2026-04-09T11:08:52,081 Created temporary directory: /tmp/pip-ephem-wheel-cache-vr7kijwj 2026-04-09T11:08:52,083 Created temporary directory: /tmp/pip-build-tracker-2okje94o 2026-04-09T11:08:52,084 Initialized build tracking at /tmp/pip-build-tracker-2okje94o 2026-04-09T11:08:52,084 Created build tracker: /tmp/pip-build-tracker-2okje94o 2026-04-09T11:08:52,085 Entered build tracker: /tmp/pip-build-tracker-2okje94o 2026-04-09T11:08:52,085 Created temporary directory: /tmp/pip-wheel-2jtzgxhn 2026-04-09T11:08:52,088 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-09T11:08:52,091 Created temporary directory: /tmp/pip-ephem-wheel-cache-tymfc4i4 2026-04-09T11:08:52,112 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-09T11:08:52,116 2 location(s) to search for versions of efishent: 2026-04-09T11:08:52,116 * https://pypi.org/simple/efishent/ 2026-04-09T11:08:52,116 * https://www.piwheels.org/simple/efishent/ 2026-04-09T11:08:52,117 Fetching project page and analyzing links: https://pypi.org/simple/efishent/ 2026-04-09T11:08:52,117 Getting page https://pypi.org/simple/efishent/ 2026-04-09T11:08:52,119 Found index url https://pypi.org/simple 2026-04-09T11:08:52,345 Fetched page https://pypi.org/simple/efishent/ as application/vnd.pypi.simple.v1+json 2026-04-09T11:08:52,350 Found link https://files.pythonhosted.org/packages/e2/2c/cf7d5a5be6e84e7e329b534a05d89d2db8218048a28c4e80818b4cfae92d/eFISHent-0.0.1.tar.gz (from https://pypi.org/simple/efishent/) (requires-python:>3.9), version: 0.0.1 2026-04-09T11:08:52,351 Found link https://files.pythonhosted.org/packages/1b/6d/e04885c0954cb2a767ea5afd763bb193d1759fd9a108ff47fe5c6ae12226/eFISHent-0.0.2.tar.gz (from https://pypi.org/simple/efishent/) (requires-python:>=3.7), version: 0.0.2 2026-04-09T11:08:52,352 Skipping link: No binaries permitted for efishent: https://files.pythonhosted.org/packages/0b/c4/2dbaa48be02a5d5b51ca3f95d6e3970a1d8de3bccfa74330a3a427413ec1/eFISHent-0.0.3-py3-none-any.whl (from https://pypi.org/simple/efishent/) (requires-python:>=3.7) 2026-04-09T11:08:52,353 Found link https://files.pythonhosted.org/packages/7c/38/3cdd097202e06174dc949e08f46a8476a392224a0a3a7bbf76f4472b124c/eFISHent-0.0.3.tar.gz (from https://pypi.org/simple/efishent/) (requires-python:>=3.7), version: 0.0.3 2026-04-09T11:08:52,353 Skipping link: No binaries permitted for efishent: https://files.pythonhosted.org/packages/d4/14/ef578628f34f7567bcce9889ff00aca27da51ac282757761bd73b6a5300d/eFISHent-0.0.4-py3-none-any.whl (from https://pypi.org/simple/efishent/) (requires-python:>=3.8) 2026-04-09T11:08:52,354 Found link https://files.pythonhosted.org/packages/ae/4b/c1fc2fecd6f2e011b5f0fa20af95deb154940dbcbc75c0b64da28fad7596/eFISHent-0.0.4.tar.gz (from https://pypi.org/simple/efishent/) (requires-python:>=3.8), version: 0.0.4 2026-04-09T11:08:52,355 Skipping link: No binaries permitted for efishent: https://files.pythonhosted.org/packages/8a/91/b3ae940cef1d924534652a7b7ad11c28cbcddc788bb29b688a1c4f60009d/eFISHent-0.0.5-py3-none-any.whl (from https://pypi.org/simple/efishent/) (requires-python:>=3.8) 2026-04-09T11:08:52,356 Found link https://files.pythonhosted.org/packages/83/76/80891af507e5cf883195304428ab91e5905b65e772fac2095225636fd738/eFISHent-0.0.5.tar.gz (from https://pypi.org/simple/efishent/) (requires-python:>=3.8), version: 0.0.5 2026-04-09T11:08:52,357 Skipping link: No binaries permitted for efishent: https://files.pythonhosted.org/packages/bc/ec/8d61161ec14ea79f34114fb832680f0bc462f2dce8a1944ec049563e2784/efishent-0.0.7-py3-none-any.whl (from https://pypi.org/simple/efishent/) (requires-python:>=3.8) 2026-04-09T11:08:52,357 Found link https://files.pythonhosted.org/packages/d3/13/6d429bcb2a4da2cbd03aff6874d2afe778ac681ea0c5a8476b18609d996e/efishent-0.0.7.tar.gz (from https://pypi.org/simple/efishent/) (requires-python:>=3.8), version: 0.0.7 2026-04-09T11:08:52,358 Skipping link: No binaries permitted for efishent: https://files.pythonhosted.org/packages/60/72/232f3d80c8abec6d9e49afe1f459e54862650633ce6920ba48a2aeb8461c/efishent-0.0.8-py3-none-any.whl (from https://pypi.org/simple/efishent/) (requires-python:>=3.8) 2026-04-09T11:08:52,360 Found link https://files.pythonhosted.org/packages/22/ea/75207a248bd229ff01b371c35c9297bcac191b1de8f4f8b608db78ace84b/efishent-0.0.8.tar.gz (from https://pypi.org/simple/efishent/) (requires-python:>=3.8), version: 0.0.8 2026-04-09T11:08:52,360 Skipping link: No binaries permitted for efishent: https://files.pythonhosted.org/packages/da/2f/05de2636b6c75bbab631ba8494016846366d63544e0906ac47b535f1ae40/efishent-0.0.9-py3-none-any.whl (from https://pypi.org/simple/efishent/) (requires-python:>=3.8) 2026-04-09T11:08:52,361 Found link https://files.pythonhosted.org/packages/5c/f2/4822805871815b0db01a86c27522e87ac7894f973cd320489c1574908592/efishent-0.0.9.tar.gz (from https://pypi.org/simple/efishent/) (requires-python:>=3.8), version: 0.0.9 2026-04-09T11:08:52,362 Skipping link: No binaries permitted for efishent: https://files.pythonhosted.org/packages/3d/fd/77b88132c4493d5d77568b2c0c6e20316cab877eb2b70f2f0eb4b01757b1/efishent-0.0.11-py3-none-any.whl (from https://pypi.org/simple/efishent/) (requires-python:>=3.8) 2026-04-09T11:08:52,362 Found link https://files.pythonhosted.org/packages/ba/33/aed5967982ef50b5529fa2d02bf35166e3f006fc29e79ba6c5bffd8f9bec/efishent-0.0.11.tar.gz (from https://pypi.org/simple/efishent/) (requires-python:>=3.8), version: 0.0.11 2026-04-09T11:08:52,363 Skipping link: No binaries permitted for efishent: https://files.pythonhosted.org/packages/7e/7a/4b557090a258740a1a8be27513ad30228ce3cde546f67a2a42aa9a948b51/efishent-0.0.12-py3-none-any.whl (from https://pypi.org/simple/efishent/) (requires-python:>=3.8) 2026-04-09T11:08:52,364 Found link https://files.pythonhosted.org/packages/19/17/2d553c1a5b282e2c54bc903926096bb4de589fc2038af5a1a9bb66a0065f/efishent-0.0.12.tar.gz (from https://pypi.org/simple/efishent/) (requires-python:>=3.8), version: 0.0.12 2026-04-09T11:08:52,364 Skipping link: No binaries permitted for efishent: https://files.pythonhosted.org/packages/ae/84/dbdba2b9d0446d7139b330542dff0358d8d6c35948a40f82dd99e0adb49b/efishent-0.0.13-py3-none-any.whl (from https://pypi.org/simple/efishent/) (requires-python:>=3.10) 2026-04-09T11:08:52,366 Found link https://files.pythonhosted.org/packages/f4/4d/9d4754e02b0ea219a78475a75f8c2e69b0a0502bb33b7c6f038ed234f26a/efishent-0.0.13.tar.gz (from https://pypi.org/simple/efishent/) (requires-python:>=3.10), version: 0.0.13 2026-04-09T11:08:52,366 Skipping link: No binaries permitted for efishent: https://files.pythonhosted.org/packages/52/c0/133282efb1d255a0dd3b365c6442455b44a1017f879be1190214fc189ea9/efishent-0.0.14-py3-none-any.whl (from https://pypi.org/simple/efishent/) (requires-python:>=3.10) 2026-04-09T11:08:52,367 Found link https://files.pythonhosted.org/packages/bf/3b/49fc8c66f5e73b7f7d5fc8c37d11aa4ffede77a57ab98ffa05010d76351b/efishent-0.0.14.tar.gz (from https://pypi.org/simple/efishent/) (requires-python:>=3.10), version: 0.0.14 2026-04-09T11:08:52,368 Fetching project page and analyzing links: https://www.piwheels.org/simple/efishent/ 2026-04-09T11:08:52,369 Getting page https://www.piwheels.org/simple/efishent/ 2026-04-09T11:08:52,370 Found index url https://www.piwheels.org/simple 2026-04-09T11:08:52,547 Fetched page https://www.piwheels.org/simple/efishent/ as text/html 2026-04-09T11:08:52,551 Skipping link: No binaries permitted for efishent: https://www.piwheels.org/simple/efishent/efishent-0.0.13-py3-none-any.whl#sha256=f1d28ef18c2e67ae3122942aa5d2b91df2498fd16bfe28d786fec291ec277da0 (from https://www.piwheels.org/simple/efishent/) (requires-python:>=3.10) 2026-04-09T11:08:52,552 Skipping link: No binaries permitted for efishent: https://www.piwheels.org/simple/efishent/efishent-0.0.12-py3-none-any.whl#sha256=6ab83e5c0f14eb8ae4dcf87c6ef27c88dd9214a89a6ef31970820c6efe42b40a (from https://www.piwheels.org/simple/efishent/) (requires-python:>=3.8) 2026-04-09T11:08:52,552 Skipping link: No binaries permitted for efishent: https://www.piwheels.org/simple/efishent/efishent-0.0.11-py3-none-any.whl#sha256=2922584b42d0277c6f8815b97350fb70130086b312eaa4cf47980cecccfea991 (from https://www.piwheels.org/simple/efishent/) (requires-python:>=3.8) 2026-04-09T11:08:52,553 Skipping link: No binaries permitted for efishent: https://www.piwheels.org/simple/efishent/efishent-0.0.9-py3-none-any.whl#sha256=24fae90e78894a32878541aa5858f1a4861174058e3dc7da3d3e59c17d10e64e (from https://www.piwheels.org/simple/efishent/) (requires-python:>=3.8) 2026-04-09T11:08:52,554 Skipping link: No binaries permitted for efishent: https://www.piwheels.org/simple/efishent/efishent-0.0.8-py3-none-any.whl#sha256=d499d4fc4d92413671203aa610466707717f10d4f7ef5e139fd0ce08e034ea14 (from https://www.piwheels.org/simple/efishent/) (requires-python:>=3.8) 2026-04-09T11:08:52,554 Skipping link: No binaries permitted for efishent: https://archive1.piwheels.org/simple/efishent/efishent-0.0.7-py3-none-any.whl#sha256=53739ef8bb4a81d07f33d44b47229249878f07e0cd7f522b6e755221240b0826 (from https://www.piwheels.org/simple/efishent/) (requires-python:>=3.8) 2026-04-09T11:08:52,555 Skipping link: No binaries permitted for efishent: https://archive1.piwheels.org/simple/efishent/eFISHent-0.0.5-py3-none-any.whl#sha256=52a9305d3023e96658e150d1eb743d122c0c2d3d035b4f089ea7ac3a90ec2227 (from https://www.piwheels.org/simple/efishent/) (requires-python:>=3.8) 2026-04-09T11:08:52,555 Skipping link: No binaries permitted for efishent: https://archive1.piwheels.org/simple/efishent/eFISHent-0.0.4-py3-none-any.whl#sha256=a0fced7c03a7f2980ec1b77a09fbde6b06f3471d474cbd6c2a0226e7eae3d9f4 (from https://www.piwheels.org/simple/efishent/) (requires-python:>=3.8) 2026-04-09T11:08:52,556 Skipping link: No binaries permitted for efishent: https://archive1.piwheels.org/simple/efishent/eFISHent-0.0.3-py3-none-any.whl#sha256=2630fc0f3eb21e001c3fdb4b1fa4032537d8bfcfb6309038a3b62b582fbbfe47 (from https://www.piwheels.org/simple/efishent/) (requires-python:>=3.7) 2026-04-09T11:08:52,556 Skipping link: No binaries permitted for efishent: https://archive1.piwheels.org/simple/efishent/eFISHent-0.0.2-py3-none-any.whl#sha256=ef8bd7d96a16e1353939128da53ed0f24fb76d56c258f4089ab106550b821bac (from https://www.piwheels.org/simple/efishent/) (requires-python:>=3.7) 2026-04-09T11:08:52,557 Skipping link: No binaries permitted for efishent: https://archive1.piwheels.org/simple/efishent/eFISHent-0.0.1-py2.py3-none-any.whl#sha256=bd0922ddbe9ed4e571408464b76cd95dbd713299c18231e28f3c4b7dbe9852c1 (from https://www.piwheels.org/simple/efishent/) (requires-python:>3.9) 2026-04-09T11:08:52,557 Skipping link: not a file: https://www.piwheels.org/simple/efishent/ 2026-04-09T11:08:52,558 Skipping link: not a file: https://pypi.org/simple/efishent/ 2026-04-09T11:08:52,580 Given no hashes to check 1 links for project 'efishent': discarding no candidates 2026-04-09T11:08:52,600 Collecting efishent==0.0.14 2026-04-09T11:08:52,602 Created temporary directory: /tmp/pip-unpack-wegyl3bm 2026-04-09T11:08:52,833 Downloading efishent-0.0.14.tar.gz (2.8 MB) 2026-04-09T11:08:54,487 Added efishent==0.0.14 from https://files.pythonhosted.org/packages/bf/3b/49fc8c66f5e73b7f7d5fc8c37d11aa4ffede77a57ab98ffa05010d76351b/efishent-0.0.14.tar.gz to build tracker '/tmp/pip-build-tracker-2okje94o' 2026-04-09T11:08:54,493 Created temporary directory: /tmp/pip-build-env-pctqc4gw 2026-04-09T11:08:54,498 Installing build dependencies: started 2026-04-09T11:08:54,499 Running command pip subprocess to install build dependencies 2026-04-09T11:08:55,740 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-04-09T11:08:56,172 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-09T11:08:56,198 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-09T11:08:57,992 Collecting setuptools>=61.0 2026-04-09T11:08:58,071 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-04-09T11:08:58,338 Collecting wheel 2026-04-09T11:08:58,356 Using cached https://www.piwheels.org/simple/wheel/wheel-0.46.3-py3-none-any.whl (30 kB) 2026-04-09T11:08:58,542 Collecting packaging>=24.0 2026-04-09T11:08:58,559 Using cached https://www.piwheels.org/simple/packaging/packaging-26.0-py3-none-any.whl (74 kB) 2026-04-09T11:09:01,499 Installing collected packages: setuptools, packaging, wheel 2026-04-09T11:09:04,862 Creating /tmp/pip-build-env-pctqc4gw/overlay/local/bin 2026-04-09T11:09:04,864 changing mode of /tmp/pip-build-env-pctqc4gw/overlay/local/bin/wheel to 755 2026-04-09T11:09:04,885 Successfully installed packaging-26.0 setuptools-82.0.1 wheel-0.46.3 2026-04-09T11:09:05,165 Installing build dependencies: finished with status 'done' 2026-04-09T11:09:05,171 Getting requirements to build wheel: started 2026-04-09T11:09:05,172 Running command Getting requirements to build wheel 2026-04-09T11:09:05,861 running egg_info 2026-04-09T11:09:05,867 writing eFISHent.egg-info/PKG-INFO 2026-04-09T11:09:05,870 writing dependency_links to eFISHent.egg-info/dependency_links.txt 2026-04-09T11:09:05,872 writing entry points to eFISHent.egg-info/entry_points.txt 2026-04-09T11:09:05,874 writing requirements to eFISHent.egg-info/requires.txt 2026-04-09T11:09:05,875 writing top-level names to eFISHent.egg-info/top_level.txt 2026-04-09T11:09:06,062 reading manifest file 'eFISHent.egg-info/SOURCES.txt' 2026-04-09T11:09:06,077 reading manifest template 'MANIFEST.in' 2026-04-09T11:09:06,079 no previously-included directories found matching 'tests' 2026-04-09T11:09:06,080 no previously-included directories found matching 'dist' 2026-04-09T11:09:06,082 warning: no previously-included files found matching '.