2026-04-09T18:45:52,709 Created temporary directory: /tmp/pip-ephem-wheel-cache-_46rfnwo 2026-04-09T18:45:52,711 Created temporary directory: /tmp/pip-build-tracker-js0huiuo 2026-04-09T18:45:52,712 Initialized build tracking at /tmp/pip-build-tracker-js0huiuo 2026-04-09T18:45:52,712 Created build tracker: /tmp/pip-build-tracker-js0huiuo 2026-04-09T18:45:52,712 Entered build tracker: /tmp/pip-build-tracker-js0huiuo 2026-04-09T18:45:52,713 Created temporary directory: /tmp/pip-wheel-0flndh_6 2026-04-09T18:45:52,716 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-09T18:45:52,719 Created temporary directory: /tmp/pip-ephem-wheel-cache-1jbttqyz 2026-04-09T18:45:52,741 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-09T18:45:52,745 2 location(s) to search for versions of topiary: 2026-04-09T18:45:52,745 * https://pypi.org/simple/topiary/ 2026-04-09T18:45:52,745 * https://www.piwheels.org/simple/topiary/ 2026-04-09T18:45:52,745 Fetching project page and analyzing links: https://pypi.org/simple/topiary/ 2026-04-09T18:45:52,746 Getting page https://pypi.org/simple/topiary/ 2026-04-09T18:45:52,748 Found index url https://pypi.org/simple 2026-04-09T18:45:52,981 Fetched page https://pypi.org/simple/topiary/ as application/vnd.pypi.simple.v1+json 2026-04-09T18:45:52,992 Found link https://files.pythonhosted.org/packages/38/f6/60c60d77093e492c9a139a87514fa230296ca94080fec6d479f22bf5cfcd/topiary-0.0.0.tar.gz (from https://pypi.org/simple/topiary/), version: 0.0.0 2026-04-09T18:45:52,993 Found link https://files.pythonhosted.org/packages/40/7f/4c423389757bae0b47f7640d8b66bf9d5f5bbf6e387faa2dfa34fa0b809e/topiary-0.0.1.tar.gz (from https://pypi.org/simple/topiary/), version: 0.0.1 2026-04-09T18:45:52,993 Found link https://files.pythonhosted.org/packages/29/a2/eb5e9dec8dafc167f24cd4234a8d75b815411ea8b6af4724e8218038d52e/topiary-0.0.2.tar.gz (from https://pypi.org/simple/topiary/), version: 0.0.2 2026-04-09T18:45:52,994 Found link https://files.pythonhosted.org/packages/42/e4/e8450b31eac4229cfbe29bc87b8594ac1b03bc06f3272996cb3d50038c15/topiary-0.0.3.tar.gz (from https://pypi.org/simple/topiary/), version: 0.0.3 2026-04-09T18:45:52,995 Found link https://files.pythonhosted.org/packages/bc/ea/f0de38c2ba7970d28fe8404cd7bd32b2d041e7d3dc2027d7efff390e213c/topiary-0.0.4.tar.gz (from https://pypi.org/simple/topiary/), version: 0.0.4 2026-04-09T18:45:52,996 Found link 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https://files.pythonhosted.org/packages/0e/4a/fbc62d6da7aeb1fa64fabd8d7f0836f5a079b0a098d9b2812b3158070672/topiary-0.0.19.tar.gz (from https://pypi.org/simple/topiary/), version: 0.0.19 2026-04-09T18:45:53,005 Found link https://files.pythonhosted.org/packages/8a/f7/6b7e6863daa1cb5125420e68e85c4da83490b0700a0cd743ff0505f49df0/topiary-0.0.20.tar.gz (from https://pypi.org/simple/topiary/), version: 0.0.20 2026-04-09T18:45:53,005 Found link https://files.pythonhosted.org/packages/0c/18/4fce39e2b363296333b7833c4624ad0fdfc799aab2771af18d5b13006be0/topiary-0.0.21.tar.gz (from https://pypi.org/simple/topiary/), version: 0.0.21 2026-04-09T18:45:53,006 Found link https://files.pythonhosted.org/packages/4f/8d/cfcda3d246e6a9dfd10fcda4de1b3cba171ffcf0508d3b8807f02765af1b/topiary-0.1.0.tar.gz (from https://pypi.org/simple/topiary/), version: 0.1.0 2026-04-09T18:45:53,007 Found link https://files.pythonhosted.org/packages/f4/24/61c55b78e2597bbec4941edcf4161328f725f96836e20dd3b55e4d9d5fc3/topiary-0.1.1-0.tar.gz (from https://pypi.org/simple/topiary/), version: 0.1.1-0 2026-04-09T18:45:53,007 Found link https://files.pythonhosted.org/packages/c4/6e/c3e2335ab2b5be7be8772ddd20bb158915ce5fdd0b11f8d55dea779638de/topiary-0.1.2.tar.gz (from https://pypi.org/simple/topiary/), version: 0.1.2 2026-04-09T18:45:53,008 Found link https://files.pythonhosted.org/packages/d3/fe/3b790a8e6401f8d7cfb50de1a4005e237f6c91ffa541c41524520c71e881/topiary-1.2.0.tar.gz (from https://pypi.org/simple/topiary/), version: 1.2.0 2026-04-09T18:45:53,009 Found link https://files.pythonhosted.org/packages/66/cd/6713c0c5cb9b5902943586a918f000ad4521e5d24a4ff32ee99b1d211167/topiary-1.2.1.tar.gz (from https://pypi.org/simple/topiary/), version: 1.2.1 2026-04-09T18:45:53,010 Found link https://files.pythonhosted.org/packages/52/f0/5083f0d77ce33732322b146ed0088bee776750a07d1ef52b65a5c4f3fe21/topiary-2.0.0.tar.gz (from https://pypi.org/simple/topiary/), version: 2.0.0 2026-04-09T18:45:53,010 Found link https://files.pythonhosted.org/packages/e2/13/7f3c8607ff3671a0d9f1f4eb58cb7f602ce540138329dee9a3bd581c84ea/topiary-2.1.0.tar.gz (from https://pypi.org/simple/topiary/), version: 2.1.0 2026-04-09T18:45:53,011 Found link https://files.pythonhosted.org/packages/3e/c7/ce747df518eafaab429e57814d08d6416c5d59fc06e8643b8a472ef0c1d2/topiary-2.2.0.tar.gz (from https://pypi.org/simple/topiary/), version: 2.2.0 2026-04-09T18:45:53,012 Found link https://files.pythonhosted.org/packages/8a/d1/5ff5c84ea223c671f94c9f7df80481663f3bd0755bdbdd597e83fe52ca81/topiary-3.0.0.tar.gz (from https://pypi.org/simple/topiary/), version: 3.0.0 2026-04-09T18:45:53,012 Found link https://files.pythonhosted.org/packages/f0/e5/e560a7ec932717d57aa88285331314549bfb43565b014416db30f826ce61/topiary-3.0.2.tar.gz (from https://pypi.org/simple/topiary/), version: 3.0.2 2026-04-09T18:45:53,013 Found link https://files.pythonhosted.org/packages/b2/0b/b44009ee261861f74d13b506f7d69a1c44f2df1990d046f7a852a5fe6540/topiary-3.0.6.tar.gz (from https://pypi.org/simple/topiary/), version: 3.0.6 2026-04-09T18:45:53,014 Skipping link: No binaries permitted for topiary: https://files.pythonhosted.org/packages/92/7e/4f1c24c87e1139b70f771b5b8248f28879e904b54c6b7bbf09ba52b3b019/topiary-4.0.0-py3-none-any.whl (from https://pypi.org/simple/topiary/) (requires-python:>=3.9) 2026-04-09T18:45:53,015 Found link https://files.pythonhosted.org/packages/ac/7a/aeb62683f7f6927facf941ff7afec97b8e4870a2ffd50769d17da45d2d39/topiary-4.0.0.tar.gz (from https://pypi.org/simple/topiary/) (requires-python:>=3.9), version: 4.0.0 2026-04-09T18:45:53,016 Skipping link: No binaries permitted for topiary: https://files.pythonhosted.org/packages/5d/42/858c5ac8bdb667c2175917adcdf342bbd83a0a5dff92c78b9bc4250b678f/topiary-4.0.1-py3-none-any.whl (from https://pypi.org/simple/topiary/) (requires-python:>=3.9) 2026-04-09T18:45:53,017 Found link https://files.pythonhosted.org/packages/14/09/67a3423dc279acfc48e7597c866f55b375a3b927257eed1d5e6a89d5743a/topiary-4.0.1.tar.gz (from https://pypi.org/simple/topiary/) (requires-python:>=3.9), version: 4.0.1 2026-04-09T18:45:53,017 Skipping link: No binaries permitted for topiary: https://files.pythonhosted.org/packages/df/cd/7ec888a9a462fd4e98bd23f28d44abccc196e8db31a8ca52275092c6b1cd/topiary-4.1.0-py3-none-any.whl (from https://pypi.org/simple/topiary/) (requires-python:>=3.9) 2026-04-09T18:45:53,018 Found link https://files.pythonhosted.org/packages/cf/87/435da8d2f668d1e6ef06cbe0d7b5be5bc5b7dddeea194da661bd177c8464/topiary-4.1.0.tar.gz (from https://pypi.org/simple/topiary/) (requires-python:>=3.9), version: 4.1.0 2026-04-09T18:45:53,019 Skipping link: No binaries permitted for topiary: https://files.pythonhosted.org/packages/ac/34/3b0e9e182a15143f915de95583f5f9ae4a0af31973dcb5cf5c5dce04665f/topiary-4.2.0-py3-none-any.whl (from https://pypi.org/simple/topiary/) (requires-python:>=3.9) 2026-04-09T18:45:53,019 Found link https://files.pythonhosted.org/packages/d0/da/88cb66c3e8c3e2511a1fbf3c987e27882e46f234ba44c19600b7c828787c/topiary-4.2.0.tar.gz (from https://pypi.org/simple/topiary/) (requires-python:>=3.9), version: 4.2.0 2026-04-09T18:45:53,020 Skipping link: No binaries permitted for topiary: https://files.pythonhosted.org/packages/ef/2a/9ed13bfcb0a373e03cf4e72ba2bfa9b40c4901dfb40317ba3f31df471dd7/topiary-4.2.1-py3-none-any.whl (from https://pypi.org/simple/topiary/) (requires-python:>=3.9) 2026-04-09T18:45:53,021 Found link https://files.pythonhosted.org/packages/12/07/506911d38ca3c79569b36a1df628d6c5ae1d6f3717b7d66725325cd44c61/topiary-4.2.1.tar.gz (from https://pypi.org/simple/topiary/) (requires-python:>=3.9), version: 4.2.1 2026-04-09T18:45:53,022 Skipping link: No binaries permitted for topiary: https://files.pythonhosted.org/packages/59/2e/cb900a5b91dc5ca7b73c4a7db7e4a52e8305a1b7cb907d01846d6d4dbec4/topiary-4.3.0-py3-none-any.whl (from https://pypi.org/simple/topiary/) (requires-python:>=3.9) 2026-04-09T18:45:53,023 Found link https://files.pythonhosted.org/packages/52/f5/5562c03f4048966e2bd27264ca60ad2d438b350a6092016d58fe8af0607f/topiary-4.3.0.tar.gz (from https://pypi.org/simple/topiary/) (requires-python:>=3.9), version: 4.3.0 2026-04-09T18:45:53,024 Skipping link: No binaries permitted for topiary: https://files.pythonhosted.org/packages/00/b0/7532d1d0d6f03d2c26e7e02f059ea9c3c2d04e1f464d5fa21a76768e4835/topiary-4.3.1-py3-none-any.whl (from https://pypi.org/simple/topiary/) (requires-python:>=3.9) 2026-04-09T18:45:53,025 Found link https://files.pythonhosted.org/packages/dc/da/1df0b540aeb1db5aac978549b92a93ca0a5b6d6d9a63bee47df284d24d98/topiary-4.3.1.tar.gz (from 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https://files.pythonhosted.org/packages/6d/d6/59b4157e9b3d446648b7625954b484a190ebd9303c8213186ef0f8cf652f/topiary-4.4.0.tar.gz (from https://pypi.org/simple/topiary/) (requires-python:>=3.9), version: 4.4.0 2026-04-09T18:45:53,029 Skipping link: No binaries permitted for topiary: https://files.pythonhosted.org/packages/f8/ea/226fefac235e8b1b21b9171970bcdd05976161d2a65b4b6a1574c3a8b92c/topiary-4.5.0-py3-none-any.whl (from https://pypi.org/simple/topiary/) (requires-python:>=3.9) 2026-04-09T18:45:53,029 Found link https://files.pythonhosted.org/packages/56/9b/5ee22541bdae815cb3805958f6588e6f7ff69b2a2476545e91f395358003/topiary-4.5.0.tar.gz (from https://pypi.org/simple/topiary/) (requires-python:>=3.9), version: 4.5.0 2026-04-09T18:45:53,030 Skipping link: No binaries permitted for topiary: https://files.pythonhosted.org/packages/e9/9a/b1af5d6951d50d3e263e4ae4be4ce80d814e35cd087946c8fd51c639390b/topiary-4.5.1-py3-none-any.whl (from https://pypi.org/simple/topiary/) (requires-python:>=3.9) 2026-04-09T18:45:53,031 Found link https://files.pythonhosted.org/packages/bf/7c/c7b209b304deef6f6214b60cbeae423078ebbb34cc2d7fc16afb5bf74d98/topiary-4.5.1.tar.gz (from https://pypi.org/simple/topiary/) (requires-python:>=3.9), version: 4.5.1 2026-04-09T18:45:53,032 Fetching project page and analyzing links: https://www.piwheels.org/simple/topiary/ 2026-04-09T18:45:53,032 Getting page https://www.piwheels.org/simple/topiary/ 2026-04-09T18:45:53,034 Found index url https://www.piwheels.org/simple 2026-04-09T18:45:53,211 Fetched page https://www.piwheels.org/simple/topiary/ as text/html 2026-04-09T18:45:53,222 Skipping link: No