2026-04-09T06:36:42,563 Created temporary directory: /tmp/pip-ephem-wheel-cache-miipnn8l
2026-04-09T06:36:42,565 Created temporary directory: /tmp/pip-build-tracker-v2prknks
2026-04-09T06:36:42,565 Initialized build tracking at /tmp/pip-build-tracker-v2prknks
2026-04-09T06:36:42,566 Created build tracker: /tmp/pip-build-tracker-v2prknks
2026-04-09T06:36:42,566 Entered build tracker: /tmp/pip-build-tracker-v2prknks
2026-04-09T06:36:42,567 Created temporary directory: /tmp/pip-wheel-ad9hxa5n
2026-04-09T06:36:42,570 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-04-09T06:36:42,572 Created temporary directory: /tmp/pip-ephem-wheel-cache-z9kg095e
2026-04-09T06:36:42,597 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-04-09T06:36:42,600 2 location(s) to search for versions of appraise:
2026-04-09T06:36:42,600 * https://pypi.org/simple/appraise/
2026-04-09T06:36:42,600 * https://www.piwheels.org/simple/appraise/
2026-04-09T06:36:42,601 Fetching project page and analyzing links: https://pypi.org/simple/appraise/
2026-04-09T06:36:42,602 Getting page https://pypi.org/simple/appraise/
2026-04-09T06:36:42,603 Found index url https://pypi.org/simple
2026-04-09T06:36:42,827 Fetched page https://pypi.org/simple/appraise/ as application/vnd.pypi.simple.v1+json
2026-04-09T06:36:42,830   Skipping link: No binaries permitted for appraise: https://files.pythonhosted.org/packages/b0/ad/ae9310b242e8fd95235962625441ce6758a4c5d0768fe527caaf59bee6eb/appraise-1.2-py3-none-any.whl (from https://pypi.org/simple/appraise/)
2026-04-09T06:36:42,831   Found link https://files.pythonhosted.org/packages/21/c2/bbc41576968957db7187bf472e6b02883163fd50cbfd2701d84d4bedc768/appraise-1.2.tar.gz (from https://pypi.org/simple/appraise/), version: 1.2
2026-04-09T06:36:42,832   Skipping link: No binaries permitted for appraise: https://files.pythonhosted.org/packages/50/aa/e9bad73b02763ba2711053fafd55c6ca0649447efae9a8e22c8a7230032b/appraise-1.2.0.1-py3-none-any.whl (from https://pypi.org/simple/appraise/)
2026-04-09T06:36:42,833   Found link https://files.pythonhosted.org/packages/3c/ca/217a96dc1f3d45bef0a2891bda26e6d7102113fe7881ef3ca4b3c609e610/appraise-1.2.0.1.tar.gz (from https://pypi.org/simple/appraise/), version: 1.2.0.1
2026-04-09T06:36:42,833   Skipping link: No binaries permitted for appraise: https://files.pythonhosted.org/packages/ae/99/850a9358a003e15365cf57219d0cce98134b85d0ef07379500c4d44faae0/appraise-1.2.1-py3-none-any.whl (from https://pypi.org/simple/appraise/)
2026-04-09T06:36:42,834   Found link https://files.pythonhosted.org/packages/72/f0/9ba49740b6bdb4c92a5938fbd9c8f661b2f0ce0aa3d8bef860c3291bfdc5/appraise-1.2.1.tar.gz (from https://pypi.org/simple/appraise/), version: 1.2.1
2026-04-09T06:36:42,835   Skipping link: No binaries permitted for appraise: https://files.pythonhosted.org/packages/51/07/b43f1613b27acda7003c6d6c7f5a330d8e7913c501ec6d4443a27c7bdd58/appraise-1.2.2-py3-none-any.whl (from https://pypi.org/simple/appraise/)
2026-04-09T06:36:42,835   Found link https://files.pythonhosted.org/packages/6e/e0/0654bcd1cc1148c3104decc9714e5bd722f299e2d65e67b112c527044409/appraise-1.2.2.tar.gz (from https://pypi.org/simple/appraise/), version: 1.2.2
2026-04-09T06:36:42,836   Skipping link: No binaries permitted for appraise: https://files.pythonhosted.org/packages/9d/5e/f02c93be3955a10294d73f83a3fc73036e07ddd825f59aa921b4da991a45/appraise-1.2.3-py3-none-any.whl (from https://pypi.org/simple/appraise/)
2026-04-09T06:36:42,837   Found link https://files.pythonhosted.org/packages/8b/98/7d947ef9aa4d85de0192288b7f2099d6d907f721c7cb2d59ef41c4db6c2a/appraise-1.2.3.tar.gz (from https://pypi.org/simple/appraise/), version: 1.2.3