*' 2026-04-09T11:09:06,616 warning: no files found matching '*.yaml' under directory 'conda' 2026-04-09T11:09:06,617 warning: no files found matching 'LICENSE' 2026-04-09T11:09:06,618 warning: no files found matching 'environment.yml' 2026-04-09T11:09:06,619 warning: no files found matching 'requirements.txt' 2026-04-09T11:09:06,636 writing manifest file 'eFISHent.egg-info/SOURCES.txt' 2026-04-09T11:09:06,735 Getting requirements to build wheel: finished with status 'done' 2026-04-09T11:09:06,739 Created temporary directory: /tmp/pip-modern-metadata-_wqdziy3 2026-04-09T11:09:06,741 Preparing metadata (pyproject.toml): started 2026-04-09T11:09:06,743 Running command Preparing metadata (pyproject.toml) 2026-04-09T11:09:07,422 running dist_info 2026-04-09T11:09:07,432 creating /tmp/pip-modern-metadata-_wqdziy3/eFISHent.egg-info 2026-04-09T11:09:07,433 writing /tmp/pip-modern-metadata-_wqdziy3/eFISHent.egg-info/PKG-INFO 2026-04-09T11:09:07,438 writing dependency_links to /tmp/pip-modern-metadata-_wqdziy3/eFISHent.egg-info/dependency_links.txt 2026-04-09T11:09:07,440 writing entry points to /tmp/pip-modern-metadata-_wqdziy3/eFISHent.egg-info/entry_points.txt 2026-04-09T11:09:07,442 writing requirements to /tmp/pip-modern-metadata-_wqdziy3/eFISHent.egg-info/requires.txt 2026-04-09T11:09:07,443 writing top-level names to /tmp/pip-modern-metadata-_wqdziy3/eFISHent.egg-info/top_level.txt 2026-04-09T11:09:07,445 writing manifest file '/tmp/pip-modern-metadata-_wqdziy3/eFISHent.egg-info/SOURCES.txt' 2026-04-09T11:09:07,487 reading manifest file '/tmp/pip-modern-metadata-_wqdziy3/eFISHent.egg-info/SOURCES.txt' 2026-04-09T11:09:07,490 reading manifest template 'MANIFEST.in' 2026-04-09T11:09:07,491 no previously-included directories found matching 'tests' 2026-04-09T11:09:07,492 no previously-included directories found matching 'dist' 2026-04-09T11:09:07,492 warning: no previously-included files found matching '.*' 2026-04-09T11:09:07,797 warning: no files found matching '*.yaml' under directory 'conda' 2026-04-09T11:09:07,799 warning: no files found matching 'LICENSE' 2026-04-09T11:09:07,799 warning: no files found matching 'environment.yml' 2026-04-09T11:09:07,800 warning: no files found matching 'requirements.txt' 2026-04-09T11:09:07,812 writing manifest file '/tmp/pip-modern-metadata-_wqdziy3/eFISHent.egg-info/SOURCES.txt' 2026-04-09T11:09:07,814 creating '/tmp/pip-modern-metadata-_wqdziy3/efishent-0.0.14.dist-info' 2026-04-09T11:09:07,937 Preparing metadata (pyproject.toml): finished with status 'done' 2026-04-09T11:09:07,943 Source in /tmp/pip-wheel-2jtzgxhn/efishent_7d44905a4f824daeb2f05188a07220fa has version 0.0.14, which satisfies requirement efishent==0.0.14 from https://files.pythonhosted.org/packages/bf/3b/49fc8c66f5e73b7f7d5fc8c37d11aa4ffede77a57ab98ffa05010d76351b/efishent-0.0.14.tar.gz 2026-04-09T11:09:07,944 Removed efishent==0.0.14 from https://files.pythonhosted.org/packages/bf/3b/49fc8c66f5e73b7f7d5fc8c37d11aa4ffede77a57ab98ffa05010d76351b/efishent-0.0.14.tar.gz from build tracker '/tmp/pip-build-tracker-2okje94o' 2026-04-09T11:09:07,952 Created temporary directory: /tmp/pip-unpack-6712lf56 2026-04-09T11:09:07,952 Building wheels for collected packages: efishent 2026-04-09T11:09:07,957 Created temporary directory: /tmp/pip-wheel-eg4vxvp9 2026-04-09T11:09:07,957 Destination directory: /tmp/pip-wheel-eg4vxvp9 2026-04-09T11:09:07,959 Building wheel for efishent (pyproject.toml): started 2026-04-09T11:09:07,960 Running command Building wheel for efishent (pyproject.toml) 2026-04-09T11:09:08,619 running bdist_wheel 2026-04-09T11:09:08,637 running build 2026-04-09T11:09:08,637 running build_py 2026-04-09T11:09:08,644 creating build/lib/eFISHent 2026-04-09T11:09:08,646 copying eFISHent/basic_filtering.py -> build/lib/eFISHent 2026-04-09T11:09:08,649 copying eFISHent/__init__.py -> build/lib/eFISHent 2026-04-09T11:09:08,651 copying eFISHent/config.py -> build/lib/eFISHent 2026-04-09T11:09:08,653 copying eFISHent/util.py -> build/lib/eFISHent 2026-04-09T11:09:08,656 copying eFISHent/transcriptome_filter.py -> build/lib/eFISHent 2026-04-09T11:09:08,658 copying eFISHent/kmers.py -> build/lib/eFISHent 2026-04-09T11:09:08,661 copying eFISHent/console.py -> build/lib/eFISHent 2026-04-09T11:09:08,663 copying eFISHent/optimization.py -> build/lib/eFISHent 2026-04-09T11:09:08,666 copying eFISHent/analyze.py -> build/lib/eFISHent 2026-04-09T11:09:08,668 copying eFISHent/secondary_structure.py -> build/lib/eFISHent 2026-04-09T11:09:08,670 copying eFISHent/prepare_sequence.py -> build/lib/eFISHent 2026-04-09T11:09:08,673 copying eFISHent/rdna_filter.py -> build/lib/eFISHent 2026-04-09T11:09:08,675 copying eFISHent/cleanup.py -> build/lib/eFISHent 2026-04-09T11:09:08,678 copying eFISHent/presets.py -> build/lib/eFISHent 2026-04-09T11:09:08,680 copying eFISHent/indexing.py -> build/lib/eFISHent 2026-04-09T11:09:08,682 copying eFISHent/prebuilt.py -> build/lib/eFISHent 2026-04-09T11:09:08,684 copying eFISHent/__main__.py -> build/lib/eFISHent 2026-04-09T11:09:08,686 copying eFISHent/gene_annotation.py -> build/lib/eFISHent 2026-04-09T11:09:08,688 copying eFISHent/cli.py -> build/lib/eFISHent 2026-04-09T11:09:08,692 copying eFISHent/constants.py -> build/lib/eFISHent 2026-04-09T11:09:08,694 copying eFISHent/alignment.py -> build/lib/eFISHent 2026-04-09T11:09:08,696 copying eFISHent/generate_probes.py -> build/lib/eFISHent 2026-04-09T11:09:08,700 running egg_info 2026-04-09T11:09:08,709 writing eFISHent.egg-info/PKG-INFO 2026-04-09T11:09:08,713 writing dependency_links to eFISHent.egg-info/dependency_links.txt 2026-04-09T11:09:08,714 writing entry points to eFISHent.egg-info/entry_points.txt 2026-04-09T11:09:08,716 writing requirements to eFISHent.egg-info/requires.txt 2026-04-09T11:09:08,717 writing top-level names to eFISHent.egg-info/top_level.txt 2026-04-09T11:09:08,749 reading manifest file 'eFISHent.egg-info/SOURCES.txt' 2026-04-09T11:09:08,764 reading manifest template 'MANIFEST.in' 2026-04-09T11:09:08,765 no previously-included directories found matching 'tests' 2026-04-09T11:09:08,766 no previously-included directories found matching 'dist' 2026-04-09T11:09:08,767 warning: no previously-included files found matching '.*' 2026-04-09T11:09:09,071 warning: no files found matching '*.yaml' under directory 'conda' 2026-04-09T11:09:09,072 warning: no files found matching 'LICENSE' 2026-04-09T11:09:09,073 warning: no files found matching 'environment.yml' 2026-04-09T11:09:09,073 warning: no files found matching 'requirements.txt' 2026-04-09T11:09:09,089 writing manifest file 'eFISHent.egg-info/SOURCES.txt' 2026-04-09T11:09:09,122 copying eFISHent/Fold_linux -> build/lib/eFISHent 2026-04-09T11:09:09,146 copying eFISHent/Fold_osx -> build/lib/eFISHent 2026-04-09T11:09:09,182 copying eFISHent/luigi.cfg -> build/lib/eFISHent 2026-04-09T11:09:09,184 creating build/lib/eFISHent/data_tables 2026-04-09T11:09:09,185 copying eFISHent/data_tables/rna.tstacki23.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,187 copying eFISHent/data_tables/dna.tloop.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,189 copying eFISHent/data_tables/dna.stack.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,191 copying eFISHent/data_tables/rna.dynalignmiscloop.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,193 copying eFISHent/data_tables/dna.hexaloop.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,196 copying eFISHent/data_tables/dnatstacki23.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,198 copying eFISHent/data_tables/b-test.int21.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,202 copying eFISHent/data_tables/design.RNA.Helices.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,205 copying eFISHent/data_tables/rna.miscloop.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,207 copying eFISHent/data_tables/rna.hexaloop.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,209 copying eFISHent/data_tables/dnatloop.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,211 copying eFISHent/data_tables/dnatstack.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,214 copying eFISHent/data_tables/dnatstacki.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,216 copying eFISHent/data_tables/rna.cov.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,238 copying eFISHent/data_tables/int22-exp.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,242 copying eFISHent/data_tables/rna.specification.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,244 copying eFISHent/data_tables/helixdr.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,246 copying eFISHent/data_tables/m6A.miscloop.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,248 copying eFISHent/data_tables/dna.tstackcoax.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,250 copying eFISHent/data_tables/dnahexaloop.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,252 copying eFISHent/data_tables/m6A.tstacki23.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,254 copying eFISHent/data_tables/m6A.tstacki.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,257 copying eFISHent/data_tables/dnatriloop.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,259 copying eFISHent/data_tables/dnatloop.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,261 copying eFISHent/data_tables/m6A.int22.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,266 copying eFISHent/data_tables/dna.miscloop.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,269 copying eFISHent/data_tables/rna.int22.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,272 copying eFISHent/data_tables/dna.tstacki1n.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,274 copying eFISHent/data_tables/dnacoaxial.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,277 copying eFISHent/data_tables/tstackcoax.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,279 copying eFISHent/data_tables/b-test.int22.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,287 copying eFISHent/data_tables/rna.coaxstack.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,289 copying eFISHent/data_tables/b-test.int21.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,293 copying eFISHent/data_tables/rna.coaxial.