2026-04-09T21:15:59,987 Created temporary directory: /tmp/pip-ephem-wheel-cache-yz6beb69 2026-04-09T21:15:59,989 Created temporary directory: /tmp/pip-build-tracker-4po19pae 2026-04-09T21:15:59,989 Initialized build tracking at /tmp/pip-build-tracker-4po19pae 2026-04-09T21:15:59,990 Created build tracker: /tmp/pip-build-tracker-4po19pae 2026-04-09T21:15:59,990 Entered build tracker: /tmp/pip-build-tracker-4po19pae 2026-04-09T21:15:59,991 Created temporary directory: /tmp/pip-wheel-05l50_xo 2026-04-09T21:15:59,994 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-09T21:15:59,996 Created temporary directory: /tmp/pip-ephem-wheel-cache-etcz3t2y 2026-04-09T21:16:00,018 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-09T21:16:00,022 2 location(s) to search for versions of galaxy-data: 2026-04-09T21:16:00,022 * https://pypi.org/simple/galaxy-data/ 2026-04-09T21:16:00,022 * https://www.piwheels.org/simple/galaxy-data/ 2026-04-09T21:16:00,023 Fetching project page and analyzing links: https://pypi.org/simple/galaxy-data/ 2026-04-09T21:16:00,023 Getting page https://pypi.org/simple/galaxy-data/ 2026-04-09T21:16:00,025 Found index url https://pypi.org/simple 2026-04-09T21:16:00,266 Fetched page https://pypi.org/simple/galaxy-data/ as application/vnd.pypi.simple.v1+json 2026-04-09T21:16:00,282 Found link https://files.pythonhosted.org/packages/1f/fa/d8f43cf473dabba250bd9d5fed96b1a5acc89517739bc26b91489f61fa57/galaxy-data-19.9.0.dev0.tar.gz 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https://archive1.piwheels.org/simple/galaxy-data/galaxy_data-23.1.dev0-py3-none-any.whl#sha256=d8bdc54c892782be56993b9430444e6e975e9a3c16a39ece618774bfb75789d8 (from https://www.piwheels.org/simple/galaxy-data/) (requires-python:>=3.7) 2026-04-09T21:16:00,567 Skipping link: No binaries permitted for galaxy-data: https://archive1.piwheels.org/simple/galaxy-data/galaxy_data-23.0.6-py3-none-any.whl#sha256=1e5ed6cae0510e76e323813199175a56f1b4f2cb3ed9ed3fb1ac8428f8f30be5 (from https://www.piwheels.org/simple/galaxy-data/) (requires-python:>=3.7) 2026-04-09T21:16:00,568 Skipping link: No binaries permitted for galaxy-data: https://archive1.piwheels.org/simple/galaxy-data/galaxy_data-23.0.5-py3-none-any.whl#sha256=5d7a907df2f9960fc2ecec8662179e56cdcba1fb16b8566835cf8ef787f30475 (from https://www.piwheels.org/simple/galaxy-data/) (requires-python:>=3.7) 2026-04-09T21:16:00,568 Skipping link: No binaries permitted for galaxy-data: https://archive1.piwheels.org/simple/galaxy-data/galaxy_data-23.0.4-py3-none-any.whl#sha256=3d5ad2502fa48e10c71a6fcdb795b447622b4e1123eaf7cd1f35fda65247e6e0 (from https://www.piwheels.org/simple/galaxy-data/) (requires-python:>=3.7) 2026-04-09T21:16:00,569 Skipping link: No binaries permitted for galaxy-data: https://archive1.piwheels.org/simple/galaxy-data/galaxy_data-23.0.3-py3-none-any.whl#sha256=a1ec090ccffc228e8f898443429b4bc9bc58012ca46e62e260cdf45066f73a8c (from https://www.piwheels.org/simple/galaxy-data/) (requires-python:>=3.7) 2026-04-09T21:16:00,569 Skipping link: No binaries permitted for galaxy-data: https://archive1.piwheels.org/simple/galaxy-data/galaxy_data-23.0.2-py3-none-any.whl#sha256=18a9d01cacbdcae2910e2f789500232af1ef28514b68aff9665647c9e3a4d88a (from https://www.piwheels.org/simple/galaxy-data/) (requires-python:>=3.7) 2026-04-09T21:16:00,570 Skipping link: No binaries permitted for galaxy-data: https://archive1.piwheels.org/simple/galaxy-data/galaxy_data-23.0.1-py3-none-any.whl#sha256=38f45c3df5f937ec7f557046dca6148d6b279b6706c66a18de89ab5c111c712c (from https://www.piwheels.org/simple/galaxy-data/) (requires-python:>=3.7) 2026-04-09T21:16:00,570 Skipping link: No binaries permitted for galaxy-data: https://archive1.piwheels.org/simple/galaxy-data/galaxy_data-22.1.1-py2.py3-none-any.whl#sha256=ecc837f08336d9e32b26184803927f5386aec84e8d67d2a30e198498bb951b19 (from https://www.piwheels.org/simple/galaxy-data/) 2026-04-09T21:16:00,571 Skipping link: No binaries permitted for galaxy-data: https://archive1.piwheels.org/simple/galaxy-data/galaxy_data-21.9.0-py2.py3-none-any.whl#sha256=7bd7fa30190a424a66c62f96012c6dd667990fc8ae39dcb1e4ddc6811e6c9a4d (from https://www.piwheels.org/simple/galaxy-data/) 2026-04-09T21:16:00,572 Skipping link: No binaries permitted for galaxy-data: https://archive1.piwheels.org/simple/galaxy-data/galaxy_data-20.9.1-py2.py3-none-any.whl#sha256=6a456ec927643665dae5c649a6a18460d79474bd5e1277274ea2174e952f94c2 (from https://www.piwheels.org/simple/galaxy-data/) 2026-04-09T21:16:00,572 Skipping link: No binaries permitted for galaxy-data: https://archive1.piwheels.org/simple/galaxy-data/galaxy_data-20.9.0-py2.py3-none-any.whl#sha256=ec937bfcfff347039541431d9724018b14a295ecc49f0831145f8947264a5d3b (from https://www.piwheels.org/simple/galaxy-data/) 2026-04-09T21:16:00,573 Skipping link: No binaries permitted for galaxy-data: https://archive1.piwheels.org/simple/galaxy-data/galaxy_data-20.5.0-py2.py3-none-any.whl#sha256=7ee3d488fc5ef68f91d03116383adac3f4db74334062abb069386b01b39d80f4 (from https://www.piwheels.org/simple/galaxy-data/) 2026-04-09T21:16:00,573 Skipping link: No binaries permitted for galaxy-data: https://archive1.piwheels.org/simple/galaxy-data/galaxy_data-19.9.0.dev3-py2.py3-none-any.whl#sha256=52651203dfccbfdf8b37326330598785a8c0002d69a461fba17f6a7031bdce85 (from https://www.piwheels.org/simple/galaxy-data/) 2026-04-09T21:16:00,574 Skipping link: No binaries permitted for galaxy-data: https://archive1.piwheels.org/simple/galaxy-data/galaxy_data-19.9.0.dev2-py2.py3-none-any.whl#sha256=be58e78b806fa3f85a8a8d45b7f040439a0c95d461003172d2b7b4430002d33f (from https://www.piwheels.org/simple/galaxy-data/) 2026-04-09T21:16:00,574 Skipping link: No binaries permitted for galaxy-data: https://archive1.piwheels.org/simple/galaxy-data/galaxy_data-19.9.0.dev1-py2.py3-none-any.whl#sha256=ef242b3d745ced066c572d137b43095eb7df42074a5e1e8eca76ea52cf065a92 (from https://www.piwheels.org/simple/galaxy-data/) 2026-04-09T21:16:00,575 Skipping link: No binaries permitted for galaxy-data: https://archive1.piwheels.org/simple/galaxy-data/galaxy_data-19.9.0.dev0-py3-none-any.whl#sha256=d4831c48a07316758b909a471cb006e270083f3ceccc3d174f78b44b07a914ff (from https://www.piwheels.org/simple/galaxy-data/) 2026-04-09T21:16:00,575 Skipping link: not a file: https://www.piwheels.org/simple/galaxy-data/ 2026-04-09T21:16:00,576 Skipping link: not a file: https://pypi.org/simple/galaxy-data/ 2026-04-09T21:16:00,602 Given no hashes to check 1 links for project 'galaxy-data': discarding no candidates 2026-04-09T21:16:00,622 Collecting galaxy-data==26.0.1.dev0 2026-04-09T21:16:00,624 Created temporary directory: /tmp/pip-unpack-y2b8bhfj 2026-04-09T21:16:00,867 Downloading galaxy_data-26.0.1.dev0.tar.gz (672 kB) 2026-04-09T21:16:02,012 Added galaxy-data==26.0.1.dev0 from https://files.pythonhosted.org/packages/2d/c5/51b1e18ac2d823f01873620b0324f3ea0fa2681b09563c00a4d586e94805/galaxy_data-26.0.1.dev0.tar.gz to build tracker '/tmp/pip-build-tracker-4po19pae' 2026-04-09T21:16:02,016 Created temporary directory: /tmp/pip-build-env-b_w4ptr1 2026-04-09T21:16:02,022 Installing build dependencies: started 2026-04-09T21:16:02,024 Running command pip subprocess to install build dependencies 2026-04-09T21:16:02,074 Error processing line 1 of /home/piwheels/.local/lib/python3.11/site-packages/outofcuda_hook.pth: 2026-04-09T21:16:02,130 Traceback (most recent call last): 2026-04-09T21:16:02,131 File "", line 192, in addpackage 2026-04-09T21:16:02,131 File "", line 1, in 2026-04-09T21:16:02,132 ModuleNotFoundError: No module named 'outofcuda' 2026-04-09T21:16:02,133 Remainder of file ignored 2026-04-09T21:16:03,294 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-04-09T21:16:03,740 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-09T21:16:03,765 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-09T21:16:05,536 Collecting setuptools 2026-04-09T21:16:05,619 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-04-09T21:16:08,563 Installing collected packages: setuptools 2026-04-09T21:16:11,736 Successfully installed setuptools-82.0.1 2026-04-09T21:16:12,003 Installing build dependencies: finished with status 'done' 2026-04-09T21:16:12,009 Getting requirements to build wheel: started 2026-04-09T21:16:12,010 Running command Getting requirements to build wheel 2026-04-09T21:16:12,645 /tmp/pip-build-env-b_w4ptr1/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:75: _MissingDynamic: `keywords` defined outside of `pyproject.toml` is ignored. 2026-04-09T21:16:12,645 !! 2026-04-09T21:16:12,646 ******************************************************************************** 2026-04-09T21:16:12,646 The following seems to be defined outside of `pyproject.toml`: 2026-04-09T21:16:12,647 `keywords = ['Galaxy']` 2026-04-09T21:16:12,648 According to the spec (see the link below), however, setuptools CANNOT 2026-04-09T21:16:12,649 consider this value unless `keywords` is listed as `dynamic`. 2026-04-09T21:16:12,650 https://packaging.python.org/en/latest/specifications/pyproject-toml/#declaring-project-metadata-the-project-table 2026-04-09T21:16:12,651 To prevent this problem, you can list `keywords` under `dynamic` or alternatively 2026-04-09T21:16:12,651 remove the `[project]` table from your file and rely entirely on other means of 2026-04-09T21:16:12,652 configuration. 2026-04-09T21:16:12,652 ******************************************************************************** 2026-04-09T21:16:12,654 !! 2026-04-09T21:16:12,654 _handle_missing_dynamic(dist, project_table) 2026-04-09T21:16:12,655 /tmp/pip-build-env-b_w4ptr1/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:75: _MissingDynamic: `classifiers` defined outside of `pyproject.toml` is ignored. 2026-04-09T21:16:12,655 !! 2026-04-09T21:16:12,657 ******************************************************************************** 2026-04-09T21:16:12,657 The following seems to be defined outside of `pyproject.toml`: 2026-04-09T21:16:12,658 `classifiers = ['Development Status :: 5 - Production/Stable', 'Environment :: Console', 'Intended Audience :: Developers', 'Natural Language :: English', 'Operating System :: POSIX', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Programming Language :: Python :: 3.13', 'Programming Language :: Python :: 3.14', 'Topic :: Software Development', 'Topic :: Software Development :: Code Generators', 'Topic :: Software Development :: Testing']` 2026-04-09T21:16:12,660 According to the spec (see the link below), however, setuptools CANNOT 2026-04-09T21:16:12,660 consider this value unless `classifiers` is listed as `dynamic`. 2026-04-09T21:16:12,661 https://packaging.python.org/en/latest/specifications/pyproject-toml/#declaring-project-metadata-the-project-table 2026-04-09T21:16:12,662 To prevent this problem, you can list `classifiers` under `dynamic` or alternatively 2026-04-09T21:16:12,663 remove the `[project]` table from your file and rely entirely on other means of 2026-04-09T21:16:12,664 configuration. 2026-04-09T21:16:12,664 ******************************************************************************** 2026-04-09T21:16:12,666 !! 2026-04-09T21:16:12,666 _handle_missing_dynamic(dist, project_table) 2026-04-09T21:16:12,667 /tmp/pip-build-env-b_w4ptr1/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:75: _MissingDynamic: `scripts` defined outside of `pyproject.toml` is ignored. 2026-04-09T21:16:12,668 !! 2026-04-09T21:16:12,669 ******************************************************************************** 2026-04-09T21:16:12,669 The following seems to be defined outside of `pyproject.toml`: 2026-04-09T21:16:12,670 `scripts = ['galaxy-build-objects = galaxy.model.store.build_objects:main', 'galaxy-load-objects = galaxy.model.store.load_objects:main', 'galaxy-manage-db = galaxy.model.orm.scripts:manage_db', 'galaxy-prune-histories = galaxy.model.scripts:prune_history_table', 'galaxy-delete-sessions = galaxy.model.scripts:delete_galaxy_sessions', 'galaxy-delete-job-metrics = galaxy.model.scripts:delete_job_metrics']` 2026-04-09T21:16:12,671 According to the spec (see the link below), however, setuptools CANNOT 2026-04-09T21:16:12,672 consider this value unless `scripts` is listed as `dynamic`. 2026-04-09T21:16:12,673 https://packaging.python.org/en/latest/specifications/pyproject-toml/#declaring-project-metadata-the-project-table 2026-04-09T21:16:12,673 To prevent this problem, you can list `scripts` under `dynamic` or alternatively 2026-04-09T21:16:12,674 remove the `[project]` table from your file and rely entirely on other means of 2026-04-09T21:16:12,674 configuration. 2026-04-09T21:16:12,675 ******************************************************************************** 2026-04-09T21:16:12,676 !! 2026-04-09T21:16:12,676 _handle_missing_dynamic(dist, project_table) 2026-04-09T21:16:12,740 running egg_info 2026-04-09T21:16:12,746 writing galaxy_data.egg-info/PKG-INFO 2026-04-09T21:16:12,754 writing dependency_links to galaxy_data.egg-info/dependency_links.txt 2026-04-09T21:16:12,757 writing requirements to galaxy_data.egg-info/requires.txt 2026-04-09T21:16:12,758 writing top-level names to galaxy_data.egg-info/top_level.txt 2026-04-09T21:16:12,803 reading manifest file 'galaxy_data.egg-info/SOURCES.txt' 2026-04-09T21:16:12,840 reading manifest template 'MANIFEST.in' 2026-04-09T21:16:12,886 adding license file 'LICENSE' 2026-04-09T21:16:12,906 writing manifest file 'galaxy_data.egg-info/SOURCES.txt' 2026-04-09T21:16:13,004 Getting requirements to build wheel: finished with status 'done' 2026-04-09T21:16:13,007 Created temporary directory: /tmp/pip-modern-metadata-uhmqocgt 2026-04-09T21:16:13,009 Preparing metadata (pyproject.toml): started 2026-04-09T21:16:13,011 Running command Preparing metadata (pyproject.toml) 2026-04-09T21:16:13,590 /tmp/pip-build-env-b_w4ptr1/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:75: _MissingDynamic: `keywords` defined outside of `pyproject.toml` is ignored. 2026-04-09T21:16:13,590 !! 2026-04-09T21:16:13,592 ******************************************************************************** 2026-04-09T21:16:13,592 The following seems to be defined outside of `pyproject.toml`: 2026-04-09T21:16:13,594 `keywords = ['Galaxy']` 2026-04-09T21:16:13,595 According to the spec (see the link below), however, setuptools CANNOT 2026-04-09T21:16:13,595 consider this value unless `keywords` is listed as `dynamic`. 2026-04-09T21:16:13,597 https://packaging.python.org/en/latest/specifications/pyproject-toml/#declaring-project-metadata-the-project-table 2026-04-09T21:16:13,598 To prevent this problem, you can list `keywords` under `dynamic` or alternatively 2026-04-09T21:16:13,598 remove the `[project]` table from your file and rely entirely on other means of 2026-04-09T21:16:13,599 configuration. 2026-04-09T21:16:13,599 ******************************************************************************** 2026-04-09T21:16:13,601 !! 2026-04-09T21:16:13,601 _handle_missing_dynamic(dist, project_table) 2026-04-09T21:16:13,602 /tmp/pip-build-env-b_w4ptr1/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:75: _MissingDynamic: `classifiers` defined outside of `pyproject.toml` is ignored. 2026-04-09T21:16:13,603 !! 