2026-04-08T18:07:57,237 Created temporary directory: /tmp/pip-ephem-wheel-cache-xjnh9afk 2026-04-08T18:07:57,239 Created temporary directory: /tmp/pip-build-tracker-dqmo00wx 2026-04-08T18:07:57,239 Initialized build tracking at /tmp/pip-build-tracker-dqmo00wx 2026-04-08T18:07:57,240 Created build tracker: /tmp/pip-build-tracker-dqmo00wx 2026-04-08T18:07:57,240 Entered build tracker: /tmp/pip-build-tracker-dqmo00wx 2026-04-08T18:07:57,241 Created temporary directory: /tmp/pip-wheel-pjd2rrag 2026-04-08T18:07:57,244 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-08T18:07:57,246 Created temporary directory: /tmp/pip-ephem-wheel-cache-mgbfj_8o 2026-04-08T18:07:57,268 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-08T18:07:57,271 2 location(s) to search for versions of python-javabridge: 2026-04-08T18:07:57,271 * https://pypi.org/simple/python-javabridge/ 2026-04-08T18:07:57,271 * https://www.piwheels.org/simple/python-javabridge/ 2026-04-08T18:07:57,272 Fetching project page and analyzing links: https://pypi.org/simple/python-javabridge/ 2026-04-08T18:07:57,273 Getting page https://pypi.org/simple/python-javabridge/ 2026-04-08T18:07:57,274 Found index url https://pypi.org/simple 2026-04-08T18:07:57,506 Fetched page https://pypi.org/simple/python-javabridge/ as application/vnd.pypi.simple.v1+json 2026-04-08T18:07:57,509 Found link https://files.pythonhosted.org/packages/58/5c/bfcc52002c9dfe5fe3bd067783243ab0130f59f757b0517f62f1ba7e88ea/python-javabridge-4.0.0.tar.gz (from https://pypi.org/simple/python-javabridge/), version: 4.0.0 2026-04-08T18:07:57,510 Skipping link: No binaries permitted for python-javabridge: https://files.pythonhosted.org/packages/21/52/7d9737c905264061f45e81ce57f6532c9e46462f0093beed4d4d72928600/python_javabridge-4.0.0-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/python-javabridge/) 2026-04-08T18:07:57,510 Found link https://files.pythonhosted.org/packages/0e/52/b444f826f4148cc741755a6b6adbd1707c01864e45359b8fdf3f67c71ebc/python-javabridge-4.0.1.tar.gz (from https://pypi.org/simple/python-javabridge/), version: 4.0.1 2026-04-08T18:07:57,511 Found link https://files.pythonhosted.org/packages/8c/c1/e553ceb6e71e0112d125d5a451390dc7df42962c1f67147a4c1d5b1938f9/python-javabridge-4.0.2.tar.gz (from https://pypi.org/simple/python-javabridge/), version: 4.0.2 2026-04-08T18:07:57,512 Found link https://files.pythonhosted.org/packages/5e/d5/78f75ee0a6beb51a606c50cc17d8f99782653f04dce6d5e12feaef089692/python-javabridge-4.0.3.tar.gz (from https://pypi.org/simple/python-javabridge/), version: 4.0.3 2026-04-08T18:07:57,513 Skipping link: No binaries permitted for python-javabridge: https://files.pythonhosted.org/packages/63/e1/ec42c900455f9c7f076aca2cbc9a8171b337d9a301e64e858b7878721dd0/python_javabridge-4.0.3-cp39-cp39-macosx_10_19_x86_64.whl (from https://pypi.org/simple/python-javabridge/) 2026-04-08T18:07:57,513 Skipping link: No binaries permitted for python-javabridge: https://files.pythonhosted.org/packages/f3/02/95ac8d771b4b607d6e2dd65c12cbb8dd627ae8e9aba0668ac4d34da0bed4/python_javabridge-4.0.3-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/python-javabridge/) 2026-04-08T18:07:57,514 Found link https://files.pythonhosted.org/packages/5b/e2/3bf9afe20d16ea603c67de9d1af1be2eafeaf15c9c11e65770fd17ccd28e/python_javabridge-4.0.4.tar.gz (from https://pypi.org/simple/python-javabridge/), version: 4.0.4 2026-04-08T18:07:57,515 Skipping link: No binaries permitted for python-javabridge: https://files.pythonhosted.org/packages/50/01/01c1854a416353ca614230f18a4ebc820d90131092d69725419f9d98a0d9/python_javabridge-4.0.5-cp39-cp39-macosx_10_13_x86_64.whl (from https://pypi.org/simple/python-javabridge/) 2026-04-08T18:07:57,515 Found link https://files.pythonhosted.org/packages/d4/8b/6e3fe46376fd2053004aeee97825e82c21dd52f662073c93eea3ef8552da/python_javabridge-4.0.5.tar.gz (from https://pypi.org/simple/python-javabridge/), version: 4.0.5 2026-04-08T18:07:57,516 Fetching project page and analyzing links: https://www.piwheels.org/simple/python-javabridge/ 2026-04-08T18:07:57,517 Getting page https://www.piwheels.org/simple/python-javabridge/ 2026-04-08T18:07:57,518 Found index url https://www.piwheels.org/simple 2026-04-08T18:07:57,694 Fetched page https://www.piwheels.org/simple/python-javabridge/ as text/html 