2026-04-08T16:57:29,823 Created temporary directory: /tmp/pip-ephem-wheel-cache-s78l3wom 2026-04-08T16:57:29,825 Created temporary directory: /tmp/pip-build-tracker-g9cawhqj 2026-04-08T16:57:29,825 Initialized build tracking at /tmp/pip-build-tracker-g9cawhqj 2026-04-08T16:57:29,826 Created build tracker: /tmp/pip-build-tracker-g9cawhqj 2026-04-08T16:57:29,826 Entered build tracker: /tmp/pip-build-tracker-g9cawhqj 2026-04-08T16:57:29,827 Created temporary directory: /tmp/pip-wheel-jhdh9e_p 2026-04-08T16:57:29,830 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-08T16:57:29,832 Created temporary directory: /tmp/pip-ephem-wheel-cache-blvcuar6 2026-04-08T16:57:29,854 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-08T16:57:29,858 2 location(s) to search for versions of em-map-utils: 2026-04-08T16:57:29,858 * https://pypi.org/simple/em-map-utils/ 2026-04-08T16:57:29,858 * https://www.piwheels.org/simple/em-map-utils/ 2026-04-08T16:57:29,859 Fetching project page and analyzing links: https://pypi.org/simple/em-map-utils/ 2026-04-08T16:57:29,859 Getting page https://pypi.org/simple/em-map-utils/ 2026-04-08T16:57:29,861 Found index url https://pypi.org/simple 2026-04-08T16:57:30,088 Fetched page https://pypi.org/simple/em-map-utils/ as application/vnd.pypi.simple.v1+json 2026-04-08T16:57:30,090 Found link https://files.pythonhosted.org/packages/42/f1/eff45b58b2de6c53ef67a7cc199fbc57386dbf17647ab19dd7f14a85c66d/em-map-utils-0.0.1.tar.gz (from https://pypi.org/simple/em-map-utils/), version: 0.0.1 2026-04-08T16:57:30,091 Found link https://files.pythonhosted.org/packages/c0/3e/e00d1d957b02d90907216fb660c7a478899708a136608ebaad9664d7298d/em_map_utils-0.0.2.tar.gz (from https://pypi.org/simple/em-map-utils/), version: 0.0.2 2026-04-08T16:57:30,092 Found link https://files.pythonhosted.org/packages/3b/b0/91d307c6c538ae22fc55e66ae13b82741eb1a8018d53327e928a31af221e/em_map_utils-0.0.3.tar.gz (from https://pypi.org/simple/em-map-utils/), version: 0.0.3 2026-04-08T16:57:30,092 Found link https://files.pythonhosted.org/packages/8b/e3/b11837877faccbfe400ec6191b285ddbea0c7d404640f21cf057972ae08f/em_map_utils-0.1.0.tar.gz (from https://pypi.org/simple/em-map-utils/), version: 0.1.0 2026-04-08T16:57:30,093 Fetching project page and analyzing links: https://www.piwheels.org/simple/em-map-utils/ 2026-04-08T16:57:30,094 Getting page https://www.piwheels.org/simple/em-map-utils/ 2026-04-08T16:57:30,095 Found index url https://www.piwheels.org/simple 2026-04-08T16:57:30,273 Fetched page https://www.piwheels.org/simple/em-map-utils/ as text/html 2026-04-08T16:57:30,276 Skipping link: No binaries permitted for em-map-utils: https://archive1.piwheels.org/simple/em-map-utils/em_map_utils-0.0.3-py3-none-any.whl#sha256=5feeb4f99075678a3043c6ee84242da09405c9a0dee7d8518139e1e6285ba73a (from https://www.piwheels.org/simple/em-map-utils/) 2026-04-08T16:57:30,276 Skipping link: No binaries permitted for em-map-utils: https://archive1.piwheels.org/simple/em-map-utils/em_map_utils-0.0.2-py3-none-any.whl#sha256=ecf32fa6855e6f6b416655f375faa7a832de46b8a2c48308a09d36b2b4764a77 (from https://www.piwheels.org/simple/em-map-utils/) 2026-04-08T16:57:30,277 Skipping link: No binaries permitted for em-map-utils: https://archive1.piwheels.org/simple/em-map-utils/em_map_utils-0.0.1-py3-none-any.whl#sha256=9b152cb62d91b370b8c57dd83c32e1a402a1d19f2711e7c622938e5a7c30f208 (from https://www.piwheels.org/simple/em-map-utils/) 2026-04-08T16:57:30,277 Skipping link: not a file: https://www.piwheels.org/simple/em-map-utils/ 2026-04-08T16:57:30,278 Skipping link: not a file: https://pypi.org/simple/em-map-utils/ 2026-04-08T16:57:30,299 Given no hashes to check 1 links for project 'em-map-utils': discarding no candidates 2026-04-08T16:57:30,318 Collecting em-map-utils==0.1.0 2026-04-08T16:57:30,321 Created temporary directory: /tmp/pip-unpack-23uet7in 2026-04-08T16:57:30,552 Downloading em_map_utils-0.1.0.tar.gz (33 kB) 2026-04-08T16:57:30,624 Added em-map-utils==0.1.0 from https://files.pythonhosted.org/packages/8b/e3/b11837877faccbfe400ec6191b285ddbea0c7d404640f21cf057972ae08f/em_map_utils-0.1.0.tar.gz to build tracker '/tmp/pip-build-tracker-g9cawhqj' 2026-04-08T16:57:30,625 Running setup.py (path:/tmp/pip-wheel-jhdh9e_p/em-map-utils_fece99d1103c447aacc4bd46a1da8749/setup.py) egg_info for package em-map-utils 2026-04-08T16:57:30,626 Created temporary directory: /tmp/pip-pip-egg-info-avtz3074 2026-04-08T16:57:30,627 Preparing metadata (setup.py): started 2026-04-08T16:57:30,628 Running command python setup.py egg_info 2026-04-08T16:57:31,551 running egg_info 2026-04-08T16:57:31,579 creating /tmp/pip-pip-egg-info-avtz3074/em_map_utils.egg-info 2026-04-08T16:57:31,580 writing /tmp/pip-pip-egg-info-avtz3074/em_map_utils.egg-info/PKG-INFO 2026-04-08T16:57:31,583 writing dependency_links to /tmp/pip-pip-egg-info-avtz3074/em_map_utils.egg-info/dependency_links.txt 2026-04-08T16:57:31,585 writing top-level names to /tmp/pip-pip-egg-info-avtz3074/em_map_utils.egg-info/top_level.txt 2026-04-08T16:57:31,587 writing manifest file '/tmp/pip-pip-egg-info-avtz3074/em_map_utils.egg-info/SOURCES.txt' 2026-04-08T16:57:31,679 reading manifest file '/tmp/pip-pip-egg-info-avtz3074/em_map_utils.egg-info/SOURCES.txt' 2026-04-08T16:57:31,680 reading manifest template 'MANIFEST.in' 2026-04-08T16:57:31,682 warning: no files found matching '*.py' under directory 'em-map-utils' 2026-04-08T16:57:31,683 adding license file 'LICENSE' 2026-04-08T16:57:31,685 writing manifest file '/tmp/pip-pip-egg-info-avtz3074/em_map_utils.egg-info/SOURCES.txt' 2026-04-08T16:57:31,793 Preparing metadata (setup.py): finished with status 'done' 2026-04-08T16:57:31,797 Source in /tmp/pip-wheel-jhdh9e_p/em-map-utils_fece99d1103c447aacc4bd46a1da8749 has version 0.1.0, which satisfies requirement em-map-utils==0.1.0 from https://files.pythonhosted.org/packages/8b/e3/b11837877faccbfe400ec6191b285ddbea0c7d404640f21cf057972ae08f/em_map_utils-0.1.0.tar.gz 2026-04-08T16:57:31,798 Removed em-map-utils==0.1.0 from https://files.pythonhosted.org/packages/8b/e3/b11837877faccbfe400ec6191b285ddbea0c7d404640f21cf057972ae08f/em_map_utils-0.1.0.tar.gz from build tracker '/tmp/pip-build-tracker-g9cawhqj' 2026-04-08T16:57:31,803 Created temporary directory: /tmp/pip-unpack-6f8dbwh2 2026-04-08T16:57:31,803 Building wheels for collected packages: em-map-utils 2026-04-08T16:57:31,808 Created temporary directory: /tmp/pip-wheel-ytqqki7u 2026-04-08T16:57:31,809 Building wheel for em-map-utils (setup.py): started 2026-04-08T16:57:31,810 Destination directory: /tmp/pip-wheel-ytqqki7u 2026-04-08T16:57:31,810 Running command python setup.py bdist_wheel 2026-04-08T16:57:32,658 running bdist_wheel 2026-04-08T16:57:32,791 running build 2026-04-08T16:57:32,792 