2026-04-09T21:16:13,604 ******************************************************************************** 2026-04-09T21:16:13,605 The following seems to be defined outside of `pyproject.toml`: 2026-04-09T21:16:13,605 `classifiers = ['Development Status :: 5 - Production/Stable', 'Environment :: Console', 'Intended Audience :: Developers', 'Natural Language :: English', 'Operating System :: POSIX', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Programming Language :: Python :: 3.13', 'Programming Language :: Python :: 3.14', 'Topic :: Software Development', 'Topic :: Software Development :: Code Generators', 'Topic :: Software Development :: Testing']` 2026-04-09T21:16:13,606 According to the spec (see the link below), however, setuptools CANNOT 2026-04-09T21:16:13,607 consider this value unless `classifiers` is listed as `dynamic`. 2026-04-09T21:16:13,608 https://packaging.python.org/en/latest/specifications/pyproject-toml/#declaring-project-metadata-the-project-table 2026-04-09T21:16:13,609 To prevent this problem, you can list `classifiers` under `dynamic` or alternatively 2026-04-09T21:16:13,609 remove the `[project]` table from your file and rely entirely on other means of 2026-04-09T21:16:13,610 configuration. 2026-04-09T21:16:13,610 ******************************************************************************** 2026-04-09T21:16:13,611 !! 2026-04-09T21:16:13,612 _handle_missing_dynamic(dist, project_table) 2026-04-09T21:16:13,613 /tmp/pip-build-env-b_w4ptr1/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:75: _MissingDynamic: `scripts` defined outside of `pyproject.toml` is ignored. 2026-04-09T21:16:13,613 !! 2026-04-09T21:16:13,614 ******************************************************************************** 2026-04-09T21:16:13,615 The following seems to be defined outside of `pyproject.toml`: 2026-04-09T21:16:13,616 `scripts = ['galaxy-build-objects = galaxy.model.store.build_objects:main', 'galaxy-load-objects = galaxy.model.store.load_objects:main', 'galaxy-manage-db = galaxy.model.orm.scripts:manage_db', 'galaxy-prune-histories = galaxy.model.scripts:prune_history_table', 'galaxy-delete-sessions = galaxy.model.scripts:delete_galaxy_sessions', 'galaxy-delete-job-metrics = galaxy.model.scripts:delete_job_metrics']` 2026-04-09T21:16:13,617 According to the spec (see the link below), however, setuptools CANNOT 2026-04-09T21:16:13,618 consider this value unless `scripts` is listed as `dynamic`. 2026-04-09T21:16:13,619 https://packaging.python.org/en/latest/specifications/pyproject-toml/#declaring-project-metadata-the-project-table 2026-04-09T21:16:13,620 To prevent this problem, you can list `scripts` under `dynamic` or alternatively 2026-04-09T21:16:13,620 remove the `[project]` table from your file and rely entirely on other means of 2026-04-09T21:16:13,621 configuration. 2026-04-09T21:16:13,621 ******************************************************************************** 2026-04-09T21:16:13,623 !! 2026-04-09T21:16:13,623 _handle_missing_dynamic(dist, project_table) 2026-04-09T21:16:13,683 running dist_info 2026-04-09T21:16:13,694 creating /tmp/pip-modern-metadata-uhmqocgt/galaxy_data.egg-info 2026-04-09T21:16:13,695 writing /tmp/pip-modern-metadata-uhmqocgt/galaxy_data.egg-info/PKG-INFO 2026-04-09T21:16:13,704 writing dependency_links to /tmp/pip-modern-metadata-uhmqocgt/galaxy_data.egg-info/dependency_links.txt 2026-04-09T21:16:13,707 writing requirements to /tmp/pip-modern-metadata-uhmqocgt/galaxy_data.egg-info/requires.txt 2026-04-09T21:16:13,709 writing top-level names to /tmp/pip-modern-metadata-uhmqocgt/galaxy_data.egg-info/top_level.txt 2026-04-09T21:16:13,710 writing manifest file '/tmp/pip-modern-metadata-uhmqocgt/galaxy_data.egg-info/SOURCES.txt' 2026-04-09T21:16:13,749 reading manifest file '/tmp/pip-modern-metadata-uhmqocgt/galaxy_data.egg-info/SOURCES.txt' 2026-04-09T21:16:13,751 reading manifest template 'MANIFEST.in' 2026-04-09T21:16:13,789 adding license file 'LICENSE' 2026-04-09T21:16:13,804 writing manifest file '/tmp/pip-modern-metadata-uhmqocgt/galaxy_data.egg-info/SOURCES.txt' 2026-04-09T21:16:13,805 creating '/tmp/pip-modern-metadata-uhmqocgt/galaxy_data-26.0.1.dev0.dist-info' 2026-04-09T21:16:13,935 Preparing metadata (pyproject.toml): finished with status 'done' 2026-04-09T21:16:13,946 Source in /tmp/pip-wheel-05l50_xo/galaxy-data_02bbd948266d4281b5644e5cd802577c has version 26.0.1.dev0, which satisfies requirement galaxy-data==26.0.1.dev0 from https://files.pythonhosted.org/packages/2d/c5/51b1e18ac2d823f01873620b0324f3ea0fa2681b09563c00a4d586e94805/galaxy_data-26.0.1.dev0.tar.gz 2026-04-09T21:16:13,947 Removed galaxy-data==26.0.1.dev0 from https://files.pythonhosted.org/packages/2d/c5/51b1e18ac2d823f01873620b0324f3ea0fa2681b09563c00a4d586e94805/galaxy_data-26.0.1.dev0.tar.gz from build tracker '/tmp/pip-build-tracker-4po19pae' 2026-04-09T21:16:13,963 Created temporary directory: /tmp/pip-unpack-7mxff43r 2026-04-09T21:16:13,963 Building wheels for collected packages: galaxy-data 2026-04-09T21:16:13,968 Created temporary directory: /tmp/pip-wheel-ku1zw1p4 2026-04-09T21:16:13,968 Destination directory: /tmp/pip-wheel-ku1zw1p4 2026-04-09T21:16:13,970 Building wheel for galaxy-data (pyproject.toml): started 2026-04-09T21:16:13,971 Running command Building wheel for galaxy-data (pyproject.toml) 2026-04-09T21:16:14,534 /tmp/pip-build-env-b_w4ptr1/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:75: _MissingDynamic: `keywords` defined outside of `pyproject.toml` is ignored. 2026-04-09T21:16:14,534 !! 2026-04-09T21:16:14,535 ******************************************************************************** 2026-04-09T21:16:14,536 The following seems to be defined outside of `pyproject.toml`: 2026-04-09T21:16:14,537 `keywords = ['Galaxy']` 2026-04-09T21:16:14,538 According to the spec (see the link below), however, setuptools CANNOT 2026-04-09T21:16:14,539 consider this value unless `keywords` is listed as `dynamic`. 2026-04-09T21:16:14,540 https://packaging.python.org/en/latest/specifications/pyproject-toml/#declaring-project-metadata-the-project-table 2026-04-09T21:16:14,541 To prevent this problem, you can list `keywords` under `dynamic` or alternatively 2026-04-09T21:16:14,542 remove the `[project]` table from your file and rely entirely on other means of 2026-04-09T21:16:14,543 configuration. 2026-04-09T21:16:14,543 ******************************************************************************** 2026-04-09T21:16:14,544 !! 2026-04-09T21:16:14,545 _handle_missing_dynamic(dist, project_table) 2026-04-09T21:16:14,545 /tmp/pip-build-env-b_w4ptr1/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:75: _MissingDynamic: `classifiers` defined outside of `pyproject.toml` is ignored. 2026-04-09T21:16:14,546 !! 2026-04-09T21:16:14,548 ******************************************************************************** 2026-04-09T21:16:14,548 The following seems to be defined outside of `pyproject.toml`: 2026-04-09T21:16:14,549 `classifiers = ['Development Status :: 5 - Production/Stable', 'Environment :: Console', 'Intended Audience :: Developers', 'Natural Language :: English', 'Operating System :: POSIX', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 3.10', 'Programming Language :: Python :: 3.11', 'Programming Language :: Python :: 3.12', 'Programming Language :: Python :: 3.13', 'Programming Language :: Python :: 3.14', 'Topic :: Software Development', 'Topic :: Software Development :: Code Generators', 'Topic :: Software Development :: Testing']` 2026-04-09T21:16:14,551 According to the spec (see the link below), however, setuptools CANNOT 2026-04-09T21:16:14,551 consider this value unless `classifiers` is listed as `dynamic`. 2026-04-09T21:16:14,552 https://packaging.python.org/en/latest/specifications/pyproject-toml/#declaring-project-metadata-the-project-table 2026-04-09T21:16:14,553 To prevent this problem, you can list `classifiers` under `dynamic` or alternatively 2026-04-09T21:16:14,554 remove the `[project]` table from your file and rely entirely on other means of 2026-04-09T21:16:14,554 configuration. 2026-04-09T21:16:14,555 ******************************************************************************** 2026-04-09T21:16:14,556 !! 2026-04-09T21:16:14,556 _handle_missing_dynamic(dist, project_table) 2026-04-09T21:16:14,556 /tmp/pip-build-env-b_w4ptr1/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:75: _MissingDynamic: `scripts` defined outside of `pyproject.toml` is ignored. 2026-04-09T21:16:14,557 !! 2026-04-09T21:16:14,558 ******************************************************************************** 2026-04-09T21:16:14,558 The following seems to be defined outside of `pyproject.toml`: 2026-04-09T21:16:14,559 `scripts = ['galaxy-build-objects = galaxy.model.store.build_objects:main', 'galaxy-load-objects = galaxy.model.store.load_objects:main', 'galaxy-manage-db = galaxy.model.orm.scripts:manage_db', 'galaxy-prune-histories = galaxy.model.scripts:prune_history_table', 'galaxy-delete-sessions = galaxy.model.scripts:delete_galaxy_sessions', 'galaxy-delete-job-metrics = galaxy.model.scripts:delete_job_metrics']` 2026-04-09T21:16:14,560 According to the spec (see the link below), however, setuptools CANNOT 2026-04-09T21:16:14,561 consider this value unless `scripts` is listed as `dynamic`. 2026-04-09T21:16:14,562 https://packaging.python.org/en/latest/specifications/pyproject-toml/#declaring-project-metadata-the-project-table 2026-04-09T21:16:14,564 To prevent this problem, you can list `scripts` under `dynamic` or alternatively 2026-04-09T21:16:14,564 remove the `[project]` table from your file and rely entirely on other means of 2026-04-09T21:16:14,565 configuration. 2026-04-09T21:16:14,565 ******************************************************************************** 2026-04-09T21:16:14,566 !! 2026-04-09T21:16:14,567 _handle_missing_dynamic(dist, project_table) 2026-04-09T21:16:14,615 running bdist_wheel 2026-04-09T21:16:14,633 running build 2026-04-09T21:16:14,634 running build_py 2026-04-09T21:16:14,640 creating build/lib/galaxy 2026-04-09T21:16:14,642 copying galaxy/__init__.py -> build/lib/galaxy 2026-04-09T21:16:14,645 creating build/lib/galaxy/security 2026-04-09T21:16:14,646 copying galaxy/security/__init__.py -> build/lib/galaxy/security 2026-04-09T21:16:14,649 copying galaxy/security/vault.py -> build/lib/galaxy/security 2026-04-09T21:16:14,651 copying galaxy/security/ssh_util.py -> build/lib/galaxy/security 2026-04-09T21:16:14,653 copying galaxy/security/passwords.py -> build/lib/galaxy/security 2026-04-09T21:16:14,655 copying galaxy/security/validate_user_input.py -> build/lib/galaxy/security 2026-04-09T21:16:14,658 copying galaxy/security/idencoding.py -> build/lib/galaxy/security 2026-04-09T21:16:14,660 copying galaxy/security/object_wrapper.py -> build/lib/galaxy/security 2026-04-09T21:16:14,663 creating build/lib/galaxy/quota 2026-04-09T21:16:14,664 copying galaxy/quota/__init__.py -> build/lib/galaxy/quota 2026-04-09T21:16:14,667 copying galaxy/quota/_schema.py -> build/lib/galaxy/quota 2026-04-09T21:16:14,671 creating build/lib/galaxy/model 2026-04-09T21:16:14,672 copying galaxy/model/__init__.py -> build/lib/galaxy/model 2026-04-09T21:16:14,686 copying galaxy/model/none_like.py -> build/lib/galaxy/model 2026-04-09T21:16:14,689 copying galaxy/model/mapping.py -> build/lib/galaxy/model 2026-04-09T21:16:14,690 copying galaxy/model/custom_types.py -> build/lib/galaxy/model 2026-04-09T21:16:14,693 copying galaxy/model/scoped_session.py -> build/lib/galaxy/model 2026-04-09T21:16:14,695 copying galaxy/model/database_utils.py -> build/lib/galaxy/model 2026-04-09T21:16:14,697 copying galaxy/model/database_object_names.py -> build/lib/galaxy/model 2026-04-09T21:16:14,699 copying galaxy/model/deferred.py -> build/lib/galaxy/model 2026-04-09T21:16:14,702 copying galaxy/model/database_heartbeat.py -> build/lib/galaxy/model 2026-04-09T21:16:14,705 copying galaxy/model/index_filter_util.py -> build/lib/galaxy/model 2026-04-09T21:16:14,707 copying galaxy/model/metadata.py -> build/lib/galaxy/model 2026-04-09T21:16:14,710 copying galaxy/model/tags.py -> build/lib/galaxy/model 2026-04-09T21:16:14,713 copying galaxy/model/base.py -> build/lib/galaxy/model 2026-04-09T21:16:14,716 copying galaxy/model/dereference.py -> build/lib/galaxy/model 2026-04-09T21:16:14,719 copying galaxy/model/keyset_token_pagination.py -> build/lib/galaxy/model 2026-04-09T21:16:14,721 copying galaxy/model/security.py -> build/lib/galaxy/model 2026-04-09T21:16:14,728 copying galaxy/model/item_attrs.py -> build/lib/galaxy/model 2026-04-09T21:16:14,732 creating build/lib/galaxy/datatypes 2026-04-09T21:16:14,733 copying galaxy/datatypes/flow.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,736 copying galaxy/datatypes/mothur.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,739 copying galaxy/datatypes/data.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,743 copying galaxy/datatypes/interval.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,747 copying galaxy/datatypes/genetics.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,751 copying galaxy/datatypes/__init__.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,753 copying galaxy/datatypes/qualityscore.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,755 copying galaxy/datatypes/protocols.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,757 copying galaxy/datatypes/_schema.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,760 copying galaxy/datatypes/tracks.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,762 copying galaxy/datatypes/constructive_solid_geometry.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,765 copying galaxy/datatypes/microarrays.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,768 copying galaxy/datatypes/triples.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,770 copying galaxy/datatypes/text.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,774 copying galaxy/datatypes/msa.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,776 copying galaxy/datatypes/xml.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,779 copying galaxy/datatypes/sniff.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,782 copying galaxy/datatypes/spaln.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,784 copying galaxy/datatypes/images.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,787 copying galaxy/datatypes/anvio.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,789 copying galaxy/datatypes/registry.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,792 copying galaxy/datatypes/plant_tribes.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,794 copying galaxy/datatypes/larch.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,797 copying galaxy/datatypes/hdf5.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,799 copying galaxy/datatypes/proteomics.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,802 copying galaxy/datatypes/metadata.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,803 copying galaxy/datatypes/coverage.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,805 copying galaxy/datatypes/isa.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,808 copying galaxy/datatypes/gis.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,810 copying galaxy/datatypes/ngsindex.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,812 copying galaxy/datatypes/binary.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,817 copying galaxy/datatypes/neo4j.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,820 copying galaxy/datatypes/tabular.