2026-04-09T16:50:26,458 Created temporary directory: /tmp/pip-ephem-wheel-cache-100zgli3 2026-04-09T16:50:26,460 Created temporary directory: /tmp/pip-build-tracker-agx5zmw2 2026-04-09T16:50:26,460 Initialized build tracking at /tmp/pip-build-tracker-agx5zmw2 2026-04-09T16:50:26,461 Created build tracker: /tmp/pip-build-tracker-agx5zmw2 2026-04-09T16:50:26,461 Entered build tracker: /tmp/pip-build-tracker-agx5zmw2 2026-04-09T16:50:26,462 Created temporary directory: /tmp/pip-wheel-g0gzottu 2026-04-09T16:50:26,464 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-09T16:50:26,467 Created temporary directory: /tmp/pip-ephem-wheel-cache-n8o6hmpt 2026-04-09T16:50:26,488 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-09T16:50:26,492 2 location(s) to search for versions of pirlygenes: 2026-04-09T16:50:26,492 * https://pypi.org/simple/pirlygenes/ 2026-04-09T16:50:26,492 * https://www.piwheels.org/simple/pirlygenes/ 2026-04-09T16:50:26,493 Fetching project page and analyzing links: https://pypi.org/simple/pirlygenes/ 2026-04-09T16:50:26,493 Getting page https://pypi.org/simple/pirlygenes/ 2026-04-09T16:50:26,495 Found index url https://pypi.org/simple 2026-04-09T16:50:26,734 Fetched page https://pypi.org/simple/pirlygenes/ as application/vnd.pypi.simple.v1+json 2026-04-09T16:50:26,750 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/2e/66/a994711ece0c32dc4037b2c20acb069375f8eb2c80bdcca3a9efa47fdaee/pirlygenes-1.7.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:26,751 Found link https://files.pythonhosted.org/packages/17/fe/bcdacc3535105e4aed789ffd67937b0a725f5eaf16e19e2d70d7d9994985/pirlygenes-1.7.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 1.7.0 2026-04-09T16:50:26,752 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/59/b0/3e2df98a4c7e570e430d5a43b78c4325669dc94f670df919535730ad97e4/pirlygenes-1.8.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:26,753 Found link https://files.pythonhosted.org/packages/4b/7c/57808dd823cb43e0775fef54e28607a61d6e34549ef6c21f02e85567e13a/pirlygenes-1.8.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 1.8.0 2026-04-09T16:50:26,754 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/9a/8d/f18f1d145c3cc415d28137493c5cb8e758516d9ac9633fc74cb4f86a318a/pirlygenes-1.8.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:26,755 Found link https://files.pythonhosted.org/packages/61/0c/c3f0aff27c3758ba3f3ee1f4a63a05238e02043251af230032d9ba555624/pirlygenes-1.8.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 1.8.1 2026-04-09T16:50:26,756 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/24/35/2c1111a823202625bf5719038d745faaa60ed3613bc790db7a365d0d9e91/pirlygenes-1.9.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:26,757 Found link https://files.pythonhosted.org/packages/00/21/33762d0e1497cb8f52920f8804591991b077145275a9bb472d54cb34bd3b/pirlygenes-1.9.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 1.9.0 2026-04-09T16:50:26,757 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/da/14/c0e64534396352276e63b247458c9b5db4f43c4d36ecba3f447203f1bed8/pirlygenes-2.0.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:26,758 Found link https://files.pythonhosted.org/packages/1a/15/da113c10028ce6cef9359672f0d6309ef13174410f74bd641ab56fe968e1/pirlygenes-2.0.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.0.0 2026-04-09T16:50:26,759 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/ef/67/1ca24d76bbfbb8547103f0c887d0215b8689b9d68ca03b8e63245446d85f/pirlygenes-2.0.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:26,760 Found link https://files.pythonhosted.org/packages/f0/57/519f98c3e3ce7414973c34a35b56e0123e63c2397c1c28a40f52096110e8/pirlygenes-2.0.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.0.1 2026-04-09T16:50:26,761 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/b2/a5/eb85bc710dc92ed90930681df0d0727ba7c8adce5f597218b60c8e749abb/pirlygenes-2.1.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:26,762 Found link https://files.pythonhosted.org/packages/ac/1c/535ab059a16f501c104975a9afdbe26292625c5f6b4565dfaff29827dae5/pirlygenes-2.1.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.1.0 2026-04-09T16:50:26,762 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/31/67/9fb299b51b80ea11807d6cca24343e9b5bcd4f343f5590f443f4ab27d256/pirlygenes-2.2.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:26,763 Found link https://files.pythonhosted.org/packages/de/bc/dcd2f53a5eb6548d7c18e70463efb3f452b5d8baacde0faf0c91fe00ce06/pirlygenes-2.2.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.2.0 2026-04-09T16:50:26,764 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/4d/d7/cc21525563dbe1ac4f165f25a3e301a8a8547316b959381b70653d000f17/pirlygenes-2.2.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:26,764 Found link https://files.pythonhosted.org/packages/1b/ca/c2c092e3d7b516325863b5b1d57c5be9837f8e60557858ef52efb985aa0d/pirlygenes-2.2.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.2.1 2026-04-09T16:50:26,765 Skipping link: No binaries permitted for pirlygenes: 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2026-04-09T16:50:26,769 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/8a/44/da6370091aea72fec9b67e936a15ae4ebdf9dff908aa9d19047e94159d04/pirlygenes-2.3.2-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:26,770 Found link https://files.pythonhosted.org/packages/10/a9/907cc4508814906e8c990c01f4f5a8e876d8494a06e48b3231bc8cb0fc76/pirlygenes-2.3.2.