running build_py 2026-04-08T16:57:32,825 creating build/lib/em_map_utils 2026-04-08T16:57:32,827 copying em_map_utils/structure_size_and_shape.py -> build/lib/em_map_utils 2026-04-08T16:57:32,830 copying em_map_utils/map_threshold.py -> build/lib/em_map_utils 2026-04-08T16:57:32,832 copying em_map_utils/map_line_projections.py -> build/lib/em_map_utils 2026-04-08T16:57:32,834 copying em_map_utils/filled_sphere.py -> build/lib/em_map_utils 2026-04-08T16:57:32,836 copying em_map_utils/filled_cylinder.py -> build/lib/em_map_utils 2026-04-08T16:57:32,839 copying em_map_utils/filled_cuboid.py -> build/lib/em_map_utils 2026-04-08T16:57:32,840 copying em_map_utils/__init__.py -> build/lib/em_map_utils 2026-04-08T16:57:32,842 copying em_map_utils/map_resample.py -> build/lib/em_map_utils 2026-04-08T16:57:32,844 copying em_map_utils/map_rotate.py -> build/lib/em_map_utils 2026-04-08T16:57:32,848 copying em_map_utils/download_emdb.py -> build/lib/em_map_utils 2026-04-08T16:57:32,850 copying em_map_utils/map_covariance.py -> build/lib/em_map_utils 2026-04-08T16:57:32,852 copying em_map_utils/farm_function.py -> build/lib/em_map_utils 2026-04-08T16:57:32,855 copying em_map_utils/util.py -> build/lib/em_map_utils 2026-04-08T16:57:32,857 creating build/lib/em_map_utils/demos 2026-04-08T16:57:32,858 copying em_map_utils/demos/demo_filled_cuboid.py -> build/lib/em_map_utils/demos 2026-04-08T16:57:32,860 copying em_map_utils/demos/demo_farm_function.py -> build/lib/em_map_utils/demos 2026-04-08T16:57:32,862 copying em_map_utils/demos/demo_map_covariance.py -> build/lib/em_map_utils/demos 2026-04-08T16:57:32,864 copying em_map_utils/demos/demo_map_line_projections.py -> build/lib/em_map_utils/demos 2026-04-08T16:57:32,866 copying em_map_utils/demos/demo_map_rotate.py -> build/lib/em_map_utils/demos 2026-04-08T16:57:32,867 copying em_map_utils/demos/__init__.py -> build/lib/em_map_utils/demos 2026-04-08T16:57:32,869 copying em_map_utils/demos/demo_map_resample.py -> build/lib/em_map_utils/demos 2026-04-08T16:57:32,871 copying em_map_utils/demos/demo_filled_cylinder.py -> build/lib/em_map_utils/demos 2026-04-08T16:57:32,873 copying em_map_utils/demos/ortho_surface_views.py -> build/lib/em_map_utils/demos 2026-04-08T16:57:32,875 copying em_map_utils/demos/demo_filled_sphere.py -> build/lib/em_map_utils/demos 2026-04-08T16:57:32,906 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2026-04-08T16:57:32,907 !! 2026-04-08T16:57:32,908 ******************************************************************************** 2026-04-08T16:57:32,908 Please avoid running ``setup.py`` directly. 2026-04-08T16:57:32,909 Instead, use pypa/build, pypa/installer or other 2026-04-08T16:57:32,909 standards-based tools. 2026-04-08T16:57:32,910 This deprecation is overdue, please update your project and remove deprecated 2026-04-08T16:57:32,911 calls to avoid build errors in the future. 2026-04-08T16:57:32,912 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2026-04-08T16:57:32,912 ******************************************************************************** 2026-04-08T16:57:32,913 !! 