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,823 copying galaxy/datatypes/sequence.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,827 copying galaxy/datatypes/graph.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,830 copying galaxy/datatypes/upload_util.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,832 copying galaxy/datatypes/blast.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,835 copying galaxy/datatypes/chrominfo.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,838 copying galaxy/datatypes/molecules.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,842 copying galaxy/datatypes/chain.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,844 copying galaxy/datatypes/qiime2.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,847 copying galaxy/datatypes/phylip.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,850 copying galaxy/datatypes/annotation.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,852 copying galaxy/datatypes/speech.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,854 copying galaxy/datatypes/metacyto.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,857 copying galaxy/datatypes/assembly.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,859 copying galaxy/datatypes/checkers.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,862 copying galaxy/datatypes/goldenpath.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,865 copying galaxy/datatypes/media.py -> build/lib/galaxy/datatypes 2026-04-09T21:16:14,868 creating build/lib/galaxy/model/orm 2026-04-09T21:16:14,870 copying galaxy/model/orm/scripts.py -> build/lib/galaxy/model/orm 2026-04-09T21:16:14,872 copying galaxy/model/orm/__init__.py -> build/lib/galaxy/model/orm 2026-04-09T21:16:14,875 copying galaxy/model/orm/util.py -> build/lib/galaxy/model/orm 2026-04-09T21:16:14,877 copying galaxy/model/orm/now.py -> build/lib/galaxy/model/orm 2026-04-09T21:16:14,879 copying galaxy/model/orm/engine_factory.py -> build/lib/galaxy/model/orm 2026-04-09T21:16:14,882 creating build/lib/galaxy/model/triggers 2026-04-09T21:16:14,884 copying galaxy/model/triggers/__init__.py -> build/lib/galaxy/model/triggers 2026-04-09T21:16:14,886 copying galaxy/model/triggers/update_audit_table.py -> build/lib/galaxy/model/triggers 2026-04-09T21:16:14,889 creating build/lib/galaxy/model/migrations 2026-04-09T21:16:14,890 copying galaxy/model/migrations/scripts.py -> build/lib/galaxy/model/migrations 2026-04-09T21:16:14,894 copying galaxy/model/migrations/__init__.py -> build/lib/galaxy/model/migrations 2026-04-09T21:16:14,896 copying galaxy/model/migrations/exceptions.py -> build/lib/galaxy/model/migrations 2026-04-09T21:16:14,899 copying galaxy/model/migrations/util.py -> build/lib/galaxy/model/migrations 2026-04-09T21:16:14,902 copying galaxy/model/migrations/dbrevisions.py -> build/lib/galaxy/model/migrations 2026-04-09T21:16:14,904 copying galaxy/model/migrations/base.py -> build/lib/galaxy/model/migrations 2026-04-09T21:16:14,907 copying galaxy/model/migrations/dbscript.py -> build/lib/galaxy/model/migrations 2026-04-09T21:16:14,909 creating build/lib/galaxy/model/store 2026-04-09T21:16:14,910 copying galaxy/model/store/__init__.py -> build/lib/galaxy/model/store 2026-04-09T21:16:14,916 copying galaxy/model/store/load_objects.py -> build/lib/galaxy/model/store 2026-04-09T21:16:14,918 copying galaxy/model/store/discover.py -> build/lib/galaxy/model/store 2026-04-09T21:16:14,921 copying galaxy/model/store/build_objects.py -> build/lib/galaxy/model/store 2026-04-09T21:16:14,924 copying galaxy/model/store/_bco_convert_utils.py -> build/lib/galaxy/model/store 2026-04-09T21:16:14,926 copying galaxy/model/store/ro_crate_utils.py -> build/lib/galaxy/model/store 2026-04-09T21:16:14,929 creating build/lib/galaxy/model/tool_shed_install 2026-04-09T21:16:14,930 copying galaxy/model/tool_shed_install/__init__.py -> build/lib/galaxy/model/tool_shed_install 2026-04-09T21:16:14,933 copying galaxy/model/tool_shed_install/mapping.py -> build/lib/galaxy/model/tool_shed_install 2026-04-09T21:16:14,935 creating build/lib/galaxy/model/unittest_utils 2026-04-09T21:16:14,936 copying galaxy/model/unittest_utils/__init__.py -> build/lib/galaxy/model/unittest_utils 2026-04-09T21:16:14,938 copying galaxy/model/unittest_utils/model_testing_utils.py -> build/lib/galaxy/model/unittest_utils 2026-04-09T21:16:14,940 copying galaxy/model/unittest_utils/store_fixtures.py -> build/lib/galaxy/model/unittest_utils 2026-04-09T21:16:14,943 copying galaxy/model/unittest_utils/data_app.py -> build/lib/galaxy/model/unittest_utils 2026-04-09T21:16:14,945 copying galaxy/model/unittest_utils/db_helpers.py -> build/lib/galaxy/model/unittest_utils 2026-04-09T21:16:14,947 copying galaxy/model/unittest_utils/utils.py -> build/lib/galaxy/model/unittest_utils 2026-04-09T21:16:14,948 copying galaxy/model/unittest_utils/migration_scripts_testing_utils.py -> build/lib/galaxy/model/unittest_utils 2026-04-09T21:16:14,950 copying galaxy/model/unittest_utils/beaker_testing_utils.py -> build/lib/galaxy/model/unittest_utils 2026-04-09T21:16:14,953 creating build/lib/galaxy/model/dataset_collections 2026-04-09T21:16:14,954 copying galaxy/model/dataset_collections/__init__.py -> build/lib/galaxy/model/dataset_collections 2026-04-09T21:16:14,956 copying galaxy/model/dataset_collections/auto_pairing.py -> build/lib/galaxy/model/dataset_collections 2026-04-09T21:16:14,958 copying galaxy/model/dataset_collections/matching.py -> build/lib/galaxy/model/dataset_collections 2026-04-09T21:16:14,960 copying galaxy/model/dataset_collections/builder.py -> build/lib/galaxy/model/dataset_collections 2026-04-09T21:16:14,963 copying galaxy/model/dataset_collections/adapters.py -> build/lib/galaxy/model/dataset_collections 2026-04-09T21:16:14,965 copying galaxy/model/dataset_collections/query.py -> build/lib/galaxy/model/dataset_collections 2026-04-09T21:16:14,967 copying galaxy/model/dataset_collections/auto_identifiers.py -> build/lib/galaxy/model/dataset_collections 2026-04-09T21:16:14,969 copying galaxy/model/dataset_collections/registry.py -> build/lib/galaxy/model/dataset_collections 2026-04-09T21:16:14,971 copying galaxy/model/dataset_collections/rule_target_models.py -> build/lib/galaxy/model/dataset_collections 2026-04-09T21:16:14,973 copying galaxy/model/dataset_collections/workbook_util.py -> build/lib/galaxy/model/dataset_collections 2026-04-09T21:16:14,976 copying galaxy/model/dataset_collections/type_description.py -> build/lib/galaxy/model/dataset_collections 2026-04-09T21:16:14,978 copying galaxy/model/dataset_collections/rule_target_columns.py -> build/lib/galaxy/model/dataset_collections 2026-04-09T21:16:14,980 copying galaxy/model/dataset_collections/structure.py -> build/lib/galaxy/model/dataset_collections 2026-04-09T21:16:14,983 copying galaxy/model/dataset_collections/subcollections.py -> build/lib/galaxy/model/dataset_collections 2026-04-09T21:16:14,985 creating build/lib/galaxy/model/db 2026-04-09T21:16:14,986 copying galaxy/model/db/__init__.py -> build/lib/galaxy/model/db 2026-04-09T21:16:14,988 copying galaxy/model/db/role.py -> build/lib/galaxy/model/db 2026-04-09T21:16:14,990 copying galaxy/model/db/library.py -> build/lib/galaxy/model/db 2026-04-09T21:16:14,992 copying galaxy/model/db/user.py -> build/lib/galaxy/model/db 2026-04-09T21:16:14,994 creating build/lib/galaxy/model/scripts 2026-04-09T21:16:14,996 copying galaxy/model/scripts/__init__.py -> build/lib/galaxy/model/scripts 2026-04-09T21:16:14,997 copying galaxy/model/scripts/delete_job_metrics.py -> build/lib/galaxy/model/scripts 2026-04-09T21:16:14,999 copying galaxy/model/scripts/history_table_pruner.py -> build/lib/galaxy/model/scripts 2026-04-09T21:16:15,002 copying galaxy/model/scripts/prune_history_table.py -> build/lib/galaxy/model/scripts 2026-04-09T21:16:15,004 copying galaxy/model/scripts/delete_galaxy_sessions.py -> build/lib/galaxy/model/scripts 2026-04-09T21:16:15,006 creating build/lib/galaxy/model/migrations/data_fixes 2026-04-09T21:16:15,007 copying galaxy/model/migrations/data_fixes/association_table_fixer.py -> build/lib/galaxy/model/migrations/data_fixes 2026-04-09T21:16:15,009 copying galaxy/model/migrations/data_fixes/__init__.py -> build/lib/galaxy/model/migrations/data_fixes 2026-04-09T21:16:15,011 copying galaxy/model/migrations/data_fixes/user_table_fixer.py -> build/lib/galaxy/model/migrations/data_fixes 2026-04-09T21:16:15,014 copying galaxy/model/migrations/data_fixes/custos_to_psa.py -> build/lib/galaxy/model/migrations/data_fixes 2026-04-09T21:16:15,016 creating build/lib/galaxy/model/dataset_collections/types 2026-04-09T21:16:15,017 copying galaxy/model/dataset_collections/types/list.py -> build/lib/galaxy/model/dataset_collections/types 2026-04-09T21:16:15,019 copying galaxy/model/dataset_collections/types/record.py -> build/lib/galaxy/model/dataset_collections/types 2026-04-09T21:16:15,021 copying galaxy/model/dataset_collections/types/__init__.py -> build/lib/galaxy/model/dataset_collections/types 2026-04-09T21:16:15,023 copying galaxy/model/dataset_collections/types/paired_or_unpaired.py -> build/lib/galaxy/model/dataset_collections/types 2026-04-09T21:16:15,025 copying galaxy/model/dataset_collections/types/semantics.py -> build/lib/galaxy/model/dataset_collections/types 2026-04-09T21:16:15,028 copying galaxy/model/dataset_collections/types/sample_sheet_util.py -> build/lib/galaxy/model/dataset_collections/types 2026-04-09T21:16:15,030 copying galaxy/model/dataset_collections/types/paired.py -> build/lib/galaxy/model/dataset_collections/types 2026-04-09T21:16:15,032 copying galaxy/model/dataset_collections/types/sample_sheet_workbook.py -> build/lib/galaxy/model/dataset_collections/types 2026-04-09T21:16:15,035 copying galaxy/model/dataset_collections/types/sample_sheet.py -> build/lib/galaxy/model/dataset_collections/types 2026-04-09T21:16:15,038 creating build/lib/galaxy/datatypes/display_applications 2026-04-09T21:16:15,039 copying galaxy/datatypes/display_applications/__init__.py -> build/lib/galaxy/datatypes/display_applications 2026-04-09T21:16:15,041 copying galaxy/datatypes/display_applications/util.py -> build/lib/galaxy/datatypes/display_applications 2026-04-09T21:16:15,043 copying galaxy/datatypes/display_applications/application.py -> build/lib/galaxy/datatypes/display_applications 2026-04-09T21:16:15,047 copying galaxy/datatypes/display_applications/parameters.py -> build/lib/galaxy/datatypes/display_applications 2026-04-09T21:16:15,050 creating build/lib/galaxy/datatypes/util 2026-04-09T21:16:15,051 copying galaxy/datatypes/util/gff_util.py -> build/lib/galaxy/datatypes/util 2026-04-09T21:16:15,054 copying galaxy/datatypes/util/__init__.py -> build/lib/galaxy/datatypes/util 2026-04-09T21:16:15,056 copying galaxy/datatypes/util/maf_utilities.py -> build/lib/galaxy/datatypes/util 2026-04-09T21:16:15,059 copying galaxy/datatypes/util/generic_util.py -> build/lib/galaxy/datatypes/util 2026-04-09T21:16:15,062 creating build/lib/galaxy/datatypes/dataproviders 2026-04-09T21:16:15,063 copying galaxy/datatypes/dataproviders/__init__.py -> build/lib/galaxy/datatypes/dataproviders 2026-04-09T21:16:15,065 copying galaxy/datatypes/dataproviders/exceptions.py -> build/lib/galaxy/datatypes/dataproviders 2026-04-09T21:16:15,067 copying galaxy/datatypes/dataproviders/decorators.py -> build/lib/galaxy/datatypes/dataproviders 2026-04-09T21:16:15,070 copying galaxy/datatypes/dataproviders/dataset.py -> build/lib/galaxy/datatypes/dataproviders 2026-04-09T21:16:15,073 copying galaxy/datatypes/dataproviders/external.py -> build/lib/galaxy/datatypes/dataproviders 2026-04-09T21:16:15,075 copying galaxy/datatypes/dataproviders/column.py -> build/lib/galaxy/datatypes/dataproviders 2026-04-09T21:16:15,078 copying galaxy/datatypes/dataproviders/hierarchy.py -> build/lib/galaxy/datatypes/dataproviders 2026-04-09T21:16:15,081 copying galaxy/datatypes/dataproviders/base.py -> build/lib/galaxy/datatypes/dataproviders 2026-04-09T21:16:15,083 copying galaxy/datatypes/dataproviders/line.py -> build/lib/galaxy/datatypes/dataproviders 2026-04-09T21:16:15,085 copying galaxy/datatypes/dataproviders/chunk.py -> build/lib/galaxy/datatypes/dataproviders 2026-04-09T21:16:15,088 creating build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,089 copying galaxy/datatypes/converters/pbed_ldreduced_converter.py -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,092 copying galaxy/datatypes/converters/wiggle_to_simple_converter.py -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,094 copying galaxy/datatypes/converters/__init__.py -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,095 copying galaxy/datatypes/converters/vcf_to_interval_index_converter.py -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,097 copying galaxy/datatypes/converters/lped_to_fped_converter.py -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,099 copying galaxy/datatypes/converters/picard_interval_list_to_bed6_converter.py -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,101 copying galaxy/datatypes/converters/ref_to_seq_taxonomy_converter.py -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,103 copying galaxy/datatypes/converters/interval_to_interval_index_converter.py -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,105 copying galaxy/datatypes/converters/pbed_to_lped_converter.py -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,107 copying galaxy/datatypes/converters/bed_to_gff_converter.py -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,109 copying galaxy/datatypes/converters/fastqsolexa_to_fasta_converter.py -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,111 copying galaxy/datatypes/converters/interval_to_bed_converter.py -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,113 copying galaxy/datatypes/converters/maf_to_interval_converter.py -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,115 copying galaxy/datatypes/converters/gff_to_interval_index_converter.py -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,117 copying galaxy/datatypes/converters/gff_to_bed_converter.py -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,119 copying galaxy/datatypes/converters/parquet_to_csv_converter.py -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,121 copying galaxy/datatypes/converters/lped_to_pbed_converter.py -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,123 copying galaxy/datatypes/converters/maf_to_fasta_converter.py -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,125 copying galaxy/datatypes/converters/interval_to_fli.py -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,127 copying galaxy/datatypes/converters/pileup_to_interval_index_converter.py -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,129 copying galaxy/datatypes/converters/tabular_csv.py -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,131 copying galaxy/datatypes/converters/fastqsolexa_to_qual_converter.py -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,133 copying galaxy/datatypes/converters/interval_to_bedstrict_converter.py -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,136 copying galaxy/datatypes/converters/fasta_to_len.py -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,138 copying galaxy/datatypes/converters/fastq_to_fqtoc.py -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,140 copying galaxy/datatypes/converters/fasta_to_tabular_converter.py -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,141 running egg_info 2026-04-09T21:16:15,151 writing galaxy_data.egg-info/PKG-INFO 2026-04-09T21:16:15,160 writing dependency_links to galaxy_data.egg-info/dependency_links.txt 2026-04-09T21:16:15,162 writing requirements to galaxy_data.egg-info/requires.txt 2026-04-09T21:16:15,163 writing top-level names to galaxy_data.egg-info/top_level.txt 2026-04-09T21:16:15,193 reading manifest file 'galaxy_data.egg-info/SOURCES.txt' 2026-04-09T21:16:15,214 reading manifest template 'MANIFEST.in' 2026-04-09T21:16:15,253 adding license file 'LICENSE' 2026-04-09T21:16:15,273 writing manifest file 'galaxy_data.egg-info/SOURCES.txt' 2026-04-09T21:16:15,277 /tmp/pip-build-env-b_w4ptr1/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'galaxy.datatypes.display_applications.configs.biom' is absent from the `packages` configuration. 