2026-04-09T06:36:42,838   Skipping link: No binaries permitted for appraise: https://files.pythonhosted.org/packages/32/41/0570b89090c89b506dfae0ab16de8cf6064caef12bf27fd533d4d356252a/appraise-1.2.4-py3-none-any.whl (from https://pypi.org/simple/appraise/)
2026-04-09T06:36:42,838   Found link https://files.pythonhosted.org/packages/b4/73/e2413cbdf4a408a9e59ee6272c59c6b25534888a7c115de4ecd15fb4eb8c/appraise-1.2.4.tar.gz (from https://pypi.org/simple/appraise/), version: 1.2.4
2026-04-09T06:36:42,839   Skipping link: No binaries permitted for appraise: https://files.pythonhosted.org/packages/55/13/7d26ad445674899668053c57e6142871aef76ab9e87c7f7e42437c20c892/appraise-1.2.5-py3-none-any.whl (from https://pypi.org/simple/appraise/)
2026-04-09T06:36:42,840   Found link https://files.pythonhosted.org/packages/3e/17/9aa8bc1b782b00d0046bfe6f20b51ac6ed0a58769414847d8f93eb190ac8/appraise-1.2.5.tar.gz (from https://pypi.org/simple/appraise/), version: 1.2.5
2026-04-09T06:36:42,840   Skipping link: No binaries permitted for appraise: https://files.pythonhosted.org/packages/2a/cc/ec28ba3841b15ea4cb12d4f6cbfd41ec80fb8bfdbd775ab7d487fc13ff67/appraise-1.3.0-py3-none-any.whl (from https://pypi.org/simple/appraise/)
2026-04-09T06:36:42,841   Found link https://files.pythonhosted.org/packages/95/41/10175dce4e4eae375e2966cc37878cb4ac280cd989a4f230eb396fb3ac3c/appraise-1.3.0.tar.gz (from https://pypi.org/simple/appraise/), version: 1.3.0
2026-04-09T06:36:42,842 Fetching project page and analyzing links: https://www.piwheels.org/simple/appraise/
2026-04-09T06:36:42,842 Getting page https://www.piwheels.org/simple/appraise/
2026-04-09T06:36:42,843 Found index url https://www.piwheels.org/simple
2026-04-09T06:36:43,024 Fetched page https://www.piwheels.org/simple/appraise/ as text/html
2026-04-09T06:36:43,027   Skipping link: No binaries permitted for appraise: https://archive1.piwheels.org/simple/appraise/appraise-1.2.4-py3-none-any.whl#sha256=c5aabf28cfc5d43a689fd95a227e6bbb9d6aec52f7f3f34cdd63fa72214c997d (from https://www.piwheels.org/simple/appraise/)
2026-04-09T06:36:43,027   Skipping link: No binaries permitted for appraise: https://archive1.piwheels.org/simple/appraise/appraise-1.2.3-py3-none-any.whl#sha256=66bc0411d7e1f3a455fc93a9f7f1939a91797425b2fb124bf68d59d142a04d38 (from https://www.piwheels.org/simple/appraise/)
2026-04-09T06:36:43,028   Skipping link: No binaries permitted for appraise: https://archive1.piwheels.org/simple/appraise/appraise-1.2.2-py3-none-any.whl#sha256=94d7199eafba2cff29c589c93d05ed6f0bfda6bda1534f44faf4e519673391fa (from https://www.piwheels.org/simple/appraise/)
2026-04-09T06:36:43,028   Skipping link: No binaries permitted for appraise: https://archive1.piwheels.org/simple/appraise/appraise-1.2.1-py3-none-any.whl#sha256=2e350f919c37bfffb69e71f295526d2c3642c757dbdda6de1048600a795ad2a9 (from https://www.piwheels.org/simple/appraise/)
2026-04-09T06:36:43,029   Skipping link: No binaries permitted for appraise: https://archive1.piwheels.org/simple/appraise/appraise-1.2.0.1-py3-none-any.whl#sha256=14110ceb491d252cc379f30546a0aa38e4f953d1815d2266e9a5be5accf17ff7 (from https://www.piwheels.org/simple/appraise/)
2026-04-09T06:36:43,030   Skipping link: No binaries permitted for appraise: https://archive1.piwheels.org/simple/appraise/appraise-1.2-py3-none-any.whl#sha256=49891bf3b77a06f75676d517767adb0e2612ef53885690e29df6a15df67ee040 (from https://www.piwheels.org/simple/appraise/)
2026-04-09T06:36:43,030 Skipping link: not a file: https://www.piwheels.org/simple/appraise/
2026-04-09T06:36:43,031 Skipping link: not a file: https://pypi.org/simple/appraise/
2026-04-09T06:36:43,050 Given no hashes to check 1 links for project 'appraise': discarding no candidates