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,295 copying eFISHent/data_tables/dna.tstackh.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,297 copying eFISHent/data_tables/dnatstackh.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,299 copying eFISHent/data_tables/b-test.tloop.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,301 copying eFISHent/data_tables/m6A.tloop.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,303 copying eFISHent/data_tables/rna.tstacki23.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,305 copying eFISHent/data_tables/tstacki1n.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,308 copying eFISHent/data_tables/rna.tstackm.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,310 copying eFISHent/data_tables/dnatstackcoax.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,312 copying eFISHent/data_tables/tstacki.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,314 copying eFISHent/data_tables/dnatstacki1n.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,316 copying eFISHent/data_tables/dna.int21.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,319 copying eFISHent/data_tables/b-test.tstacki.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,321 copying eFISHent/data_tables/b-test.coaxial.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,324 copying eFISHent/data_tables/stack.ds -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,326 copying eFISHent/data_tables/dnatstacki1n.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,328 copying eFISHent/data_tables/b-test.tstack.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,331 copying eFISHent/data_tables/dnadangle.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,333 copying eFISHent/data_tables/dna.tstackm.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,336 copying eFISHent/data_tables/b-test.int22.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,341 copying eFISHent/data_tables/rna.int11.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,344 copying eFISHent/data_tables/m6A.hexaloop.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,346 copying eFISHent/data_tables/rna.tstacki.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,348 copying eFISHent/data_tables/dna.dangle.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,351 copying eFISHent/data_tables/dnamiscloop.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,353 copying eFISHent/data_tables/loop.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,356 copying eFISHent/data_tables/rna.miscloop.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,358 copying eFISHent/data_tables/b-test.triloop.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,360 copying eFISHent/data_tables/dnatstack.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,362 copying eFISHent/data_tables/dnatstackm.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,364 copying eFISHent/data_tables/dna.dangle.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,367 copying eFISHent/data_tables/rna.int21.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,370 copying eFISHent/data_tables/new_training_z_std.scale.model -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,380 copying eFISHent/data_tables/rna.tstackcoax.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,382 copying eFISHent/data_tables/rna.triloop.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,384 copying eFISHent/data_tables/fam_hmm_pars.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,387 copying eFISHent/data_tables/b-test.tstack.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,389 copying eFISHent/data_tables/tstack.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,391 copying eFISHent/data_tables/rna.coaxstack.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,393 copying eFISHent/data_tables/dna.tstacki.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,395 copying eFISHent/data_tables/tloop.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,397 copying eFISHent/data_tables/b-test.triloop.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,399 copying eFISHent/data_tables/int21.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,403 copying eFISHent/data_tables/b-test.specification.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,405 copying eFISHent/data_tables/dnamiscloop.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,407 copying eFISHent/data_tables/b-test.tstacki1n.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,409 copying eFISHent/data_tables/b-test.tstackh.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,411 copying eFISHent/data_tables/m6A.loop.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,413 copying eFISHent/data_tables/tstacki23.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,416 copying eFISHent/data_tables/rna.tstacki.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,418 copying eFISHent/data_tables/int22.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,423 copying eFISHent/data_tables/triloop.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,425 copying eFISHent/data_tables/dnatstacki23.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,427 copying eFISHent/data_tables/rna.stack.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,429 copying eFISHent/data_tables/dnadynalignmiscloop.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,431 copying eFISHent/data_tables/dnatriloop.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,433 copying eFISHent/data_tables/dnahexaloop.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,436 copying eFISHent/data_tables/m6A.stack.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,438 copying eFISHent/data_tables/dna.triloop.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,440 copying eFISHent/data_tables/b-test.dynalignmiscloop.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,442 copying eFISHent/data_tables/rna.tstackcoax.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,445 copying eFISHent/data_tables/m6A.triloop.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,447 copying eFISHent/data_tables/dnaint21.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,450 copying eFISHent/data_tables/dnaloop.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,452 copying eFISHent/data_tables/helix.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,454 copying eFISHent/data_tables/dynalignmiscloop.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,456 copying eFISHent/data_tables/int21.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,460 copying eFISHent/data_tables/b-test.tloop.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,462 copying eFISHent/data_tables/dangle.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,464 copying eFISHent/data_tables/dna.tstackcoax.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,466 copying eFISHent/data_tables/dna.tstackh.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,469 copying eFISHent/data_tables/b-test.loop.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,471 copying eFISHent/data_tables/dnaint22.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,474 copying eFISHent/data_tables/m6A.dangle.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,477 copying eFISHent/data_tables/rna.param_map.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,597 copying eFISHent/data_tables/coaxstack.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,600 copying eFISHent/data_tables/b-test.tstacki1n.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,602 copying eFISHent/data_tables/b-test.stack.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,604 copying eFISHent/data_tables/dna.coaxstack.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,606 copying eFISHent/data_tables/rna.tstack.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,608 copying eFISHent/data_tables/dnadynalignmiscloop.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,610 copying eFISHent/data_tables/dna.stack.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,612 copying eFISHent/data_tables/dna.int11.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,615 copying eFISHent/data_tables/rna.int11.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,617 copying eFISHent/data_tables/dnatstackm.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,619 copying eFISHent/data_tables/dna.coaxial.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,621 copying eFISHent/data_tables/std_ensemble_defect.model -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,624 copying eFISHent/data_tables/autodetect.txt -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,626 copying eFISHent/data_tables/dna.loop.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,629 copying eFISHent/data_tables/b-test.dangle.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,631 copying eFISHent/data_tables/dna.int22.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,635 copying eFISHent/data_tables/dna.miscloop.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,637 copying eFISHent/data_tables/b-test.tstackm.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,639 copying eFISHent/data_tables/tstackcoax.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,642 copying eFISHent/data_tables/dna.tstacki23.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,644 copying eFISHent/data_tables/dna.specification.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,646 copying eFISHent/data_tables/dnacoaxstack.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,648 copying eFISHent/data_tables/b-test.stack.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,651 copying eFISHent/data_tables/b-test.hexaloop.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,653 copying eFISHent/data_tables/dna.hexaloop.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,655 copying eFISHent/data_tables/b-test.coaxstack.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,657 copying eFISHent/data_tables/rna.int22.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,662 copying eFISHent/data_tables/b-test.tstacki23.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,664 copying eFISHent/data_tables/rna.coaxial.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,666 copying eFISHent/data_tables/tloop.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,668 copying eFISHent/data_tables/tstacki23.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,671 copying eFISHent/data_tables/dnacoaxial.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,673 copying eFISHent/data_tables/dna.coaxstack.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,675 copying eFISHent/data_tables/rna.tloop.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,678 copying eFISHent/data_tables/dna.tstack.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,680 copying eFISHent/data_tables/rna.dangle.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,682 copying eFISHent/data_tables/stack.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,685 copying eFISHent/data_tables/int11.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,688 copying eFISHent/data_tables/dnaint22.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,692 copying eFISHent/data_tables/rna.tloop.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,694 copying eFISHent/data_tables/m6A.coaxstack.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,696 copying eFISHent/data_tables/dna.loop.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,698 copying eFISHent/data_tables/b-test.coaxial.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,700 copying eFISHent/data_tables/b-test.tstacki23.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,702 copying eFISHent/data_tables/rna.int21.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,706 copying eFISHent/data_tables/b-test.int11.