2026-04-09T21:16:15,278 !! 2026-04-09T21:16:15,279 ******************************************************************************** 2026-04-09T21:16:15,279 ############################ 2026-04-09T21:16:15,280 # Package would be ignored # 2026-04-09T21:16:15,280 ############################ 2026-04-09T21:16:15,281 Python recognizes 'galaxy.datatypes.display_applications.configs.biom' as an importable package[^1], 2026-04-09T21:16:15,281 but it is absent from setuptools' `packages` configuration. 2026-04-09T21:16:15,282 This leads to an ambiguous overall configuration. If you want to distribute this 2026-04-09T21:16:15,283 package, please make sure that 'galaxy.datatypes.display_applications.configs.biom' is explicitly added 2026-04-09T21:16:15,283 to the `packages` configuration field. 2026-04-09T21:16:15,284 Alternatively, you can also rely on setuptools' discovery methods 2026-04-09T21:16:15,285 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-04-09T21:16:15,286 instead of `find_packages(...)`/`find:`). 2026-04-09T21:16:15,287 You can read more about "package discovery" on setuptools documentation page: 2026-04-09T21:16:15,288 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-04-09T21:16:15,289 If you don't want 'galaxy.datatypes.display_applications.configs.biom' to be distributed and are 2026-04-09T21:16:15,290 already explicitly excluding 'galaxy.datatypes.display_applications.configs.biom' via 2026-04-09T21:16:15,290 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-04-09T21:16:15,291 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-04-09T21:16:15,291 combination with a more fine grained `package-data` configuration. 2026-04-09T21:16:15,293 You can read more about "package data files" on setuptools documentation page: 2026-04-09T21:16:15,294 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-04-09T21:16:15,296 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-04-09T21:16:15,296 even if it does not contain any `.py` files. 2026-04-09T21:16:15,297 On the other hand, currently there is no concept of package data 2026-04-09T21:16:15,298 directory, all directories are treated like packages. 2026-04-09T21:16:15,298 ******************************************************************************** 2026-04-09T21:16:15,299 !! 2026-04-09T21:16:15,300 check.warn(importable) 2026-04-09T21:16:15,301 /tmp/pip-build-env-b_w4ptr1/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'galaxy.datatypes.display_applications.configs.ensembl' is absent from the `packages` configuration. 2026-04-09T21:16:15,301 !! 2026-04-09T21:16:15,302 ******************************************************************************** 2026-04-09T21:16:15,303 ############################ 2026-04-09T21:16:15,304 # Package would be ignored # 2026-04-09T21:16:15,305 ############################ 2026-04-09T21:16:15,305 Python recognizes 'galaxy.datatypes.display_applications.configs.ensembl' as an importable package[^1], 2026-04-09T21:16:15,306 but it is absent from setuptools' `packages` configuration. 2026-04-09T21:16:15,307 This leads to an ambiguous overall configuration. If you want to distribute this 2026-04-09T21:16:15,307 package, please make sure that 'galaxy.datatypes.display_applications.configs.ensembl' is explicitly added 2026-04-09T21:16:15,307 to the `packages` configuration field. 2026-04-09T21:16:15,308 Alternatively, you can also rely on setuptools' discovery methods 2026-04-09T21:16:15,309 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-04-09T21:16:15,309 instead of `find_packages(...)`/`find:`). 2026-04-09T21:16:15,310 You can read more about "package discovery" on setuptools documentation page: 2026-04-09T21:16:15,311 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-04-09T21:16:15,312 If you don't want 'galaxy.datatypes.display_applications.configs.ensembl' to be distributed and are 2026-04-09T21:16:15,312 already explicitly excluding 'galaxy.datatypes.display_applications.configs.ensembl' via 2026-04-09T21:16:15,313 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-04-09T21:16:15,313 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-04-09T21:16:15,314 combination with a more fine grained `package-data` configuration. 2026-04-09T21:16:15,314 You can read more about "package data files" on setuptools documentation page: 2026-04-09T21:16:15,315 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-04-09T21:16:15,317 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-04-09T21:16:15,318 even if it does not contain any `.py` files. 2026-04-09T21:16:15,318 On the other hand, currently there is no concept of package data 2026-04-09T21:16:15,318 directory, all directories are treated like packages. 2026-04-09T21:16:15,319 ******************************************************************************** 2026-04-09T21:16:15,320 !! 2026-04-09T21:16:15,321 check.warn(importable) 2026-04-09T21:16:15,321 /tmp/pip-build-env-b_w4ptr1/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'galaxy.datatypes.display_applications.configs.gbrowse' is absent from the `packages` configuration. 2026-04-09T21:16:15,322 !! 2026-04-09T21:16:15,323 ******************************************************************************** 2026-04-09T21:16:15,323 ############################ 2026-04-09T21:16:15,324 # Package would be ignored # 2026-04-09T21:16:15,325 ############################ 2026-04-09T21:16:15,325 Python recognizes 'galaxy.datatypes.display_applications.configs.gbrowse' as an importable package[^1], 2026-04-09T21:16:15,326 but it is absent from setuptools' `packages` configuration. 2026-04-09T21:16:15,327 This leads to an ambiguous overall configuration. If you want to distribute this 2026-04-09T21:16:15,327 package, please make sure that 'galaxy.datatypes.display_applications.configs.gbrowse' is explicitly added 2026-04-09T21:16:15,328 to the `packages` configuration field. 2026-04-09T21:16:15,329 Alternatively, you can also rely on setuptools' discovery methods 2026-04-09T21:16:15,329 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-04-09T21:16:15,330 instead of `find_packages(...)`/`find:`). 2026-04-09T21:16:15,331 You can read more about "package discovery" on setuptools documentation page: 2026-04-09T21:16:15,332 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-04-09T21:16:15,333 If you don't want 'galaxy.datatypes.display_applications.configs.gbrowse' to be distributed and are 2026-04-09T21:16:15,334 already explicitly excluding 'galaxy.datatypes.display_applications.configs.gbrowse' via 2026-04-09T21:16:15,334 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-04-09T21:16:15,335 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-04-09T21:16:15,335 combination with a more fine grained `package-data` configuration. 2026-04-09T21:16:15,336 You can read more about "package data files" on setuptools documentation page: 2026-04-09T21:16:15,337 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-04-09T21:16:15,339 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-04-09T21:16:15,339 even if it does not contain any `.py` files. 2026-04-09T21:16:15,339 On the other hand, currently there is no concept of package data 2026-04-09T21:16:15,340 directory, all directories are treated like packages. 2026-04-09T21:16:15,341 ******************************************************************************** 2026-04-09T21:16:15,342 !! 2026-04-09T21:16:15,342 check.warn(importable) 2026-04-09T21:16:15,343 /tmp/pip-build-env-b_w4ptr1/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'galaxy.datatypes.display_applications.configs.icn3d' is absent from the `packages` configuration. 2026-04-09T21:16:15,343 !! 2026-04-09T21:16:15,344 ******************************************************************************** 2026-04-09T21:16:15,345 ############################ 2026-04-09T21:16:15,345 # Package would be ignored # 2026-04-09T21:16:15,346 ############################ 2026-04-09T21:16:15,346 Python recognizes 'galaxy.datatypes.display_applications.configs.icn3d' as an importable package[^1], 2026-04-09T21:16:15,347 but it is absent from setuptools' `packages` configuration. 2026-04-09T21:16:15,348 This leads to an ambiguous overall configuration. If you want to distribute this 2026-04-09T21:16:15,348 package, please make sure that 'galaxy.datatypes.display_applications.configs.icn3d' is explicitly added 2026-04-09T21:16:15,349 to the `packages` configuration field. 2026-04-09T21:16:15,350 Alternatively, you can also rely on setuptools' discovery methods 2026-04-09T21:16:15,350 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-04-09T21:16:15,351 instead of `find_packages(...)`/`find:`). 2026-04-09T21:16:15,352 You can read more about "package discovery" on setuptools documentation page: 2026-04-09T21:16:15,353 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-04-09T21:16:15,354 If you don't want 'galaxy.datatypes.display_applications.configs.icn3d' to be distributed and are 2026-04-09T21:16:15,355 already explicitly excluding 'galaxy.datatypes.display_applications.configs.icn3d' via 2026-04-09T21:16:15,355 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-04-09T21:16:15,356 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-04-09T21:16:15,357 combination with a more fine grained `package-data` configuration. 2026-04-09T21:16:15,358 You can read more about "package data files" on setuptools documentation page: 2026-04-09T21:16:15,359 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-04-09T21:16:15,361 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-04-09T21:16:15,361 even if it does not contain any `.py` files. 2026-04-09T21:16:15,362 On the other hand, currently there is no concept of package data 2026-04-09T21:16:15,363 directory, all directories are treated like packages. 2026-04-09T21:16:15,363 ******************************************************************************** 2026-04-09T21:16:15,364 !! 2026-04-09T21:16:15,364 check.warn(importable) 2026-04-09T21:16:15,365 /tmp/pip-build-env-b_w4ptr1/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'galaxy.datatypes.display_applications.configs.igb' is absent from the `packages` configuration. 2026-04-09T21:16:15,365 !! 2026-04-09T21:16:15,366 ******************************************************************************** 2026-04-09T21:16:15,367 ############################ 2026-04-09T21:16:15,367 # Package would be ignored # 2026-04-09T21:16:15,368 ############################ 2026-04-09T21:16:15,368 Python recognizes 'galaxy.datatypes.display_applications.configs.igb' as an importable package[^1], 2026-04-09T21:16:15,369 but it is absent from setuptools' `packages` configuration. 2026-04-09T21:16:15,370 This leads to an ambiguous overall configuration. If you want to distribute this 2026-04-09T21:16:15,370 package, please make sure that 'galaxy.datatypes.display_applications.configs.igb' is explicitly added 2026-04-09T21:16:15,371 to the `packages` configuration field. 2026-04-09T21:16:15,372 Alternatively, you can also rely on setuptools' discovery methods 2026-04-09T21:16:15,372 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-04-09T21:16:15,373 instead of `find_packages(...)`/`find:`). 2026-04-09T21:16:15,374 You can read more about "package discovery" on setuptools documentation page: 2026-04-09T21:16:15,376 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-04-09T21:16:15,377 If you don't want 'galaxy.datatypes.display_applications.configs.igb' to be distributed and are 2026-04-09T21:16:15,378 already explicitly excluding 'galaxy.datatypes.display_applications.configs.igb' via 2026-04-09T21:16:15,379 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-04-09T21:16:15,380 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-04-09T21:16:15,380 combination with a more fine grained `package-data` configuration. 2026-04-09T21:16:15,382 You can read more about "package data files" on setuptools documentation page: 2026-04-09T21:16:15,384 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-04-09T21:16:15,386 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-04-09T21:16:15,386 even if it does not contain any `.py` files. 2026-04-09T21:16:15,387 On the other hand, currently there is no concept of package data 2026-04-09T21:16:15,387 directory, all directories are treated like packages. 2026-04-09T21:16:15,388 ******************************************************************************** 2026-04-09T21:16:15,389 !! 2026-04-09T21:16:15,390 check.warn(importable) 2026-04-09T21:16:15,390 /tmp/pip-build-env-b_w4ptr1/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'galaxy.datatypes.display_applications.configs.igv' is absent from the `packages` configuration. 2026-04-09T21:16:15,391 !! 2026-04-09T21:16:15,392 ******************************************************************************** 2026-04-09T21:16:15,393 ############################ 2026-04-09T21:16:15,393 # Package would be ignored # 2026-04-09T21:16:15,394 ############################ 2026-04-09T21:16:15,395 Python recognizes 'galaxy.datatypes.display_applications.configs.igv' as an importable package[^1], 2026-04-09T21:16:15,396 but it is absent from setuptools' `packages` configuration. 2026-04-09T21:16:15,398 This leads to an ambiguous overall configuration. If you want to distribute this 2026-04-09T21:16:15,398 package, please make sure that 'galaxy.datatypes.display_applications.configs.igv' is explicitly added 2026-04-09T21:16:15,399 to the `packages` configuration field. 2026-04-09T21:16:15,400 Alternatively, you can also rely on setuptools' discovery methods 2026-04-09T21:16:15,401 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-04-09T21:16:15,402 instead of `find_packages(...)`/`find:`). 2026-04-09T21:16:15,403 You can read more about "package discovery" on setuptools documentation page: 2026-04-09T21:16:15,404 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-04-09T21:16:15,406 If you don't want 'galaxy.datatypes.display_applications.configs.igv' to be distributed and are 2026-04-09T21:16:15,407 already explicitly excluding 'galaxy.datatypes.display_applications.configs.igv' via 2026-04-09T21:16:15,407 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-04-09T21:16:15,408 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-04-09T21:16:15,408 combination with a more fine grained `package-data` configuration. 