2026-04-09T13:49:50,671 Created temporary directory: /tmp/pip-ephem-wheel-cache-_speou6f 2026-04-09T13:49:50,673 Created temporary directory: /tmp/pip-build-tracker-n2ao_rms 2026-04-09T13:49:50,674 Initialized build tracking at /tmp/pip-build-tracker-n2ao_rms 2026-04-09T13:49:50,674 Created build tracker: /tmp/pip-build-tracker-n2ao_rms 2026-04-09T13:49:50,675 Entered build tracker: /tmp/pip-build-tracker-n2ao_rms 2026-04-09T13:49:50,675 Created temporary directory: /tmp/pip-wheel-e37trdlv 2026-04-09T13:49:50,678 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-09T13:49:50,681 Created temporary directory: /tmp/pip-ephem-wheel-cache-h8530_v1 2026-04-09T13:49:50,702 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-09T13:49:50,706 2 location(s) to search for versions of topiary: 2026-04-09T13:49:50,706 * https://pypi.org/simple/topiary/ 2026-04-09T13:49:50,706 * https://www.piwheels.org/simple/topiary/ 2026-04-09T13:49:50,707 Fetching project page and analyzing links: https://pypi.org/simple/topiary/ 2026-04-09T13:49:50,708 Getting page https://pypi.org/simple/topiary/ 2026-04-09T13:49:50,709 Found index url https://pypi.org/simple 2026-04-09T13:49:50,942 Fetched page https://pypi.org/simple/topiary/ as application/vnd.pypi.simple.v1+json 2026-04-09T13:49:50,952 Found link https://files.pythonhosted.org/packages/38/f6/60c60d77093e492c9a139a87514fa230296ca94080fec6d479f22bf5cfcd/topiary-0.0.0.tar.gz (from https://pypi.org/simple/topiary/), version: 0.0.0 2026-04-09T13:49:50,953 Found link https://files.pythonhosted.org/packages/40/7f/4c423389757bae0b47f7640d8b66bf9d5f5bbf6e387faa2dfa34fa0b809e/topiary-0.0.1.tar.gz (from https://pypi.org/simple/topiary/), version: 0.0.1 2026-04-09T13:49:50,954 Found link https://files.pythonhosted.org/packages/29/a2/eb5e9dec8dafc167f24cd4234a8d75b815411ea8b6af4724e8218038d52e/topiary-0.0.2.tar.gz (from https://pypi.org/simple/topiary/), version: 0.0.2 2026-04-09T13:49:50,955 Found link https://files.pythonhosted.org/packages/42/e4/e8450b31eac4229cfbe29bc87b8594ac1b03bc06f3272996cb3d50038c15/topiary-0.0.3.tar.gz (from https://pypi.org/simple/topiary/), version: 0.0.3 2026-04-09T13:49:50,955 Found link https://files.pythonhosted.org/packages/bc/ea/f0de38c2ba7970d28fe8404cd7bd32b2d041e7d3dc2027d7efff390e213c/topiary-0.0.4.tar.gz (from https://pypi.org/simple/topiary/), version: 0.0.4 2026-04-09T13:49:50,956 Found link 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https://files.pythonhosted.org/packages/19/7f/bf4d188a19634549a26b6b995a60146510435b5687a4c9afa5af01da4215/topiary-0.0.9.tar.gz (from https://pypi.org/simple/topiary/), version: 0.0.9 2026-04-09T13:49:50,959 Found link https://files.pythonhosted.org/packages/bb/b2/e507265c740fa360bf05b47f9e957ad5f8803233dd7c892979ee6d772e9b/topiary-0.0.10.tar.gz (from https://pypi.org/simple/topiary/), version: 0.0.10 2026-04-09T13:49:50,960 Found link https://files.pythonhosted.org/packages/d8/d8/d85f730eddd20a2df9d378a4d58a96d39e700c4fa109f1ead1a8f2509170/topiary-0.0.13.tar.gz (from https://pypi.org/simple/topiary/), version: 0.0.13 2026-04-09T13:49:50,961 Found link https://files.pythonhosted.org/packages/1a/e9/c5aad02530e1d64fc410dfc2e4eb32d4ace35d2367b6dbf9927b655e2af4/topiary-0.0.14.tar.gz (from https://pypi.org/simple/topiary/), version: 0.0.14 2026-04-09T13:49:50,962 Found link 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https://files.pythonhosted.org/packages/0e/4a/fbc62d6da7aeb1fa64fabd8d7f0836f5a079b0a098d9b2812b3158070672/topiary-0.0.19.tar.gz (from https://pypi.org/simple/topiary/), version: 0.0.19 2026-04-09T13:49:50,965 Found link https://files.pythonhosted.org/packages/8a/f7/6b7e6863daa1cb5125420e68e85c4da83490b0700a0cd743ff0505f49df0/topiary-0.0.20.tar.gz (from https://pypi.org/simple/topiary/), version: 0.0.20 2026-04-09T13:49:50,965 Found link https://files.pythonhosted.org/packages/0c/18/4fce39e2b363296333b7833c4624ad0fdfc799aab2771af18d5b13006be0/topiary-0.0.21.tar.gz (from https://pypi.org/simple/topiary/), version: 0.0.21 2026-04-09T13:49:50,966 Found link https://files.pythonhosted.org/packages/4f/8d/cfcda3d246e6a9dfd10fcda4de1b3cba171ffcf0508d3b8807f02765af1b/topiary-0.1.0.tar.gz (from https://pypi.org/simple/topiary/), version: 0.1.0 2026-04-09T13:49:50,966 Found link https://files.pythonhosted.org/packages/f4/24/61c55b78e2597bbec4941edcf4161328f725f96836e20dd3b55e4d9d5fc3/topiary-0.1.1-0.tar.gz (from https://pypi.org/simple/topiary/), version: 0.1.1-0 2026-04-09T13:49:50,967 Found link https://files.pythonhosted.org/packages/c4/6e/c3e2335ab2b5be7be8772ddd20bb158915ce5fdd0b11f8d55dea779638de/topiary-0.1.2.tar.gz (from https://pypi.org/simple/topiary/), version: 0.1.2 2026-04-09T13:49:50,968 Found link https://files.pythonhosted.org/packages/d3/fe/3b790a8e6401f8d7cfb50de1a4005e237f6c91ffa541c41524520c71e881/topiary-1.2.0.tar.gz (from https://pypi.org/simple/topiary/), version: 1.2.0 2026-04-09T13:49:50,969 Found link https://files.pythonhosted.org/packages/66/cd/6713c0c5cb9b5902943586a918f000ad4521e5d24a4ff32ee99b1d211167/topiary-1.2.1.tar.gz (from https://pypi.org/simple/topiary/), version: 1.2.1 2026-04-09T13:49:50,969 Found link https://files.pythonhosted.org/packages/52/f0/5083f0d77ce33732322b146ed0088bee776750a07d1ef52b65a5c4f3fe21/topiary-2.0.0.tar.gz (from https://pypi.org/simple/topiary/), version: 2.0.0 2026-04-09T13:49:50,970 Found link https://files.pythonhosted.org/packages/e2/13/7f3c8607ff3671a0d9f1f4eb58cb7f602ce540138329dee9a3bd581c84ea/topiary-2.1.0.tar.gz (from https://pypi.org/simple/topiary/), version: 