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.3.2 2026-04-09T16:50:26,770 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/3f/b6/830da154d45d5ac46ae4fec7615e8cad6fdc54a8977e3ad5d5b719b3e381/pirlygenes-2.4.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:26,771 Found link https://files.pythonhosted.org/packages/72/cb/85849617feaf50f329a0545583033d697e353ad48f34484f70c94a38a7fe/pirlygenes-2.4.0.tar.gz (from 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https://files.pythonhosted.org/packages/6a/f7/cd7bb912ebd9a8fd5678378444dd4cbf57614f841b83aca8d8ae68221512/pirlygenes-2.4.2.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.4.2 2026-04-09T16:50:26,775 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/06/ba/c6259e141db6ae01ab36e9b24878291184fa9551fbba7d8cc122d162370a/pirlygenes-2.5.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:26,776 Found link https://files.pythonhosted.org/packages/2a/02/a683073293d6e1567e993c5ddeb5b4f20cecf9c143b7c34ca69c6b0fe0bf/pirlygenes-2.5.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.5.0 2026-04-09T16:50:26,776 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/3b/3a/d237a82d8794a11a26a1ef9bfff88a11e9bdf47b1f6505e328954ced2b0e/pirlygenes-2.5.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:26,777 Found link https://files.pythonhosted.org/packages/b5/e2/879e92ab87381e4ef635263624155d4f2331588bc05aea8a223225f108f7/pirlygenes-2.5.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.5.1 2026-04-09T16:50:26,778 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/a4/c0/3c64fac1cdedad5802d2905b10f836c5a5d805a9dc0d0beeda285a065df3/pirlygenes-2.6.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:26,779 Found link https://files.pythonhosted.org/packages/2a/df/7ffd654f123a21c608210fe4ed416bda8e56ceb36743d27a8fa4b9eace1e/pirlygenes-2.6.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.6.0 2026-04-09T16:50:26,780 Skipping link: No binaries permitted for pirlygenes: 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2026-04-09T16:50:26,783 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/57/7c/f087e5968735238e4782164c5af185405be0eec060121b61c187f5c55429/pirlygenes-2.7.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:26,784 Found link https://files.pythonhosted.org/packages/0a/9f/6f1a18016493c71ae63b236e4e5186535b85f15188b969cfded686dec47a/pirlygenes-2.7.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.7.1 2026-04-09T16:50:26,785 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/34/d6/ffd2ae0d7511cb22ee2b857520a19acb21ff834f8d8baaa2e70c4c542d7f/pirlygenes-2.8.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:26,785 Found link https://files.pythonhosted.org/packages/33/84/8cd197f6dc1169477bc562d9d667a30ccb0488747c3fe5682e91dea7e16c/pirlygenes-2.8.0.tar.gz (from 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https://files.pythonhosted.org/packages/03/67/397c32dc784ffe221594942327557e0505efa8edd5ac85e59d057bda1121/pirlygenes-3.3.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 3.3.0 2026-04-09T16:50:26,803 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/26/3e/62f1c9e48cf8b46832d4e22350d43ca9b9b1727c09f62d4816bbd0c1a829/pirlygenes-3.4.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:26,804 Found link https://files.pythonhosted.org/packages/ae/c8/3b250046299c1580879c599abf75f7d60c2738bb96370b9cde6e227d5c10/pirlygenes-3.4.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 3.4.0 2026-04-09T16:50:26,805 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/82/e2/0d21f32eba6f7bcc9f9a95150b894b8c7a997d0176593bb4249984c3cd01/pirlygenes-3.5.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:26,806 Found link https://files.pythonhosted.org/packages/33/17/f44bcba8f107403c24713c54db0069b1c58cd3615b33e9fc1e2ea3c6a08e/pirlygenes-3.5.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 3.5.0 2026-04-09T16:50:26,807 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/fe/15/14dd692b6271ae9dd1b499e4eff8ff976ae1e1805cf9ae4508f28a03b94e/pirlygenes-3.6.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:26,808 Found link https://files.pythonhosted.org/packages/99/50/76bd9309b55c9aad5207ecb227e378a72598cde3dff280e893e0f86fc7b3/pirlygenes-3.6.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 3.6.0 2026-04-09T16:50:26,808 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/a8/ed/7f75d0adfa6e8af7ea18fd448a9dfbc02a0199f004a43c251c7681d108e0/pirlygenes-3.7.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:26,809 Found link https://files.pythonhosted.org/packages/fc/a4/2e58d0546b2569b8d6b6444a74fa68e260bcd76dfc198ed4bf1f11252d21/pirlygenes-3.7.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 3.7.0 2026-04-09T16:50:26,810 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/b0/a5/dfccadf641fc276f4e848b40b9297bae96af9c5bd6c36cdfd7cb5df8d97f/pirlygenes-3.8.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:26,811 Found link https://files.pythonhosted.org/packages/ce/ec/a6a9a1a7632a181d6422d471776e25891c4a1873f127dc8a83f00530d083/pirlygenes-3.8.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 3.8.0 2026-04-09T16:50:26,811 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/63/9f/fe0905ab5f99a8e1c0491e43c30f03fd31df61447766dcf07308d2d4829a/pirlygenes-3.9.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:26,812 Found link https://files.pythonhosted.org/packages/77/f4/42d1934a81aab783c92e9bed5cde68184809b7a3a3d7f73cbc4225f5f28a/pirlygenes-3.9.