2026-04-09T21:16:15,409 You can read more about "package data files" on setuptools documentation page: 2026-04-09T21:16:15,410 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-04-09T21:16:15,412 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-04-09T21:16:15,413 even if it does not contain any `.py` files. 2026-04-09T21:16:15,413 On the other hand, currently there is no concept of package data 2026-04-09T21:16:15,414 directory, all directories are treated like packages. 2026-04-09T21:16:15,414 ******************************************************************************** 2026-04-09T21:16:15,415 !! 2026-04-09T21:16:15,415 check.warn(importable) 2026-04-09T21:16:15,416 /tmp/pip-build-env-b_w4ptr1/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'galaxy.datatypes.display_applications.configs.image' is absent from the `packages` configuration. 2026-04-09T21:16:15,416 !! 2026-04-09T21:16:15,417 ******************************************************************************** 2026-04-09T21:16:15,418 ############################ 2026-04-09T21:16:15,418 # Package would be ignored # 2026-04-09T21:16:15,419 ############################ 2026-04-09T21:16:15,419 Python recognizes 'galaxy.datatypes.display_applications.configs.image' as an importable package[^1], 2026-04-09T21:16:15,420 but it is absent from setuptools' `packages` configuration. 2026-04-09T21:16:15,421 This leads to an ambiguous overall configuration. If you want to distribute this 2026-04-09T21:16:15,422 package, please make sure that 'galaxy.datatypes.display_applications.configs.image' is explicitly added 2026-04-09T21:16:15,422 to the `packages` configuration field. 2026-04-09T21:16:15,424 Alternatively, you can also rely on setuptools' discovery methods 2026-04-09T21:16:15,424 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-04-09T21:16:15,425 instead of `find_packages(...)`/`find:`). 2026-04-09T21:16:15,426 You can read more about "package discovery" on setuptools documentation page: 2026-04-09T21:16:15,427 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-04-09T21:16:15,428 If you don't want 'galaxy.datatypes.display_applications.configs.image' to be distributed and are 2026-04-09T21:16:15,428 already explicitly excluding 'galaxy.datatypes.display_applications.configs.image' via 2026-04-09T21:16:15,429 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-04-09T21:16:15,430 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-04-09T21:16:15,430 combination with a more fine grained `package-data` configuration. 2026-04-09T21:16:15,431 You can read more about "package data files" on setuptools documentation page: 2026-04-09T21:16:15,432 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-04-09T21:16:15,433 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-04-09T21:16:15,434 even if it does not contain any `.py` files. 2026-04-09T21:16:15,434 On the other hand, currently there is no concept of package data 2026-04-09T21:16:15,435 directory, all directories are treated like packages. 2026-04-09T21:16:15,435 ******************************************************************************** 2026-04-09T21:16:15,436 !! 2026-04-09T21:16:15,437 check.warn(importable) 2026-04-09T21:16:15,437 /tmp/pip-build-env-b_w4ptr1/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'galaxy.datatypes.display_applications.configs.intermine' is absent from the `packages` configuration. 2026-04-09T21:16:15,438 !! 2026-04-09T21:16:15,439 ******************************************************************************** 2026-04-09T21:16:15,439 ############################ 2026-04-09T21:16:15,440 # Package would be ignored # 2026-04-09T21:16:15,440 ############################ 2026-04-09T21:16:15,441 Python recognizes 'galaxy.datatypes.display_applications.configs.intermine' as an importable package[^1], 2026-04-09T21:16:15,441 but it is absent from setuptools' `packages` configuration. 2026-04-09T21:16:15,442 This leads to an ambiguous overall configuration. If you want to distribute this 2026-04-09T21:16:15,443 package, please make sure that 'galaxy.datatypes.display_applications.configs.intermine' is explicitly added 2026-04-09T21:16:15,443 to the `packages` configuration field. 2026-04-09T21:16:15,445 Alternatively, you can also rely on setuptools' discovery methods 2026-04-09T21:16:15,445 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-04-09T21:16:15,446 instead of `find_packages(...)`/`find:`). 2026-04-09T21:16:15,447 You can read more about "package discovery" on setuptools documentation page: 2026-04-09T21:16:15,448 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-04-09T21:16:15,449 If you don't want 'galaxy.datatypes.display_applications.configs.intermine' to be distributed and are 2026-04-09T21:16:15,449 already explicitly excluding 'galaxy.datatypes.display_applications.configs.intermine' via 2026-04-09T21:16:15,450 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-04-09T21:16:15,450 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-04-09T21:16:15,451 combination with a more fine grained `package-data` configuration. 2026-04-09T21:16:15,452 You can read more about "package data files" on setuptools documentation page: 2026-04-09T21:16:15,453 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-04-09T21:16:15,455 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-04-09T21:16:15,455 even if it does not contain any `.py` files. 2026-04-09T21:16:15,456 On the other hand, currently there is no concept of package data 2026-04-09T21:16:15,456 directory, all directories are treated like packages. 2026-04-09T21:16:15,457 ******************************************************************************** 2026-04-09T21:16:15,458 !! 2026-04-09T21:16:15,458 check.warn(importable) 2026-04-09T21:16:15,459 /tmp/pip-build-env-b_w4ptr1/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'galaxy.datatypes.display_applications.configs.iobio' is absent from the `packages` configuration. 2026-04-09T21:16:15,459 !! 2026-04-09T21:16:15,460 ******************************************************************************** 2026-04-09T21:16:15,460 ############################ 2026-04-09T21:16:15,461 # Package would be ignored # 2026-04-09T21:16:15,461 ############################ 2026-04-09T21:16:15,461 Python recognizes 'galaxy.datatypes.display_applications.configs.iobio' as an importable package[^1], 2026-04-09T21:16:15,462 but it is absent from setuptools' `packages` configuration. 2026-04-09T21:16:15,463 This leads to an ambiguous overall configuration. If you want to distribute this 2026-04-09T21:16:15,463 package, please make sure that 'galaxy.datatypes.display_applications.configs.iobio' is explicitly added 2026-04-09T21:16:15,464 to the `packages` configuration field. 2026-04-09T21:16:15,465 Alternatively, you can also rely on setuptools' discovery methods 2026-04-09T21:16:15,465 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-04-09T21:16:15,466 instead of `find_packages(...)`/`find:`). 2026-04-09T21:16:15,466 You can read more about "package discovery" on setuptools documentation page: 2026-04-09T21:16:15,467 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-04-09T21:16:15,468 If you don't want 'galaxy.datatypes.display_applications.configs.iobio' to be distributed and are 2026-04-09T21:16:15,469 already explicitly excluding 'galaxy.datatypes.display_applications.configs.iobio' via 2026-04-09T21:16:15,469 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-04-09T21:16:15,470 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-04-09T21:16:15,470 combination with a more fine grained `package-data` configuration. 2026-04-09T21:16:15,472 You can read more about "package data files" on setuptools documentation page: 2026-04-09T21:16:15,473 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-04-09T21:16:15,474 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-04-09T21:16:15,475 even if it does not contain any `.py` files. 2026-04-09T21:16:15,475 On the other hand, currently there is no concept of package data 2026-04-09T21:16:15,476 directory, all directories are treated like packages. 2026-04-09T21:16:15,477 ******************************************************************************** 2026-04-09T21:16:15,478 !! 2026-04-09T21:16:15,478 check.warn(importable) 2026-04-09T21:16:15,479 /tmp/pip-build-env-b_w4ptr1/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'galaxy.datatypes.display_applications.configs.minerva' is absent from the `packages` configuration. 2026-04-09T21:16:15,480 !! 2026-04-09T21:16:15,481 ******************************************************************************** 2026-04-09T21:16:15,482 ############################ 2026-04-09T21:16:15,482 # Package would be ignored # 2026-04-09T21:16:15,483 ############################ 2026-04-09T21:16:15,484 Python recognizes 'galaxy.datatypes.display_applications.configs.minerva' as an importable package[^1], 2026-04-09T21:16:15,484 but it is absent from setuptools' `packages` configuration. 2026-04-09T21:16:15,485 This leads to an ambiguous overall configuration. If you want to distribute this 2026-04-09T21:16:15,486 package, please make sure that 'galaxy.datatypes.display_applications.configs.minerva' is explicitly added 2026-04-09T21:16:15,486 to the `packages` configuration field. 2026-04-09T21:16:15,487 Alternatively, you can also rely on setuptools' discovery methods 2026-04-09T21:16:15,487 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-04-09T21:16:15,488 instead of `find_packages(...)`/`find:`). 2026-04-09T21:16:15,489 You can read more about "package discovery" on setuptools documentation page: 2026-04-09T21:16:15,489 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-04-09T21:16:15,490 If you don't want 'galaxy.datatypes.display_applications.configs.minerva' to be distributed and are 2026-04-09T21:16:15,491 already explicitly excluding 'galaxy.datatypes.display_applications.configs.minerva' via 2026-04-09T21:16:15,491 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-04-09T21:16:15,492 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-04-09T21:16:15,492 combination with a more fine grained `package-data` configuration. 2026-04-09T21:16:15,493 You can read more about "package data files" on setuptools documentation page: 2026-04-09T21:16:15,494 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-04-09T21:16:15,496 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-04-09T21:16:15,496 even if it does not contain any `.py` files. 2026-04-09T21:16:15,497 On the other hand, currently there is no concept of package data 2026-04-09T21:16:15,497 directory, all directories are treated like packages. 2026-04-09T21:16:15,498 ******************************************************************************** 2026-04-09T21:16:15,499 !! 2026-04-09T21:16:15,499 check.warn(importable) 2026-04-09T21:16:15,500 /tmp/pip-build-env-b_w4ptr1/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'galaxy.datatypes.display_applications.configs.qiime.qiime2' is absent from the `packages` configuration. 2026-04-09T21:16:15,500 !! 2026-04-09T21:16:15,501 ******************************************************************************** 2026-04-09T21:16:15,502 ############################ 2026-04-09T21:16:15,503 # Package would be ignored # 2026-04-09T21:16:15,503 ############################ 2026-04-09T21:16:15,504 Python recognizes 'galaxy.datatypes.display_applications.configs.qiime.qiime2' as an importable package[^1], 2026-04-09T21:16:15,504 but it is absent from setuptools' `packages` configuration. 2026-04-09T21:16:15,505 This leads to an ambiguous overall configuration. If you want to distribute this 2026-04-09T21:16:15,506 package, please make sure that 'galaxy.datatypes.display_applications.configs.qiime.qiime2' is explicitly added 2026-04-09T21:16:15,506 to the `packages` configuration field. 2026-04-09T21:16:15,507 Alternatively, you can also rely on setuptools' discovery methods 2026-04-09T21:16:15,508 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-04-09T21:16:15,508 instead of `find_packages(...)`/`find:`). 2026-04-09T21:16:15,509 You can read more about "package discovery" on setuptools documentation page: 2026-04-09T21:16:15,510 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-04-09T21:16:15,511 If you don't want 'galaxy.datatypes.display_applications.configs.qiime.qiime2' to be distributed and are 2026-04-09T21:16:15,512 already explicitly excluding 'galaxy.datatypes.display_applications.configs.qiime.qiime2' via 2026-04-09T21:16:15,513 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-04-09T21:16:15,514 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-04-09T21:16:15,514 combination with a more fine grained `package-data` configuration. 2026-04-09T21:16:15,515 You can read more about "package data files" on setuptools documentation page: 2026-04-09T21:16:15,516 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-04-09T21:16:15,517 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-04-09T21:16:15,518 even if it does not contain any `.py` files. 2026-04-09T21:16:15,518 On the other hand, currently there is no concept of package data 2026-04-09T21:16:15,519 directory, all directories are treated like packages. 2026-04-09T21:16:15,519 ******************************************************************************** 2026-04-09T21:16:15,520 !! 2026-04-09T21:16:15,521 check.warn(importable) 2026-04-09T21:16:15,522 /tmp/pip-build-env-b_w4ptr1/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'galaxy.datatypes.display_applications.configs.rviewer' is absent from the `packages` configuration. 2026-04-09T21:16:15,522 !! 2026-04-09T21:16:15,523 ******************************************************************************** 2026-04-09T21:16:15,524 ############################ 2026-04-09T21:16:15,524 # Package would be ignored # 2026-04-09T21:16:15,525 ############################ 2026-04-09T21:16:15,526 Python recognizes 'galaxy.datatypes.display_applications.configs.rviewer' as an importable package[^1], 2026-04-09T21:16:15,526 but it is absent from setuptools' `packages` configuration. 2026-04-09T21:16:15,527 This leads to an ambiguous overall configuration. If you want to distribute this 2026-04-09T21:16:15,527 package, please make sure that 'galaxy.datatypes.display_applications.configs.rviewer' is explicitly added 2026-04-09T21:16:15,528 to the `packages` configuration field. 2026-04-09T21:16:15,529 Alternatively, you can also rely on setuptools' discovery methods 2026-04-09T21:16:15,529 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-04-09T21:16:15,530 instead of `find_packages(...)`/`find:`). 2026-04-09T21:16:15,531 You can read more about "package discovery" on setuptools documentation page: 2026-04-09T21:16:15,532 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-04-09T21:16:15,533 If you don't want 'galaxy.datatypes.display_applications.configs.rviewer' to be distributed and are 2026-04-09T21:16:15,534 already explicitly excluding 'galaxy.datatypes.display_applications.configs.rviewer' via 2026-04-09T21:16:15,534 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-04-09T21:16:15,535 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-04-09T21:16:15,536 combination with a more fine grained `package-data` configuration. 2026-04-09T21:16:15,537 You can read more about "package data files" on setuptools documentation page: 2026-04-09T21:16:15,538 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-04-09T21:16:15,539 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-04-09T21:16:15,540 even if it does not contain any `.py` files. 