2.1.0 2026-04-09T13:49:50,971 Found link https://files.pythonhosted.org/packages/3e/c7/ce747df518eafaab429e57814d08d6416c5d59fc06e8643b8a472ef0c1d2/topiary-2.2.0.tar.gz (from https://pypi.org/simple/topiary/), version: 2.2.0 2026-04-09T13:49:50,971 Found link https://files.pythonhosted.org/packages/8a/d1/5ff5c84ea223c671f94c9f7df80481663f3bd0755bdbdd597e83fe52ca81/topiary-3.0.0.tar.gz (from https://pypi.org/simple/topiary/), version: 3.0.0 2026-04-09T13:49:50,972 Found link https://files.pythonhosted.org/packages/f0/e5/e560a7ec932717d57aa88285331314549bfb43565b014416db30f826ce61/topiary-3.0.2.tar.gz (from https://pypi.org/simple/topiary/), version: 3.0.2 2026-04-09T13:49:50,973 Found link https://files.pythonhosted.org/packages/b2/0b/b44009ee261861f74d13b506f7d69a1c44f2df1990d046f7a852a5fe6540/topiary-3.0.6.tar.gz (from https://pypi.org/simple/topiary/), version: 3.0.6 2026-04-09T13:49:50,974 Skipping link: No binaries permitted for topiary: https://files.pythonhosted.org/packages/92/7e/4f1c24c87e1139b70f771b5b8248f28879e904b54c6b7bbf09ba52b3b019/topiary-4.0.0-py3-none-any.whl (from https://pypi.org/simple/topiary/) (requires-python:>=3.9) 2026-04-09T13:49:50,975 Found link https://files.pythonhosted.org/packages/ac/7a/aeb62683f7f6927facf941ff7afec97b8e4870a2ffd50769d17da45d2d39/topiary-4.0.0.tar.gz (from https://pypi.org/simple/topiary/) (requires-python:>=3.9), version: 4.0.0 2026-04-09T13:49:50,975 Skipping link: No binaries permitted for topiary: https://files.pythonhosted.org/packages/5d/42/858c5ac8bdb667c2175917adcdf342bbd83a0a5dff92c78b9bc4250b678f/topiary-4.0.1-py3-none-any.whl (from https://pypi.org/simple/topiary/) (requires-python:>=3.9) 2026-04-09T13:49:50,976 Found link https://files.pythonhosted.org/packages/14/09/67a3423dc279acfc48e7597c866f55b375a3b927257eed1d5e6a89d5743a/topiary-4.0.1.tar.gz (from https://pypi.org/simple/topiary/) (requires-python:>=3.9), version: 4.0.1 2026-04-09T13:49:50,977 Skipping link: No binaries permitted for topiary: https://files.pythonhosted.org/packages/df/cd/7ec888a9a462fd4e98bd23f28d44abccc196e8db31a8ca52275092c6b1cd/topiary-4.1.0-py3-none-any.whl (from https://pypi.org/simple/topiary/) (requires-python:>=3.9) 2026-04-09T13:49:50,977 Found link https://files.pythonhosted.org/packages/cf/87/435da8d2f668d1e6ef06cbe0d7b5be5bc5b7dddeea194da661bd177c8464/topiary-4.1.0.tar.gz (from https://pypi.org/simple/topiary/) (requires-python:>=3.9), version: 4.1.0 2026-04-09T13:49:50,978 Skipping link: No binaries permitted for topiary: https://files.pythonhosted.org/packages/ac/34/3b0e9e182a15143f915de95583f5f9ae4a0af31973dcb5cf5c5dce04665f/topiary-4.2.0-py3-none-any.whl (from https://pypi.org/simple/topiary/) (requires-python:>=3.9) 2026-04-09T13:49:50,979 Found link https://files.pythonhosted.org/packages/d0/da/88cb66c3e8c3e2511a1fbf3c987e27882e46f234ba44c19600b7c828787c/topiary-4.2.0.tar.gz (from https://pypi.org/simple/topiary/) (requires-python:>=3.9), version: 4.2.0 2026-04-09T13:49:50,980 Skipping link: No binaries permitted for topiary: https://files.pythonhosted.org/packages/ef/2a/9ed13bfcb0a373e03cf4e72ba2bfa9b40c4901dfb40317ba3f31df471dd7/topiary-4.2.1-py3-none-any.whl (from https://pypi.org/simple/topiary/) (requires-python:>=3.9) 2026-04-09T13:49:50,981 Found link https://files.pythonhosted.org/packages/12/07/506911d38ca3c79569b36a1df628d6c5ae1d6f3717b7d66725325cd44c61/topiary-4.2.1.tar.gz (from https://pypi.org/simple/topiary/) (requires-python:>=3.9), version: 4.2.1 2026-04-09T13:49:50,981 Skipping link: No binaries permitted for topiary: https://files.pythonhosted.org/packages/59/2e/cb900a5b91dc5ca7b73c4a7db7e4a52e8305a1b7cb907d01846d6d4dbec4/topiary-4.3.0-py3-none-any.whl (from https://pypi.org/simple/topiary/) (requires-python:>=3.9) 2026-04-09T13:49:50,982 Found link https://files.pythonhosted.org/packages/52/f5/5562c03f4048966e2bd27264ca60ad2d438b350a6092016d58fe8af0607f/topiary-4.3.0.tar.gz (from https://pypi.org/simple/topiary/) (requires-python:>=3.9), version: 4.3.0 2026-04-09T13:49:50,983 Skipping link: No binaries permitted for topiary: https://files.pythonhosted.org/packages/00/b0/7532d1d0d6f03d2c26e7e02f059ea9c3c2d04e1f464d5fa21a76768e4835/topiary-4.3.1-py3-none-any.whl (from https://pypi.org/simple/topiary/) (requires-python:>=3.9) 2026-04-09T13:49:50,984 Found link https://files.pythonhosted.org/packages/dc/da/1df0b540aeb1db5aac978549b92a93ca0a5b6d6d9a63bee47df284d24d98/topiary-4.3.1.tar.gz (from https://pypi.org/simple/topiary/) (requires-python:>=3.9), version: 4.3.1 2026-04-09T13:49:50,985 Skipping link: No binaries permitted for topiary: https://files.pythonhosted.org/packages/76/c7/4712955ed5555ab5487734b7608dcb614604097ac36f5746bffe56b783aa/topiary-4.3.2-py3-none-any.whl (from https://pypi.org/simple/topiary/) (requires-python:>=3.9) 2026-04-09T13:49:50,986 Found link https://files.pythonhosted.org/packages/4e/43/42cf14fecd4f5129816f90747c6594400bed574ae6c7d48354cc5115e5bf/topiary-4.3.2.tar.gz (from https://pypi.org/simple/topiary/) (requires-python:>=3.9), version: 4.3.2 2026-04-09T13:49:50,987 Skipping link: No binaries permitted for topiary: https://files.pythonhosted.org/packages/f4/79/57aa4eafe901be83a98397a11e79182e30862c99ca28815a8691ebe64d19/topiary-4.4.0-py3-none-any.whl (from https://pypi.org/simple/topiary/) (requires-python:>=3.9) 2026-04-09T13:49:50,988 Found link https://files.pythonhosted.org/packages/6d/d6/59b4157e9b3d446648b7625954b484a190ebd9303c8213186ef0f8cf652f/topiary-4.4.0.tar.gz (from https://pypi.org/simple/topiary/) (requires-python:>=3.9), version: 