binaries permitted for topiary: https://www.piwheels.org/simple/topiary/topiary-4.5.0-py3-none-any.whl#sha256=dc54958dc3af7a04e37dcc4b4bb0caacec6f5906cfb175fbe56dc54c5d5a8215 (from https://www.piwheels.org/simple/topiary/) (requires-python:>=3.9) 2026-04-09T18:45:53,223 Skipping link: No binaries permitted for topiary: 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https://www.piwheels.org/simple/topiary/topiary-4.3.0-py3-none-any.whl#sha256=36a38ca018eadf11784ce6de0fede9ede99238e15c145a7e6785ab08cee1488a (from https://www.piwheels.org/simple/topiary/) (requires-python:>=3.9) 2026-04-09T18:45:53,225 Skipping link: No binaries permitted for topiary: https://www.piwheels.org/simple/topiary/topiary-4.2.1-py3-none-any.whl#sha256=ca4a97c3d2073b0e9cc9b0e70172d614bc644736883bebcc7209289cd8198be1 (from https://www.piwheels.org/simple/topiary/) (requires-python:>=3.9) 2026-04-09T18:45:53,226 Skipping link: No binaries permitted for topiary: https://www.piwheels.org/simple/topiary/topiary-4.2.0-py3-none-any.whl#sha256=c9fa1c6d95275d1aa4940f5395fca12e0217e8de0a982e6de07777b6d9882868 (from https://www.piwheels.org/simple/topiary/) (requires-python:>=3.9) 2026-04-09T18:45:53,227 Skipping link: No binaries permitted for topiary: https://www.piwheels.org/simple/topiary/topiary-4.1.0-py3-none-any.whl#sha256=12d648d2024cd779738a89a84c36ad78fd6dc24771fde74c865b174d4cf9f3f0 (from https://www.piwheels.org/simple/topiary/) (requires-python:>=3.9) 2026-04-09T18:45:53,228 Skipping link: No binaries permitted for topiary: https://www.piwheels.org/simple/topiary/topiary-4.0.1-py3-none-any.whl#sha256=9de960662eeb8ff6dd66c2b9ad248b8aab89bfb38a1686b46455203ddab35029 (from https://www.piwheels.org/simple/topiary/) (requires-python:>=3.9) 2026-04-09T18:45:53,228 Skipping link: No binaries permitted for topiary: https://www.piwheels.org/simple/topiary/topiary-4.0.0-py3-none-any.whl#sha256=56965eea765f6d31c879ce179bee7f0f3efad79829b782938aa6571f012a774f (from https://www.piwheels.org/simple/topiary/) (requires-python:>=3.9) 2026-04-09T18:45:53,229 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-3.0.6-py3-none-any.whl#sha256=bbfaba8444095e39ed9ed8d14e7460f26f7c5d785e452bd44bcb533ef77fc8e4 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T18:45:53,229 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-3.0.2-py3-none-any.whl#sha256=8a9776d2965569019b41fbae3578df6ac218b66915ac8b5e209b73b7df1e4ac0 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T18:45:53,230 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-3.0.0-py3-none-any.whl#sha256=687e9928c772d363c854ecaf8e073eba63cbdaf8b974690d8f83f522fcd7723f (from https://www.piwheels.org/simple/topiary/) 2026-04-09T18:45:53,230 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-2.2.0-py3-none-any.whl#sha256=afb7b09b18f345de86420e8f1d61284c526a3bdcb0e352639c7383105203b2f9 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T18:45:53,231 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-2.1.0-py3-none-any.whl#sha256=6a54b133dc04b282ecb6254205dd09896a559c40a793a5470a1e8d77ed2244b1 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T18:45:53,231 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-2.0.0-py3-none-any.whl#sha256=bf376c02311efd5c80a0793be89ae4a34d82ab5397b5861dd664ce96d3e48a38 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T18:45:53,232 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-1.2.1-py3-none-any.whl#sha256=bc761dde043d0b6aa59153fc4cef4c3f4173d9cc2af622fc8263962c2fc21f0d (from https://www.piwheels.org/simple/topiary/) 2026-04-09T18:45:53,233 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-1.2.0-py3-none-any.whl#sha256=311e8283cb60ad0d52bad801d50774f6634e70f8998da593fb6bd3b2bc6ffa65 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T18:45:53,233 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.1.2-py3-none-any.whl#sha256=e7a1c96210356871a2273cd29f1899190e3ed5683d4a4572088cd945d1f5e758 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T18:45:53,234 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.1.0-py3-none-any.whl#sha256=46f5f6e4d2071e7711aa10d069defad14ffdf877b255780830a6cf6e42b61d5f (from https://www.piwheels.org/simple/topiary/) 2026-04-09T18:45:53,235 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.21-py3-none-any.whl#sha256=3983f7c3fbcff8c1a577833c364c6e99c1d98ac9955c3696439f59d8faa8eeda (from https://www.piwheels.org/simple/topiary/) 2026-04-09T18:45:53,235 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.20-py3-none-any.whl#sha256=3fb43551e5d6896e3e54f5a33a29922523c71c15b3849801206d04a8c4805350 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T18:45:53,236 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.19-py3-none-any.whl#sha256=0bdd9a0f991558f802326026fec79812c40392013a16fa27d697a9c37d0cf12c (from https://www.piwheels.org/simple/topiary/) 2026-04-09T18:45:53,236 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.18-py3-none-any.whl#sha256=9e812f2912a401afd7be2c4905413e0c158d97a57ddd49a478edb0b8d9805a28 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T18:45:53,237 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.17-py3-none-any.whl#sha256=9caa65a5a200720510e1c38a256ba0ee4702a443d0c0f9e56724aaa16b907517 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T18:45:53,237 