2026-04-09T21:16:15,540 On the other hand, currently there is no concept of package data 2026-04-09T21:16:15,541 directory, all directories are treated like packages. 2026-04-09T21:16:15,542 ******************************************************************************** 2026-04-09T21:16:15,543 !! 2026-04-09T21:16:15,544 check.warn(importable) 2026-04-09T21:16:15,544 /tmp/pip-build-env-b_w4ptr1/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'galaxy.datatypes.display_applications.configs.ucsc' is absent from the `packages` configuration. 2026-04-09T21:16:15,544 !! 2026-04-09T21:16:15,545 ******************************************************************************** 2026-04-09T21:16:15,546 ############################ 2026-04-09T21:16:15,546 # Package would be ignored # 2026-04-09T21:16:15,546 ############################ 2026-04-09T21:16:15,547 Python recognizes 'galaxy.datatypes.display_applications.configs.ucsc' as an importable package[^1], 2026-04-09T21:16:15,547 but it is absent from setuptools' `packages` configuration. 2026-04-09T21:16:15,548 This leads to an ambiguous overall configuration. If you want to distribute this 2026-04-09T21:16:15,549 package, please make sure that 'galaxy.datatypes.display_applications.configs.ucsc' is explicitly added 2026-04-09T21:16:15,549 to the `packages` configuration field. 2026-04-09T21:16:15,550 Alternatively, you can also rely on setuptools' discovery methods 2026-04-09T21:16:15,550 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-04-09T21:16:15,551 instead of `find_packages(...)`/`find:`). 2026-04-09T21:16:15,552 You can read more about "package discovery" on setuptools documentation page: 2026-04-09T21:16:15,553 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-04-09T21:16:15,554 If you don't want 'galaxy.datatypes.display_applications.configs.ucsc' to be distributed and are 2026-04-09T21:16:15,554 already explicitly excluding 'galaxy.datatypes.display_applications.configs.ucsc' via 2026-04-09T21:16:15,555 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-04-09T21:16:15,555 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-04-09T21:16:15,556 combination with a more fine grained `package-data` configuration. 2026-04-09T21:16:15,557 You can read more about "package data files" on setuptools documentation page: 2026-04-09T21:16:15,558 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-04-09T21:16:15,559 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-04-09T21:16:15,560 even if it does not contain any `.py` files. 2026-04-09T21:16:15,561 On the other hand, currently there is no concept of package data 2026-04-09T21:16:15,561 directory, all directories are treated like packages. 2026-04-09T21:16:15,562 ******************************************************************************** 2026-04-09T21:16:15,563 !! 2026-04-09T21:16:15,564 check.warn(importable) 2026-04-09T21:16:15,564 /tmp/pip-build-env-b_w4ptr1/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'galaxy.datatypes.display_applications.xsd' is absent from the `packages` configuration. 2026-04-09T21:16:15,565 !! 2026-04-09T21:16:15,566 ******************************************************************************** 2026-04-09T21:16:15,567 ############################ 2026-04-09T21:16:15,567 # Package would be ignored # 2026-04-09T21:16:15,568 ############################ 2026-04-09T21:16:15,569 Python recognizes 'galaxy.datatypes.display_applications.xsd' as an importable package[^1], 2026-04-09T21:16:15,569 but it is absent from setuptools' `packages` configuration. 2026-04-09T21:16:15,571 This leads to an ambiguous overall configuration. If you want to distribute this 2026-04-09T21:16:15,571 package, please make sure that 'galaxy.datatypes.display_applications.xsd' is explicitly added 2026-04-09T21:16:15,572 to the `packages` configuration field. 2026-04-09T21:16:15,573 Alternatively, you can also rely on setuptools' discovery methods 2026-04-09T21:16:15,573 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-04-09T21:16:15,573 instead of `find_packages(...)`/`find:`). 2026-04-09T21:16:15,575 You can read more about "package discovery" on setuptools documentation page: 2026-04-09T21:16:15,575 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-04-09T21:16:15,576 If you don't want 'galaxy.datatypes.display_applications.xsd' to be distributed and are 2026-04-09T21:16:15,577 already explicitly excluding 'galaxy.datatypes.display_applications.xsd' via 2026-04-09T21:16:15,577 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-04-09T21:16:15,578 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-04-09T21:16:15,578 combination with a more fine grained `package-data` configuration. 2026-04-09T21:16:15,580 You can read more about "package data files" on setuptools documentation page: 2026-04-09T21:16:15,581 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-04-09T21:16:15,582 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-04-09T21:16:15,583 even if it does not contain any `.py` files. 2026-04-09T21:16:15,583 On the other hand, currently there is no concept of package data 2026-04-09T21:16:15,584 directory, all directories are treated like packages. 2026-04-09T21:16:15,584 ******************************************************************************** 2026-04-09T21:16:15,585 !! 2026-04-09T21:16:15,586 check.warn(importable) 2026-04-09T21:16:15,587 /tmp/pip-build-env-b_w4ptr1/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'galaxy.model.migrations.alembic' is absent from the `packages` configuration. 2026-04-09T21:16:15,587 !! 2026-04-09T21:16:15,588 ******************************************************************************** 2026-04-09T21:16:15,589 ############################ 2026-04-09T21:16:15,590 # Package would be ignored # 2026-04-09T21:16:15,590 ############################ 2026-04-09T21:16:15,591 Python recognizes 'galaxy.model.migrations.alembic' as an importable package[^1], 2026-04-09T21:16:15,592 but it is absent from setuptools' `packages` configuration. 2026-04-09T21:16:15,592 This leads to an ambiguous overall configuration. If you want to distribute this 2026-04-09T21:16:15,593 package, please make sure that 'galaxy.model.migrations.alembic' is explicitly added 2026-04-09T21:16:15,594 to the `packages` configuration field. 2026-04-09T21:16:15,595 Alternatively, you can also rely on setuptools' discovery methods 2026-04-09T21:16:15,595 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-04-09T21:16:15,596 instead of `find_packages(...)`/`find:`). 2026-04-09T21:16:15,597 You can read more about "package discovery" on setuptools documentation page: 2026-04-09T21:16:15,598 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-04-09T21:16:15,599 If you don't want 'galaxy.model.migrations.alembic' to be distributed and are 2026-04-09T21:16:15,600 already explicitly excluding 'galaxy.model.migrations.alembic' via 2026-04-09T21:16:15,600 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-04-09T21:16:15,601 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-04-09T21:16:15,601 combination with a more fine grained `package-data` configuration. 2026-04-09T21:16:15,603 You can read more about "package data files" on setuptools documentation page: 2026-04-09T21:16:15,604 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-04-09T21:16:15,605 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-04-09T21:16:15,606 even if it does not contain any `.py` files. 2026-04-09T21:16:15,606 On the other hand, currently there is no concept of package data 2026-04-09T21:16:15,607 directory, all directories are treated like packages. 2026-04-09T21:16:15,607 ******************************************************************************** 2026-04-09T21:16:15,608 !! 2026-04-09T21:16:15,609 check.warn(importable) 2026-04-09T21:16:15,609 /tmp/pip-build-env-b_w4ptr1/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'galaxy.model.migrations.alembic.versions_gxy' is absent from the `packages` configuration. 2026-04-09T21:16:15,610 !! 2026-04-09T21:16:15,611 ******************************************************************************** 2026-04-09T21:16:15,611 ############################ 2026-04-09T21:16:15,612 # Package would be ignored # 2026-04-09T21:16:15,612 ############################ 2026-04-09T21:16:15,613 Python recognizes 'galaxy.model.migrations.alembic.versions_gxy' as an importable package[^1], 2026-04-09T21:16:15,613 but it is absent from setuptools' `packages` configuration. 2026-04-09T21:16:15,614 This leads to an ambiguous overall configuration. If you want to distribute this 2026-04-09T21:16:15,615 package, please make sure that 'galaxy.model.migrations.alembic.versions_gxy' is explicitly added 2026-04-09T21:16:15,615 to the `packages` configuration field. 2026-04-09T21:16:15,616 Alternatively, you can also rely on setuptools' discovery methods 2026-04-09T21:16:15,617 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-04-09T21:16:15,617 instead of `find_packages(...)`/`find:`). 2026-04-09T21:16:15,619 You can read more about "package discovery" on setuptools documentation page: 2026-04-09T21:16:15,619 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-04-09T21:16:15,621 If you don't want 'galaxy.model.migrations.alembic.versions_gxy' to be distributed and are 2026-04-09T21:16:15,621 already explicitly excluding 'galaxy.model.migrations.alembic.versions_gxy' via 2026-04-09T21:16:15,622 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-04-09T21:16:15,622 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-04-09T21:16:15,623 combination with a more fine grained `package-data` configuration. 2026-04-09T21:16:15,624 You can read more about "package data files" on setuptools documentation page: 2026-04-09T21:16:15,625 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-04-09T21:16:15,627 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-04-09T21:16:15,628 even if it does not contain any `.py` files. 2026-04-09T21:16:15,629 On the other hand, currently there is no concept of package data 2026-04-09T21:16:15,629 directory, all directories are treated like packages. 2026-04-09T21:16:15,630 ******************************************************************************** 2026-04-09T21:16:15,631 !! 2026-04-09T21:16:15,632 check.warn(importable) 2026-04-09T21:16:15,632 /tmp/pip-build-env-b_w4ptr1/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'galaxy.model.migrations.alembic.versions_tsi' is absent from the `packages` configuration. 2026-04-09T21:16:15,633 !! 2026-04-09T21:16:15,635 ******************************************************************************** 2026-04-09T21:16:15,635 ############################ 2026-04-09T21:16:15,636 # Package would be ignored # 2026-04-09T21:16:15,636 ############################ 2026-04-09T21:16:15,637 Python recognizes 'galaxy.model.migrations.alembic.versions_tsi' as an importable package[^1], 2026-04-09T21:16:15,637 but it is absent from setuptools' `packages` configuration. 2026-04-09T21:16:15,638 This leads to an ambiguous overall configuration. If you want to distribute this 2026-04-09T21:16:15,639 package, please make sure that 'galaxy.model.migrations.alembic.versions_tsi' is explicitly added 2026-04-09T21:16:15,639 to the `packages` configuration field. 2026-04-09T21:16:15,640 Alternatively, you can also rely on setuptools' discovery methods 2026-04-09T21:16:15,641 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-04-09T21:16:15,641 instead of `find_packages(...)`/`find:`). 2026-04-09T21:16:15,642 You can read more about "package discovery" on setuptools documentation page: 2026-04-09T21:16:15,643 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-04-09T21:16:15,644 If you don't want 'galaxy.model.migrations.alembic.versions_tsi' to be distributed and are 2026-04-09T21:16:15,645 already explicitly excluding 'galaxy.model.migrations.alembic.versions_tsi' via 2026-04-09T21:16:15,645 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-04-09T21:16:15,646 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-04-09T21:16:15,646 combination with a more fine grained `package-data` configuration. 2026-04-09T21:16:15,647 You can read more about "package data files" on setuptools documentation page: 2026-04-09T21:16:15,648 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-04-09T21:16:15,650 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-04-09T21:16:15,651 even if it does not contain any `.py` files. 2026-04-09T21:16:15,651 On the other hand, currently there is no concept of package data 2026-04-09T21:16:15,652 directory, all directories are treated like packages. 2026-04-09T21:16:15,652 ******************************************************************************** 2026-04-09T21:16:15,653 !! 2026-04-09T21:16:15,654 check.warn(importable) 2026-04-09T21:16:15,654 copying galaxy/py.typed -> build/lib/galaxy 2026-04-09T21:16:15,655 copying galaxy/datatypes/set_metadata_tool.xml -> build/lib/galaxy/datatypes 2026-04-09T21:16:15,656 copying galaxy/model/migrations/README.md -> build/lib/galaxy/model/migrations 2026-04-09T21:16:15,656 copying galaxy/model/migrations/alembic.ini -> build/lib/galaxy/model/migrations 2026-04-09T21:16:15,657 creating build/lib/galaxy/model/migrations/alembic 2026-04-09T21:16:15,657 copying galaxy/model/migrations/alembic/env.py -> build/lib/galaxy/model/migrations/alembic 2026-04-09T21:16:15,658 copying galaxy/model/migrations/alembic/script.py.mako -> build/lib/galaxy/model/migrations/alembic 2026-04-09T21:16:15,658 creating build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,659 copying galaxy/model/migrations/alembic/versions_gxy/04288b6a5b25_make_dataset_uuids_unique.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,660 copying galaxy/model/migrations/alembic/versions_gxy/0c681a59dce1_add_on_delete_to_fkey_on_event_session_.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,660 copying galaxy/model/migrations/alembic/versions_gxy/13fe10b8e35b_add_not_null_constraints_to_user_group_.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,661 copying galaxy/model/migrations/alembic/versions_gxy/186d4835587b_drop_job_state_history_update_time_.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,661 copying galaxy/model/migrations/alembic/versions_gxy/1cf595475b58_email_column_unique_constraint.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,662 copying galaxy/model/migrations/alembic/versions_gxy/1d1d7bf6ac02_tool_request_implicit_outputs.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,663 copying galaxy/model/migrations/alembic/versions_gxy/1fdd615f2cdb_add_not_null_constraints_to_user_role_.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,663 copying galaxy/model/migrations/alembic/versions_gxy/23143e0bf1d8_add_doi_column_to_workflow_table.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,664 copying galaxy/model/migrations/alembic/versions_gxy/24feca8a6a5a_add_on_delete_to_fkey_on_user_action_.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,664 copying galaxy/model/migrations/alembic/versions_gxy/25b092f7938b_add_not_null_constraints_to_group_role_.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,665 copying galaxy/model/migrations/alembic/versions_gxy/2d749563e1fe_add_notification_system_tables.