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 3.9.0 2026-04-09T16:50:26,813 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/d9/76/d9e49cd695418f80da8adf7e30971d5232666ec000992b4959a2bb53f63a/pirlygenes-3.9.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:26,814 Found link https://files.pythonhosted.org/packages/9b/b9/a28be5696e895e3229f3a611d24ee1edec3bb78aa7905b6f20703a49209f/pirlygenes-3.9.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 3.9.1 2026-04-09T16:50:26,814 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/8a/59/9507a97ebf465eec752e729df982858d933849c60314b86b38b8f4926966/pirlygenes-3.13.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:26,815 Found link https://files.pythonhosted.org/packages/89/cd/c22ef54a6eedf25f8d747255942927c14e6975582b7ccce33a4b2d5dbeca/pirlygenes-3.13.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 3.13.0 2026-04-09T16:50:26,816 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/cd/42/3bef2c9a65c73c1925afdec829e817a4884b8001c465300355887df8fc95/pirlygenes-3.14.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:26,817 Found link https://files.pythonhosted.org/packages/42/60/ea5372671c9ce137a559ba1e8a965a4fdccd9e4c57d26118af470ce65fa2/pirlygenes-3.14.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 3.14.0 2026-04-09T16:50:26,817 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/99/ef/058a7c8eb42bb729987019a09ea7ac8bce60761a74d0b3b9cb822dda57ec/pirlygenes-3.14.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:26,818 Found link https://files.pythonhosted.org/packages/76/d3/be1ff53951096871a3ef1f6d936a7172333da24b3575db5f321a2eebb5e9/pirlygenes-3.14.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 3.14.1 2026-04-09T16:50:26,819 Fetching project page and analyzing links: https://www.piwheels.org/simple/pirlygenes/ 2026-04-09T16:50:26,820 Getting page https://www.piwheels.org/simple/pirlygenes/ 2026-04-09T16:50:26,821 Found index url https://www.piwheels.org/simple 2026-04-09T16:50:27,008 Fetched page https://www.piwheels.org/simple/pirlygenes/ as text/html 2026-04-09T16:50:27,020 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-3.13.0-py3-none-any.whl#sha256=714cca4f7ed4becf11d1a06faaac0767c47e5abdad0ae798f639014a483f310a (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:27,020 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-3.9.1-py3-none-any.whl#sha256=01c3382cd3a9e5b1098522145014e000ced5cb416e8bb9b0b0a4342fb73d3861 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:27,021 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-3.9.0-py3-none-any.whl#sha256=8a5d019750603a574ab513958ccda679a3fb9bc3fc5e0bf9ee3a4ab981ce11cd (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:27,021 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-3.8.0-py3-none-any.whl#sha256=8647e92b624b8f8e566be6ac2fe3db4da2c918e4b50e72f19c44ef7091244be9 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:27,022 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-3.7.0-py3-none-any.whl#sha256=314bf8c48fa380a0f57c6db57a0cc51ff515eb8bcbe76f35efcd288708c8db22 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:27,022 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-3.6.0-py3-none-any.whl#sha256=102d759271fe20631692f659a53b89532340331dd43449ebd9b2ecb9b1227904 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:27,023 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-3.5.0-py3-none-any.whl#sha256=ed66b0d6ee8bce3057a9eee4e3479cb013f235ada0d0b65385f2b9c28d03bf78 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:27,023 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-3.4.0-py3-none-any.whl#sha256=3163d9bc66fc382f57d04c43c6e1aa6686b86b6149cc0d0950943eae1713f354 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:27,024 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-3.3.0-py3-none-any.whl#sha256=63aa8303d4a13748d514a39bb8efe52dc60565cff43ad06dd76a653967ccb33a (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:27,025 Skipping link: No binaries permitted for pirlygenes: 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https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.5.1-py3-none-any.whl#sha256=b097b3f8b48f33c23fc888588f0644e92b3b973d37536ae992576cff3d2c550a (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:27,034 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.5.0-py3-none-any.whl#sha256=7ed846a4e0950617d0103bb8a51b54f0f00bfa982caa83c9013067f52251e39e (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:27,035 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.4.2-py3-none-any.whl#sha256=25793e34918b22dc36562123fdf4e753df72f9cc712aa69c1f151b96a09ab68a (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:27,035 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.4.1-py3-none-any.whl#sha256=a8a045cb5d44a0dc2d8d5b5d15f847d44c7fcbf4e65dfb65be5127275d30604c (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:27,036 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.4.0-py3-none-any.whl#sha256=06c550405b77c1a7f42776114270baca28b88844cd57d5a0f5e0ed554ee215dc (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:27,036 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.3.2-py3-none-any.whl#sha256=dc55fdcf24cb20e6e920706a735f11dc23aaaf50051f4a01414854d27c76e89f (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:27,036 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.3.1-py3-none-any.whl#sha256=c90c60420627308e8f538bbaa1306ced6e7699e82818b6016119c5b5661936b0 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:27,037 