50,316 removing build/bdist.linux-armv7l/wheel 2026-04-08T06:49:50,445 Building wheel for ecell4 (setup.py): finished with status 'done' 2026-04-08T06:49:50,450 Created wheel for ecell4: filename=ecell4-1.2.2-py3-none-any.whl size=161885 sha256=eca62102611abcdf600816c159c83ae410f821eaa11e554151bb80c9147b3bd5 2026-04-08T06:49:50,451 Stored in directory: /tmp/pip-ephem-wheel-cache-dqlegobv/wheels/9b/e3/44/6689f62ca21c60d13ea659dc08f9198110e6d539084274380f 2026-04-08T06:49:50,464 Successfully built ecell4 2026-04-08T06:49:50,473 Removed build tracker: '/tmp/pip-build-tracker-o2dgsyor'