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.16-py3-none-any.whl#sha256=1cce9bca3cbb426edd71bbf7bbd1c069b0498c46d67ce549315317b0f75ab1d6 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T18:45:53,238 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.15-py3-none-any.whl#sha256=ca5ae7481368a4fb5d839d1ac3cab6823cbebeb2733ef0e9c6b2275854eb895f (from https://www.piwheels.org/simple/topiary/) 2026-04-09T18:45:53,238 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.14-py3-none-any.whl#sha256=48e8744f89c7f03717c8e36a17ede28b495b845c7106cb5638c216db27054fad (from https://www.piwheels.org/simple/topiary/) 2026-04-09T18:45:53,239 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.13-py3-none-any.whl#sha256=588396661f87bea8be890d90c6800ac4825d06ae7db1c50c98a1978fe9c45bd3 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T18:45:53,239 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.10-py3-none-any.whl#sha256=56bea0cecf1273a44cd2e51ad294714c41e0fb7d9cc0b16382709573c4ec9443 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T18:45:53,240 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.9-py3-none-any.whl#sha256=da4dc4334fdf5cb89b68356e11737c8dab86fd100b9c7979e95eac3dc58fbd6d (from https://www.piwheels.org/simple/topiary/) 2026-04-09T18:45:53,241 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.8-py3-none-any.whl#sha256=12b4f283d8fbedbd316649be8833a17fee852097f1e5cd8963264e6c4a2721e0 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T18:45:53,241 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.7-py3-none-any.whl#sha256=6e23dbd38e19c12b658a8373b501f1e929c6fd3420749dee506a82b60b190d42 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T18:45:53,242 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.6-py3-none-any.whl#sha256=f3b597a0744c3a7540c3ffe571b8f4fad3d2ad40ddc6198952e2aee7c96ff82c (from https://www.piwheels.org/simple/topiary/) 2026-04-09T18:45:53,242 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.5-py3-none-any.whl#sha256=52f489eb5876b619e9988ee4c2fabec4df1a087c2f67f96cbb99ece92eb57576 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T18:45:53,243 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.4-py3-none-any.whl#sha256=5c94fb56e54399233efc5f88a6f6cfe2914773c5b2aa67a24f6ddf6089561b3b (from https://www.piwheels.org/simple/topiary/) 2026-04-09T18:45:53,244 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.3-py3-none-any.whl#sha256=197f9da38cd367d77acaec6282f0d22aefaf1e1ab6754379f671902958348f15 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T18:45:53,244 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.2-py3-none-any.whl#sha256=accaff90bafe6c929aece0f65b8ccedd45839064bf361d8f69bfefd543127ec2 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T18:45:53,245 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.1-py3-none-any.whl#sha256=6743a02aee34bc7567913bbe5c15a321924d9e1cb2c15f956e4ebb9b321707f4 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T18:45:53,245 Skipping link: No binaries permitted for topiary: https://archive1.piwheels.org/simple/topiary/topiary-0.0.0-py3-none-any.whl#sha256=a4de4e13dc8561c43fd350094d3cbc3267e0faacf5e65b94501ef15affdf51e6 (from https://www.piwheels.org/simple/topiary/) 2026-04-09T18:45:53,246 Skipping link: not a file: https://www.piwheels.org/simple/topiary/ 2026-04-09T18:45:53,246 Skipping link: not a file: https://pypi.org/simple/topiary/ 2026-04-09T18:45:53,272 Given no hashes to check 1 links for project 'topiary': discarding no candidates 2026-04-09T18:45:53,292 Collecting topiary==4.5.1 2026-04-09T18:45:53,294 Created temporary directory: /tmp/pip-unpack-893kojb9 2026-04-09T18:45:53,521 Downloading topiary-4.5.1.tar.gz (76 kB) 2026-04-09T18:45:53,712 Added topiary==4.5.1 from https://files.pythonhosted.org/packages/bf/7c/c7b209b304deef6f6214b60cbeae423078ebbb34cc2d7fc16afb5bf74d98/topiary-4.5.1.tar.gz to build tracker '/tmp/pip-build-tracker-js0huiuo' 2026-04-09T18:45:53,717 Created temporary directory: /tmp/pip-build-env-0o10tvnr 2026-04-09T18:45:53,722 Installing build dependencies: started 2026-04-09T18:45:53,723 Running command pip subprocess to install build dependencies 2026-04-09T18:45:54,868 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-04-09T18:45:55,307 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-09T18:45:55,330 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-09T18:45:57,108 Collecting setuptools>=64 2026-04-09T18:45:57,190 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-04-09T18:46:00,154 Installing collected packages: setuptools 2026-04-09T18:46:03,231 Successfully installed setuptools-82.0.1 2026-04-09T18:46:03,500 Installing build dependencies: finished with status 'done' 2026-04-09T18:46:03,509 Getting requirements to build wheel: started 2026-04-09T18:46:03,511 Running command Getting requirements to build wheel 2026-04-09T18:46:04,228 /tmp/pip-build-env-0o10tvnr/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-09T18:46:04,228 !! 2026-04-09T18:46:04,229 ******************************************************************************** 2026-04-09T18:46:04,230 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-09T18:46:04,231 License :: OSI Approved :: Apache Software License 2026-04-09T18:46:04,232 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-09T18:46:04,232 ******************************************************************************** 2026-04-09T18:46:04,234 !! 