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,665 copying galaxy/model/migrations/alembic/versions_gxy/2dc3386d091f_add_indexes_for_workflow_comment_.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,666 copying galaxy/model/migrations/alembic/versions_gxy/303a5583a030_add_dispatched_column_to_notifications.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,666 copying galaxy/model/migrations/alembic/versions_gxy/3100452fa030_add_workflow_invocation_message_table.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,667 copying galaxy/model/migrations/alembic/versions_gxy/312602e3191d_add_workflow_step_id_path.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,667 copying galaxy/model/migrations/alembic/versions_gxy/3356bc2ecfc4_drop_view.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,668 copying galaxy/model/migrations/alembic/versions_gxy/338d0e5deb03_add_cleanup_event_user_assoc_table.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,668 copying galaxy/model/migrations/alembic/versions_gxy/349dd9d9aac9_add_unique_constraint_to_user_role_assoc.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,669 copying galaxy/model/migrations/alembic/versions_gxy/3a2914d703ca_add_index_wf_r_s_s__workflow_invocation_.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,669 copying galaxy/model/migrations/alembic/versions_gxy/3af58c192752_implement_sample_sheets.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,670 copying galaxy/model/migrations/alembic/versions_gxy/460d0ecd1dd8_.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,670 copying galaxy/model/migrations/alembic/versions_gxy/518c8438a91b_add_when_expression_column.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,671 copying galaxy/model/migrations/alembic/versions_gxy/55f02fd8ab6c_add_index_on_hda_extension.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,671 copying galaxy/model/migrations/alembic/versions_gxy/56ddf316dbd0_add_unique_constraint_to_user_group_.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,672 copying galaxy/model/migrations/alembic/versions_gxy/570bce1e82f9_drop_cloudauthz_table.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,673 copying galaxy/model/migrations/alembic/versions_gxy/5924fbf10430_add_galaxy_url_column_to_notifications.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,673 copying galaxy/model/migrations/alembic/versions_gxy/59e024ceaca1_add_export_association_table.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,674 copying galaxy/model/migrations/alembic/versions_gxy/63dc6cca023f_add_is_webapp_column_to_worker_process.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,675 copying galaxy/model/migrations/alembic/versions_gxy/6a67bf27e6a6_deferred_data_tables.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,675 copying galaxy/model/migrations/alembic/versions_gxy/71eeb8d91f92_workflow_readme.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,676 copying galaxy/model/migrations/alembic/versions_gxy/724237cc4cf0_migrate_custos_to_psa_tokens.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,676 copying galaxy/model/migrations/alembic/versions_gxy/75348cfb3715_.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,677 copying galaxy/model/migrations/alembic/versions_gxy/75b461a2b24a_merge_heads.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,677 copying galaxy/model/migrations/alembic/versions_gxy/7ffd33d5d144_implement_structured_tool_state.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,678 copying galaxy/model/migrations/alembic/versions_gxy/81362686fd64_add_origin_column_to_landing_requests.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,678 copying galaxy/model/migrations/alembic/versions_gxy/8a19186a6ee7_add_columns_to_interactivetool_entry_point.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,679 copying galaxy/model/migrations/alembic/versions_gxy/92fb564c7095_.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,679 copying galaxy/model/migrations/alembic/versions_gxy/9540a051226e_preferred_object_store_ids.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,680 copying galaxy/model/migrations/alembic/versions_gxy/98621a25ab75_merge_migration_heads.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,681 copying galaxy/model/migrations/alembic/versions_gxy/987ce9839ecb_create_celery_user_rate_limit_table.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,681 copying galaxy/model/migrations/alembic/versions_gxy/9930b68c85af_add_workflow_invocation_completion.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,682 copying galaxy/model/migrations/alembic/versions_gxy/9a5207190a4d_remove_unique_constraint_from_role_name.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,682 copying galaxy/model/migrations/alembic/versions_gxy/9ef6431f3a4e_add_unique_constraint_to_group_role_.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,683 copying galaxy/model/migrations/alembic/versions_gxy/a4c3ef999ab5_add_index_on_tool_id_column_of_job_table.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,683 copying galaxy/model/migrations/alembic/versions_gxy/a5c5455b849a_drop_job_params_column.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,684 copying galaxy/model/migrations/alembic/versions_gxy/a91ea1d97111_update_trigger_to_use_clock_timestamp_.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,685 copying galaxy/model/migrations/alembic/versions_gxy/a99a5b52ccb8_add_workflow_source_and_workflow_source_.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,685 copying galaxy/model/migrations/alembic/versions_gxy/b182f655505f_add_workflow_source_metadata_column.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,686 copying galaxy/model/migrations/alembic/versions_gxy/b855b714e8b8_make_api_keys_deleted_non_nullable.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,686 copying galaxy/model/migrations/alembic/versions_gxy/c0959ad462b2_add_tool_id_and_tool_version_to_tool_.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,687 copying galaxy/model/migrations/alembic/versions_gxy/c14a3c93d66a_add_user_defined_object_stores.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,688 copying galaxy/model/migrations/alembic/versions_gxy/c14a3c93d66b_add_user_defined_file_sources.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,688 copying galaxy/model/migrations/alembic/versions_gxy/c39f1de47a04_add_skipped_state_to_collection_job_.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,689 copying galaxy/model/migrations/alembic/versions_gxy/c44ae5f3dcf1_merge_25_0_into_dev.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,689 copying galaxy/model/migrations/alembic/versions_gxy/c63848676caf_update_username_column_schema_and_data.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,690 copying galaxy/model/migrations/alembic/versions_gxy/c716ee82337b_replace_triggers.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,690 copying galaxy/model/migrations/alembic/versions_gxy/c8c9bd29810d_add_user_credentials_table.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,691 copying galaxy/model/migrations/alembic/versions_gxy/caa7742f7bca_add_index_wf_r_i_p__workflow_invocation_.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,691 copying galaxy/model/migrations/alembic/versions_gxy/caeee878d7cd_add_on_delete_to_fkey_on_galaxy_session_.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,692 copying galaxy/model/migrations/alembic/versions_gxy/cbc46035eba0_chat_exchange_storage.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,692 copying galaxy/model/migrations/alembic/versions_gxy/cd26484899fb_add_job_credentials_context_association_.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,693 copying galaxy/model/migrations/alembic/versions_gxy/cde5d2db77e7_add_on_delete_to_fkey_on_job_session_id.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,694 copying galaxy/model/migrations/alembic/versions_gxy/d0583094c8cd_add_quota_source_labels.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,694 copying galaxy/model/migrations/alembic/versions_gxy/d2d8f51ebb7e_merge_uuid_migration_into_dev.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,695 copying galaxy/model/migrations/alembic/versions_gxy/d619fdfa6168_username_column_unique_constraint.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,695 copying galaxy/model/migrations/alembic/versions_gxy/ddbdbc40bdc1_add_workflow_comment_table.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,696 copying galaxy/model/migrations/alembic/versions_gxy/e0561d5fc8c7_add_archived_columns_to_history.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,696 copying galaxy/model/migrations/alembic/versions_gxy/e0e3bb173ee6_add_column_deleted_to_api_keys.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,697 copying galaxy/model/migrations/alembic/versions_gxy/e382f8eb5e12_create_landing_request_association_tables.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,697 copying galaxy/model/migrations/alembic/versions_gxy/e7b6dcb09efd_create_gxy_branch.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,698 copying galaxy/model/migrations/alembic/versions_gxy/e93c5d0b47a9_alter_column_external_user_id.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,699 copying galaxy/model/migrations/alembic/versions_gxy/ec25b23b08e2_implement_fixed_length_collections.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,699 copying galaxy/model/migrations/alembic/versions_gxy/eee9229a9765_.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,700 copying galaxy/model/migrations/alembic/versions_gxy/f070559879f1_create_user_dynamic_tool_association_.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,700 copying galaxy/model/migrations/alembic/versions_gxy/fb16d09348db_dataset_source_requested_transform.py -> build/lib/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:15,701 creating build/lib/galaxy/model/migrations/alembic/versions_tsi 2026-04-09T21:16:15,701 copying galaxy/model/migrations/alembic/versions_tsi/d4a650f47a3c_create_tsi_branch.py -> build/lib/galaxy/model/migrations/alembic/versions_tsi 2026-04-09T21:16:15,702 copying galaxy/model/dataset_collections/rule_targets.yml -> build/lib/galaxy/model/dataset_collections 2026-04-09T21:16:15,702 creating build/lib/galaxy/datatypes/display_applications/configs/biom 2026-04-09T21:16:15,703 copying galaxy/datatypes/display_applications/configs/biom/biom_simple.xml -> build/lib/galaxy/datatypes/display_applications/configs/biom 2026-04-09T21:16:15,703 creating build/lib/galaxy/datatypes/display_applications/configs/ensembl 2026-04-09T21:16:15,704 copying galaxy/datatypes/display_applications/configs/ensembl/ensembl_bam.xml -> build/lib/galaxy/datatypes/display_applications/configs/ensembl 2026-04-09T21:16:15,704 copying galaxy/datatypes/display_applications/configs/ensembl/ensembl_gff.xml -> build/lib/galaxy/datatypes/display_applications/configs/ensembl 2026-04-09T21:16:15,705 copying galaxy/datatypes/display_applications/configs/ensembl/ensembl_interval_as_bed.xml -> build/lib/galaxy/datatypes/display_applications/configs/ensembl 2026-04-09T21:16:15,705 creating build/lib/galaxy/datatypes/display_applications/configs/gbrowse 2026-04-09T21:16:15,706 copying galaxy/datatypes/display_applications/configs/gbrowse/gbrowse_gff.xml -> build/lib/galaxy/datatypes/display_applications/configs/gbrowse 2026-04-09T21:16:15,706 copying galaxy/datatypes/display_applications/configs/gbrowse/gbrowse_interval_as_bed.xml -> build/lib/galaxy/datatypes/display_applications/configs/gbrowse 2026-04-09T21:16:15,707 copying galaxy/datatypes/display_applications/configs/gbrowse/gbrowse_wig.xml -> build/lib/galaxy/datatypes/display_applications/configs/gbrowse 2026-04-09T21:16:15,708 creating build/lib/galaxy/datatypes/display_applications/configs/icn3d 2026-04-09T21:16:15,708 copying galaxy/datatypes/display_applications/configs/icn3d/icn3d_simple.xml -> build/lib/galaxy/datatypes/display_applications/configs/icn3d 2026-04-09T21:16:15,709 creating build/lib/galaxy/datatypes/display_applications/configs/igb 2026-04-09T21:16:15,709 copying galaxy/datatypes/display_applications/configs/igb/bam.xml -> build/lib/galaxy/datatypes/display_applications/configs/igb 2026-04-09T21:16:15,710 copying galaxy/datatypes/display_applications/configs/igb/bb.xml -> build/lib/galaxy/datatypes/display_applications/configs/igb 2026-04-09T21:16:15,710 copying galaxy/datatypes/display_applications/configs/igb/bed.xml -> build/lib/galaxy/datatypes/display_applications/configs/igb 2026-04-09T21:16:15,711 copying galaxy/datatypes/display_applications/configs/igb/bedgraph.xml -> build/lib/galaxy/datatypes/display_applications/configs/igb 2026-04-09T21:16:15,712 copying galaxy/datatypes/display_applications/configs/igb/bigwig.xml -> build/lib/galaxy/datatypes/display_applications/configs/igb 2026-04-09T21:16:15,712 copying galaxy/datatypes/display_applications/configs/igb/cram.xml -> build/lib/galaxy/datatypes/display_applications/configs/igb 2026-04-09T21:16:15,713 copying galaxy/datatypes/display_applications/configs/igb/gtf.xml -> build/lib/galaxy/datatypes/display_applications/configs/igb 2026-04-09T21:16:15,714 copying galaxy/datatypes/display_applications/configs/igb/wig.xml -> build/lib/galaxy/datatypes/display_applications/configs/igb 2026-04-09T21:16:15,714 creating build/lib/galaxy/datatypes/display_applications/configs/igv 2026-04-09T21:16:15,715 copying galaxy/datatypes/display_applications/configs/igv/bam.xml -> build/lib/galaxy/datatypes/display_applications/configs/igv 2026-04-09T21:16:15,715 copying galaxy/datatypes/display_applications/configs/igv/bigwig.xml -> build/lib/galaxy/datatypes/display_applications/configs/igv 2026-04-09T21:16:15,716 copying galaxy/datatypes/display_applications/configs/igv/genbank.xml -> build/lib/galaxy/datatypes/display_applications/configs/igv 2026-04-09T21:16:15,716 copying galaxy/datatypes/display_applications/configs/igv/genome_fasta.xml -> build/lib/galaxy/datatypes/display_applications/configs/igv 2026-04-09T21:16:15,717 copying galaxy/datatypes/display_applications/configs/igv/gff.xml -> build/lib/galaxy/datatypes/display_applications/configs/igv 2026-04-09T21:16:15,717 copying galaxy/datatypes/display_applications/configs/igv/interval_as_bed.xml -> build/lib/galaxy/datatypes/display_applications/configs/igv 2026-04-09T21:16:15,718 copying galaxy/datatypes/display_applications/configs/igv/vcf.xml -> build/lib/galaxy/datatypes/display_applications/configs/igv 2026-04-09T21:16:15,718 creating build/lib/galaxy/datatypes/display_applications/configs/image 2026-04-09T21:16:15,719 copying galaxy/datatypes/display_applications/configs/image/avivator.xml -> build/lib/galaxy/datatypes/display_applications/configs/image 2026-04-09T21:16:15,719 creating build/lib/galaxy/datatypes/display_applications/configs/intermine 2026-04-09T21:16:15,720 copying galaxy/datatypes/display_applications/configs/intermine/intermine_simple.xml -> build/lib/galaxy/datatypes/display_applications/configs/intermine 2026-04-09T21:16:15,720 creating build/lib/galaxy/datatypes/display_applications/configs/iobio 2026-04-09T21:16:15,721 copying galaxy/datatypes/display_applications/configs/iobio/bam.xml -> build/lib/galaxy/datatypes/display_applications/configs/iobio 2026-04-09T21:16:15,721 copying galaxy/datatypes/display_applications/configs/iobio/vcf.xml -> build/lib/galaxy/datatypes/display_applications/configs/iobio 