2026-04-08T16:57:32,914 self.initialize_options() 2026-04-08T16:57:32,935 installing to build/bdist.linux-armv7l/wheel 2026-04-08T16:57:32,935 running install 2026-04-08T16:57:32,960 running install_lib 2026-04-08T16:57:32,986 creating build/bdist.linux-armv7l/wheel 2026-04-08T16:57:32,988 creating build/bdist.linux-armv7l/wheel/em_map_utils 2026-04-08T16:57:32,990 copying build/lib/em_map_utils/structure_size_and_shape.py -> build/bdist.linux-armv7l/wheel/./em_map_utils 2026-04-08T16:57:32,992 copying build/lib/em_map_utils/map_threshold.py -> build/bdist.linux-armv7l/wheel/./em_map_utils 2026-04-08T16:57:32,994 copying build/lib/em_map_utils/map_line_projections.py -> build/bdist.linux-armv7l/wheel/./em_map_utils 2026-04-08T16:57:32,996 copying build/lib/em_map_utils/filled_sphere.py -> build/bdist.linux-armv7l/wheel/./em_map_utils 2026-04-08T16:57:32,998 copying build/lib/em_map_utils/filled_cylinder.py -> build/bdist.linux-armv7l/wheel/./em_map_utils 2026-04-08T16:57:33,000 copying build/lib/em_map_utils/filled_cuboid.py -> build/bdist.linux-armv7l/wheel/./em_map_utils 2026-04-08T16:57:33,002 copying build/lib/em_map_utils/__init__.py -> build/bdist.linux-armv7l/wheel/./em_map_utils 2026-04-08T16:57:33,004 copying build/lib/em_map_utils/map_resample.py -> build/bdist.linux-armv7l/wheel/./em_map_utils 2026-04-08T16:57:33,006 copying build/lib/em_map_utils/map_rotate.py -> build/bdist.linux-armv7l/wheel/./em_map_utils 2026-04-08T16:57:33,008 copying build/lib/em_map_utils/download_emdb.py -> build/bdist.linux-armv7l/wheel/./em_map_utils 2026-04-08T16:57:33,010 copying build/lib/em_map_utils/map_covariance.py -> build/bdist.linux-armv7l/wheel/./em_map_utils 2026-04-08T16:57:33,012 copying build/lib/em_map_utils/farm_function.py -> build/bdist.linux-armv7l/wheel/./em_map_utils 2026-04-08T16:57:33,015 copying build/lib/em_map_utils/util.py -> build/bdist.linux-armv7l/wheel/./em_map_utils 2026-04-08T16:57:33,017 creating build/bdist.linux-armv7l/wheel/em_map_utils/demos 2026-04-08T16:57:33,018 copying build/lib/em_map_utils/demos/demo_filled_cuboid.py -> build/bdist.linux-armv7l/wheel/./em_map_utils/demos 2026-04-08T16:57:33,020 copying build/lib/em_map_utils/demos/demo_farm_function.py -> build/bdist.linux-armv7l/wheel/./em_map_utils/demos 2026-04-08T16:57:33,022 copying build/lib/em_map_utils/demos/demo_map_covariance.py -> build/bdist.linux-armv7l/wheel/./em_map_utils/demos 2026-04-08T16:57:33,024 copying build/lib/em_map_utils/demos/demo_map_line_projections.py -> build/bdist.linux-armv7l/wheel/./em_map_utils/demos 2026-04-08T16:57:33,025 copying build/lib/em_map_utils/demos/demo_map_rotate.py -> build/bdist.linux-armv7l/wheel/./em_map_utils/demos 2026-04-08T16:57:33,027 copying build/lib/em_map_utils/demos/__init__.py -> build/bdist.linux-armv7l/wheel/./em_map_utils/demos 2026-04-08T16:57:33,029 copying build/lib/em_map_utils/demos/demo_map_resample.py -> build/bdist.linux-armv7l/wheel/./em_map_utils/demos 2026-04-08T16:57:33,031 copying build/lib/em_map_utils/demos/demo_filled_cylinder.py -> build/bdist.linux-armv7l/wheel/./em_map_utils/demos 2026-04-08T16:57:33,033 copying build/lib/em_map_utils/demos/ortho_surface_views.py -> build/bdist.linux-armv7l/wheel/./em_map_utils/demos 2026-04-08T16:57:33,035 copying build/lib/em_map_utils/demos/demo_filled_sphere.py -> build/bdist.linux-armv7l/wheel/./em_map_utils/demos 2026-04-08T16:57:33,036 running install_egg_info 2026-04-08T16:57:33,071 running egg_info 2026-04-08T16:57:33,097 writing em_map_utils.egg-info/PKG-INFO 2026-04-08T16:57:33,100 writing dependency_links to em_map_utils.egg-info/dependency_links.txt 2026-04-08T16:57:33,102 writing