2026-04-09T18:46:04,234 dist._finalize_license_expression() 2026-04-09T18:46:04,235 /tmp/pip-build-env-0o10tvnr/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-09T18:46:04,235 !! 2026-04-09T18:46:04,236 ******************************************************************************** 2026-04-09T18:46:04,236 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-09T18:46:04,237 License :: OSI Approved :: Apache Software License 2026-04-09T18:46:04,238 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-09T18:46:04,239 ******************************************************************************** 2026-04-09T18:46:04,240 !! 2026-04-09T18:46:04,240 self._finalize_license_expression() 2026-04-09T18:46:04,241 running egg_info 2026-04-09T18:46:04,247 writing topiary.egg-info/PKG-INFO 2026-04-09T18:46:04,251 writing dependency_links to topiary.egg-info/dependency_links.txt 2026-04-09T18:46:04,253 writing entry points to topiary.egg-info/entry_points.txt 2026-04-09T18:46:04,255 writing requirements to topiary.egg-info/requires.txt 2026-04-09T18:46:04,256 writing top-level names to topiary.egg-info/top_level.txt 2026-04-09T18:46:04,281 reading manifest file 'topiary.egg-info/SOURCES.txt' 2026-04-09T18:46:04,286 adding license file 'LICENSE' 2026-04-09T18:46:04,291 writing manifest file 'topiary.egg-info/SOURCES.txt' 2026-04-09T18:46:04,389 Getting requirements to build wheel: finished with status 'done' 2026-04-09T18:46:04,392 Created temporary directory: /tmp/pip-modern-metadata-hvd4xv0h 2026-04-09T18:46:04,395 Preparing metadata (pyproject.toml): started 2026-04-09T18:46:04,396 Running command Preparing metadata (pyproject.toml) 2026-04-09T18:46:05,046 /tmp/pip-build-env-0o10tvnr/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-09T18:46:05,046 !! 2026-04-09T18:46:05,047 ******************************************************************************** 2026-04-09T18:46:05,048 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-09T18:46:05,049 License :: OSI Approved :: Apache Software License 2026-04-09T18:46:05,050 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-09T18:46:05,051 ******************************************************************************** 2026-04-09T18:46:05,052 !! 2026-04-09T18:46:05,053 dist._finalize_license_expression() 2026-04-09T18:46:05,053 /tmp/pip-build-env-0o10tvnr/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-09T18:46:05,054 !! 2026-04-09T18:46:05,055 ******************************************************************************** 2026-04-09T18:46:05,056 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-09T18:46:05,057 License :: OSI Approved :: Apache Software License 2026-04-09T18:46:05,058 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-09T18:46:05,059 ******************************************************************************** 2026-04-09T18:46:05,060 !! 2026-04-09T18:46:05,061 self._finalize_license_expression() 2026-04-09T18:46:05,062 running dist_info 2026-04-09T18:46:05,070 creating /tmp/pip-modern-metadata-hvd4xv0h/topiary.egg-info 2026-04-09T18:46:05,071 writing /tmp/pip-modern-metadata-hvd4xv0h/topiary.egg-info/PKG-INFO 2026-04-09T18:46:05,076 writing dependency_links to /tmp/pip-modern-metadata-hvd4xv0h/topiary.egg-info/dependency_links.txt 2026-04-09T18:46:05,077 writing entry points to /tmp/pip-modern-metadata-hvd4xv0h/topiary.egg-info/entry_points.txt 2026-04-09T18:46:05,079 writing requirements to /tmp/pip-modern-metadata-hvd4xv0h/topiary.egg-info/requires.txt 2026-04-09T18:46:05,081 writing top-level names to /tmp/pip-modern-metadata-hvd4xv0h/topiary.egg-info/top_level.txt 2026-04-09T18:46:05,082 writing manifest file '/tmp/pip-modern-metadata-hvd4xv0h/topiary.egg-info/SOURCES.txt' 2026-04-09T18:46:05,104 reading manifest file '/tmp/pip-modern-metadata-hvd4xv0h/topiary.egg-info/SOURCES.txt' 2026-04-09T18:46:05,106 adding license file 'LICENSE' 2026-04-09T18:46:05,110 writing manifest file '/tmp/pip-modern-metadata-hvd4xv0h/topiary.egg-info/SOURCES.txt' 2026-04-09T18:46:05,111 creating '/tmp/pip-modern-metadata-hvd4xv0h/topiary-4.5.1.dist-info' 2026-04-09T18:46:05,238 Preparing metadata (pyproject.toml): finished with status 'done' 2026-04-09T18:46:05,243 Source in /tmp/pip-wheel-0flndh_6/topiary_d1f4e8dea707406297282fce1b416de7 has version 4.5.1, which satisfies requirement topiary==4.5.1 from https://files.pythonhosted.org/packages/bf/7c/c7b209b304deef6f6214b60cbeae423078ebbb34cc2d7fc16afb5bf74d98/topiary-4.5.1.tar.gz 2026-04-09T18:46:05,244 Removed topiary==4.5.1 from https://files.pythonhosted.org/packages/bf/7c/c7b209b304deef6f6214b60cbeae423078ebbb34cc2d7fc16afb5bf74d98/topiary-4.5.1.tar.gz from build tracker '/tmp/pip-build-tracker-js0huiuo' 2026-04-09T18:46:05,251 Created temporary directory: /tmp/pip-unpack-zeeul1g1 2026-04-09T18:46:05,252 Building wheels for collected packages: topiary 2026-04-09T18:46:05,256 Created temporary directory: /tmp/pip-wheel-l2hiabqd 2026-04-09T18:46:05,257 Destination directory: /tmp/pip-wheel-l2hiabqd 2026-04-09T18:46:05,259 Building wheel for topiary (pyproject.toml): started 2026-04-09T18:46:05,260 Running command Building wheel for topiary (pyproject.toml) 2026-04-09T18:46:05,878 /tmp/pip-build-env-0o10tvnr/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-09T18:46:05,879 !! 