4.4.0 2026-04-09T13:49:50,988 Skipping link: No binaries permitted for topiary: https://files.pythonhosted.org/packages/f8/ea/226fefac235e8b1b21b9171970bcdd05976161d2a65b4b6a1574c3a8b92c/topiary-4.5.0-py3-none-any.whl (from https://pypi.org/simple/topiary/) (requires-python:>=3.9) 2026-04-09T13:49:50,989 Found link https://files.pythonhosted.org/packages/56/9b/5ee22541bdae815cb3805958f6588e6f7ff69b2a2476545e91f395358003/topiary-4.5.0.tar.gz (from https://pypi.org/simple/topiary/) (requires-python:>=3.9), version: 4.5.0 2026-04-09T13:49:50,990 Fetching project page and analyzing links: https://www.piwheels.org/simple/topiary/ 2026-04-09T13:49:50,990 Getting page https://www.piwheels.org/simple/topiary/ 2026-04-09T13:49:50,992 Found index url https://www.piwheels.org/simple 2026-04-09T13:49:51,258 Fetched page https://www.piwheels.org/simple/topiary/ as text/html 2026-04-09T13:49:51,269 Skipping link: No binaries permitted for topiary: https://www.piwheels.org/simple/topiary/topiary-4.4.0-py3-none-any.whl#sha256=1c56a7f3683860a125cac2ebe2eb96e7845cbee691f3f0338c3ed6e336ac5bbe (from https://www.piwheels.org/simple/topiary/) (requires-python:>=3.9) 2026-04-09T13:49:51,270 Skipping link: No binaries permitted for topiary: https://www.piwheels.org/simple/topiary/topiary-4.3.2-py3-none-any.whl#sha256=8f63e71936c3b02f002347a85c852e16fd02a920c2d6c8788ade523951cb02b7 (from https://www.piwheels.org/simple/topiary/) (requires-python:>=3.9) 2026-04-09T13:49:51,271 Skipping link: No binaries permitted for topiary: https://www.piwheels.org/simple/topiary/topiary-4.3.1-py3-none-any.whl#sha256=ddf47cd29a48c03ae14cdef73eba491b8616e7c06a18c0f6bd4076fe7aa3be6a (from https://www.piwheels.org/simple/topiary/) (requires-python:>=3.9) 2026-04-09T13:49:51,271 Skipping link: No 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https://www.piwheels.org/simple/topiary/topiary-4.1.0-py3-none-any.whl#sha256=12d648d2024cd779738a89a84c36ad78fd6dc24771fde74c865b174d4cf9f3f0 (from https://www.piwheels.org/simple/topiary/) (requires-python:>=3.9) 2026-04-09T13:49:51,274 Skipping link: No binaries permitted for topiary: https://www.piwheels.org/simple/topiary/topiary-4.0.1-py3-none-any.whl#sha256=9de960662eeb8ff6dd66c2b9ad248b8aab89bfb38a1686b46455203ddab35029 (from https://www.piwheels.org/simple/topiary/) (requires-python:>=3.9) 2026-04-09T13:49:51,275 Skipping link: No binaries permitted for topiary: https://www.piwheels.org/simple/topiary/topiary-4.0.0-py3-none-any.whl#sha256=56965eea765f6d31c879ce179bee7f0f3efad79829b782938aa6571f012a774f (from https://www.piwheels.org/simple/topiary/) (requires-python:>=3.9) 2026-04-09T13:49:51,276 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-3.0.6-py3-none-any.whl#sha256=bbfaba8444095e39ed9ed8d14e7460f26f7c5d785e452bd44bcb533ef77fc8e4 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T13:49:51,276 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-3.0.2-py3-none-any.whl#sha256=8a9776d2965569019b41fbae3578df6ac218b66915ac8b5e209b73b7df1e4ac0 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T13:49:51,276 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-3.0.0-py3-none-any.whl#sha256=687e9928c772d363c854ecaf8e073eba63cbdaf8b974690d8f83f522fcd7723f (from https://www.piwheels.org/simple/topiary/) 2026-04-09T13:49:51,277 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-2.2.0-py3-none-any.whl#sha256=afb7b09b18f345de86420e8f1d61284c526a3bdcb0e352639c7383105203b2f9 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T13:49:51,277 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-2.1.0-py3-none-any.whl#sha256=6a54b133dc04b282ecb6254205dd09896a559c40a793a5470a1e8d77ed2244b1 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T13:49:51,278 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-2.0.0-py3-none-any.whl#sha256=bf376c02311efd5c80a0793be89ae4a34d82ab5397b5861dd664ce96d3e48a38 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T13:49:51,278 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-1.2.1-py3-none-any.whl#sha256=bc761dde043d0b6aa59153fc4cef4c3f4173d9cc2af622fc8263962c2fc21f0d (from https://www.piwheels.org/simple/topiary/) 2026-04-09T13:49:51,279 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-1.2.0-py3-none-any.whl#sha256=311e8283cb60ad0d52bad801d50774f6634e70f8998da593fb6bd3b2bc6ffa65 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T13:49:51,279 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.1.2-py3-none-any.whl#sha256=e7a1c96210356871a2273cd29f1899190e3ed5683d4a4572088cd945d1f5e758 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T13:49:51,280 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.1.0-py3-none-any.whl#sha256=46f5f6e4d2071e7711aa10d069defad14ffdf877b255780830a6cf6e42b61d5f (from https://www.piwheels.org/simple/topiary/) 2026-04-09T13:49:51,280 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.21-py3-none-any.whl#sha256=3983f7c3fbcff8c1a577833c364c6e99c1d98ac9955c3696439f59d8faa8eeda (from https://www.piwheels.org/simple/topiary/) 2026-04-09T13:49:51,281 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.20-py3-none-any.whl#sha256=3fb43551e5d6896e3e54f5a33a29922523c71c15b3849801206d04a8c4805350 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T13:49:51,282 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.19-py3-none-any.whl#sha256=0bdd9a0f991558f802326026fec79812c40392013a16fa27d697a9c37d0cf12c (from https://www.piwheels.org/simple/topiary/) 2026-04-09T13:49:51,282 