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,708 copying eFISHent/data_tables/rna.tstackm.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,710 copying eFISHent/data_tables/dnaint11.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,714 copying eFISHent/data_tables/dna.tstacki.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,716 copying eFISHent/data_tables/miscloop.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,718 copying eFISHent/data_tables/new_training_z_ave.scale.model -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,729 copying eFISHent/data_tables/dnatstackcoax.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,731 copying eFISHent/data_tables/design.RNA.Loops.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,734 copying eFISHent/data_tables/dna.int22.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,737 copying eFISHent/data_tables/miscloop.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,740 copying eFISHent/data_tables/rna.tstackh.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,742 copying eFISHent/data_tables/dnatstackh.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,744 copying eFISHent/data_tables/stackdr.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,747 copying eFISHent/data_tables/rna.loop.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,749 copying eFISHent/data_tables/m6A.tstacki1n.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,751 copying eFISHent/data_tables/m6A.tstack.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,753 copying eFISHent/data_tables/int11.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,756 copying eFISHent/data_tables/loop.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,759 copying eFISHent/data_tables/m6A.tstackm.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,761 copying eFISHent/data_tables/dnastack.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,764 copying eFISHent/data_tables/m6A.tstackh.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,766 copying eFISHent/data_tables/dna.triloop.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,768 copying eFISHent/data_tables/dnaint11.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,771 copying eFISHent/data_tables/rna.loop.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,773 copying eFISHent/data_tables/tstack.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,776 copying eFISHent/data_tables/triloop.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,778 copying eFISHent/data_tables/b-test.miscloop.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,780 copying eFISHent/data_tables/hexaloop.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,782 copying eFISHent/data_tables/design.DNA.Helices.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,786 copying eFISHent/data_tables/dna.int11.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,789 copying eFISHent/data_tables/pseudconst.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,791 copying eFISHent/data_tables/dnaint21.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,795 copying eFISHent/data_tables/tstackh.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,798 copying eFISHent/data_tables/b-test.tstacki.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,800 copying eFISHent/data_tables/b-test.dangle.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,804 copying eFISHent/data_tables/tstackh.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,807 copying eFISHent/data_tables/m6A.int11.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,811 copying eFISHent/data_tables/dna.coaxial.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,813 copying eFISHent/data_tables/m6A.tstackcoax.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,816 copying eFISHent/data_tables/coaxial.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,819 copying eFISHent/data_tables/rna.tstacki1n.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,821 copying eFISHent/data_tables/hexaloop.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,824 copying eFISHent/data_tables/average_ensemble_defect.model -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,830 copying eFISHent/data_tables/b-test.coaxstack.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,833 copying eFISHent/data_tables/coaxstack.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,837 copying eFISHent/data_tables/m6A.int21.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,841 copying eFISHent/data_tables/design.DNA.Loops.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,845 copying eFISHent/data_tables/dna.tstacki1n.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,848 copying eFISHent/data_tables/tstacki1n.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,851 copying eFISHent/data_tables/dnacoaxstack.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,855 copying eFISHent/data_tables/b-test.tstackcoax.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,858 copying eFISHent/data_tables/dnastack.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,861 copying eFISHent/data_tables/dna.tstacki23.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,863 copying eFISHent/data_tables/dna.tstack.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,866 copying eFISHent/data_tables/stackdr.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,869 copying eFISHent/data_tables/rna.triloop.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,871 copying eFISHent/data_tables/b-test.int11.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,875 copying eFISHent/data_tables/tstackm.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,878 copying eFISHent/data_tables/b-test.miscloop.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,881 copying eFISHent/data_tables/tstackm.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,884 copying eFISHent/data_tables/dna.dynalignmiscloop.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,887 copying eFISHent/data_tables/dnaloop.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,890 copying eFISHent/data_tables/rna.tstack.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,893 copying eFISHent/data_tables/m6A.specification.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,896 copying eFISHent/data_tables/b-test.tstackm.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,898 copying eFISHent/data_tables/rna.cov.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,928 copying eFISHent/data_tables/int22.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,931 copying eFISHent/data_tables/b-test.tstackcoax.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,934 copying eFISHent/data_tables/dnatstacki.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,936 copying eFISHent/data_tables/description.txt -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,938 copying eFISHent/data_tables/data_assemble_training_Multifind_predict_ensemble_z_final_svmformat.model -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,955 copying eFISHent/data_tables/rna.dangle.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,957 copying eFISHent/data_tables/b-test.tstackh.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,960 copying eFISHent/data_tables/tstacki.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,962 copying eFISHent/data_tables/rna.tstackh.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,964 copying eFISHent/data_tables/rna.tstacki1n.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,966 copying eFISHent/data_tables/coaxial.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,968 copying eFISHent/data_tables/stackdr.ds -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,971 copying eFISHent/data_tables/dnadangle.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,973 copying eFISHent/data_tables/m6A.coaxial.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,975 copying eFISHent/data_tables/dna.tloop.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,978 copying eFISHent/data_tables/b-test.hexaloop.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,980 copying eFISHent/data_tables/rna.hexaloop.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,982 copying eFISHent/data_tables/dna.int21.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,985 copying eFISHent/data_tables/rna.stack.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,987 copying eFISHent/data_tables/stack.dat -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,989 copying eFISHent/data_tables/dna.tstackm.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,991 copying eFISHent/data_tables/dna.dynalignmiscloop.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,994 copying eFISHent/data_tables/dangle.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:09,996 creating build/lib/eFISHent/data 2026-04-09T11:09:09,997 copying eFISHent/data/rDNA_45S_U13369.fasta -> build/lib/eFISHent/data 2026-04-09T11:09:10,001 copying eFISHent/data/imaging_risk_rnas.fasta -> build/lib/eFISHent/data 2026-04-09T11:09:10,003 copying eFISHent/data/alpha_satellite_consensus.fasta -> build/lib/eFISHent/data 2026-04-09T11:09:10,067 copying eFISHent/data_tables/m6A.int21.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:10,071 copying eFISHent/data_tables/m6A.int22.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:10,081 copying eFISHent/data_tables/new_training_z_ave.scale.model -> build/lib/eFISHent/data_tables 2026-04-09T11:09:10,092 copying eFISHent/data_tables/rna.cov.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:10,114 copying eFISHent/data_tables/rna.cov.dh -> build/lib/eFISHent/data_tables 2026-04-09T11:09:10,143 copying eFISHent/data_tables/rna.param_map.dg -> build/lib/eFISHent/data_tables 2026-04-09T11:09:10,289 installing to build/bdist.linux-armv7l/wheel 2026-04-09T11:09:10,289 running install 2026-04-09T11:09:10,313 running install_lib 2026-04-09T11:09:10,319 creating build/bdist.linux-armv7l/wheel 2026-04-09T11:09:10,321 creating build/bdist.linux-armv7l/wheel/eFISHent 2026-04-09T11:09:10,323 copying build/lib/eFISHent/basic_filtering.py -> build/bdist.linux-armv7l/wheel/./eFISHent 2026-04-09T11:09:10,325 copying build/lib/eFISHent/__init__.py -> build/bdist.linux-armv7l/wheel/./eFISHent 2026-04-09T11:09:10,328 copying build/lib/eFISHent/config.py -> build/bdist.linux-armv7l/wheel/./eFISHent 2026-04-09T11:09:10,330 copying build/lib/eFISHent/util.py -> build/bdist.linux-armv7l/wheel/./eFISHent 2026-04-09T11:09:10,333 copying build/lib/eFISHent/transcriptome_filter.py -> build/bdist.linux-armv7l/wheel/./eFISHent 2026-04-09T11:09:10,336 copying build/lib/eFISHent/kmers.py -> build/bdist.linux-armv7l/wheel/./eFISHent 2026-04-09T11:09:10,338 copying build/lib/eFISHent/Fold_linux -> build/bdist.linux-armv7l/wheel/./eFISHent 2026-04-09T11:09:10,366 copying build/lib/eFISHent/console.py -> build/bdist.linux-armv7l/wheel/./eFISHent 2026-04-09T11:09:10,369 creating build/bdist.linux-armv7l/wheel/eFISHent/data 2026-04-09T11:09:10,370 copying build/lib/eFISHent/data/rDNA_45S_U13369.fasta -> build/bdist.linux-armv7l/wheel/./eFISHent/data 2026-04-09T11:09:10,373 copying build/lib/eFISHent/data/imaging_risk_rnas.fasta -> build/bdist.linux-armv7l/wheel/./eFISHent/data 2026-04-09T11:09:10,375 copying build/lib/eFISHent/data/alpha_satellite_consensus.fasta -> build/bdist.linux-armv7l/wheel/./eFISHent/data 2026-04-09T11:09:10,377 copying build/lib/eFISHent/optimization.py -> build/bdist.linux-armv7l/wheel/./eFISHent 2026-04-09T11:09:10,380 copying build/lib/eFISHent/analyze.py -> build/bdist.linux-armv7l/wheel/./eFISHent 2026-04-09T11:09:10,383 copying build/lib/eFISHent/secondary_structure.py -> build/bdist.linux-armv7l/wheel/./eFISHent 2026-04-09T11:09:10,385 copying build/lib/eFISHent/luigi.cfg -> build/bdist.linux-armv7l/wheel/./eFISHent 2026-04-09T11:09:10,386 copying build/lib/eFISHent/prepare_sequence.py -> build/bdist.linux-armv7l/wheel/./eFISHent 2026-04-09T11:09:10,389 copying build/lib/eFISHent/rdna_filter.py -> build/bdist.linux-armv7l/wheel/./eFISHent 2026-04-09T11:09:10,391 copying build/lib/eFISHent/cleanup.py -> build/bdist.linux-armv7l/wheel/./eFISHent 2026-04-09T11:09:10,395 copying build/lib/eFISHent/Fold_osx -> build/bdist.linux-armv7l/wheel/./eFISHent 2026-04-09T11:09:10,422 copying build/lib/eFISHent/presets.py -> build/bdist.linux-armv7l/wheel/./eFISHent 2026-04-09T11:09:10,423 copying build/lib/eFISHent/indexing.py -> build/bdist.linux-armv7l/wheel/./eFISHent 2026-04-09T11:09:10,425 copying build/lib/eFISHent/prebuilt.py -> build/bdist.linux-armv7l/wheel/./eFISHent 2026-04-09T11:09:10,428 copying build/lib/eFISHent/__main__.py -> build/bdist.linux-armv7l/wheel/./eFISHent 2026-04-09T11:09:10,429 copying build/lib/eFISHent/gene_annotation.py -> build/bdist.linux-armv7l/wheel/./eFISHent 2026-04-09T11:09:10,431 copying build/lib/eFISHent/cli.py -> build/bdist.linux-armv7l/wheel/./eFISHent 2026-04-09T11:09:10,434 copying build/lib/eFISHent/constants.py -> build/bdist.linux-armv7l/wheel/./eFISHent 2026-04-09T11:09:10,436 copying build/lib/eFISHent/alignment.py -> build/bdist.linux-armv7l/wheel/./eFISHent 2026-04-09T11:09:10,439 copying build/lib/eFISHent/generate_probes.py -> build/bdist.linux-armv7l/wheel/./eFISHent 2026-04-09T11:09:10,445 creating build/bdist.linux-armv7l/wheel/eFISHent/data_tables 2026-04-09T11:09:10,447 copying build/lib/eFISHent/data_tables/rna.tstacki23.