2026-04-09T18:46:05,880 ******************************************************************************** 2026-04-09T18:46:05,881 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-09T18:46:05,882 License :: OSI Approved :: Apache Software License 2026-04-09T18:46:05,883 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-09T18:46:05,883 ******************************************************************************** 2026-04-09T18:46:05,885 !! 2026-04-09T18:46:05,885 dist._finalize_license_expression() 2026-04-09T18:46:05,886 /tmp/pip-build-env-0o10tvnr/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-09T18:46:05,886 !! 2026-04-09T18:46:05,888 ******************************************************************************** 2026-04-09T18:46:05,888 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-09T18:46:05,889 License :: OSI Approved :: Apache Software License 2026-04-09T18:46:05,890 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-09T18:46:05,891 ******************************************************************************** 2026-04-09T18:46:05,892 !! 2026-04-09T18:46:05,893 self._finalize_license_expression() 2026-04-09T18:46:05,893 running bdist_wheel 2026-04-09T18:46:05,904 running build 2026-04-09T18:46:05,904 running build_py 2026-04-09T18:46:05,910 creating build/lib/topiary 2026-04-09T18:46:05,912 copying topiary/inputs.py -> build/lib/topiary 2026-04-09T18:46:05,915 copying topiary/sequence_helpers.py -> build/lib/topiary 2026-04-09T18:46:05,917 copying topiary/ranking.py -> build/lib/topiary 2026-04-09T18:46:05,920 copying topiary/__init__.py -> build/lib/topiary 2026-04-09T18:46:05,922 copying topiary/sources.py -> build/lib/topiary 2026-04-09T18:46:05,924 copying topiary/filters.py -> build/lib/topiary 2026-04-09T18:46:05,926 copying topiary/properties.py -> build/lib/topiary 2026-04-09T18:46:05,928 copying topiary/predictor.py -> build/lib/topiary 2026-04-09T18:46:05,932 creating build/lib/tests 2026-04-09T18:46:05,933 copying tests/test_dsl_extensions.py -> build/lib/tests 2026-04-09T18:46:05,936 copying tests/test_dataframe.py -> build/lib/tests 2026-04-09T18:46:05,937 copying tests/test_sources.py -> build/lib/tests 2026-04-09T18:46:05,939 copying tests/test_sources_optional.py -> build/lib/tests 2026-04-09T18:46:05,941 copying tests/test_padding.py -> build/lib/tests 2026-04-09T18:46:05,943 copying tests/test_integration.py -> build/lib/tests 2026-04-09T18:46:05,944 copying tests/test_mutant_epitope_predictions_class2.py -> build/lib/tests 2026-04-09T18:46:05,946 copying tests/test_coverage_gaps.py -> build/lib/tests 2026-04-09T18:46:05,948 copying tests/test_args_outputs.py -> build/lib/tests 2026-04-09T18:46:05,950 copying tests/test_cli_protein_changes.py -> build/lib/tests 2026-04-09T18:46:05,952 copying tests/test_direct_input_regressions.py -> build/lib/tests 2026-04-09T18:46:05,953 copying tests/test_end_to_end.py -> build/lib/tests 2026-04-09T18:46:05,955 copying tests/common.py -> build/lib/tests 2026-04-09T18:46:05,957 copying tests/__init__.py -> build/lib/tests 2026-04-09T18:46:05,958 copying tests/test_mutant_epitope_predictions_class1.py -> build/lib/tests 2026-04-09T18:46:05,960 copying tests/test_load_stringtie_gtf_fpkm.py -> build/lib/tests 2026-04-09T18:46:05,962 copying tests/test_rna_helpers.py -> build/lib/tests 2026-04-09T18:46:05,963 copying tests/data.py -> build/lib/tests 2026-04-09T18:46:05,965 copying tests/test_variant_expression_filters.py -> build/lib/tests 2026-04-09T18:46:05,967 copying tests/test_epitopes_from_commandline_args.py -> build/lib/tests 2026-04-09T18:46:05,969 copying tests/test_effect_expression_filters.py -> build/lib/tests 2026-04-09T18:46:05,971 copying tests/test_inputs.py -> build/lib/tests 2026-04-09T18:46:05,973 copying tests/test_ranking.py -> build/lib/tests 2026-04-09T18:46:05,976 copying tests/test_contains_mutant_residues.py -> build/lib/tests 2026-04-09T18:46:05,978 copying tests/test_peptide_mutation_interval.py -> build/lib/tests 2026-04-09T18:46:05,979 copying tests/test_load_cufflinks_fpkm.py -> build/lib/tests 2026-04-09T18:46:05,981 copying tests/test_validation_and_edge_cases.py -> build/lib/tests 2026-04-09T18:46:05,984 creating build/lib/topiary/cli 2026-04-09T18:46:05,985 copying topiary/cli/filtering.py -> build/lib/topiary/cli 2026-04-09T18:46:05,987 copying topiary/cli/sequence.py -> build/lib/topiary/cli 2026-04-09T18:46:05,989 copying topiary/cli/outputs.py -> build/lib/topiary/cli 2026-04-09T18:46:05,991 copying topiary/cli/script.py -> build/lib/topiary/cli 2026-04-09T18:46:05,992 copying topiary/cli/__init__.py -> build/lib/topiary/cli 2026-04-09T18:46:05,994 copying topiary/cli/errors.py -> build/lib/topiary/cli 2026-04-09T18:46:05,996 copying topiary/cli/rna.py -> build/lib/topiary/cli 2026-04-09T18:46:05,998 copying topiary/cli/args.py -> build/lib/topiary/cli 2026-04-09T18:46:06,001 copying topiary/cli/protein_changes.py -> build/lib/topiary/cli 2026-04-09T18:46:06,004 creating build/lib/topiary/rna 2026-04-09T18:46:06,005 copying topiary/rna/cufflinks.py -> build/lib/topiary/rna 2026-04-09T18:46:06,007 copying topiary/rna/common.py -> build/lib/topiary/rna 2026-04-09T18:46:06,009 copying topiary/rna/__init__.py -> build/lib/topiary/rna 2026-04-09T18:46:06,011 copying topiary/rna/gtf.py -> build/lib/topiary/rna 2026-04-09T18:46:06,013 running egg_info 2026-04-09T18:46:06,022 writing topiary.egg-info/PKG-INFO 