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.18-py3-none-any.whl#sha256=9e812f2912a401afd7be2c4905413e0c158d97a57ddd49a478edb0b8d9805a28 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T13:49:51,283 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.17-py3-none-any.whl#sha256=9caa65a5a200720510e1c38a256ba0ee4702a443d0c0f9e56724aaa16b907517 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T13:49:51,283 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.16-py3-none-any.whl#sha256=1cce9bca3cbb426edd71bbf7bbd1c069b0498c46d67ce549315317b0f75ab1d6 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T13:49:51,284 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.15-py3-none-any.whl#sha256=ca5ae7481368a4fb5d839d1ac3cab6823cbebeb2733ef0e9c6b2275854eb895f (from https://www.piwheels.org/simple/topiary/) 2026-04-09T13:49:51,284 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.14-py3-none-any.whl#sha256=48e8744f89c7f03717c8e36a17ede28b495b845c7106cb5638c216db27054fad (from https://www.piwheels.org/simple/topiary/) 2026-04-09T13:49:51,285 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.13-py3-none-any.whl#sha256=588396661f87bea8be890d90c6800ac4825d06ae7db1c50c98a1978fe9c45bd3 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T13:49:51,285 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.10-py3-none-any.whl#sha256=56bea0cecf1273a44cd2e51ad294714c41e0fb7d9cc0b16382709573c4ec9443 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T13:49:51,286 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.9-py3-none-any.whl#sha256=da4dc4334fdf5cb89b68356e11737c8dab86fd100b9c7979e95eac3dc58fbd6d (from https://www.piwheels.org/simple/topiary/) 2026-04-09T13:49:51,286 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.8-py3-none-any.whl#sha256=12b4f283d8fbedbd316649be8833a17fee852097f1e5cd8963264e6c4a2721e0 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T13:49:51,287 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.7-py3-none-any.whl#sha256=6e23dbd38e19c12b658a8373b501f1e929c6fd3420749dee506a82b60b190d42 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T13:49:51,287 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.6-py3-none-any.whl#sha256=f3b597a0744c3a7540c3ffe571b8f4fad3d2ad40ddc6198952e2aee7c96ff82c (from https://www.piwheels.org/simple/topiary/) 2026-04-09T13:49:51,288 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.5-py3-none-any.whl#sha256=52f489eb5876b619e9988ee4c2fabec4df1a087c2f67f96cbb99ece92eb57576 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T13:49:51,289 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.4-py3-none-any.whl#sha256=5c94fb56e54399233efc5f88a6f6cfe2914773c5b2aa67a24f6ddf6089561b3b (from https://www.piwheels.org/simple/topiary/) 2026-04-09T13:49:51,289 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.3-py3-none-any.whl#sha256=197f9da38cd367d77acaec6282f0d22aefaf1e1ab6754379f671902958348f15 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T13:49:51,290 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.2-py3-none-any.whl#sha256=accaff90bafe6c929aece0f65b8ccedd45839064bf361d8f69bfefd543127ec2 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T13:49:51,290 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.1-py3-none-any.whl#sha256=6743a02aee34bc7567913bbe5c15a321924d9e1cb2c15f956e4ebb9b321707f4 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T13:49:51,291 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.0-py3-none-any.whl#sha256=a4de4e13dc8561c43fd350094d3cbc3267e0faacf5e65b94501ef15affdf51e6 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T13:49:51,292 Skipping link: not a file: https://www.piwheels.org/simple/topiary/ 2026-04-09T13:49:51,292 Skipping link: not a file: https://pypi.org/simple/topiary/ 2026-04-09T13:49:51,317 Given no hashes to check 1 links for project 'topiary': discarding no candidates 2026-04-09T13:49:51,336 Collecting topiary==4.5.0 2026-04-09T13:49:51,339 Created temporary directory: /tmp/pip-unpack-r6uuabkv 2026-04-09T13:49:51,569 Downloading topiary-4.5.0.tar.gz (72 kB) 2026-04-09T13:49:51,750 Added topiary==4.5.0 from https://files.pythonhosted.org/packages/56/9b/5ee22541bdae815cb3805958f6588e6f7ff69b2a2476545e91f395358003/topiary-4.5.0.tar.gz to build tracker '/tmp/pip-build-tracker-n2ao_rms' 2026-04-09T13:49:51,754 Created temporary directory: /tmp/pip-build-env-q_0fgvuj 2026-04-09T13:49:51,759 Installing build dependencies: started 2026-04-09T13:49:51,760 Running command pip subprocess to install build dependencies 2026-04-09T13:49:51,790 Error processing line 1 of /home/piwheels/.local/lib/python3.11/site-packages/outofcuda_hook.pth: 2026-04-09T13:49:51,830 Traceback (most recent call last): 2026-04-09T13:49:51,830 File "", line 192, in addpackage 2026-04-09T13:49:51,831 File "", line 1, in 2026-04-09T13:49:51,831 ModuleNotFoundError: No module named 'outofcuda' 2026-04-09T13:49:51,832 Remainder of file ignored 2026-04-09T13:49:52,928 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-04-09T13:49:53,343 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-09T13:49:53,366 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-09T13:49:55,129 Collecting setuptools>=64 2026-04-09T13:49:55,206 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-04-09T13:49:58,179 Installing collected packages: setuptools 2026-04-09T13:50:01,237 Successfully installed setuptools-82.0.1 2026-04-09T13:50:01,503 Installing build dependencies: finished with status 'done' 2026-04-09T13:50:01,510 Getting requirements to build wheel: started 2026-04-09T13:50:01,511 Running command Getting requirements to build wheel 2026-04-09T13:50:02,183 /tmp/pip-build-env-q_0fgvuj/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-09T13:50:02,183 !! 