2026-04-08T18:07:57,696 Skipping link: not a file: https://www.piwheels.org/simple/python-javabridge/ 2026-04-08T18:07:57,696 Skipping link: not a file: https://pypi.org/simple/python-javabridge/ 2026-04-08T18:07:57,717 Given no hashes to check 1 links for project 'python-javabridge': discarding no candidates 2026-04-08T18:07:57,737 Collecting python-javabridge==4.0.5 2026-04-08T18:07:57,739 Created temporary directory: /tmp/pip-unpack-dzkmv4rz 2026-04-08T18:07:57,979 Downloading python_javabridge-4.0.5.tar.gz (1.3 MB) 2026-04-08T18:07:58,378 Added python-javabridge==4.0.5 from https://files.pythonhosted.org/packages/d4/8b/6e3fe46376fd2053004aeee97825e82c21dd52f662073c93eea3ef8552da/python_javabridge-4.0.5.tar.gz to build tracker '/tmp/pip-build-tracker-dqmo00wx' 2026-04-08T18:07:58,383 Created temporary directory: /tmp/pip-build-env-92klvttw 2026-04-08T18:07:58,387 Installing build dependencies: started 2026-04-08T18:07:58,388 Running command pip subprocess to install build dependencies 2026-04-08T18:07:59,553 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-04-08T18:07:59,987 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-08T18:08:00,010 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-08T18:08:01,825 Collecting setuptools 2026-04-08T18:08:01,899 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-04-08T18:08:03,982 Collecting cython 2026-04-08T18:08:04,761 Using cached https://www.piwheels.org/simple/cython/cython-3.2.4-cp311-cp311-linux_armv7l.whl (11.1 MB) 2026-04-08T18:08:06,132 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/3a/be/650f9c091ef71cb01d735775d554e068752d3ff63d7943b26316dc401749/numpy-1.21.2.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2026-04-08T18:08:06,139 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/5f/d6/ad58ded26556eaeaa8c971e08b6466f17c4ac4d786cd3d800e26ce59cc01/numpy-1.21.3.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2026-04-08T18:08:06,146 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/fb/48/b0708ebd7718a8933f0d3937513ef8ef2f4f04529f1f66ca86d873043921/numpy-1.21.4.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2026-04-08T18:08:06,153 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/c2/a8/a924a09492bdfee8c2ec3094d0a13f2799800b4fdc9c890738aeeb12c72e/numpy-1.21.5.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2026-04-08T18:08:06,160 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/45/b7/de7b8e67f2232c26af57c205aaad29fe17754f793404f59c8a730c7a191a/numpy-1.21.6.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2026-04-08T18:08:07,079 Collecting numpy>=1.24.0 2026-04-08T18:08:08,037 Using cached https://www.piwheels.org/simple/numpy/numpy-2.4.4-cp311-cp311-linux_armv7l.whl (6.3 MB) 2026-04-08T18:08:11,323 Installing collected packages: setuptools, numpy, cython 2026-04-08T18:08:23,402 Creating /tmp/pip-build-env-92klvttw/overlay/local/bin 2026-04-08T18:08:23,405 changing mode of /tmp/pip-build-env-92klvttw/overlay/local/bin/f2py to 755 2026-04-08T18:08:23,407 changing mode of /tmp/pip-build-env-92klvttw/overlay/local/bin/numpy-config to 755 2026-04-08T18:08:27,356 changing mode of /tmp/pip-build-env-92klvttw/overlay/local/bin/cygdb to 755 2026-04-08T18:08:27,358 changing mode of /tmp/pip-build-env-92klvttw/overlay/local/bin/cython to 755 2026-04-08T18:08:27,361 changing mode of /tmp/pip-build-env-92klvttw/overlay/local/bin/cythonize to 755 2026-04-08T18:08:27,390 Successfully installed cython-3.2.4 numpy-2.4.4 setuptools-82.0.1 2026-04-08T18:08:27,852 Installing build dependencies: finished with status 'done' 2026-04-08T18:08:27,858 Getting requirements to build wheel: started 2026-04-08T18:08:27,860 Running command Getting requirements to build wheel 2026-04-08T18:08:28,634 Traceback (most recent call last): 2026-04-08T18:08:28,635 File "/usr/lib/python3/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 353, in 2026-04-08T18:08:28,635 main() 2026-04-08T18:08:28,636 File "/usr/lib/python3/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 335, in main 2026-04-08T18:08:28,636 json_out['return_val'] = hook(**hook_input['kwargs']) 2026-04-08T18:08:28,637 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2026-04-08T18:08:28,637 File "/usr/lib/python3/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 118, in get_requires_for_build_wheel 