top-level names to em_map_utils.egg-info/top_level.txt 2026-04-08T16:57:33,134 reading manifest file 'em_map_utils.egg-info/SOURCES.txt' 2026-04-08T16:57:33,137 reading manifest template 'MANIFEST.in' 2026-04-08T16:57:33,138 warning: no files found matching '*.py' under directory 'em-map-utils' 2026-04-08T16:57:33,139 adding license file 'LICENSE' 2026-04-08T16:57:33,142 writing manifest file 'em_map_utils.egg-info/SOURCES.txt' 2026-04-08T16:57:33,143 Copying em_map_utils.egg-info to build/bdist.linux-armv7l/wheel/./em_map_utils-0.1.0-py3.11.egg-info 2026-04-08T16:57:33,151 running install_scripts 2026-04-08T16:57:33,163 creating build/bdist.linux-armv7l/wheel/em_map_utils-0.1.0.dist-info/WHEEL 2026-04-08T16:57:33,165 creating '/tmp/pip-wheel-ytqqki7u/em_map_utils-0.1.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-04-08T16:57:33,168 adding 'em_map_utils/__init__.py' 2026-04-08T16:57:33,170 adding 'em_map_utils/download_emdb.py' 2026-04-08T16:57:33,172 adding 'em_map_utils/farm_function.py' 2026-04-08T16:57:33,174 adding 'em_map_utils/filled_cuboid.py' 2026-04-08T16:57:33,175 adding 'em_map_utils/filled_cylinder.py' 2026-04-08T16:57:33,177 adding 'em_map_utils/filled_sphere.py' 2026-04-08T16:57:33,179 adding 'em_map_utils/map_covariance.py' 2026-04-08T16:57:33,181 adding 'em_map_utils/map_line_projections.py' 2026-04-08T16:57:33,182 adding 'em_map_utils/map_resample.py' 2026-04-08T16:57:33,184 adding 'em_map_utils/map_rotate.py' 2026-04-08T16:57:33,186 adding 'em_map_utils/map_threshold.py' 2026-04-08T16:57:33,188 adding 'em_map_utils/structure_size_and_shape.py' 2026-04-08T16:57:33,189 adding 'em_map_utils/util.py' 2026-04-08T16:57:33,191 adding 'em_map_utils/demos/__init__.py' 2026-04-08T16:57:33,193 adding 'em_map_utils/demos/demo_farm_function.py' 2026-04-08T16:57:33,194 adding 'em_map_utils/demos/demo_filled_cuboid.py' 2026-04-08T16:57:33,195 adding 'em_map_utils/demos/demo_filled_cylinder.py' 2026-04-08T16:57:33,196 adding 'em_map_utils/demos/demo_filled_sphere.py' 2026-04-08T16:57:33,198 adding 'em_map_utils/demos/demo_map_covariance.py' 2026-04-08T16:57:33,199 adding 'em_map_utils/demos/demo_map_line_projections.py' 2026-04-08T16:57:33,201 adding 'em_map_utils/demos/demo_map_resample.py' 2026-04-08T16:57:33,202 adding 'em_map_utils/demos/demo_map_rotate.py' 2026-04-08T16:57:33,203 adding 'em_map_utils/demos/ortho_surface_views.py' 2026-04-08T16:57:33,206 adding 'em_map_utils-0.1.0.dist-info/licenses/LICENSE' 2026-04-08T16:57:33,208 adding 'em_map_utils-0.1.0.dist-info/METADATA' 2026-04-08T16:57:33,209 adding 'em_map_utils-0.1.0.dist-info/WHEEL' 2026-04-08T16:57:33,210 adding 'em_map_utils-0.1.0.dist-info/top_level.txt' 2026-04-08T16:57:33,211 adding 'em_map_utils-0.1.0.dist-info/RECORD' 2026-04-08T16:57:33,213 removing build/bdist.linux-armv7l/wheel 2026-04-08T16:57:33,332 Building wheel for em-map-utils (setup.py): finished with status 'done' 2026-04-08T16:57:33,335 Created wheel for em-map-utils: filename=em_map_utils-0.1.0-py3-none-any.whl size=47062 sha256=eb0c96b29e116526e528f73231fa80e3e09b08968b9de78fc11564a5ce8d41b2 2026-04-08T16:57:33,336 Stored in directory: /tmp/pip-ephem-wheel-cache-blvcuar6/wheels/da/ef/ba/54e2d88ecb808aac3be3cc10a276dd85bd148052eabaabe946 2026-04-08T16:57:33,346 Successfully built em-map-utils 2026-04-08T16:57:33,351 Removed build tracker: '/tmp/pip-build-tracker-g9cawhqj'