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,449 copying build/lib/eFISHent/data_tables/dna.tloop.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,450 copying build/lib/eFISHent/data_tables/dna.stack.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,452 copying build/lib/eFISHent/data_tables/rna.dynalignmiscloop.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,454 copying build/lib/eFISHent/data_tables/dna.hexaloop.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,456 copying build/lib/eFISHent/data_tables/dnatstacki23.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,458 copying build/lib/eFISHent/data_tables/b-test.int21.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,461 copying build/lib/eFISHent/data_tables/design.RNA.Helices.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,464 copying build/lib/eFISHent/data_tables/rna.miscloop.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,466 copying build/lib/eFISHent/data_tables/rna.hexaloop.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,468 copying build/lib/eFISHent/data_tables/dnatloop.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,470 copying build/lib/eFISHent/data_tables/dnatstack.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,472 copying build/lib/eFISHent/data_tables/dnatstacki.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,473 copying build/lib/eFISHent/data_tables/rna.cov.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,495 copying build/lib/eFISHent/data_tables/int22-exp.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,498 copying build/lib/eFISHent/data_tables/rna.specification.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,500 copying build/lib/eFISHent/data_tables/helixdr.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,502 copying build/lib/eFISHent/data_tables/m6A.miscloop.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,503 copying build/lib/eFISHent/data_tables/dna.tstackcoax.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,505 copying build/lib/eFISHent/data_tables/dnahexaloop.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,507 copying build/lib/eFISHent/data_tables/m6A.tstacki23.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,509 copying build/lib/eFISHent/data_tables/m6A.tstacki.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,511 copying build/lib/eFISHent/data_tables/dnatriloop.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,513 copying build/lib/eFISHent/data_tables/dnatloop.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,515 copying build/lib/eFISHent/data_tables/m6A.int22.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,520 copying build/lib/eFISHent/data_tables/dna.miscloop.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,522 copying build/lib/eFISHent/data_tables/rna.int22.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,525 copying build/lib/eFISHent/data_tables/dna.tstacki1n.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,527 copying build/lib/eFISHent/data_tables/dnacoaxial.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,529 copying build/lib/eFISHent/data_tables/tstackcoax.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,531 copying build/lib/eFISHent/data_tables/b-test.int22.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,537 copying build/lib/eFISHent/data_tables/rna.coaxstack.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,539 copying build/lib/eFISHent/data_tables/b-test.int21.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,543 copying build/lib/eFISHent/data_tables/rna.coaxial.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,545 copying build/lib/eFISHent/data_tables/dna.tstackh.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,546 copying build/lib/eFISHent/data_tables/dnatstackh.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,548 copying build/lib/eFISHent/data_tables/b-test.tloop.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,550 copying build/lib/eFISHent/data_tables/m6A.tloop.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,552 copying build/lib/eFISHent/data_tables/rna.tstacki23.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,554 copying build/lib/eFISHent/data_tables/tstacki1n.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,556 copying build/lib/eFISHent/data_tables/rna.tstackm.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,558 copying build/lib/eFISHent/data_tables/dnatstackcoax.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,559 copying build/lib/eFISHent/data_tables/tstacki.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,561 copying build/lib/eFISHent/data_tables/dnatstacki1n.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,563 copying build/lib/eFISHent/data_tables/dna.int21.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,566 copying build/lib/eFISHent/data_tables/b-test.tstacki.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,568 copying build/lib/eFISHent/data_tables/b-test.coaxial.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,569 copying build/lib/eFISHent/data_tables/stack.ds -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,572 copying build/lib/eFISHent/data_tables/dnatstacki1n.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,573 copying build/lib/eFISHent/data_tables/b-test.tstack.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,575 copying build/lib/eFISHent/data_tables/dnadangle.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,577 copying build/lib/eFISHent/data_tables/dna.tstackm.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,579 copying build/lib/eFISHent/data_tables/b-test.int22.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,585 copying build/lib/eFISHent/data_tables/rna.int11.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,587 copying build/lib/eFISHent/data_tables/m6A.hexaloop.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,589 copying build/lib/eFISHent/data_tables/rna.tstacki.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,591 copying build/lib/eFISHent/data_tables/dna.dangle.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,593 copying build/lib/eFISHent/data_tables/dnamiscloop.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,595 copying build/lib/eFISHent/data_tables/loop.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,597 copying build/lib/eFISHent/data_tables/rna.miscloop.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,599 copying build/lib/eFISHent/data_tables/b-test.triloop.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,601 copying build/lib/eFISHent/data_tables/dnatstack.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,603 copying build/lib/eFISHent/data_tables/dnatstackm.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,605 copying build/lib/eFISHent/data_tables/dna.dangle.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,608 copying build/lib/eFISHent/data_tables/rna.int21.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,612 copying build/lib/eFISHent/data_tables/new_training_z_std.scale.model -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,627 copying build/lib/eFISHent/data_tables/rna.tstackcoax.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,630 copying build/lib/eFISHent/data_tables/rna.triloop.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,632 copying build/lib/eFISHent/data_tables/fam_hmm_pars.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,635 copying build/lib/eFISHent/data_tables/b-test.tstack.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,638 copying build/lib/eFISHent/data_tables/tstack.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,640 copying build/lib/eFISHent/data_tables/rna.coaxstack.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,643 copying build/lib/eFISHent/data_tables/dna.tstacki.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,645 copying build/lib/eFISHent/data_tables/tloop.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,647 copying build/lib/eFISHent/data_tables/b-test.triloop.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,649 copying build/lib/eFISHent/data_tables/int21.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,653 copying build/lib/eFISHent/data_tables/b-test.specification.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,655 copying build/lib/eFISHent/data_tables/dnamiscloop.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,657 copying build/lib/eFISHent/data_tables/b-test.tstacki1n.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,660 copying build/lib/eFISHent/data_tables/b-test.tstackh.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,662 copying build/lib/eFISHent/data_tables/m6A.loop.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,664 copying build/lib/eFISHent/data_tables/tstacki23.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,666 copying build/lib/eFISHent/data_tables/rna.tstacki.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,669 copying build/lib/eFISHent/data_tables/int22.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,673 copying build/lib/eFISHent/data_tables/triloop.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,676 copying build/lib/eFISHent/data_tables/dnatstacki23.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,678 copying build/lib/eFISHent/data_tables/rna.stack.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,681 copying build/lib/eFISHent/data_tables/dnadynalignmiscloop.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,683 copying build/lib/eFISHent/data_tables/dnatriloop.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,685 copying build/lib/eFISHent/data_tables/dnahexaloop.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,687 copying build/lib/eFISHent/data_tables/m6A.stack.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,690 copying build/lib/eFISHent/data_tables/dna.triloop.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,692 copying build/lib/eFISHent/data_tables/b-test.dynalignmiscloop.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,694 copying build/lib/eFISHent/data_tables/rna.tstackcoax.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,697 copying build/lib/eFISHent/data_tables/m6A.triloop.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,699 copying build/lib/eFISHent/data_tables/dnaint21.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,703 copying build/lib/eFISHent/data_tables/dnaloop.