2026-04-08T18:08:28,638 return hook(config_settings) 2026-04-08T18:08:28,638 ^^^^^^^^^^^^^^^^^^^^^ 2026-04-08T18:08:28,639 File "/tmp/pip-build-env-92klvttw/overlay/local/lib/python3.11/dist-packages/setuptools/build_meta.py", line 333, in get_requires_for_build_wheel 2026-04-08T18:08:28,640 return self._get_build_requires(config_settings, requirements=[]) 2026-04-08T18:08:28,640 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2026-04-08T18:08:28,641 File "/tmp/pip-build-env-92klvttw/overlay/local/lib/python3.11/dist-packages/setuptools/build_meta.py", line 301, in _get_build_requires 2026-04-08T18:08:28,641 self.run_setup() 2026-04-08T18:08:28,642 File "/tmp/pip-build-env-92klvttw/overlay/local/lib/python3.11/dist-packages/setuptools/build_meta.py", line 317, in run_setup 2026-04-08T18:08:28,643 exec(code, locals()) 2026-04-08T18:08:28,644 File "", line 412, in 2026-04-08T18:08:28,645 File "", line 96, in ext_modules 2026-04-08T18:08:28,646 File "/tmp/pip-wheel-pjd2rrag/python-javabridge_d144ee735fb2455ead639fbe3e24d085/javabridge/locate.py", line 132, in find_javahome 2026-04-08T18:08:28,646 java_bin = get_out(["bash", "-c", "type -p java"]) 2026-04-08T18:08:28,647 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2026-04-08T18:08:28,648 File "/tmp/pip-wheel-pjd2rrag/python-javabridge_d144ee735fb2455ead639fbe3e24d085/javabridge/locate.py", line 129, in get_out 2026-04-08T18:08:28,648 raise Exception("Error finding javahome on linux: %s" % cmd) 2026-04-08T18:08:28,649 Exception: Error finding javahome on linux: ['bash', '-c', 'type -p java'] 2026-04-08T18:08:28,744 ERROR: [present-rich] Getting requirements to build wheel exited with 1 2026-04-08T18:08:28,757 [bold magenta]full command[/]: [blue]/usr/bin/python3 /usr/lib/python3/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py get_requires_for_build_wheel /tmp/tmpdyveb98e[/] 2026-04-08T18:08:28,758 [bold magenta]cwd[/]: /tmp/pip-wheel-pjd2rrag/python-javabridge_d144ee735fb2455ead639fbe3e24d085 2026-04-08T18:08:28,758 Getting requirements to build wheel: finished with status 'error' 2026-04-08T18:08:28,760 ERROR: [present-rich] Getting requirements to build wheel exited with 1 2026-04-08T18:08:28,766 Exception information: 2026-04-08T18:08:28,766 Traceback (most recent call last): 2026-04-08T18:08:28,766 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 160, in exc_logging_wrapper 2026-04-08T18:08:28,766 status = run_func(*args) 2026-04-08T18:08:28,766 ^^^^^^^^^^^^^^^ 2026-04-08T18:08:28,766 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 247, in wrapper 2026-04-08T18:08:28,766 return func(self, options, args) 2026-04-08T18:08:28,766 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2026-04-08T18:08:28,766 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 170, in run 2026-04-08T18:08:28,766 requirement_set = resolver.resolve(reqs, check_supported_wheels=True) 2026-04-08T18:08:28,766 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2026-04-08T18:08:28,766 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 92, in resolve 2026-04-08T18:08:28,766 result = self._result = resolver.resolve( 2026-04-08T18:08:28,766 ^^^^^^^^^^^^^^^^^ 2026-04-08T18:08:28,766 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 481, in resolve 2026-04-08T18:08:28,766 state = resolution.resolve(requirements, max_rounds=max_rounds) 2026-04-08T18:08:28,766 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2026-04-08T18:08:28,766 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 348, in resolve 2026-04-08T18:08:28,766 self._add_to_criteria(self.state.criteria, r, parent=None) 2026-04-08T18:08:28,766 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 172, in _add_to_criteria 2026-04-08T18:08:28,766 if not criterion.candidates: 2026-04-08T18:08:28,766 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/structs.py", line 151, in __bool__ 2026-04-08T18:08:28,766 return bool(self._sequence) 2026-04-08T18:08:28,766 ^^^^^^^^^^^^^^^^^^^^ 2026-04-08T18:08:28,766 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 155, in __bool__ 2026-04-08T18:08:28,766 return any(self) 2026-04-08T18:08:28,766 ^^^^^^^^^ 2026-04-08T18:08:28,766 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 143, in 2026-04-08T18:08:28,766 return (c for c in iterator if id(c) not in self._incompatible_ids) 2026-04-08T18:08:28,766 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2026-04-08T18:08:28,766 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 47, in _iter_built 2026-04-08T18:08:28,766 candidate = func() 2026-04-08T18:08:28,766 ^^^^^^ 2026-04-08T18:08:28,766 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 206, in _make_candidate_from_link 2026-04-08T18:08:28,766 self._link_candidate_cache[link] = LinkCandidate( 2026-04-08T18:08:28,766 ^^^^^^^^^^^^^^ 2026-04-08T18:08:28,766 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 297, in __init__ 2026-04-08T18:08:28,766 super().