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.3.0-py3-none-any.whl#sha256=88bf981b5ba9b7fa0a46232499d049d3faafaf76e258e3d09e1b65ba9f97b22d (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:27,037 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.2.1-py3-none-any.whl#sha256=5327c129eaf178c76a60b5257dfe32546f0c09dd8881ddb296f458e11934ccf7 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:27,038 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.2.0-py3-none-any.whl#sha256=09718fb06f1ce838406a07641c7df1df1ff56ad9bcca5e70f0dabeabf18d9eb6 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:27,038 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.1.0-py3-none-any.whl#sha256=6e0978a40a4b6a16e6e44012574ac0838b0abf01a40770a2b4c8e7db2aa583a6 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:27,039 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.0.1-py3-none-any.whl#sha256=0956b5fd3f21d43dea90b38bbc06628b327c49504aa0fc53d3d81d55208c6f5f (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:27,040 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-2.0.0-py3-none-any.whl#sha256=de738501d014cdb6760b96e01afa7d18cb8dac3d863d433e9ce8fce0172641f5 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:27,040 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-1.9.0-py3-none-any.whl#sha256=3be90370a11cc9b33de80e02b84f99700133addc5994e35bcb8b80b76f09f8ae (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:27,041 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-1.8.1-py3-none-any.whl#sha256=35f8427ceac3714bb6339609b7f3602ea81ea8b5642c4e760931e9a28263a28b (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:27,041 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-1.8.0-py3-none-any.whl#sha256=202a232caf63d7ad6c6d202e8d8c6c3f52bb57aa7bd124b14be89597a4637f02 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:27,042 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-1.7.0-py3-none-any.whl#sha256=01a45cdf8948ae1d8a8034363ecd9357088d1df4c99ffb9370f8d68432ff4fa7 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-09T16:50:27,043 Skipping link: not a file: https://www.piwheels.org/simple/pirlygenes/ 2026-04-09T16:50:27,043 Skipping link: not a file: https://pypi.org/simple/pirlygenes/ 2026-04-09T16:50:27,068 Given no hashes to check 1 links for project 'pirlygenes': discarding no candidates 2026-04-09T16:50:27,088 Collecting pirlygenes==3.14.0 2026-04-09T16:50:27,090 Created temporary directory: /tmp/pip-unpack-lzjs67y_ 2026-04-09T16:50:27,333 Downloading pirlygenes-3.14.0.tar.gz (4.9 MB) 2026-04-09T16:50:28,806 Added pirlygenes==3.14.0 from https://files.pythonhosted.org/packages/42/60/ea5372671c9ce137a559ba1e8a965a4fdccd9e4c57d26118af470ce65fa2/pirlygenes-3.14.0.tar.gz to build tracker '/tmp/pip-build-tracker-agx5zmw2' 2026-04-09T16:50:28,812 Created temporary directory: /tmp/pip-build-env-r8cm62zo 2026-04-09T16:50:28,816 Installing build dependencies: started 2026-04-09T16:50:28,817 Running command pip subprocess to install build dependencies 2026-04-09T16:50:29,949 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-04-09T16:50:30,381 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-09T16:50:30,404 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-09T16:50:32,199 Collecting setuptools>=60 2026-04-09T16:50:32,282 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-04-09T16:50:32,666 Collecting setuptools-scm>=8.0 2026-04-09T16:50:32,680 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl (21 kB) 2026-04-09T16:50:32,762 Collecting vcs-versioning>=1.0.0.dev0 2026-04-09T16:50:32,779 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl (79 kB) 2026-04-09T16:50:32,957 Collecting packaging>=20 2026-04-09T16:50:32,974 Using cached https://www.piwheels.org/simple/packaging/packaging-26.0-py3-none-any.whl (74 kB) 2026-04-09T16:50:35,967 Installing collected packages: setuptools, packaging, vcs-versioning, setuptools-scm 2026-04-09T16:50:39,503 Creating /tmp/pip-build-env-r8cm62zo/overlay/local/bin 2026-04-09T16:50:39,505 changing mode of /tmp/pip-build-env-r8cm62zo/overlay/local/bin/vcs-versioning to 755 2026-04-09T16:50:39,609 changing mode of /tmp/pip-build-env-r8cm62zo/overlay/local/bin/setuptools-scm to 755 2026-04-09T16:50:39,636 Successfully installed packaging-26.0 setuptools-82.0.1 setuptools-scm-10.0.5 vcs-versioning-1.1.1 2026-04-09T16:50:39,922 Installing build dependencies: finished with status 'done' 2026-04-09T16:50:39,937 Getting requirements to build wheel: started 2026-04-09T16:50:39,938 Running command Getting requirements to build wheel 2026-04-09T16:50:40,625 toml section missing PosixPath('pyproject.toml') does not contain any of the tool sections: ['setuptools_scm', 'vcs-versioning'] 2026-04-09T16:50:40,740 /tmp/pip-build-env-r8cm62zo/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-09T16:50:40,740 !! 2026-04-09T16:50:40,742 ******************************************************************************** 2026-04-09T16:50:40,742 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-09T16:50:40,743 License :: OSI Approved :: Apache Software License 2026-04-09T16:50:40,744 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-09T16:50:40,744 ******************************************************************************** 2026-04-09T16:50:40,745 !! 2026-04-09T16:50:40,746 dist._finalize_license_expression() 2026-04-09T16:50:40,746 /tmp/pip-build-env-r8cm62zo/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-09T16:50:40,746 !! 