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,705 copying build/lib/eFISHent/data_tables/helix.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,707 copying build/lib/eFISHent/data_tables/dynalignmiscloop.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,709 copying build/lib/eFISHent/data_tables/int21.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,712 copying build/lib/eFISHent/data_tables/b-test.tloop.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,713 copying build/lib/eFISHent/data_tables/dangle.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,716 copying build/lib/eFISHent/data_tables/dna.tstackcoax.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,717 copying build/lib/eFISHent/data_tables/dna.tstackh.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,719 copying build/lib/eFISHent/data_tables/b-test.loop.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,721 copying build/lib/eFISHent/data_tables/dnaint22.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,724 copying build/lib/eFISHent/data_tables/m6A.dangle.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,726 copying build/lib/eFISHent/data_tables/rna.param_map.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,838 copying build/lib/eFISHent/data_tables/coaxstack.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,841 copying build/lib/eFISHent/data_tables/b-test.tstacki1n.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,842 copying build/lib/eFISHent/data_tables/b-test.stack.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,844 copying build/lib/eFISHent/data_tables/dna.coaxstack.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,846 copying build/lib/eFISHent/data_tables/rna.tstack.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,848 copying build/lib/eFISHent/data_tables/dnadynalignmiscloop.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,850 copying build/lib/eFISHent/data_tables/dna.stack.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,851 copying build/lib/eFISHent/data_tables/dna.int11.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,854 copying build/lib/eFISHent/data_tables/rna.int11.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,856 copying build/lib/eFISHent/data_tables/dnatstackm.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,858 copying build/lib/eFISHent/data_tables/dna.coaxial.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,860 copying build/lib/eFISHent/data_tables/std_ensemble_defect.model -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,863 copying build/lib/eFISHent/data_tables/autodetect.txt -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,865 copying build/lib/eFISHent/data_tables/dna.loop.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,866 copying build/lib/eFISHent/data_tables/b-test.dangle.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,869 copying build/lib/eFISHent/data_tables/dna.int22.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,872 copying build/lib/eFISHent/data_tables/dna.miscloop.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,874 copying build/lib/eFISHent/data_tables/b-test.tstackm.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,877 copying build/lib/eFISHent/data_tables/tstackcoax.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,879 copying build/lib/eFISHent/data_tables/dna.tstacki23.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,881 copying build/lib/eFISHent/data_tables/dna.specification.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,883 copying build/lib/eFISHent/data_tables/dnacoaxstack.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,886 copying build/lib/eFISHent/data_tables/b-test.stack.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,888 copying build/lib/eFISHent/data_tables/b-test.hexaloop.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,890 copying build/lib/eFISHent/data_tables/dna.hexaloop.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,892 copying build/lib/eFISHent/data_tables/b-test.coaxstack.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,894 copying build/lib/eFISHent/data_tables/rna.int22.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,898 copying build/lib/eFISHent/data_tables/b-test.tstacki23.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,900 copying build/lib/eFISHent/data_tables/rna.coaxial.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,902 copying build/lib/eFISHent/data_tables/tloop.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,904 copying build/lib/eFISHent/data_tables/tstacki23.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,906 copying build/lib/eFISHent/data_tables/dnacoaxial.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,908 copying build/lib/eFISHent/data_tables/dna.coaxstack.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,910 copying build/lib/eFISHent/data_tables/rna.tloop.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,912 copying build/lib/eFISHent/data_tables/dna.tstack.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,914 copying build/lib/eFISHent/data_tables/rna.dangle.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,917 copying build/lib/eFISHent/data_tables/stack.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,919 copying build/lib/eFISHent/data_tables/int11.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,922 copying build/lib/eFISHent/data_tables/dnaint22.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,925 copying build/lib/eFISHent/data_tables/rna.tloop.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,927 copying build/lib/eFISHent/data_tables/m6A.coaxstack.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,930 copying build/lib/eFISHent/data_tables/dna.loop.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,932 copying build/lib/eFISHent/data_tables/b-test.coaxial.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,934 copying build/lib/eFISHent/data_tables/b-test.tstacki23.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,937 copying build/lib/eFISHent/data_tables/rna.int21.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,940 copying build/lib/eFISHent/data_tables/b-test.int11.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,943 copying build/lib/eFISHent/data_tables/rna.tstackm.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,945 copying build/lib/eFISHent/data_tables/dnaint11.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,948 copying build/lib/eFISHent/data_tables/dna.tstacki.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,950 copying build/lib/eFISHent/data_tables/miscloop.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,952 copying build/lib/eFISHent/data_tables/new_training_z_ave.scale.model -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,962 copying build/lib/eFISHent/data_tables/dnatstackcoax.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,964 copying build/lib/eFISHent/data_tables/design.RNA.Loops.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,967 copying build/lib/eFISHent/data_tables/dna.int22.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,971 copying build/lib/eFISHent/data_tables/miscloop.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,973 copying build/lib/eFISHent/data_tables/rna.tstackh.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,975 copying build/lib/eFISHent/data_tables/dnatstackh.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,977 copying build/lib/eFISHent/data_tables/stackdr.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,980 copying build/lib/eFISHent/data_tables/rna.loop.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,982 copying build/lib/eFISHent/data_tables/m6A.tstacki1n.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,984 copying build/lib/eFISHent/data_tables/m6A.tstack.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,986 copying build/lib/eFISHent/data_tables/int11.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,989 copying build/lib/eFISHent/data_tables/loop.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,991 copying build/lib/eFISHent/data_tables/m6A.tstackm.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,993 copying build/lib/eFISHent/data_tables/dnastack.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,996 copying build/lib/eFISHent/data_tables/m6A.tstackh.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:10,998 copying build/lib/eFISHent/data_tables/dna.triloop.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,000 copying build/lib/eFISHent/data_tables/dnaint11.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,003 copying build/lib/eFISHent/data_tables/rna.loop.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,006 copying build/lib/eFISHent/data_tables/tstack.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,008 copying build/lib/eFISHent/data_tables/triloop.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,010 copying build/lib/eFISHent/data_tables/b-test.miscloop.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,012 copying build/lib/eFISHent/data_tables/hexaloop.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,014 copying build/lib/eFISHent/data_tables/design.DNA.Helices.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,018 copying build/lib/eFISHent/data_tables/dna.int11.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,020 copying build/lib/eFISHent/data_tables/pseudconst.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,023 copying build/lib/eFISHent/data_tables/dnaint21.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,026 copying build/lib/eFISHent/data_tables/tstackh.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,028 copying build/lib/eFISHent/data_tables/b-test.tstacki.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,031 copying build/lib/eFISHent/data_tables/b-test.dangle.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,033 copying build/lib/eFISHent/data_tables/tstackh.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,036 copying build/lib/eFISHent/data_tables/m6A.int11.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,038 copying build/lib/eFISHent/data_tables/dna.coaxial.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,040 copying build/lib/eFISHent/data_tables/m6A.tstackcoax.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,042 copying build/lib/eFISHent/data_tables/coaxial.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,045 copying build/lib/eFISHent/data_tables/rna.tstacki1n.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,047 copying build/lib/eFISHent/data_tables/hexaloop.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,049 copying build/lib/eFISHent/data_tables/average_ensemble_defect.model -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,053 copying build/lib/eFISHent/data_tables/b-test.coaxstack.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,055 copying build/lib/eFISHent/data_tables/coaxstack.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,057 copying build/lib/eFISHent/data_tables/m6A.int21.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,061 copying build/lib/eFISHent/data_tables/design.DNA.Loops.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,063 copying build/lib/eFISHent/data_tables/dna.tstacki1n.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,065 copying build/lib/eFISHent/data_tables/tstacki1n.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,067 copying build/lib/eFISHent/data_tables/dnacoaxstack.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,069 copying build/lib/eFISHent/data_tables/b-test.tstackcoax.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,071 copying build/lib/eFISHent/data_tables/dnastack.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,073 copying build/lib/eFISHent/data_tables/dna.tstacki23.