2026-04-09T18:46:06,026 writing dependency_links to topiary.egg-info/dependency_links.txt 2026-04-09T18:46:06,028 writing entry points to topiary.egg-info/entry_points.txt 2026-04-09T18:46:06,030 writing requirements to topiary.egg-info/requires.txt 2026-04-09T18:46:06,031 writing top-level names to topiary.egg-info/top_level.txt 2026-04-09T18:46:06,044 reading manifest file 'topiary.egg-info/SOURCES.txt' 2026-04-09T18:46:06,049 adding license file 'LICENSE' 2026-04-09T18:46:06,053 writing manifest file 'topiary.egg-info/SOURCES.txt' 2026-04-09T18:46:06,070 installing to build/bdist.linux-armv7l/wheel 2026-04-09T18:46:06,070 running install 2026-04-09T18:46:06,094 running install_lib 2026-04-09T18:46:06,099 creating build/bdist.linux-armv7l/wheel 2026-04-09T18:46:06,101 creating build/bdist.linux-armv7l/wheel/topiary 2026-04-09T18:46:06,103 copying build/lib/topiary/inputs.py -> build/bdist.linux-armv7l/wheel/./topiary 2026-04-09T18:46:06,105 copying build/lib/topiary/sequence_helpers.py -> build/bdist.linux-armv7l/wheel/./topiary 2026-04-09T18:46:06,108 creating build/bdist.linux-armv7l/wheel/topiary/cli 2026-04-09T18:46:06,109 copying build/lib/topiary/cli/filtering.py -> build/bdist.linux-armv7l/wheel/./topiary/cli 2026-04-09T18:46:06,111 copying build/lib/topiary/cli/sequence.py -> build/bdist.linux-armv7l/wheel/./topiary/cli 2026-04-09T18:46:06,113 copying build/lib/topiary/cli/outputs.py -> build/bdist.linux-armv7l/wheel/./topiary/cli 2026-04-09T18:46:06,114 copying build/lib/topiary/cli/script.py -> build/bdist.linux-armv7l/wheel/./topiary/cli 2026-04-09T18:46:06,116 copying build/lib/topiary/cli/__init__.py -> build/bdist.linux-armv7l/wheel/./topiary/cli 2026-04-09T18:46:06,118 copying build/lib/topiary/cli/errors.py -> build/bdist.linux-armv7l/wheel/./topiary/cli 2026-04-09T18:46:06,120 copying build/lib/topiary/cli/rna.py -> build/bdist.linux-armv7l/wheel/./topiary/cli 2026-04-09T18:46:06,121 copying build/lib/topiary/cli/args.py -> build/bdist.linux-armv7l/wheel/./topiary/cli 2026-04-09T18:46:06,124 copying build/lib/topiary/cli/protein_changes.py -> build/bdist.linux-armv7l/wheel/./topiary/cli 2026-04-09T18:46:06,127 creating build/bdist.linux-armv7l/wheel/topiary/rna 2026-04-09T18:46:06,128 copying build/lib/topiary/rna/cufflinks.py -> build/bdist.linux-armv7l/wheel/./topiary/rna 2026-04-09T18:46:06,130 copying build/lib/topiary/rna/common.py -> build/bdist.linux-armv7l/wheel/./topiary/rna 2026-04-09T18:46:06,132 copying build/lib/topiary/rna/__init__.py -> build/bdist.linux-armv7l/wheel/./topiary/rna 2026-04-09T18:46:06,134 copying build/lib/topiary/rna/gtf.py -> build/bdist.linux-armv7l/wheel/./topiary/rna 2026-04-09T18:46:06,135 copying build/lib/topiary/ranking.py -> build/bdist.linux-armv7l/wheel/./topiary 2026-04-09T18:46:06,138 copying build/lib/topiary/__init__.py -> build/bdist.linux-armv7l/wheel/./topiary 2026-04-09T18:46:06,140 copying build/lib/topiary/sources.py -> build/bdist.linux-armv7l/wheel/./topiary 2026-04-09T18:46:06,142 copying build/lib/topiary/filters.py -> build/bdist.linux-armv7l/wheel/./topiary 2026-04-09T18:46:06,144 copying build/lib/topiary/properties.py -> build/bdist.linux-armv7l/wheel/./topiary 2026-04-09T18:46:06,147 copying build/lib/topiary/predictor.py -> build/bdist.linux-armv7l/wheel/./topiary 2026-04-09T18:46:06,150 creating build/bdist.linux-armv7l/wheel/tests 2026-04-09T18:46:06,151 copying build/lib/tests/test_dsl_extensions.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T18:46:06,154 copying build/lib/tests/test_dataframe.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T18:46:06,156 copying build/lib/tests/test_sources.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T18:46:06,158 copying build/lib/tests/test_sources_optional.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T18:46:06,159 copying build/lib/tests/test_padding.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T18:46:06,161 copying build/lib/tests/test_integration.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T18:46:06,163 copying build/lib/tests/test_mutant_epitope_predictions_class2.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T18:46:06,166 copying build/lib/tests/test_coverage_gaps.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T18:46:06,168 copying build/lib/tests/test_args_outputs.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T18:46:06,170 copying build/lib/tests/test_cli_protein_changes.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T18:46:06,171 copying build/lib/tests/test_direct_input_regressions.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T18:46:06,173 copying build/lib/tests/test_end_to_end.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T18:46:06,176 copying build/lib/tests/common.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T18:46:06,178 copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T18:46:06,179 copying build/lib/tests/test_mutant_epitope_predictions_class1.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T18:46:06,181 copying build/lib/tests/test_load_stringtie_gtf_fpkm.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T18:46:06,183 copying build/lib/tests/test_rna_helpers.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T18:46:06,185 copying build/lib/tests/data.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T18:46:06,187 copying build/lib/tests/test_variant_expression_filters.