2026-04-09T16:50:40,747 ******************************************************************************** 2026-04-09T16:50:40,748 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-09T16:50:40,749 License :: OSI Approved :: Apache Software License 2026-04-09T16:50:40,750 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-09T16:50:40,750 ******************************************************************************** 2026-04-09T16:50:40,751 !! 2026-04-09T16:50:40,752 self._finalize_license_expression() 2026-04-09T16:50:40,755 running egg_info 2026-04-09T16:50:40,764 writing pirlygenes.egg-info/PKG-INFO 2026-04-09T16:50:40,768 writing dependency_links to pirlygenes.egg-info/dependency_links.txt 2026-04-09T16:50:40,770 writing entry points to pirlygenes.egg-info/entry_points.txt 2026-04-09T16:50:40,771 writing requirements to pirlygenes.egg-info/requires.txt 2026-04-09T16:50:40,772 writing top-level names to pirlygenes.egg-info/top_level.txt 2026-04-09T16:50:40,853 /tmp/pip-build-env-r8cm62zo/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-04-09T16:50:40,854 return get_active_overrides().subprocess_timeout 2026-04-09T16:50:40,861 listing git files failed - pretending there aren't any 2026-04-09T16:50:40,870 reading manifest file 'pirlygenes.egg-info/SOURCES.txt' 2026-04-09T16:50:40,878 adding license file 'LICENSE' 2026-04-09T16:50:40,883 writing manifest file 'pirlygenes.egg-info/SOURCES.txt' 2026-04-09T16:50:40,987 Getting requirements to build wheel: finished with status 'done' 2026-04-09T16:50:40,991 Created temporary directory: /tmp/pip-modern-metadata-hi5jdxgm 2026-04-09T16:50:40,993 Preparing metadata (pyproject.toml): started 2026-04-09T16:50:40,994 Running command Preparing metadata (pyproject.toml) 2026-04-09T16:50:41,593 toml section missing PosixPath('pyproject.toml') does not contain any of the tool sections: ['setuptools_scm', 'vcs-versioning'] 2026-04-09T16:50:41,699 /tmp/pip-build-env-r8cm62zo/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-09T16:50:41,700 !! 2026-04-09T16:50:41,701 ******************************************************************************** 2026-04-09T16:50:41,701 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-09T16:50:41,703 License :: OSI Approved :: Apache Software License 2026-04-09T16:50:41,704 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-09T16:50:41,704 ******************************************************************************** 2026-04-09T16:50:41,706 !! 2026-04-09T16:50:41,706 dist._finalize_license_expression() 2026-04-09T16:50:41,706 /tmp/pip-build-env-r8cm62zo/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-09T16:50:41,707 !! 2026-04-09T16:50:41,708 ******************************************************************************** 2026-04-09T16:50:41,708 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-09T16:50:41,710 License :: OSI Approved :: Apache Software License 2026-04-09T16:50:41,711 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-09T16:50:41,711 ******************************************************************************** 2026-04-09T16:50:41,712 !! 2026-04-09T16:50:41,713 self._finalize_license_expression() 2026-04-09T16:50:41,714 running dist_info 2026-04-09T16:50:41,728 creating /tmp/pip-modern-metadata-hi5jdxgm/pirlygenes.egg-info 2026-04-09T16:50:41,729 writing /tmp/pip-modern-metadata-hi5jdxgm/pirlygenes.egg-info/PKG-INFO 2026-04-09T16:50:41,733 writing dependency_links to /tmp/pip-modern-metadata-hi5jdxgm/pirlygenes.egg-info/dependency_links.txt 2026-04-09T16:50:41,734 writing entry points to /tmp/pip-modern-metadata-hi5jdxgm/pirlygenes.egg-info/entry_points.txt 2026-04-09T16:50:41,736 writing requirements to /tmp/pip-modern-metadata-hi5jdxgm/pirlygenes.egg-info/requires.txt 2026-04-09T16:50:41,737 writing top-level names to /tmp/pip-modern-metadata-hi5jdxgm/pirlygenes.egg-info/top_level.txt 2026-04-09T16:50:41,738 writing manifest file '/tmp/pip-modern-metadata-hi5jdxgm/pirlygenes.egg-info/SOURCES.txt' 2026-04-09T16:50:41,775 /tmp/pip-build-env-r8cm62zo/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-04-09T16:50:41,775 return get_active_overrides().subprocess_timeout 2026-04-09T16:50:41,781 listing git files failed - pretending there aren't any 2026-04-09T16:50:41,789 reading manifest file '/tmp/pip-modern-metadata-hi5jdxgm/pirlygenes.egg-info/SOURCES.txt' 2026-04-09T16:50:41,791 adding license file 'LICENSE' 2026-04-09T16:50:41,794 writing manifest file '/tmp/pip-modern-metadata-hi5jdxgm/pirlygenes.egg-info/SOURCES.txt' 2026-04-09T16:50:41,795 creating '/tmp/pip-modern-metadata-hi5jdxgm/pirlygenes-3.14.0.dist-info' 2026-04-09T16:50:41,930 Preparing metadata (pyproject.toml): finished with status 'done' 2026-04-09T16:50:41,935 Source in /tmp/pip-wheel-g0gzottu/pirlygenes_e5669493f1f34360b8ca33e2dfbef084 has version 3.14.0, which satisfies requirement pirlygenes==3.14.0 from https://files.pythonhosted.org/packages/42/60/ea5372671c9ce137a559ba1e8a965a4fdccd9e4c57d26118af470ce65fa2/pirlygenes-3.14.0.tar.gz 2026-04-09T16:50:41,936 Removed pirlygenes==3.14.0 from https://files.pythonhosted.org/packages/42/60/ea5372671c9ce137a559ba1e8a965a4fdccd9e4c57d26118af470ce65fa2/pirlygenes-3.14.0.tar.gz from build tracker '/tmp/pip-build-tracker-agx5zmw2' 2026-04-09T16:50:41,943 Created temporary directory: /tmp/pip-unpack-z3m0g_hq 2026-04-09T16:50:41,943 Building wheels for collected packages: pirlygenes 2026-04-09T16:50:41,947 Created temporary directory: /tmp/pip-wheel-vayka_pf 2026-04-09T16:50:41,948 Destination directory: /tmp/pip-wheel-vayka_pf 2026-04-09T16:50:41,950 Building wheel for pirlygenes (pyproject.toml): started 2026-04-09T16:50:41,951 Running command Building wheel for pirlygenes (pyproject.toml) 2026-04-09T16:50:42,539 toml section missing PosixPath('pyproject.toml') does not contain any of the tool sections: ['setuptools_scm', 'vcs-versioning'] 2026-04-09T16:50:42,639 /tmp/pip-build-env-r8cm62zo/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-09T16:50:42,640 !! 