2026-04-09T13:50:02,184 ******************************************************************************** 2026-04-09T13:50:02,185 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-09T13:50:02,186 License :: OSI Approved :: Apache Software License 2026-04-09T13:50:02,187 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-09T13:50:02,188 ******************************************************************************** 2026-04-09T13:50:02,189 !! 2026-04-09T13:50:02,190 dist._finalize_license_expression() 2026-04-09T13:50:02,190 /tmp/pip-build-env-q_0fgvuj/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-09T13:50:02,191 !! 2026-04-09T13:50:02,192 ******************************************************************************** 2026-04-09T13:50:02,193 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-09T13:50:02,194 License :: OSI Approved :: Apache Software License 2026-04-09T13:50:02,195 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-09T13:50:02,195 ******************************************************************************** 2026-04-09T13:50:02,196 !! 2026-04-09T13:50:02,196 self._finalize_license_expression() 2026-04-09T13:50:02,197 running egg_info 2026-04-09T13:50:02,203 writing topiary.egg-info/PKG-INFO 2026-04-09T13:50:02,207 writing dependency_links to topiary.egg-info/dependency_links.txt 2026-04-09T13:50:02,208 writing entry points to topiary.egg-info/entry_points.txt 2026-04-09T13:50:02,210 writing requirements to topiary.egg-info/requires.txt 2026-04-09T13:50:02,211 writing top-level names to topiary.egg-info/top_level.txt 2026-04-09T13:50:02,235 reading manifest file 'topiary.egg-info/SOURCES.txt' 2026-04-09T13:50:02,240 adding license file 'LICENSE' 2026-04-09T13:50:02,245 writing manifest file 'topiary.egg-info/SOURCES.txt' 2026-04-09T13:50:02,342 Getting requirements to build wheel: finished with status 'done' 2026-04-09T13:50:02,345 Created temporary directory: /tmp/pip-modern-metadata-ztn7w4ol 2026-04-09T13:50:02,347 Preparing metadata (pyproject.toml): started 2026-04-09T13:50:02,349 Running command Preparing metadata (pyproject.toml) 2026-04-09T13:50:03,017 /tmp/pip-build-env-q_0fgvuj/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-09T13:50:03,018 !! 2026-04-09T13:50:03,019 ******************************************************************************** 2026-04-09T13:50:03,019 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-09T13:50:03,020 License :: OSI Approved :: Apache Software License 2026-04-09T13:50:03,021 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-09T13:50:03,022 ******************************************************************************** 2026-04-09T13:50:03,023 !! 2026-04-09T13:50:03,024 dist._finalize_license_expression() 2026-04-09T13:50:03,025 /tmp/pip-build-env-q_0fgvuj/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-09T13:50:03,026 !! 2026-04-09T13:50:03,027 ******************************************************************************** 2026-04-09T13:50:03,027 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-09T13:50:03,029 License :: OSI Approved :: Apache Software License 2026-04-09T13:50:03,030 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-09T13:50:03,030 ******************************************************************************** 2026-04-09T13:50:03,031 !! 2026-04-09T13:50:03,032 self._finalize_license_expression() 2026-04-09T13:50:03,033 running dist_info 2026-04-09T13:50:03,041 creating /tmp/pip-modern-metadata-ztn7w4ol/topiary.egg-info 2026-04-09T13:50:03,043 writing /tmp/pip-modern-metadata-ztn7w4ol/topiary.egg-info/PKG-INFO 2026-04-09T13:50:03,047 writing dependency_links to /tmp/pip-modern-metadata-ztn7w4ol/topiary.egg-info/dependency_links.txt 2026-04-09T13:50:03,049 writing entry points to /tmp/pip-modern-metadata-ztn7w4ol/topiary.egg-info/entry_points.txt 2026-04-09T13:50:03,051 writing requirements to /tmp/pip-modern-metadata-ztn7w4ol/topiary.egg-info/requires.txt 2026-04-09T13:50:03,052 writing top-level names to /tmp/pip-modern-metadata-ztn7w4ol/topiary.egg-info/top_level.txt 2026-04-09T13:50:03,053 writing manifest file '/tmp/pip-modern-metadata-ztn7w4ol/topiary.egg-info/SOURCES.txt' 2026-04-09T13:50:03,076 reading manifest file '/tmp/pip-modern-metadata-ztn7w4ol/topiary.egg-info/SOURCES.txt' 2026-04-09T13:50:03,078 adding license file 'LICENSE' 2026-04-09T13:50:03,082 writing manifest file '/tmp/pip-modern-metadata-ztn7w4ol/topiary.egg-info/SOURCES.txt' 2026-04-09T13:50:03,083 creating '/tmp/pip-modern-metadata-ztn7w4ol/topiary-4.5.0.dist-info' 2026-04-09T13:50:03,209 Preparing metadata (pyproject.toml): finished with status 'done' 2026-04-09T13:50:03,214 Source in /tmp/pip-wheel-e37trdlv/topiary_14290405e1b148948fc755ab1ef294cd has version 4.5.0, which satisfies requirement topiary==4.5.0 from https://files.pythonhosted.org/packages/56/9b/5ee22541bdae815cb3805958f6588e6f7ff69b2a2476545e91f395358003/topiary-4.5.0.tar.gz 2026-04-09T13:50:03,215 Removed topiary==4.5.0 from https://files.pythonhosted.org/packages/56/9b/5ee22541bdae815cb3805958f6588e6f7ff69b2a2476545e91f395358003/topiary-4.5.0.tar.gz from build tracker '/tmp/pip-build-tracker-n2ao_rms' 2026-04-09T13:50:03,222 Created temporary directory: /tmp/pip-unpack-_7pke14w 2026-04-09T13:50:03,222 Building wheels for collected packages: topiary 2026-04-09T13:50:03,227 Created temporary directory: /tmp/pip-wheel-q0nvm3o8 2026-04-09T13:50:03,228 Destination directory: /tmp/pip-wheel-q0nvm3o8 2026-04-09T13:50:03,230 Building wheel for topiary (pyproject.toml): started 2026-04-09T13:50:03,231 Running command Building wheel for topiary (pyproject.toml) 2026-04-09T13:50:03,858 /tmp/pip-build-env-q_0fgvuj/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-09T13:50:03,858 !! 