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,075 copying build/lib/eFISHent/data_tables/dna.tstack.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,077 copying build/lib/eFISHent/data_tables/stackdr.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,079 copying build/lib/eFISHent/data_tables/rna.triloop.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,081 copying build/lib/eFISHent/data_tables/b-test.int11.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,084 copying build/lib/eFISHent/data_tables/tstackm.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,086 copying build/lib/eFISHent/data_tables/b-test.miscloop.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,088 copying build/lib/eFISHent/data_tables/tstackm.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,090 copying build/lib/eFISHent/data_tables/dna.dynalignmiscloop.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,092 copying build/lib/eFISHent/data_tables/dnaloop.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,094 copying build/lib/eFISHent/data_tables/rna.tstack.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,096 copying build/lib/eFISHent/data_tables/m6A.specification.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,098 copying build/lib/eFISHent/data_tables/b-test.tstackm.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,100 copying build/lib/eFISHent/data_tables/rna.cov.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,124 copying build/lib/eFISHent/data_tables/int22.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,128 copying build/lib/eFISHent/data_tables/b-test.tstackcoax.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,130 copying build/lib/eFISHent/data_tables/dnatstacki.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,132 copying build/lib/eFISHent/data_tables/description.txt -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,133 copying build/lib/eFISHent/data_tables/data_assemble_training_Multifind_predict_ensemble_z_final_svmformat.model -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,141 copying build/lib/eFISHent/data_tables/rna.dangle.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,143 copying build/lib/eFISHent/data_tables/b-test.tstackh.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,145 copying build/lib/eFISHent/data_tables/tstacki.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,146 copying build/lib/eFISHent/data_tables/rna.tstackh.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,148 copying build/lib/eFISHent/data_tables/rna.tstacki1n.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,150 copying build/lib/eFISHent/data_tables/coaxial.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,153 copying build/lib/eFISHent/data_tables/stackdr.ds -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,155 copying build/lib/eFISHent/data_tables/dnadangle.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,157 copying build/lib/eFISHent/data_tables/m6A.coaxial.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,159 copying build/lib/eFISHent/data_tables/dna.tloop.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,160 copying build/lib/eFISHent/data_tables/b-test.hexaloop.dg -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,162 copying build/lib/eFISHent/data_tables/rna.hexaloop.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,164 copying build/lib/eFISHent/data_tables/dna.int21.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,167 copying build/lib/eFISHent/data_tables/rna.stack.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,169 copying build/lib/eFISHent/data_tables/stack.dat -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,171 copying build/lib/eFISHent/data_tables/dna.tstackm.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,172 copying build/lib/eFISHent/data_tables/dna.dynalignmiscloop.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,174 copying build/lib/eFISHent/data_tables/dangle.dh -> build/bdist.linux-armv7l/wheel/./eFISHent/data_tables 2026-04-09T11:09:11,176 running install_egg_info 2026-04-09T11:09:11,181 Copying eFISHent.egg-info to build/bdist.linux-armv7l/wheel/./eFISHent-0.0.14-py3.11.egg-info 2026-04-09T11:09:11,194 running install_scripts 2026-04-09T11:09:11,202 creating build/bdist.linux-armv7l/wheel/efishent-0.0.14.dist-info/WHEEL 2026-04-09T11:09:11,205 creating '/tmp/pip-wheel-eg4vxvp9/.tmp-ya_ntky7/efishent-0.0.14-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-04-09T11:09:11,494 adding 'eFISHent/Fold_linux' 2026-04-09T11:09:11,773 adding 'eFISHent/Fold_osx' 2026-04-09T11:09:11,785 adding 'eFISHent/__init__.py' 2026-04-09T11:09:11,786 adding 'eFISHent/__main__.py' 2026-04-09T11:09:11,790 adding 'eFISHent/alignment.py' 2026-04-09T11:09:11,793 adding 'eFISHent/analyze.py' 2026-04-09T11:09:11,795 adding 'eFISHent/basic_filtering.py' 2026-04-09T11:09:11,800 adding 'eFISHent/cleanup.py' 2026-04-09T11:09:11,805 adding 'eFISHent/cli.py' 2026-04-09T11:09:11,807 adding 'eFISHent/config.py' 2026-04-09T11:09:11,811 adding 'eFISHent/console.py' 2026-04-09T11:09:11,812 adding 'eFISHent/constants.py' 2026-04-09T11:09:11,814 adding 'eFISHent/gene_annotation.py' 2026-04-09T11:09:11,816 adding 'eFISHent/generate_probes.py' 2026-04-09T11:09:11,817 adding 'eFISHent/indexing.py' 2026-04-09T11:09:11,819 adding 'eFISHent/kmers.py' 2026-04-09T11:09:11,820 adding 'eFISHent/luigi.cfg' 2026-04-09T11:09:11,823 adding 'eFISHent/optimization.py' 2026-04-09T11:09:11,825 adding 'eFISHent/prebuilt.py' 2026-04-09T11:09:11,827 adding 'eFISHent/prepare_sequence.py' 2026-04-09T11:09:11,828 adding 'eFISHent/presets.py' 2026-04-09T11:09:11,830 adding 'eFISHent/rdna_filter.py' 2026-04-09T11:09:11,831 adding 'eFISHent/secondary_structure.py' 2026-04-09T11:09:11,833 adding 'eFISHent/transcriptome_filter.py' 2026-04-09T11:09:11,835 adding 'eFISHent/util.py' 2026-04-09T11:09:11,837 adding 'eFISHent/data/alpha_satellite_consensus.fasta' 2026-04-09T11:09:11,839 adding 'eFISHent/data/imaging_risk_rnas.fasta' 2026-04-09T11:09:11,858 adding 'eFISHent/data/rDNA_45S_U13369.fasta' 2026-04-09T11:09:11,864 adding 'eFISHent/data_tables/autodetect.txt' 2026-04-09T11:09:11,882 adding 'eFISHent/data_tables/average_ensemble_defect.model' 2026-04-09T11:09:11,884 adding 'eFISHent/data_tables/b-test.coaxial.dg' 2026-04-09T11:09:11,885 adding 'eFISHent/data_tables/b-test.coaxial.dh' 2026-04-09T11:09:11,886 adding 'eFISHent/data_tables/b-test.coaxstack.dg' 2026-04-09T11:09:11,887 adding 'eFISHent/data_tables/b-test.coaxstack.dh' 2026-04-09T11:09:11,889 adding 'eFISHent/data_tables/b-test.dangle.dg' 2026-04-09T11:09:11,890 adding 'eFISHent/data_tables/b-test.dangle.dh' 2026-04-09T11:09:11,891 adding 'eFISHent/data_tables/b-test.dynalignmiscloop.dg' 2026-04-09T11:09:11,892 adding 'eFISHent/data_tables/b-test.hexaloop.dg' 2026-04-09T11:09:11,893 adding 'eFISHent/data_tables/b-test.hexaloop.dh' 2026-04-09T11:09:11,895 adding 'eFISHent/data_tables/b-test.int11.dg' 2026-04-09T11:09:11,897 adding 'eFISHent/data_tables/b-test.int11.dh' 2026-04-09T11:09:11,901 adding 'eFISHent/data_tables/b-test.int21.dg' 2026-04-09T11:09:11,904 adding 'eFISHent/data_tables/b-test.int21.dh' 2026-04-09T11:09:11,917 adding 'eFISHent/data_tables/b-test.int22.dg' 2026-04-09T11:09:11,933 adding 'eFISHent/data_tables/b-test.int22.dh' 2026-04-09T11:09:11,936 adding 'eFISHent/data_tables/b-test.loop.dg' 2026-04-09T11:09:11,937 adding 'eFISHent/data_tables/b-test.miscloop.dg' 2026-04-09T11:09:11,939 adding 'eFISHent/data_tables/b-test.miscloop.dh' 2026-04-09T11:09:11,940 adding 'eFISHent/data_tables/b-test.specification.dat' 2026-04-09T11:09:11,941 adding 'eFISHent/data_tables/b-test.stack.dg' 2026-04-09T11:09:11,943 adding 'eFISHent/data_tables/b-test.stack.dh' 2026-04-09T11:09:11,944 adding 'eFISHent/data_tables/b-test.tloop.dg' 2026-04-09T11:09:11,945 adding 'eFISHent/data_tables/b-test.tloop.dh' 2026-04-09T11:09:11,946 adding 'eFISHent/data_tables/b-test.triloop.dg' 2026-04-09T11:09:11,947 adding 'eFISHent/data_tables/b-test.triloop.dh' 2026-04-09T11:09:11,949 adding 'eFISHent/data_tables/b-test.tstack.dg' 2026-04-09T11:09:11,950 adding 'eFISHent/data_tables/b-test.tstack.dh' 2026-04-09T11:09:11,951 adding 'eFISHent/data_tables/b-test.tstackcoax.dg' 2026-04-09T11:09:11,952 adding 'eFISHent/data_tables/b-test.tstackcoax.dh' 2026-04-09T11:09:11,954 adding 'eFISHent/data_tables/b-test.tstackh.dg' 2026-04-09T11:09:11,955 adding 'eFISHent/data_tables/b-test.tstackh.dh' 2026-04-09T11:09:11,956 adding 'eFISHent/data_tables/b-test.tstacki.dg' 2026-04-09T11:09:11,957 adding 'eFISHent/data_tables/b-test.tstacki.dh' 2026-04-09T11:09:11,958 adding 'eFISHent/data_tables/b-test.tstacki1n.dg' 2026-04-09T11:09:11,960 adding 'eFISHent/data_tables/b-test.tstacki1n.dh' 2026-04-09T11:09:11,961 adding 'eFISHent/data_tables/b-test.tstacki23.dg' 2026-04-09T11:09:11,962 adding 'eFISHent/data_tables/b-test.tstacki23.dh' 2026-04-09T11:09:11,963 adding 'eFISHent/data_tables/b-test.tstackm.dg' 2026-04-09T11:09:11,965 adding 'eFISHent/data_tables/b-test.tstackm.dh' 2026-04-09T11:09:11,966 adding 'eFISHent/data_tables/coaxial.dat' 2026-04-09T11:09:11,967 adding 'eFISHent/data_tables/coaxial.dh' 2026-04-09T11:09:11,969 adding 'eFISHent/data_tables/coaxstack.dat' 2026-04-09T11:09:11,970 adding 'eFISHent/data_tables/coaxstack.dh' 2026-04-09T11:09:11,971 adding 'eFISHent/data_tables/dangle.dat' 2026-04-09T11:09:11,973 adding 'eFISHent/data_tables/dangle.dh' 2026-04-09T11:09:12,028 adding 'eFISHent/data_tables/data_assemble_training_Multifind_predict_ensemble_z_final_svmformat.model' 2026-04-09T11:09:12,031 adding 'eFISHent/data_tables/description.txt' 2026-04-09T11:09:12,042 adding 'eFISHent/data_tables/design.DNA.Helices.dat' 2026-04-09T11:09:12,049 adding 'eFISHent/data_tables/design.DNA.Loops.dat' 2026-04-09T11:09:12,059 adding 'eFISHent/data_tables/design.RNA.Helices.dat' 2026-04-09T11:09:12,066 adding 'eFISHent/data_tables/design.RNA.Loops.dat' 2026-04-09T11:09:12,067 adding 'eFISHent/data_tables/dna.coaxial.dg' 2026-04-09T11:09:12,069 adding 'eFISHent/data_tables/dna.coaxial.dh' 2026-04-09T11:09:12,070 adding 'eFISHent/data_tables/dna.coaxstack.dg' 2026-04-09T11:09:12,071 adding 'eFISHent/data_tables/dna.coaxstack.dh' 2026-04-09T11:09:12,073 adding 'eFISHent/data_tables/dna.dangle.dg' 2026-04-09T11:09:12,074 adding 'eFISHent/data_tables/dna.dangle.dh' 2026-04-09T11:09:12,075 adding 'eFISHent/data_tables/dna.dynalignmiscloop.dg' 2026-04-09T11:09:12,077 adding 'eFISHent/data_tables/dna.dynalignmiscloop.dh' 2026-04-09T11:09:12,078 adding 'eFISHent/data_tables/dna.hexaloop.dg' 2026-04-09T11:09:12,079 adding 'eFISHent/data_tables/dna.hexaloop.dh' 2026-04-09T11:09:12,080 adding 'eFISHent/data_tables/dna.int11.dg' 2026-04-09T11:09:12,082 adding 'eFISHent/data_tables/dna.int11.dh' 2026-04-09T11:09:12,085 adding 'eFISHent/data_tables/dna.int21.dg' 2026-04-09T11:09:12,087 adding 'eFISHent/data_tables/dna.int21.dh' 2026-04-09T11:09:12,091 adding 'eFISHent/data_tables/dna.int22.dg' 2026-04-09T11:09:12,095 adding 'eFISHent/data_tables/dna.int22.dh' 2026-04-09T11:09:12,096 adding 'eFISHent/data_tables/dna.loop.dg' 2026-04-09T11:09:12,098 adding 'eFISHent/data_tables/dna.loop.dh' 2026-04-09T11:09:12,099 adding 'eFISHent/data_tables/dna.miscloop.dg' 2026-04-09T11:09:12,100 adding 'eFISHent/data_tables/dna.miscloop.dh' 2026-04-09T11:09:12,101 adding 'eFISHent/data_tables/dna.specification.dat' 2026-04-09T11:09:12,103 adding 'eFISHent/data_tables/dna.stack.dg' 2026-04-09T11:09:12,104 adding 'eFISHent/data_tables/dna.stack.dh' 2026-04-09T11:09:12,105 adding 'eFISHent/data_tables/dna.tloop.dg' 2026-04-09T11:09:12,106 adding 'eFISHent/data_tables/dna.tloop.dh' 2026-04-09T11:09:12,107 adding 'eFISHent/data_tables/dna.triloop.dg' 2026-04-09T11:09:12,109 adding 'eFISHent/data_tables/dna.triloop.dh' 2026-04-09T11:09:12,110 adding 'eFISHent/data_tables/dna.tstack.dg' 2026-04-09T11:09:12,111 adding 