2026-04-09T06:36:43,068 Collecting appraise==1.2.5
2026-04-09T06:36:43,071   Created temporary directory: /tmp/pip-unpack-470g_v1b
2026-04-09T06:36:43,295   Downloading appraise-1.2.5.tar.gz (25 kB)
2026-04-09T06:36:43,334   Added appraise==1.2.5 from https://files.pythonhosted.org/packages/3e/17/9aa8bc1b782b00d0046bfe6f20b51ac6ed0a58769414847d8f93eb190ac8/appraise-1.2.5.tar.gz to build tracker '/tmp/pip-build-tracker-v2prknks'
2026-04-09T06:36:43,336   Running setup.py (path:/tmp/pip-wheel-ad9hxa5n/appraise_0e2b4312a3974b36aba70138140c9ae1/setup.py) egg_info for package appraise
2026-04-09T06:36:43,337   Created temporary directory: /tmp/pip-pip-egg-info-j_1x4ti2
2026-04-09T06:36:43,337   Preparing metadata (setup.py): started
2026-04-09T06:36:43,339   Running command python setup.py egg_info
2026-04-09T06:36:44,229   running egg_info
2026-04-09T06:36:44,256   creating /tmp/pip-pip-egg-info-j_1x4ti2/appraise.egg-info
2026-04-09T06:36:44,257   writing /tmp/pip-pip-egg-info-j_1x4ti2/appraise.egg-info/PKG-INFO
2026-04-09T06:36:44,260   writing dependency_links to /tmp/pip-pip-egg-info-j_1x4ti2/appraise.egg-info/dependency_links.txt
2026-04-09T06:36:44,262   writing requirements to /tmp/pip-pip-egg-info-j_1x4ti2/appraise.egg-info/requires.txt
2026-04-09T06:36:44,264   writing top-level names to /tmp/pip-pip-egg-info-j_1x4ti2/appraise.egg-info/top_level.txt
2026-04-09T06:36:44,265   writing manifest file '/tmp/pip-pip-egg-info-j_1x4ti2/appraise.egg-info/SOURCES.txt'
2026-04-09T06:36:44,352   reading manifest file '/tmp/pip-pip-egg-info-j_1x4ti2/appraise.egg-info/SOURCES.txt'
2026-04-09T06:36:44,354   adding license file 'LICENSE'
2026-04-09T06:36:44,356   writing manifest file '/tmp/pip-pip-egg-info-j_1x4ti2/appraise.egg-info/SOURCES.txt'
2026-04-09T06:36:44,463   Preparing metadata (setup.py): finished with status 'done'
2026-04-09T06:36:44,467   Source in /tmp/pip-wheel-ad9hxa5n/appraise_0e2b4312a3974b36aba70138140c9ae1 has version 1.2.5, which satisfies requirement appraise==1.2.5 from https://files.pythonhosted.org/packages/3e/17/9aa8bc1b782b00d0046bfe6f20b51ac6ed0a58769414847d8f93eb190ac8/appraise-1.2.5.tar.gz
2026-04-09T06:36:44,468   Removed appraise==1.2.5 from https://files.pythonhosted.org/packages/3e/17/9aa8bc1b782b00d0046bfe6f20b51ac6ed0a58769414847d8f93eb190ac8/appraise-1.2.5.tar.gz from build tracker '/tmp/pip-build-tracker-v2prknks'
2026-04-09T06:36:44,473 Created temporary directory: /tmp/pip-unpack-zv4olmyc
2026-04-09T06:36:44,474 Building wheels for collected packages: appraise
2026-04-09T06:36:44,479   Created temporary directory: /tmp/pip-wheel-yiv0scfo
2026-04-09T06:36:44,479   Building wheel for appraise (setup.py): started
2026-04-09T06:36:44,481   Destination directory: /tmp/pip-wheel-yiv0scfo
2026-04-09T06:36:44,481   Running command python setup.py bdist_wheel
2026-04-09T06:36:45,317   running bdist_wheel
2026-04-09T06:36:45,454   running build
2026-04-09T06:36:45,454   running build_py
2026-04-09T06:36:45,486   creating build/lib/appraise
2026-04-09T06:36:45,488   copying appraise/input_fasta_prep.py -> build/lib/appraise
2026-04-09T06:36:45,491   copying appraise/__init__.py -> build/lib/appraise
2026-04-09T06:36:45,493   copying appraise/utilities.py -> build/lib/appraise
2026-04-09T06:36:45,496   copying appraise/pymol_quantify_peptide_binding.py -> build/lib/appraise
2026-04-09T06:36:45,499   copying appraise/score_calculation.py -> build/lib/appraise
2026-04-09T06:36:45,530   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2026-04-09T06:36:45,531   !!

2026-04-09T06:36:45,532           ********************************************************************************
2026-04-09T06:36:45,533           Please avoid running ``setup.py`` directly.