2026-04-09T16:50:42,641 ******************************************************************************** 2026-04-09T16:50:42,641 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-09T16:50:42,642 License :: OSI Approved :: Apache Software License 2026-04-09T16:50:42,643 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-09T16:50:42,644 ******************************************************************************** 2026-04-09T16:50:42,645 !! 2026-04-09T16:50:42,645 dist._finalize_license_expression() 2026-04-09T16:50:42,646 /tmp/pip-build-env-r8cm62zo/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-09T16:50:42,646 !! 2026-04-09T16:50:42,647 ******************************************************************************** 2026-04-09T16:50:42,647 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-09T16:50:42,648 License :: OSI Approved :: Apache Software License 2026-04-09T16:50:42,649 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-09T16:50:42,650 ******************************************************************************** 2026-04-09T16:50:42,651 !! 2026-04-09T16:50:42,651 self._finalize_license_expression() 2026-04-09T16:50:42,652 running bdist_wheel 2026-04-09T16:50:42,675 running build 2026-04-09T16:50:42,675 running build_py 2026-04-09T16:50:42,677 creating build/lib/pirlygenes 2026-04-09T16:50:42,679 copying pirlygenes/load_expression.py -> build/lib/pirlygenes 2026-04-09T16:50:42,682 copying pirlygenes/aggregate_gene_expression.py -> build/lib/pirlygenes 2026-04-09T16:50:42,684 copying pirlygenes/gene_ids.py -> build/lib/pirlygenes 2026-04-09T16:50:42,686 copying pirlygenes/common.py -> build/lib/pirlygenes 2026-04-09T16:50:42,688 copying pirlygenes/plot.py -> build/lib/pirlygenes 2026-04-09T16:50:42,694 copying pirlygenes/tumor_purity.py -> build/lib/pirlygenes 2026-04-09T16:50:42,696 copying pirlygenes/plot_data_helpers.py -> build/lib/pirlygenes 2026-04-09T16:50:42,699 copying pirlygenes/__init__.py -> build/lib/pirlygenes 2026-04-09T16:50:42,701 copying pirlygenes/load_dataset.py -> build/lib/pirlygenes 2026-04-09T16:50:42,703 copying pirlygenes/version.py -> build/lib/pirlygenes 2026-04-09T16:50:42,704 copying pirlygenes/gene_names.py -> build/lib/pirlygenes 2026-04-09T16:50:42,706 copying pirlygenes/gene_sets_cancer.py -> build/lib/pirlygenes 2026-04-09T16:50:42,710 copying pirlygenes/transcript_to_gene.py -> build/lib/pirlygenes 2026-04-09T16:50:42,712 copying pirlygenes/cli.py -> build/lib/pirlygenes 2026-04-09T16:50:42,714 running egg_info 2026-04-09T16:50:42,729 writing pirlygenes.egg-info/PKG-INFO 2026-04-09T16:50:42,733 writing dependency_links to pirlygenes.egg-info/dependency_links.txt 2026-04-09T16:50:42,735 writing entry points to pirlygenes.egg-info/entry_points.txt 2026-04-09T16:50:42,736 writing requirements to pirlygenes.egg-info/requires.txt 2026-04-09T16:50:42,737 writing top-level names to pirlygenes.egg-info/top_level.txt 2026-04-09T16:50:42,768 /tmp/pip-build-env-r8cm62zo/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-04-09T16:50:42,768 return get_active_overrides().subprocess_timeout 2026-04-09T16:50:42,775 listing git files failed - pretending there aren't any 2026-04-09T16:50:42,782 reading manifest file 'pirlygenes.egg-info/SOURCES.txt' 2026-04-09T16:50:42,788 adding license file 'LICENSE' 2026-04-09T16:50:42,793 writing manifest file 'pirlygenes.egg-info/SOURCES.txt' 2026-04-09T16:50:42,796 /tmp/pip-build-env-r8cm62zo/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'pirlygenes.data' is absent from the `packages` configuration. 2026-04-09T16:50:42,796 !! 2026-04-09T16:50:42,797 ******************************************************************************** 2026-04-09T16:50:42,798 ############################ 2026-04-09T16:50:42,798 # Package would be ignored # 2026-04-09T16:50:42,799 ############################ 2026-04-09T16:50:42,799 Python recognizes 'pirlygenes.data' as an importable package[^1], 2026-04-09T16:50:42,800 but it is absent from setuptools' `packages` configuration. 2026-04-09T16:50:42,801 This leads to an ambiguous overall configuration. If you want to distribute this 2026-04-09T16:50:42,801 package, please make sure that 'pirlygenes.data' is explicitly added 2026-04-09T16:50:42,801 to the `packages` configuration field. 2026-04-09T16:50:42,802 Alternatively, you can also rely on setuptools' discovery methods 2026-04-09T16:50:42,803 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-04-09T16:50:42,804 instead of `find_packages(...)`/`find:`). 2026-04-09T16:50:42,805 You can read more about "package discovery" on setuptools documentation page: 2026-04-09T16:50:42,806 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-04-09T16:50:42,807 If you don't want 'pirlygenes.data' to be distributed and are 2026-04-09T16:50:42,807 already explicitly excluding 'pirlygenes.data' via 2026-04-09T16:50:42,808 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-04-09T16:50:42,809 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-04-09T16:50:42,809 combination with a more fine grained `package-data` configuration. 