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T18:46:06,188 copying build/lib/tests/test_epitopes_from_commandline_args.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T18:46:06,190 copying build/lib/tests/test_effect_expression_filters.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T18:46:06,192 copying build/lib/tests/test_inputs.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T18:46:06,194 copying build/lib/tests/test_ranking.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T18:46:06,198 copying build/lib/tests/test_contains_mutant_residues.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T18:46:06,200 copying build/lib/tests/test_peptide_mutation_interval.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T18:46:06,202 copying build/lib/tests/test_load_cufflinks_fpkm.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T18:46:06,204 copying build/lib/tests/test_validation_and_edge_cases.py -> build/bdist.linux-armv7l/wheel/./tests 2026-04-09T18:46:06,206 running install_egg_info 2026-04-09T18:46:06,211 Copying topiary.egg-info to build/bdist.linux-armv7l/wheel/./topiary-4.5.1-py3.11.egg-info 2026-04-09T18:46:06,224 running install_scripts 2026-04-09T18:46:06,236 creating build/bdist.linux-armv7l/wheel/topiary-4.5.1.dist-info/WHEEL 2026-04-09T18:46:06,239 creating '/tmp/pip-wheel-l2hiabqd/.tmp-l2wqugxz/topiary-4.5.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-04-09T18:46:06,243 adding 'tests/__init__.py' 2026-04-09T18:46:06,247 adding 'tests/common.py' 2026-04-09T18:46:06,250 adding 'tests/data.py' 2026-04-09T18:46:06,252 adding 'tests/test_args_outputs.py' 2026-04-09T18:46:06,253 adding 'tests/test_cli_protein_changes.py' 2026-04-09T18:46:06,255 adding 'tests/test_contains_mutant_residues.py' 2026-04-09T18:46:06,257 adding 'tests/test_coverage_gaps.py' 2026-04-09T18:46:06,258 adding 'tests/test_dataframe.py' 2026-04-09T18:46:06,260 adding 'tests/test_direct_input_regressions.py' 2026-04-09T18:46:06,262 adding 'tests/test_dsl_extensions.py' 2026-04-09T18:46:06,264 adding 'tests/test_effect_expression_filters.py' 2026-04-09T18:46:06,266 adding 'tests/test_end_to_end.py' 2026-04-09T18:46:06,267 adding 'tests/test_epitopes_from_commandline_args.py' 2026-04-09T18:46:06,268 adding 'tests/test_inputs.py' 2026-04-09T18:46:06,270 adding 'tests/test_integration.py' 2026-04-09T18:46:06,272 adding 'tests/test_load_cufflinks_fpkm.py' 2026-04-09T18:46:06,273 adding 'tests/test_load_stringtie_gtf_fpkm.py' 2026-04-09T18:46:06,274 adding 'tests/test_mutant_epitope_predictions_class1.py' 2026-04-09T18:46:06,276 adding 'tests/test_mutant_epitope_predictions_class2.py' 2026-04-09T18:46:06,277 adding 'tests/test_padding.py' 2026-04-09T18:46:06,278 adding 'tests/test_peptide_mutation_interval.py' 2026-04-09T18:46:06,281 adding 'tests/test_ranking.py' 2026-04-09T18:46:06,283 adding 'tests/test_rna_helpers.py' 2026-04-09T18:46:06,284 adding 'tests/test_sources.py' 2026-04-09T18:46:06,285 adding 'tests/test_sources_optional.py' 2026-04-09T18:46:06,287 adding 'tests/test_validation_and_edge_cases.py' 2026-04-09T18:46:06,289 adding 'tests/test_variant_expression_filters.py' 2026-04-09T18:46:06,290 adding 'topiary/__init__.py' 2026-04-09T18:46:06,292 adding 'topiary/filters.py' 2026-04-09T18:46:06,293 adding 'topiary/inputs.py' 2026-04-09T18:46:06,296 adding 'topiary/predictor.py' 2026-04-09T18:46:06,298 adding 'topiary/properties.py' 2026-04-09T18:46:06,302 adding 'topiary/ranking.py' 2026-04-09T18:46:06,304 adding 'topiary/sequence_helpers.py' 2026-04-09T18:46:06,306 adding 'topiary/sources.py' 2026-04-09T18:46:06,307 adding 'topiary/cli/__init__.py' 2026-04-09T18:46:06,310 adding 'topiary/cli/args.py' 2026-04-09T18:46:06,311 adding 'topiary/cli/errors.py' 2026-04-09T18:46:06,312 adding 'topiary/cli/filtering.py' 2026-04-09T18:46:06,314 adding 'topiary/cli/outputs.py' 2026-04-09T18:46:06,315 adding 'topiary/cli/protein_changes.py' 2026-04-09T18:46:06,317 adding 'topiary/cli/rna.py' 2026-04-09T18:46:06,318 adding 'topiary/cli/script.py' 2026-04-09T18:46:06,319 adding 'topiary/cli/sequence.py' 2026-04-09T18:46:06,321 adding 'topiary/rna/__init__.py' 2026-04-09T18:46:06,322 adding 'topiary/rna/common.py' 2026-04-09T18:46:06,324 adding 'topiary/rna/cufflinks.py' 2026-04-09T18:46:06,325 adding 'topiary/rna/gtf.py' 2026-04-09T18:46:06,329 adding 'topiary-4.5.1.dist-info/licenses/LICENSE' 2026-04-09T18:46:06,331 adding 'topiary-4.5.1.dist-info/METADATA' 2026-04-09T18:46:06,333 adding 'topiary-4.5.1.dist-info/WHEEL' 2026-04-09T18:46:06,334 adding 'topiary-4.5.1.dist-info/entry_points.txt' 2026-04-09T18:46:06,334 adding 'topiary-4.5.1.dist-info/top_level.txt' 2026-04-09T18:46:06,336 adding 'topiary-4.5.1.dist-info/RECORD' 2026-04-09T18:46:06,339 removing build/bdist.linux-armv7l/wheel 2026-04-09T18:46:06,451 Building wheel for topiary (pyproject.toml): finished with status 'done' 2026-04-09T18:46:06,456 Created wheel for topiary: filename=topiary-4.5.1-py3-none-any.whl size=89639 sha256=3dc359591cb29dcf41d7d9f698dc710d28e5cb2b10019dd67943e78591bd0155 2026-04-09T18:46:06,457 Stored in directory: /tmp/pip-ephem-wheel-cache-1jbttqyz/wheels/76/96/e0/2107826410ce93f9d6c61c27a94d640f11c27bf3e6b2b65885 2026-04-09T18:46:06,472 Successfully built topiary 2026-04-09T18:46:06,480 Removed build tracker: '/tmp/pip-build-tracker-js0huiuo'