2026-04-09T06:36:45,534           Instead, use pypa/build, pypa/installer or other
2026-04-09T06:36:45,534           standards-based tools.

2026-04-09T06:36:45,535           This deprecation is overdue, please update your project and remove deprecated
2026-04-09T06:36:45,536           calls to avoid build errors in the future.

2026-04-09T06:36:45,537           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2026-04-09T06:36:45,538           ********************************************************************************

2026-04-09T06:36:45,539   !!
2026-04-09T06:36:45,540     self.initialize_options()
2026-04-09T06:36:45,558   installing to build/bdist.linux-armv7l/wheel
2026-04-09T06:36:45,559   running install
2026-04-09T06:36:45,583   running install_lib
2026-04-09T06:36:45,609   creating build/bdist.linux-armv7l/wheel
2026-04-09T06:36:45,612   creating build/bdist.linux-armv7l/wheel/appraise
2026-04-09T06:36:45,613   copying build/lib/appraise/input_fasta_prep.py -> build/bdist.linux-armv7l/wheel/./appraise
2026-04-09T06:36:45,615   copying build/lib/appraise/__init__.py -> build/bdist.linux-armv7l/wheel/./appraise
2026-04-09T06:36:45,617   copying build/lib/appraise/utilities.py -> build/bdist.linux-armv7l/wheel/./appraise
2026-04-09T06:36:45,620   copying build/lib/appraise/pymol_quantify_peptide_binding.py -> build/bdist.linux-armv7l/wheel/./appraise
2026-04-09T06:36:45,623   copying build/lib/appraise/score_calculation.py -> build/bdist.linux-armv7l/wheel/./appraise
2026-04-09T06:36:45,625   running install_egg_info
2026-04-09T06:36:45,660   running egg_info
2026-04-09T06:36:45,687   writing appraise.egg-info/PKG-INFO
2026-04-09T06:36:45,690   writing dependency_links to appraise.egg-info/dependency_links.txt
2026-04-09T06:36:45,692   writing requirements to appraise.egg-info/requires.txt
2026-04-09T06:36:45,693   writing top-level names to appraise.egg-info/top_level.txt
2026-04-09T06:36:45,722   reading manifest file 'appraise.egg-info/SOURCES.txt'
2026-04-09T06:36:45,725   adding license file 'LICENSE'
2026-04-09T06:36:45,728   writing manifest file 'appraise.egg-info/SOURCES.txt'
2026-04-09T06:36:45,729   Copying appraise.egg-info to build/bdist.linux-armv7l/wheel/./appraise-1.2.5-py3.11.egg-info
2026-04-09T06:36:45,739   running install_scripts
2026-04-09T06:36:45,752   creating build/bdist.linux-armv7l/wheel/appraise-1.2.5.dist-info/WHEEL
2026-04-09T06:36:45,754   creating '/tmp/pip-wheel-yiv0scfo/appraise-1.2.5-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2026-04-09T06:36:45,757   adding 'appraise/__init__.py'
2026-04-09T06:36:45,759   adding 'appraise/input_fasta_prep.py'
2026-04-09T06:36:45,764   adding 'appraise/pymol_quantify_peptide_binding.py'
2026-04-09T06:36:45,766   adding 'appraise/score_calculation.py'
2026-04-09T06:36:45,768   adding 'appraise/utilities.py'
2026-04-09T06:36:45,772   adding 'appraise-1.2.5.dist-info/licenses/LICENSE'
2026-04-09T06:36:45,774   adding 'appraise-1.2.5.dist-info/METADATA'
2026-04-09T06:36:45,775   adding 'appraise-1.2.5.dist-info/WHEEL'
2026-04-09T06:36:45,776   adding 'appraise-1.2.5.dist-info/top_level.txt'
2026-04-09T06:36:45,777   adding 'appraise-1.2.5.dist-info/RECORD'
2026-04-09T06:36:45,778   removing build/bdist.linux-armv7l/wheel
2026-04-09T06:36:45,891   Building wheel for appraise (setup.py): finished with status 'done'
2026-04-09T06:36:45,894   Created wheel for appraise: filename=appraise-1.2.5-py3-none-any.whl size=26290 sha256=f6f25d0b265c96fbb4c37c8cf2dd879cce566c5e86a2b19a120dadc9409d6720
2026-04-09T06:36:45,895   Stored in directory: /tmp/pip-ephem-wheel-cache-z9kg095e/wheels/fb/09/3a/104fe86162cc29e62aa66cf973775e8752d75b6e6b5a19ceb6
2026-04-09T06:36:45,906 Successfully built appraise
2026-04-09T06:36:45,910 Removed build tracker: '/tmp/pip-build-tracker-v2prknks'