__init__( 2026-04-08T18:08:28,766 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 162, in __init__ 2026-04-08T18:08:28,766 self.dist = self._prepare() 2026-04-08T18:08:28,766 ^^^^^^^^^^^^^^^ 2026-04-08T18:08:28,766 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 231, in _prepare 2026-04-08T18:08:28,766 dist = self._prepare_distribution() 2026-04-08T18:08:28,766 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2026-04-08T18:08:28,766 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 308, in _prepare_distribution 2026-04-08T18:08:28,766 return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True) 2026-04-08T18:08:28,766 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2026-04-08T18:08:28,766 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 491, in prepare_linked_requirement 2026-04-08T18:08:28,766 return self._prepare_linked_requirement(req, parallel_builds) 2026-04-08T18:08:28,766 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2026-04-08T18:08:28,766 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 577, in _prepare_linked_requirement 2026-04-08T18:08:28,766 dist = _get_prepared_distribution( 2026-04-08T18:08:28,766 ^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2026-04-08T18:08:28,766 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 69, in _get_prepared_distribution 2026-04-08T18:08:28,766 abstract_dist.prepare_distribution_metadata( 2026-04-08T18:08:28,766 File "/usr/lib/python3/dist-packages/pip/_internal/distributions/sdist.py", line 48, in prepare_distribution_metadata 2026-04-08T18:08:28,766 self._install_build_reqs(finder) 2026-04-08T18:08:28,766 File "/usr/lib/python3/dist-packages/pip/_internal/distributions/sdist.py", line 118, in _install_build_reqs 2026-04-08T18:08:28,766 build_reqs = self._get_build_requires_wheel() 2026-04-08T18:08:28,766 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2026-04-08T18:08:28,766 File "/usr/lib/python3/dist-packages/pip/_internal/distributions/sdist.py", line 95, in _get_build_requires_wheel 2026-04-08T18:08:28,766 return backend.get_requires_for_build_wheel() 2026-04-08T18:08:28,766 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2026-04-08T18:08:28,766 File "/usr/lib/python3/dist-packages/pip/_internal/utils/misc.py", line 725, in get_requires_for_build_wheel 2026-04-08T18:08:28,766 return super().get_requires_for_build_wheel(config_settings=cs) 2026-04-08T18:08:28,766 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2026-04-08T18:08:28,766 File "/usr/lib/python3/dist-packages/pip/_vendor/pyproject_hooks/_impl.py", line 166, in get_requires_for_build_wheel 2026-04-08T18:08:28,766 return self._call_hook('get_requires_for_build_wheel', { 2026-04-08T18:08:28,766 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2026-04-08T18:08:28,766 File "/usr/lib/python3/dist-packages/pip/_vendor/pyproject_hooks/_impl.py", line 311, in _call_hook 2026-04-08T18:08:28,766 self._subprocess_runner( 2026-04-08T18:08:28,766 File "/usr/lib/python3/dist-packages/pip/_internal/utils/subprocess.py", line 252, in runner 2026-04-08T18:08:28,766 call_subprocess( 2026-04-08T18:08:28,766 File "/usr/lib/python3/dist-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess 2026-04-08T18:08:28,766 raise error 2026-04-08T18:08:28,766 pip._internal.exceptions.InstallationSubprocessError: Getting requirements to build wheel exited with 1 2026-04-08T18:08:28,778 Removed python-javabridge==4.0.5 from https://files.pythonhosted.org/packages/d4/8b/6e3fe46376fd2053004aeee97825e82c21dd52f662073c93eea3ef8552da/python_javabridge-4.0.5.tar.gz from build tracker '/tmp/pip-build-tracker-dqmo00wx' 2026-04-08T18:08:28,779 Removed build tracker: '/tmp/pip-build-tracker-dqmo00wx'