2026-04-09T16:50:42,810 You can read more about "package data files" on setuptools documentation page: 2026-04-09T16:50:42,811 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-04-09T16:50:42,812 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-04-09T16:50:42,813 even if it does not contain any `.py` files. 2026-04-09T16:50:42,813 On the other hand, currently there is no concept of package data 2026-04-09T16:50:42,814 directory, all directories are treated like packages. 2026-04-09T16:50:42,814 ******************************************************************************** 2026-04-09T16:50:42,815 !! 2026-04-09T16:50:42,816 check.warn(importable) 2026-04-09T16:50:42,816 copying pirlygenes/PLAN-1.4.0-radioligand.md -> build/lib/pirlygenes 2026-04-09T16:50:42,817 creating build/lib/pirlygenes/data 2026-04-09T16:50:42,817 copying pirlygenes/data/ADC-approved.csv -> build/lib/pirlygenes/data 2026-04-09T16:50:42,818 copying pirlygenes/data/ADC-trials.csv -> build/lib/pirlygenes/data 2026-04-09T16:50:42,819 copying pirlygenes/data/ADC-withdrawn.csv -> build/lib/pirlygenes/data 2026-04-09T16:50:42,819 copying pirlygenes/data/CAR-T-approved.csv -> build/lib/pirlygenes/data 2026-04-09T16:50:42,820 copying pirlygenes/data/TCR-T-approved.csv -> build/lib/pirlygenes/data 2026-04-09T16:50:42,820 copying pirlygenes/data/TCR-T-trials.csv -> build/lib/pirlygenes/data 2026-04-09T16:50:42,821 copying pirlygenes/data/bispecific-antibodies-approved.csv -> build/lib/pirlygenes/data 2026-04-09T16:50:42,823 copying pirlygenes/data/cancer-driver-genes.csv -> build/lib/pirlygenes/data 2026-04-09T16:50:42,826 copying pirlygenes/data/cancer-driver-variants.csv -> build/lib/pirlygenes/data 2026-04-09T16:50:42,829 copying pirlygenes/data/cancer-surfaceome.csv -> build/lib/pirlygenes/data 2026-04-09T16:50:42,832 copying pirlygenes/data/cancer-testis-antigens.csv -> build/lib/pirlygenes/data 2026-04-09T16:50:42,835 copying pirlygenes/data/cancer-type-genes.csv -> build/lib/pirlygenes/data 2026-04-09T16:50:42,838 copying pirlygenes/data/estimate-signatures.csv -> build/lib/pirlygenes/data 2026-04-09T16:50:42,841 copying pirlygenes/data/gene-sets.csv -> build/lib/pirlygenes/data 2026-04-09T16:50:42,843 copying pirlygenes/data/housekeeping-genes.csv -> build/lib/pirlygenes/data 2026-04-09T16:50:42,845 copying pirlygenes/data/multispecific-tcell-engager-trials.csv -> build/lib/pirlygenes/data 2026-04-09T16:50:42,848 copying pirlygenes/data/pan-cancer-expression.csv -> build/lib/pirlygenes/data 2026-04-09T16:50:43,115 copying pirlygenes/data/radioligand-targets.csv -> build/lib/pirlygenes/data 2026-04-09T16:50:43,117 copying pirlygenes/data/surface-proteins.csv -> build/lib/pirlygenes/data 2026-04-09T16:50:43,138 installing to build/bdist.linux-armv7l/wheel 2026-04-09T16:50:43,138 running install 2026-04-09T16:50:43,162 running install_lib 2026-04-09T16:50:43,170 creating build/bdist.linux-armv7l/wheel 2026-04-09T16:50:43,172 creating build/bdist.linux-armv7l/wheel/pirlygenes 2026-04-09T16:50:43,173 copying build/lib/pirlygenes/load_expression.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-09T16:50:43,175 copying build/lib/pirlygenes/aggregate_gene_expression.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-09T16:50:43,177 copying build/lib/pirlygenes/gene_ids.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-09T16:50:43,180 copying build/lib/pirlygenes/common.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-09T16:50:43,181 copying build/lib/pirlygenes/plot.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-09T16:50:43,186 copying build/lib/pirlygenes/PLAN-1.4.0-radioligand.md -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-09T16:50:43,188 copying build/lib/pirlygenes/tumor_purity.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-09T16:50:43,190 copying build/lib/pirlygenes/plot_data_helpers.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-09T16:50:43,193 copying build/lib/pirlygenes/__init__.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-09T16:50:43,194 copying build/lib/pirlygenes/load_dataset.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-09T16:50:43,197 creating build/bdist.linux-armv7l/wheel/pirlygenes/data 2026-04-09T16:50:43,198 copying build/lib/pirlygenes/data/estimate-signatures.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-09T16:50:43,200 copying build/lib/pirlygenes/data/cancer-driver-genes.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-09T16:50:43,203 copying build/lib/pirlygenes/data/multispecific-tcell-engager-trials.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-09T16:50:43,206 copying build/lib/pirlygenes/data/cancer-driver-variants.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-09T16:50:43,208 copying build/lib/pirlygenes/data/TCR-T-trials.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-09T16:50:43,211 copying build/lib/pirlygenes/data/surface-proteins.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-09T16:50:43,218 copying build/lib/pirlygenes/data/CAR-T-approved.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-09T16:50:43,220 copying build/lib/pirlygenes/data/TCR-T-approved.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-09T16:50:43,222 copying build/lib/pirlygenes/data/radioligand-targets.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-09T16:50:43,224 copying build/lib/pirlygenes/data/housekeeping-genes.