2026-04-09T13:50:03,859 ******************************************************************************** 2026-04-09T13:50:03,860 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-09T13:50:03,861 License :: OSI Approved :: Apache Software License 2026-04-09T13:50:03,862 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-09T13:50:03,863 ******************************************************************************** 2026-04-09T13:50:03,864 !! 2026-04-09T13:50:03,865 dist._finalize_license_expression() 2026-04-09T13:50:03,866 /tmp/pip-build-env-q_0fgvuj/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-09T13:50:03,867 !! 2026-04-09T13:50:03,868 ******************************************************************************** 2026-04-09T13:50:03,868 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-09T13:50:03,870 License :: OSI Approved :: Apache Software License 2026-04-09T13:50:03,871 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-09T13:50:03,871 ******************************************************************************** 2026-04-09T13:50:03,872 !! 2026-04-09T13:50:03,873 self._finalize_license_expression() 2026-04-09T13:50:03,874 running bdist_wheel 2026-04-09T13:50:03,885 running build 2026-04-09T13:50:03,885 running build_py 2026-04-09T13:50:03,892 creating build/lib/tests 2026-04-09T13:50:03,894 copying tests/test_variant_expression_filters.py -> build/lib/tests 2026-04-09T13:50:03,896 copying tests/data.py -> build/lib/tests 2026-04-09T13:50:03,898 copying tests/test_epitopes_from_commandline_args.py -> build/lib/tests 2026-04-09T13:50:03,900 copying tests/test_ranking.py -> build/lib/tests 2026-04-09T13:50:03,903 copying tests/__init__.py -> build/lib/tests 2026-04-09T13:50:03,905 copying tests/test_validation_and_edge_cases.py -> build/lib/tests 2026-04-09T13:50:03,908 copying tests/test_direct_input_regressions.py -> build/lib/tests 2026-04-09T13:50:03,910 copying tests/test_dsl_extensions.py -> build/lib/tests 2026-04-09T13:50:03,913 copying tests/test_load_cufflinks_fpkm.py -> build/lib/tests 2026-04-09T13:50:03,915 copying tests/test_integration.py -> build/lib/tests 2026-04-09T13:50:03,917 copying tests/test_peptide_mutation_interval.py -> build/lib/tests 2026-04-09T13:50:03,919 copying tests/test_sources.py -> build/lib/tests 2026-04-09T13:50:03,921 copying tests/test_args_outputs.py -> build/lib/tests 2026-04-09T13:50:03,923 copying tests/test_contains_mutant_residues.py -> build/lib/tests 2026-04-09T13:50:03,925 copying tests/test_load_stringtie_gtf_fpkm.py -> build/lib/tests 2026-04-09T13:50:03,926 copying tests/test_cli_protein_changes.py -> build/lib/tests 2026-04-09T13:50:03,928 copying tests/test_mutant_epitope_predictions_class2.py -> build/lib/tests 2026-04-09T13:50:03,930 copying tests/test_end_to_end.py -> build/lib/tests 2026-04-09T13:50:03,932 copying tests/test_sources_optional.py -> build/lib/tests 2026-04-09T13:50:03,934 copying tests/test_rna_helpers.py -> build/lib/tests 2026-04-09T13:50:03,936 copying tests/test_mutant_epitope_predictions_class1.py -> build/lib/tests 2026-04-09T13:50:03,938 copying tests/test_dataframe.py -> build/lib/tests 2026-04-09T13:50:03,940 copying tests/test_padding.py -> build/lib/tests 2026-04-09T13:50:03,941 copying tests/test_coverage_gaps.py -> build/lib/tests 2026-04-09T13:50:03,944 copying tests/test_inputs.py -> build/lib/tests 2026-04-09T13:50:03,946 copying tests/common.py -> build/lib/tests 2026-04-09T13:50:03,948 copying tests/test_effect_expression_filters.py -> build/lib/tests 2026-04-09T13:50:03,950 creating build/lib/topiary 2026-04-09T13:50:03,951 copying topiary/inputs.py -> build/lib/topiary 2026-04-09T13:50:03,954 copying topiary/__init__.py -> build/lib/topiary 2026-04-09T13:50:03,956 copying topiary/filters.py -> build/lib/topiary 2026-04-09T13:50:03,958 copying topiary/sources.py -> build/lib/topiary 2026-04-09T13:50:03,961 copying topiary/ranking.py -> build/lib/topiary 2026-04-09T13:50:03,964 copying topiary/predictor.py -> build/lib/topiary 2026-04-09T13:50:03,966 copying topiary/properties.py -> build/lib/topiary 2026-04-09T13:50:03,969 copying topiary/sequence_helpers.py -> build/lib/topiary 2026-04-09T13:50:03,972 creating build/lib/topiary/cli 2026-04-09T13:50:03,973 copying topiary/cli/__init__.py -> build/lib/topiary/cli 2026-04-09T13:50:03,975 copying topiary/cli/protein_changes.py -> build/lib/topiary/cli 2026-04-09T13:50:03,977 copying topiary/cli/errors.py -> build/lib/topiary/cli 2026-04-09T13:50:03,979 copying topiary/cli/script.py -> build/lib/topiary/cli 2026-04-09T13:50:03,980 copying topiary/cli/filtering.py -> build/lib/topiary/cli 2026-04-09T13:50:03,982 copying topiary/cli/sequence.py -> build/lib/topiary/cli 2026-04-09T13:50:03,984 copying topiary/cli/rna.py -> build/lib/topiary/cli 2026-04-09T13:50:03,986 copying topiary/cli/outputs.py -> build/lib/topiary/cli 2026-04-09T13:50:03,988 copying topiary/cli/args.py -> build/lib/topiary/cli 2026-04-09T13:50:03,991 creating build/lib/topiary/rna 2026-04-09T13:50:03,992 copying topiary/rna/cufflinks.py -> build/lib/topiary/rna 2026-04-09T13:50:03,995 