'eFISHent/data_tables/dna.tstack.dh' 2026-04-09T11:09:12,112 adding 'eFISHent/data_tables/dna.tstackcoax.dg' 2026-04-09T11:09:12,114 adding 'eFISHent/data_tables/dna.tstackcoax.dh' 2026-04-09T11:09:12,115 adding 'eFISHent/data_tables/dna.tstackh.dg' 2026-04-09T11:09:12,116 adding 'eFISHent/data_tables/dna.tstackh.dh' 2026-04-09T11:09:12,117 adding 'eFISHent/data_tables/dna.tstacki.dg' 2026-04-09T11:09:12,119 adding 'eFISHent/data_tables/dna.tstacki.dh' 2026-04-09T11:09:12,120 adding 'eFISHent/data_tables/dna.tstacki1n.dg' 2026-04-09T11:09:12,121 adding 'eFISHent/data_tables/dna.tstacki1n.dh' 2026-04-09T11:09:12,122 adding 'eFISHent/data_tables/dna.tstacki23.dg' 2026-04-09T11:09:12,124 adding 'eFISHent/data_tables/dna.tstacki23.dh' 2026-04-09T11:09:12,125 adding 'eFISHent/data_tables/dna.tstackm.dg' 2026-04-09T11:09:12,126 adding 'eFISHent/data_tables/dna.tstackm.dh' 2026-04-09T11:09:12,128 adding 'eFISHent/data_tables/dnacoaxial.dat' 2026-04-09T11:09:12,129 adding 'eFISHent/data_tables/dnacoaxial.dh' 2026-04-09T11:09:12,130 adding 'eFISHent/data_tables/dnacoaxstack.dat' 2026-04-09T11:09:12,132 adding 'eFISHent/data_tables/dnacoaxstack.dh' 2026-04-09T11:09:12,133 adding 'eFISHent/data_tables/dnadangle.dat' 2026-04-09T11:09:12,134 adding 'eFISHent/data_tables/dnadangle.dh' 2026-04-09T11:09:12,135 adding 'eFISHent/data_tables/dnadynalignmiscloop.dat' 2026-04-09T11:09:12,136 adding 'eFISHent/data_tables/dnadynalignmiscloop.dh' 2026-04-09T11:09:12,137 adding 'eFISHent/data_tables/dnahexaloop.dat' 2026-04-09T11:09:12,138 adding 'eFISHent/data_tables/dnahexaloop.dh' 2026-04-09T11:09:12,140 adding 'eFISHent/data_tables/dnaint11.dat' 2026-04-09T11:09:12,141 adding 'eFISHent/data_tables/dnaint11.dh' 2026-04-09T11:09:12,144 adding 'eFISHent/data_tables/dnaint21.dat' 2026-04-09T11:09:12,147 adding 'eFISHent/data_tables/dnaint21.dh' 2026-04-09T11:09:12,152 adding 'eFISHent/data_tables/dnaint22.dat' 2026-04-09T11:09:12,155 adding 'eFISHent/data_tables/dnaint22.dh' 2026-04-09T11:09:12,157 adding 'eFISHent/data_tables/dnaloop.dat' 2026-04-09T11:09:12,158 adding 'eFISHent/data_tables/dnaloop.dh' 2026-04-09T11:09:12,159 adding 'eFISHent/data_tables/dnamiscloop.dat' 2026-04-09T11:09:12,160 adding 'eFISHent/data_tables/dnamiscloop.dh' 2026-04-09T11:09:12,162 adding 'eFISHent/data_tables/dnastack.dat' 2026-04-09T11:09:12,163 adding 'eFISHent/data_tables/dnastack.dh' 2026-04-09T11:09:12,164 adding 'eFISHent/data_tables/dnatloop.dat' 2026-04-09T11:09:12,166 adding 'eFISHent/data_tables/dnatloop.dh' 2026-04-09T11:09:12,167 adding 'eFISHent/data_tables/dnatriloop.dat' 2026-04-09T11:09:12,168 adding 'eFISHent/data_tables/dnatriloop.dh' 2026-04-09T11:09:12,169 adding 'eFISHent/data_tables/dnatstack.dat' 2026-04-09T11:09:12,171 adding 'eFISHent/data_tables/dnatstack.dh' 2026-04-09T11:09:12,172 adding 'eFISHent/data_tables/dnatstackcoax.dat' 2026-04-09T11:09:12,173 adding 'eFISHent/data_tables/dnatstackcoax.dh' 2026-04-09T11:09:12,175 adding 'eFISHent/data_tables/dnatstackh.dat' 2026-04-09T11:09:12,176 adding 'eFISHent/data_tables/dnatstackh.dh' 2026-04-09T11:09:12,177 adding 'eFISHent/data_tables/dnatstacki.dat' 2026-04-09T11:09:12,179 adding 'eFISHent/data_tables/dnatstacki.dh' 2026-04-09T11:09:12,180 adding 'eFISHent/data_tables/dnatstacki1n.dat' 2026-04-09T11:09:12,182 adding 'eFISHent/data_tables/dnatstacki1n.dh' 2026-04-09T11:09:12,183 adding 'eFISHent/data_tables/dnatstacki23.dat' 2026-04-09T11:09:12,185 adding 'eFISHent/data_tables/dnatstacki23.dh' 2026-04-09T11:09:12,186 adding 'eFISHent/data_tables/dnatstackm.dat' 2026-04-09T11:09:12,188 adding 'eFISHent/data_tables/dnatstackm.dh' 2026-04-09T11:09:12,189 adding 'eFISHent/data_tables/dynalignmiscloop.dat' 2026-04-09T11:09:12,191 adding 'eFISHent/data_tables/fam_hmm_pars.dat' 2026-04-09T11:09:12,192 adding 'eFISHent/data_tables/helix.dat' 2026-04-09T11:09:12,193 adding 'eFISHent/data_tables/helixdr.dat' 2026-04-09T11:09:12,195 adding 'eFISHent/data_tables/hexaloop.dat' 2026-04-09T11:09:12,196 adding 'eFISHent/data_tables/hexaloop.dh' 2026-04-09T11:09:12,198 adding 'eFISHent/data_tables/int11.dat' 2026-04-09T11:09:12,200 adding 'eFISHent/data_tables/int11.dh' 2026-04-09T11:09:12,202 adding 'eFISHent/data_tables/int21.dat' 2026-04-09T11:09:12,205 adding 'eFISHent/data_tables/int21.dh' 2026-04-09T11:09:12,208 adding 'eFISHent/data_tables/int22-exp.dh' 2026-04-09T11:09:12,215 adding 'eFISHent/data_tables/int22.dat' 2026-04-09T11:09:12,224 adding 'eFISHent/data_tables/int22.dh' 2026-04-09T11:09:12,226 adding 'eFISHent/data_tables/loop.dat' 2026-04-09T11:09:12,227 adding 'eFISHent/data_tables/loop.dh' 2026-04-09T11:09:12,229 adding 'eFISHent/data_tables/m6A.coaxial.dg' 2026-04-09T11:09:12,231 adding 'eFISHent/data_tables/m6A.coaxstack.dg' 2026-04-09T11:09:12,232 adding 'eFISHent/data_tables/m6A.dangle.dg' 2026-04-09T11:09:12,234 adding 'eFISHent/data_tables/m6A.hexaloop.dg' 2026-04-09T11:09:12,236 adding 'eFISHent/data_tables/m6A.int11.dg' 2026-04-09T11:09:12,239 adding 'eFISHent/data_tables/m6A.int21.dg' 2026-04-09T11:09:12,254 adding 'eFISHent/data_tables/m6A.int22.dg' 2026-04-09T11:09:12,257 adding 'eFISHent/data_tables/m6A.loop.dg' 2026-04-09T11:09:12,258 adding 'eFISHent/data_tables/m6A.miscloop.dg' 2026-04-09T11:09:12,260 adding 'eFISHent/data_tables/m6A.specification.dat' 2026-04-09T11:09:12,261 adding 'eFISHent/data_tables/m6A.stack.dg' 2026-04-09T11:09:12,262 adding 'eFISHent/data_tables/m6A.tloop.dg' 2026-04-09T11:09:12,264 adding 'eFISHent/data_tables/m6A.triloop.dg' 2026-04-09T11:09:12,265 adding 'eFISHent/data_tables/m6A.tstack.dg' 2026-04-09T11:09:12,267 adding 'eFISHent/data_tables/m6A.tstackcoax.dg' 2026-04-09T11:09:12,268 adding 'eFISHent/data_tables/m6A.tstackh.dg' 2026-04-09T11:09:12,269 adding 'eFISHent/data_tables/m6A.tstacki.dg' 2026-04-09T11:09:12,271 adding 'eFISHent/data_tables/m6A.tstacki1n.dg' 2026-04-09T11:09:12,272 adding 'eFISHent/data_tables/m6A.tstacki23.dg' 2026-04-09T11:09:12,273 adding 'eFISHent/data_tables/m6A.tstackm.dg' 2026-04-09T11:09:12,275 adding 'eFISHent/data_tables/miscloop.dat' 2026-04-09T11:09:12,276 adding 'eFISHent/data_tables/miscloop.dh' 2026-04-09T11:09:12,309 adding 'eFISHent/data_tables/new_training_z_ave.scale.model' 2026-04-09T11:09:12,350 adding 'eFISHent/data_tables/new_training_z_std.scale.model' 2026-04-09T11:09:12,354 adding 'eFISHent/data_tables/pseudconst.dat' 2026-04-09T11:09:12,355 adding 'eFISHent/data_tables/rna.coaxial.dg' 2026-04-09T11:09:12,356 adding 'eFISHent/data_tables/rna.coaxial.dh' 2026-04-09T11:09:12,358 adding 'eFISHent/data_tables/rna.coaxstack.dg' 2026-04-09T11:09:12,359 adding 'eFISHent/data_tables/rna.coaxstack.dh' 2026-04-09T11:09:12,663 adding 'eFISHent/data_tables/rna.cov.dg' 2026-04-09T11:09:13,058 adding 'eFISHent/data_tables/rna.cov.dh' 2026-04-09T11:09:13,068 adding 'eFISHent/data_tables/rna.dangle.dg' 2026-04-09T11:09:13,069 adding 'eFISHent/data_tables/rna.dangle.dh' 2026-04-09T11:09:13,070 adding 'eFISHent/data_tables/rna.dynalignmiscloop.dg' 2026-04-09T11:09:13,071 adding 'eFISHent/data_tables/rna.hexaloop.dg' 2026-04-09T11:09:13,073 adding 'eFISHent/data_tables/rna.hexaloop.dh' 2026-04-09T11:09:13,074 adding 'eFISHent/data_tables/rna.int11.dg' 2026-04-09T11:09:13,075 adding 'eFISHent/data_tables/rna.int11.dh' 2026-04-09T11:09:13,078 adding 'eFISHent/data_tables/rna.int21.dg' 2026-04-09T11:09:13,080 adding 'eFISHent/data_tables/rna.int21.dh' 2026-04-09T11:09:13,086 adding 'eFISHent/data_tables/rna.int22.dg' 2026-04-09T11:09:13,094 adding 'eFISHent/data_tables/rna.int22.dh' 2026-04-09T11:09:13,096 adding 'eFISHent/data_tables/rna.loop.dg' 2026-04-09T11:09:13,097 adding 'eFISHent/data_tables/rna.loop.dh' 2026-04-09T11:09:13,099 adding 'eFISHent/data_tables/rna.miscloop.dg' 2026-04-09T11:09:13,100 adding 'eFISHent/data_tables/rna.miscloop.dh' 2026-04-09T11:09:13,259 adding 'eFISHent/data_tables/rna.param_map.dg' 2026-04-09T11:09:13,308 adding 'eFISHent/data_tables/rna.specification.dat' 2026-04-09T11:09:13,309 adding 'eFISHent/data_tables/rna.stack.dg' 2026-04-09T11:09:13,310 adding 'eFISHent/data_tables/rna.stack.dh' 2026-04-09T11:09:13,312 adding 'eFISHent/data_tables/rna.tloop.dg' 2026-04-09T11:09:13,313 adding 'eFISHent/data_tables/rna.tloop.dh' 2026-04-09T11:09:13,314 adding 'eFISHent/data_tables/rna.triloop.dg' 2026-04-09T11:09:13,315 adding 'eFISHent/data_tables/rna.triloop.dh' 2026-04-09T11:09:13,316 adding 'eFISHent/data_tables/rna.tstack.dg' 2026-04-09T11:09:13,318 adding 'eFISHent/data_tables/rna.tstack.dh' 2026-04-09T11:09:13,319 adding 'eFISHent/data_tables/rna.tstackcoax.dg' 2026-04-09T11:09:13,320 adding 'eFISHent/data_tables/rna.tstackcoax.dh' 2026-04-09T11:09:13,321 adding 'eFISHent/data_tables/rna.tstackh.dg' 2026-04-09T11:09:13,323 adding 'eFISHent/data_tables/rna.tstackh.dh' 2026-04-09T11:09:13,324 adding 'eFISHent/data_tables/rna.tstacki.dg' 2026-04-09T11:09:13,325 adding 'eFISHent/data_tables/rna.tstacki.dh' 2026-04-09T11:09:13,326 adding 'eFISHent/data_tables/rna.tstacki1n.dg' 2026-04-09T11:09:13,328 adding 'eFISHent/data_tables/rna.tstacki1n.dh' 2026-04-09T11:09:13,329 adding 'eFISHent/data_tables/rna.tstacki23.dg' 2026-04-09T11:09:13,330 adding 'eFISHent/data_tables/rna.tstacki23.dh' 2026-04-09T11:09:13,331 adding 'eFISHent/data_tables/rna.tstackm.dg' 2026-04-09T11:09:13,332 adding 'eFISHent/data_tables/rna.tstackm.dh' 2026-04-09T11:09:13,334 adding 'eFISHent/data_tables/stack.dat' 2026-04-09T11:09:13,335 adding 'eFISHent/data_tables/stack.dh' 2026-04-09T11:09:13,336 adding 'eFISHent/data_tables/stack.ds' 2026-04-09T11:09:13,337 adding 'eFISHent/data_tables/stackdr.dat' 2026-04-09T11:09:13,339 adding 'eFISHent/data_tables/stackdr.dh' 2026-04-09T11:09:13,340 adding 'eFISHent/data_tables/stackdr.ds' 2026-04-09T11:09:13,344 adding 'eFISHent/data_tables/std_ensemble_defect.model' 2026-04-09T11:09:13,345 adding 'eFISHent/data_tables/tloop.dat' 2026-04-09T11:09:13,346 adding 'eFISHent/data_tables/tloop.dh' 2026-04-09T11:09:13,348 adding 'eFISHent/data_tables/triloop.dat' 2026-04-09T11:09:13,349 adding 'eFISHent/data_tables/triloop.dh' 2026-04-09T11:09:13,350 adding 'eFISHent/data_tables/tstack.dat' 2026-04-09T11:09:13,351 adding 'eFISHent/data_tables/tstack.dh' 2026-04-09T11:09:13,352 adding 'eFISHent/data_tables/tstackcoax.dat' 2026-04-09T11:09:13,354 adding 'eFISHent/data_tables/tstackcoax.dh' 2026-04-09T11:09:13,355 adding 'eFISHent/data_tables/tstackh.dat' 2026-04-09T11:09:13,357 adding 'eFISHent/data_tables/tstackh.dh' 2026-04-09T11:09:13,358 adding 'eFISHent/data_tables/tstacki.dat' 2026-04-09T11:09:13,359 adding 'eFISHent/data_tables/tstacki.dh' 2026-04-09T11:09:13,360 adding 'eFISHent/data_tables/tstacki1n.dat' 2026-04-09T11:09:13,362 adding 'eFISHent/data_tables/tstacki1n.dh' 2026-04-09T11:09:13,363 adding 'eFISHent/data_tables/tstacki23.dat' 2026-04-09T11:09:13,364 adding 'eFISHent/data_tables/tstacki23.dh' 2026-04-09T11:09:13,366 adding 'eFISHent/data_tables/tstackm.dat' 2026-04-09T11:09:13,367 adding 'eFISHent/data_tables/tstackm.dh' 2026-04-09T11:09:13,371 adding 'efishent-0.0.14.dist-info/METADATA' 2026-04-09T11:09:13,372 adding 'efishent-0.0.14.dist-info/WHEEL' 2026-04-09T11:09:13,373 adding 'efishent-0.0.14.dist-info/entry_points.txt' 2026-04-09T11:09:13,374 adding 'efishent-0.0.14.dist-info/top_level.txt' 2026-04-09T11:09:13,377 adding 'efishent-0.0.14.dist-info/RECORD' 2026-04-09T11:09:13,412 removing build/bdist.linux-armv7l/wheel 2026-04-09T11:09:13,602 Building wheel for efishent (pyproject.toml): finished with status 'done' 2026-04-09T11:09:13,667 Created wheel for efishent: filename=efishent-0.0.14-py3-none-any.whl size=2878748 sha256=f8596df4850a2b496d12d73e9a79515fc7e91312c1b5c779ee4217d5a8f564fd 2026-04-09T11:09:13,668 Stored in directory: /tmp/pip-ephem-wheel-cache-tymfc4i4/wheels/c9/93/0f/afccab3ce6d0db14c51e8beee06aa56e9bbd17bcbf0a656260 2026-04-09T11:09:13,691 Successfully built efishent 2026-04-09T11:09:13,763 Removed build tracker: '/tmp/pip-build-tracker-2okje94o'