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-09T16:50:43,226 copying build/lib/pirlygenes/data/gene-sets.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-09T16:50:43,228 copying build/lib/pirlygenes/data/pan-cancer-expression.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-09T16:50:43,389 copying build/lib/pirlygenes/data/ADC-trials.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-09T16:50:43,393 copying build/lib/pirlygenes/data/cancer-type-genes.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-09T16:50:43,395 copying build/lib/pirlygenes/data/cancer-testis-antigens.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-09T16:50:43,399 copying build/lib/pirlygenes/data/ADC-approved.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-09T16:50:43,401 copying build/lib/pirlygenes/data/cancer-surfaceome.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-09T16:50:43,403 copying build/lib/pirlygenes/data/ADC-withdrawn.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-09T16:50:43,405 copying build/lib/pirlygenes/data/bispecific-antibodies-approved.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-09T16:50:43,407 copying build/lib/pirlygenes/version.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-09T16:50:43,409 copying build/lib/pirlygenes/gene_names.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-09T16:50:43,411 copying build/lib/pirlygenes/gene_sets_cancer.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-09T16:50:43,414 copying build/lib/pirlygenes/transcript_to_gene.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-09T16:50:43,417 copying build/lib/pirlygenes/cli.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-09T16:50:43,419 running install_egg_info 2026-04-09T16:50:43,427 Copying pirlygenes.egg-info to build/bdist.linux-armv7l/wheel/./pirlygenes-3.14.0-py3.11.egg-info 2026-04-09T16:50:43,438 running install_scripts 2026-04-09T16:50:43,450 creating build/bdist.linux-armv7l/wheel/pirlygenes-3.14.0.dist-info/WHEEL 2026-04-09T16:50:43,453 creating '/tmp/pip-wheel-vayka_pf/.tmp-i98ml8gj/pirlygenes-3.14.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-04-09T16:50:43,456 adding 'pirlygenes/PLAN-1.4.0-radioligand.md' 2026-04-09T16:50:43,459 adding 'pirlygenes/__init__.py' 2026-04-09T16:50:43,461 adding 'pirlygenes/aggregate_gene_expression.py' 2026-04-09T16:50:43,465 adding 'pirlygenes/cli.py' 2026-04-09T16:50:43,467 adding 'pirlygenes/common.py' 2026-04-09T16:50:43,469 adding 'pirlygenes/gene_ids.py' 2026-04-09T16:50:43,471 adding 'pirlygenes/gene_names.py' 2026-04-09T16:50:43,475 adding 'pirlygenes/gene_sets_cancer.py' 2026-04-09T16:50:43,477 adding 'pirlygenes/load_dataset.py' 2026-04-09T16:50:43,480 adding 'pirlygenes/load_expression.py' 2026-04-09T16:50:43,493 adding 'pirlygenes/plot.py' 2026-04-09T16:50:43,496 adding 'pirlygenes/plot_data_helpers.py' 2026-04-09T16:50:43,498 adding 'pirlygenes/transcript_to_gene.py' 2026-04-09T16:50:43,502 adding 'pirlygenes/tumor_purity.py' 2026-04-09T16:50:43,504 adding 'pirlygenes/version.py' 2026-04-09T16:50:43,506 adding 'pirlygenes/data/ADC-approved.csv' 2026-04-09T16:50:43,511 adding 'pirlygenes/data/ADC-trials.csv' 2026-04-09T16:50:43,513 adding 'pirlygenes/data/ADC-withdrawn.csv' 2026-04-09T16:50:43,515 adding 'pirlygenes/data/CAR-T-approved.csv' 2026-04-09T16:50:43,516 adding 'pirlygenes/data/TCR-T-approved.csv' 2026-04-09T16:50:43,520 adding 'pirlygenes/data/TCR-T-trials.csv' 2026-04-09T16:50:43,522 adding 'pirlygenes/data/bispecific-antibodies-approved.csv' 2026-04-09T16:50:43,528 adding 'pirlygenes/data/cancer-driver-genes.csv' 2026-04-09T16:50:43,531 adding 'pirlygenes/data/cancer-driver-variants.csv' 2026-04-09T16:50:43,533 adding 'pirlygenes/data/cancer-surfaceome.csv' 2026-04-09T16:50:43,540 adding 'pirlygenes/data/cancer-testis-antigens.csv' 2026-04-09T16:50:43,543 adding 'pirlygenes/data/cancer-type-genes.csv' 2026-04-09T16:50:43,545 adding 'pirlygenes/data/estimate-signatures.csv' 2026-04-09T16:50:43,547 adding 'pirlygenes/data/gene-sets.csv' 2026-04-09T16:50:43,549 adding 'pirlygenes/data/housekeeping-genes.csv' 2026-04-09T16:50:43,551 adding 'pirlygenes/data/multispecific-tcell-engager-trials.csv' 2026-04-09T16:50:46,682 adding 'pirlygenes/data/pan-cancer-expression.csv' 2026-04-09T16:50:46,755 adding 'pirlygenes/data/radioligand-targets.csv' 2026-04-09T16:50:46,778 adding 'pirlygenes/data/surface-proteins.csv' 2026-04-09T16:50:46,784 adding 'pirlygenes-3.14.0.dist-info/licenses/LICENSE' 2026-04-09T16:50:46,787 adding 'pirlygenes-3.14.0.dist-info/METADATA' 2026-04-09T16:50:46,788 adding 'pirlygenes-3.14.0.dist-info/WHEEL' 2026-04-09T16:50:46,790 adding 'pirlygenes-3.14.0.dist-info/entry_points.txt' 2026-04-09T16:50:46,791 adding 'pirlygenes-3.14.0.dist-info/top_level.txt' 2026-04-09T16:50:46,793 adding 'pirlygenes-3.14.0.dist-info/RECORD' 2026-04-09T16:50:46,846 removing build/bdist.linux-armv7l/wheel 2026-04-09T16:50:46,966 Building wheel for pirlygenes (pyproject.toml): finished with status 'done' 2026-04-09T16:50:47,056 Created wheel for pirlygenes: filename=pirlygenes-3.14.0-py3-none-any.whl size=4231229 sha256=0c1c54241e14cf3132c8654a0d4ae56128ef5bbe252dba4063f95ecbeb5656a4 2026-04-09T16:50:47,057 Stored in directory: /tmp/pip-ephem-wheel-cache-n8o6hmpt/wheels/4e/3e/96/6fef4cd72cd5d201bef91e71332422bb07ca39b7af84b79c19 2026-04-09T16:50:47,073 Successfully built pirlygenes 2026-04-09T16:50:47,220 Removed build tracker: '/tmp/pip-build-tracker-agx5zmw2'