copying topiary/rna/__init__.py -> build/lib/topiary/rna 2026-04-09T13:50:03,996 copying topiary/rna/gtf.py -> build/lib/topiary/rna 2026-04-09T13:50:03,998 copying topiary/rna/common.py -> build/lib/topiary/rna 2026-04-09T13:50:04,000 running egg_info 2026-04-09T13:50:04,010 writing topiary.egg-info/PKG-INFO 2026-04-09T13:50:04,014 writing dependency_links to topiary.egg-info/dependency_links.txt 2026-04-09T13:50:04,016 writing entry points to topiary.egg-info/entry_points.txt 2026-04-09T13:50:04,017 writing requirements to topiary.egg-info/requires.txt 2026-04-09T13:50:04,018 writing top-level names to topiary.egg-info/top_level.txt 2026-04-09T13:50:04,032 reading manifest file 'topiary.egg-info/SOURCES.txt' 2026-04-09T13:50:04,036 adding license file 'LICENSE' 2026-04-09T13:50:04,041 writing manifest file 'topiary.egg-info/SOURCES.txt' 2026-04-09T13:50:04,056 installing to build/bdist.linux-armv7l/wheel 2026-04-09T13:50:04,057 running install 2026-04-09T13:50:04,081 running install_lib 2026-04-09T13:50:04,086 creating build/bdist.linux-armv7l/wheel 2026-04-09T13:50:04,089 creating build/bdist.linux-armv7l/wheel/tests 2026-04-09T13:50:04,090 copying build/lib/tests/test_variant_expression_filters.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T13:50:04,092 copying build/lib/tests/data.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T13:50:04,094 copying build/lib/tests/test_epitopes_from_commandline_args.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T13:50:04,095 copying build/lib/tests/test_ranking.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T13:50:04,099 copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T13:50:04,101 copying build/lib/tests/test_validation_and_edge_cases.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T13:50:04,103 copying build/lib/tests/test_direct_input_regressions.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T13:50:04,105 copying build/lib/tests/test_dsl_extensions.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T13:50:04,108 copying build/lib/tests/test_load_cufflinks_fpkm.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T13:50:04,109 copying build/lib/tests/test_integration.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T13:50:04,111 copying build/lib/tests/test_peptide_mutation_interval.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T13:50:04,113 copying build/lib/tests/test_sources.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T13:50:04,115 copying build/lib/tests/test_args_outputs.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T13:50:04,117 copying build/lib/tests/test_contains_mutant_residues.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T13:50:04,119 copying build/lib/tests/test_load_stringtie_gtf_fpkm.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T13:50:04,121 copying build/lib/tests/test_cli_protein_changes.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T13:50:04,123 copying build/lib/tests/test_mutant_epitope_predictions_class2.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T13:50:04,125 copying build/lib/tests/test_end_to_end.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T13:50:04,127 copying build/lib/tests/test_sources_optional.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T13:50:04,129 copying build/lib/tests/test_rna_helpers.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T13:50:04,131 copying build/lib/tests/test_mutant_epitope_predictions_class1.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T13:50:04,133 copying build/lib/tests/test_dataframe.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T13:50:04,135 copying build/lib/tests/test_padding.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T13:50:04,136 copying build/lib/tests/test_coverage_gaps.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T13:50:04,138 copying build/lib/tests/test_inputs.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T13:50:04,141 copying build/lib/tests/common.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T13:50:04,142 copying build/lib/tests/test_effect_expression_filters.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T13:50:04,145 creating build/bdist.linux-armv7l/wheel/topiary 2026-04-09T13:50:04,146 copying build/lib/topiary/inputs.py -> build/bdist.linux-armv7l/wheel/./topiary 2026-04-09T13:50:04,149 copying build/lib/topiary/__init__.py -> build/bdist.linux-armv7l/wheel/./topiary 2026-04-09T13:50:04,150 copying build/lib/topiary/filters.py -> build/bdist.linux-armv7l/wheel/./topiary 2026-04-09T13:50:04,153 copying build/lib/topiary/sources.py -> build/bdist.linux-armv7l/wheel/./topiary 2026-04-09T13:50:04,156 creating build/bdist.linux-armv7l/wheel/topiary/cli 2026-04-09T13:50:04,157 copying build/lib/topiary/cli/__init__.py -> build/bdist.linux-armv7l/wheel/./topiary/cli 2026-04-09T13:50:04,159 copying build/lib/topiary/cli/protein_changes.py -> build/bdist.linux-armv7l/wheel/./topiary/cli 2026-04-09T13:50:04,161 copying build/lib/topiary/cli/errors.py -> build/bdist.linux-armv7l/wheel/./topiary/cli 2026-04-09T13:50:04,163 copying build/lib/topiary/cli/script.py -> build/bdist.linux-armv7l/wheel/./topiary/cli 2026-04-09T13:50:04,165 copying build/lib/topiary/cli/filtering.py -> build/bdist.linux-armv7l/wheel/./topiary/cli 2026-04-09T13:50:04,167 copying build/lib/topiary/cli/sequence.py -> build/bdist.linux-armv7l/wheel/./topiary/cli 2026-04-09T13:50:04,169 copying build/lib/topiary/cli/rna.py -> build/bdist.linux-armv7l/wheel/./topiary/cli 2026-04-09T13:50:04,170 copying build/lib/topiary/cli/outputs.py -> build/bdist.linux-armv7l/wheel/./topiary/cli 2026-04-09T13:50:04,172 copying build/lib/topiary/cli/args.py -> build/bdist.linux-armv7l/wheel/./topiary/cli 2026-04-09T13:50:04,175 copying build/lib/topiary/ranking.py -> build/bdist.linux-armv7l/wheel/./topiary 2026-04-09T13:50:04,178 copying build/lib/topiary/predictor.py -> build/bdist.linux-armv7l/wheel/./topiary 2026-04-09T13:50:04,181 creating build/bdist.linux-armv7l/wheel/topiary/rna 2026-04-09T13:50:04,182 copying build/lib/topiary/rna/cufflinks.py -> build/bdist.linux-armv7l/wheel/./topiary/rna 2026-04-09T13:50:04,185 copying build/lib/topiary/rna/__init__.py -> build/bdist.linux-armv7l/wheel/./topiary/rna 2026-04-09T13:50:04,186 copying build/lib/topiary/rna/gtf.py -> build/bdist.linux-armv7l/wheel/./topiary/rna 2026-04-09T13:50:04,188 copying build/lib/topiary/rna/common.py -> build/bdist.linux-armv7l/wheel/./topiary/rna 2026-04-09T13:50:04,190 copying build/lib/topiary/properties.py -> build/bdist.linux-armv7l/wheel/./topiary 2026-04-09T13:50:04,193 copying build/lib/topiary/sequence_helpers.py -> build/bdist.linux-armv7l/wheel/./topiary 2026-04-09T13:50:04,195 running install_egg_info 2026-04-09T13:50:04,200 Copying topiary.egg-info to build/bdist.linux-armv7l/wheel/./topiary-4.5.0-py3.11.egg-info 2026-04-09T13:50:04,212 running install_scripts 2026-04-09T13:50:04,224 creating build/bdist.linux-armv7l/wheel/topiary-4.5.0.dist-info/WHEEL 2026-04-09T13:50:04,227 creating '/tmp/pip-wheel-q0nvm3o8/.tmp-xe40ezoz/topiary-4.5.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-04-09T13:50:04,229 adding 'tests/__init__.py' 2026-04-09T13:50:04,231 adding 'tests/common.py' 2026-04-09T13:50:04,232 adding 'tests/data.py' 2026-04-09T13:50:04,234 adding 'tests/test_args_outputs.py' 2026-04-09T13:50:04,235 adding 'tests/test_cli_protein_changes.py' 2026-04-09T13:50:04,237 adding 'tests/test_contains_mutant_residues.py' 2026-04-09T13:50:04,238 adding 'tests/test_coverage_gaps.py' 2026-04-09T13:50:04,240 adding 'tests/test_dataframe.py' 2026-04-09T13:50:04,241 adding 'tests/test_direct_input_regressions.py' 2026-04-09T13:50:04,244 adding 'tests/test_dsl_extensions.py' 2026-04-09T13:50:04,245 adding 'tests/test_effect_expression_filters.py' 2026-04-09T13:50:04,247 adding 'tests/test_end_to_end.py' 2026-04-09T13:50:04,249 adding 'tests/test_epitopes_from_commandline_args.py' 2026-04-09T13:50:04,250 adding 'tests/test_inputs.py' 2026-04-09T13:50:04,252 adding 'tests/test_integration.py' 2026-04-09T13:50:04,253 adding 'tests/test_load_cufflinks_fpkm.py' 2026-04-09T13:50:04,255 adding 'tests/test_load_stringtie_gtf_fpkm.py' 2026-04-09T13:50:04,256 adding 'tests/test_mutant_epitope_predictions_class1.py' 2026-04-09T13:50:04,258 adding 'tests/test_mutant_epitope_predictions_class2.py' 2026-04-09T13:50:04,259 adding 'tests/test_padding.py' 2026-04-09T13:50:04,261 adding 'tests/test_peptide_mutation_interval.py' 2026-04-09T13:50:04,264 adding 'tests/test_ranking.py' 2026-04-09T13:50:04,266 adding 'tests/test_rna_helpers.py' 2026-04-09T13:50:04,267 adding 'tests/test_sources.py' 2026-04-09T13:50:04,268 adding 'tests/test_sources_optional.py' 2026-04-09T13:50:04,270 adding 'tests/test_validation_and_edge_cases.py' 2026-04-09T13:50:04,272 adding 'tests/test_variant_expression_filters.py' 2026-04-09T13:50:04,274 adding 'topiary/__init__.py' 2026-04-09T13:50:04,275 adding 'topiary/filters.py' 2026-04-09T13:50:04,277 adding 'topiary/inputs.py' 2026-04-09T13:50:04,279 adding 'topiary/predictor.py' 2026-04-09T13:50:04,281 adding 'topiary/properties.py' 2026-04-09T13:50:04,286 adding 'topiary/ranking.py' 2026-04-09T13:50:04,287 adding 'topiary/sequence_helpers.py' 2026-04-09T13:50:04,289 adding 'topiary/sources.py' 2026-04-09T13:50:04,291 adding 'topiary/cli/__init__.py' 2026-04-09T13:50:04,293 adding 'topiary/cli/args.py' 2026-04-09T13:50:04,294 adding 'topiary/cli/errors.py' 2026-04-09T13:50:04,295 adding 'topiary/cli/filtering.py' 2026-04-09T13:50:04,297 adding 'topiary/cli/outputs.py' 2026-04-09T13:50:04,298 adding 'topiary/cli/protein_changes.py' 2026-04-09T13:50:04,300 adding 'topiary/cli/rna.py' 2026-04-09T13:50:04,301 adding 'topiary/cli/script.py' 2026-04-09T13:50:04,302 adding 'topiary/cli/sequence.py' 2026-04-09T13:50:04,304 adding 'topiary/rna/__init__.py' 2026-04-09T13:50:04,305 adding 'topiary/rna/common.py' 2026-04-09T13:50:04,307 adding 'topiary/rna/cufflinks.py' 2026-04-09T13:50:04,308 adding 'topiary/rna/gtf.py' 2026-04-09T13:50:04,312 adding 'topiary-4.5.0.dist-info/licenses/LICENSE' 2026-04-09T13:50:04,314 adding 'topiary-4.5.0.dist-info/METADATA' 2026-04-09T13:50:04,315 adding 'topiary-4.5.0.dist-info/WHEEL' 2026-04-09T13:50:04,316 adding 'topiary-4.5.0.dist-info/entry_points.txt' 2026-04-09T13:50:04,317 adding 'topiary-4.5.0.dist-info/top_level.txt' 2026-04-09T13:50:04,318 adding 'topiary-4.5.0.dist-info/RECORD' 2026-04-09T13:50:04,321 removing build/bdist.linux-armv7l/wheel 2026-04-09T13:50:04,433 Building wheel for topiary (pyproject.toml): finished with status 'done' 2026-04-09T13:50:04,438 Created wheel for topiary: filename=topiary-4.5.0-py3-none-any.whl size=87207 sha256=dc54958dc3af7a04e37dcc4b4bb0caacec6f5906cfb175fbe56dc54c5d5a8215 2026-04-09T13:50:04,439 Stored in directory: /tmp/pip-ephem-wheel-cache-h8530_v1/wheels/20/96/8d/168b21ac67ccc104bddc5729379f46cebe46446a5ae253bf4a 2026-04-09T13:50:04,453 Successfully built topiary 2026-04-09T13:50:04,459 Removed build tracker: '/tmp/pip-build-tracker-n2ao_rms'