2026-04-09T21:16:15,722 creating build/lib/galaxy/datatypes/display_applications/configs/minerva 2026-04-09T21:16:15,722 copying galaxy/datatypes/display_applications/configs/minerva/tabular.xml -> build/lib/galaxy/datatypes/display_applications/configs/minerva 2026-04-09T21:16:15,723 creating build/lib/galaxy/datatypes/display_applications/configs/qiime/qiime2 2026-04-09T21:16:15,723 copying galaxy/datatypes/display_applications/configs/qiime/qiime2/q2view.xml -> build/lib/galaxy/datatypes/display_applications/configs/qiime/qiime2 2026-04-09T21:16:15,724 creating build/lib/galaxy/datatypes/display_applications/configs/rviewer 2026-04-09T21:16:15,724 copying galaxy/datatypes/display_applications/configs/rviewer/bed.xml -> build/lib/galaxy/datatypes/display_applications/configs/rviewer 2026-04-09T21:16:15,725 copying galaxy/datatypes/display_applications/configs/rviewer/vcf.xml -> build/lib/galaxy/datatypes/display_applications/configs/rviewer 2026-04-09T21:16:15,726 creating build/lib/galaxy/datatypes/display_applications/configs/ucsc 2026-04-09T21:16:15,726 copying galaxy/datatypes/display_applications/configs/ucsc/bam.xml -> build/lib/galaxy/datatypes/display_applications/configs/ucsc 2026-04-09T21:16:15,727 copying galaxy/datatypes/display_applications/configs/ucsc/bigbed.xml -> build/lib/galaxy/datatypes/display_applications/configs/ucsc 2026-04-09T21:16:15,727 copying galaxy/datatypes/display_applications/configs/ucsc/bigwig.xml -> build/lib/galaxy/datatypes/display_applications/configs/ucsc 2026-04-09T21:16:15,728 copying galaxy/datatypes/display_applications/configs/ucsc/interval_as_bed.xml -> build/lib/galaxy/datatypes/display_applications/configs/ucsc 2026-04-09T21:16:15,729 copying galaxy/datatypes/display_applications/configs/ucsc/maf_customtrack.xml -> build/lib/galaxy/datatypes/display_applications/configs/ucsc 2026-04-09T21:16:15,730 copying galaxy/datatypes/display_applications/configs/ucsc/trackhub.xml -> build/lib/galaxy/datatypes/display_applications/configs/ucsc 2026-04-09T21:16:15,730 copying galaxy/datatypes/display_applications/configs/ucsc/vcf.xml -> build/lib/galaxy/datatypes/display_applications/configs/ucsc 2026-04-09T21:16:15,730 creating build/lib/galaxy/datatypes/display_applications/xsd 2026-04-09T21:16:15,731 copying galaxy/datatypes/display_applications/xsd/geda.xsd -> build/lib/galaxy/datatypes/display_applications/xsd 2026-04-09T21:16:15,731 copying galaxy/datatypes/converters/archive_to_directory.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,732 copying galaxy/datatypes/converters/bam_to_bai.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,732 copying galaxy/datatypes/converters/bam_to_bigwig_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,733 copying galaxy/datatypes/converters/bcf_bcf_uncompressed_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,733 copying galaxy/datatypes/converters/bed_gff_or_vcf_to_bigwig_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,734 copying galaxy/datatypes/converters/bed_to_fli_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,734 copying galaxy/datatypes/converters/bed_to_gff_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,735 copying galaxy/datatypes/converters/bed_to_interval_index_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,736 copying galaxy/datatypes/converters/bedgraph_to_bigwig_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,736 copying galaxy/datatypes/converters/bigbed_to_bed_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,737 copying galaxy/datatypes/converters/bigwig_to_wig_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,737 copying galaxy/datatypes/converters/biom.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,738 copying galaxy/datatypes/converters/bz2_to_uncompressed.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,738 copying galaxy/datatypes/converters/cml_to_smi_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,739 copying galaxy/datatypes/converters/cram_to_bam_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,739 copying galaxy/datatypes/converters/csv_to_tabular.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,740 copying galaxy/datatypes/converters/fasta_to_2bit.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,740 copying galaxy/datatypes/converters/fasta_to_bowtie_base_index_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,741 copying galaxy/datatypes/converters/fasta_to_bowtie_color_index_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,743 copying galaxy/datatypes/converters/fasta_to_fai.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,745 copying galaxy/datatypes/converters/fasta_to_len.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,747 copying galaxy/datatypes/converters/fasta_to_tabular_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,749 copying galaxy/datatypes/converters/fastq_to_fqtoc.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,751 copying galaxy/datatypes/converters/fastqsolexa_to_fasta_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,754 copying galaxy/datatypes/converters/fastqsolexa_to_qual_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,756 copying galaxy/datatypes/converters/gff_to_bed_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,758 copying galaxy/datatypes/converters/gff_to_fli_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,760 copying galaxy/datatypes/converters/gff_to_interval_index_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,762 copying galaxy/datatypes/converters/gro_to_pdb.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,764 copying galaxy/datatypes/converters/gz_to_uncompressed.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,766 copying galaxy/datatypes/converters/inchi_to_mol_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,768 copying galaxy/datatypes/converters/interval_to_bed12_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,771 copying galaxy/datatypes/converters/interval_to_bed6_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,773 copying galaxy/datatypes/converters/interval_to_bed_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,775 copying galaxy/datatypes/converters/interval_to_bedstrict_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,777 copying galaxy/datatypes/converters/interval_to_bgzip_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,780 copying galaxy/datatypes/converters/interval_to_bigwig_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,782 copying galaxy/datatypes/converters/interval_to_interval_index_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,784 copying galaxy/datatypes/converters/interval_to_tabix_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,786 copying galaxy/datatypes/converters/len_to_linecount.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,789 copying galaxy/datatypes/converters/lped_to_fped_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,791 copying galaxy/datatypes/converters/lped_to_pbed_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,793 copying galaxy/datatypes/converters/maf_to_fasta_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,795 copying galaxy/datatypes/converters/maf_to_interval_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,797 copying galaxy/datatypes/converters/mdconvert.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,800 copying galaxy/datatypes/converters/mol2_to_mol_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,802 copying galaxy/datatypes/converters/molecules_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,804 copying galaxy/datatypes/converters/neostorezip_to_neostore_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,807 copying galaxy/datatypes/converters/parquet_to_csv_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,809 copying galaxy/datatypes/converters/pbed_ldreduced_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,811 copying galaxy/datatypes/converters/pbed_to_lped_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,813 copying galaxy/datatypes/converters/pdb_to_gro.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,815 copying galaxy/datatypes/converters/picard_interval_list_to_bed6_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,817 copying galaxy/datatypes/converters/pileup_to_interval_index_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,820 copying galaxy/datatypes/converters/ref_to_seq_taxonomy_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,822 copying galaxy/datatypes/converters/sam_to_bigwig_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,824 copying galaxy/datatypes/converters/sam_to_unsorted_bam.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,826 copying galaxy/datatypes/converters/smi_to_mol_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,828 copying galaxy/datatypes/converters/smi_to_smi_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,830 copying galaxy/datatypes/converters/tabular_to_csv.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,832 copying galaxy/datatypes/converters/tabular_to_dbnsfp.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,834 copying galaxy/datatypes/converters/tar_to_directory.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,836 copying galaxy/datatypes/converters/to_coordinate_sorted_bam.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,839 copying galaxy/datatypes/converters/to_qname_sorted_bam.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,841 copying galaxy/datatypes/converters/uncompressed_to_gz.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,843 copying galaxy/datatypes/converters/vcf_bgzip_to_tabix_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,845 copying galaxy/datatypes/converters/vcf_to_interval_index_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,847 copying galaxy/datatypes/converters/vcf_to_vcf_bgzip_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,849 copying galaxy/datatypes/converters/wig_to_bigwig_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,851 copying galaxy/datatypes/converters/wiggle_to_simple_converter.xml -> build/lib/galaxy/datatypes/converters 2026-04-09T21:16:15,875 installing to build/bdist.linux-armv7l/wheel 2026-04-09T21:16:15,875 running install 2026-04-09T21:16:15,897 running install_lib 2026-04-09T21:16:15,903 creating build/bdist.linux-armv7l/wheel 2026-04-09T21:16:15,905 creating build/bdist.linux-armv7l/wheel/galaxy 2026-04-09T21:16:15,906 copying build/lib/galaxy/__init__.py -> build/bdist.linux-armv7l/wheel/./galaxy 2026-04-09T21:16:15,909 creating build/bdist.linux-armv7l/wheel/galaxy/security 2026-04-09T21:16:15,910 copying build/lib/galaxy/security/__init__.py -> build/bdist.linux-armv7l/wheel/./galaxy/security 2026-04-09T21:16:15,913 copying build/lib/galaxy/security/vault.py -> build/bdist.linux-armv7l/wheel/./galaxy/security 2026-04-09T21:16:15,915 copying build/lib/galaxy/security/ssh_util.py -> build/bdist.linux-armv7l/wheel/./galaxy/security 2026-04-09T21:16:15,917 copying build/lib/galaxy/security/passwords.py -> build/bdist.linux-armv7l/wheel/./galaxy/security 2026-04-09T21:16:15,919 copying build/lib/galaxy/security/validate_user_input.py -> build/bdist.linux-armv7l/wheel/./galaxy/security 2026-04-09T21:16:15,921 copying build/lib/galaxy/security/idencoding.py -> build/bdist.linux-armv7l/wheel/./galaxy/security 2026-04-09T21:16:15,923 copying build/lib/galaxy/security/object_wrapper.py -> build/bdist.linux-armv7l/wheel/./galaxy/security 2026-04-09T21:16:15,927 creating build/bdist.linux-armv7l/wheel/galaxy/quota 2026-04-09T21:16:15,928 copying build/lib/galaxy/quota/__init__.py -> build/bdist.linux-armv7l/wheel/./galaxy/quota 2026-04-09T21:16:15,930 copying build/lib/galaxy/quota/_schema.py -> build/bdist.linux-armv7l/wheel/./galaxy/quota 2026-04-09T21:16:15,934 creating build/bdist.linux-armv7l/wheel/galaxy/model 2026-04-09T21:16:15,935 creating build/bdist.linux-armv7l/wheel/galaxy/model/orm 2026-04-09T21:16:15,936 copying build/lib/galaxy/model/orm/scripts.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/orm 2026-04-09T21:16:15,939 copying build/lib/galaxy/model/orm/__init__.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/orm 2026-04-09T21:16:15,941 copying build/lib/galaxy/model/orm/util.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/orm 2026-04-09T21:16:15,943 copying build/lib/galaxy/model/orm/now.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/orm 2026-04-09T21:16:15,944 copying build/lib/galaxy/model/orm/engine_factory.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/orm 2026-04-09T21:16:15,947 copying build/lib/galaxy/model/__init__.py -> build/bdist.linux-armv7l/wheel/./galaxy/model 2026-04-09T21:16:15,958 creating build/bdist.linux-armv7l/wheel/galaxy/model/triggers 2026-04-09T21:16:15,959 copying build/lib/galaxy/model/triggers/__init__.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/triggers 2026-04-09T21:16:15,961 copying build/lib/galaxy/model/triggers/update_audit_table.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/triggers 2026-04-09T21:16:15,964 creating build/bdist.linux-armv7l/wheel/galaxy/model/migrations 2026-04-09T21:16:15,966 copying build/lib/galaxy/model/migrations/scripts.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations 2026-04-09T21:16:15,968 copying build/lib/galaxy/model/migrations/__init__.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations 2026-04-09T21:16:15,971 copying build/lib/galaxy/model/migrations/exceptions.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations 2026-04-09T21:16:15,973 copying build/lib/galaxy/model/migrations/util.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations 2026-04-09T21:16:15,975 copying build/lib/galaxy/model/migrations/dbrevisions.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations 2026-04-09T21:16:15,977 copying build/lib/galaxy/model/migrations/alembic.ini -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations 2026-04-09T21:16:15,979 copying build/lib/galaxy/model/migrations/README.md -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations 2026-04-09T21:16:15,981 copying build/lib/galaxy/model/migrations/base.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations 2026-04-09T21:16:15,984 creating build/bdist.linux-armv7l/wheel/galaxy/model/migrations/data_fixes 2026-04-09T21:16:15,985 copying build/lib/galaxy/model/migrations/data_fixes/association_table_fixer.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/data_fixes 2026-04-09T21:16:15,987 copying build/lib/galaxy/model/migrations/data_fixes/__init__.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/data_fixes 2026-04-09T21:16:15,989 copying build/lib/galaxy/model/migrations/data_fixes/user_table_fixer.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/data_fixes 2026-04-09T21:16:15,991 copying build/lib/galaxy/model/migrations/data_fixes/custos_to_psa.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/data_fixes 2026-04-09T21:16:15,994 copying build/lib/galaxy/model/migrations/dbscript.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations 2026-04-09T21:16:15,996 creating build/bdist.linux-armv7l/wheel/galaxy/model/migrations/alembic 2026-04-09T21:16:15,997 creating build/bdist.linux-armv7l/wheel/galaxy/model/migrations/alembic/versions_tsi 2026-04-09T21:16:15,999 copying build/lib/galaxy/model/migrations/alembic/versions_tsi/d4a650f47a3c_create_tsi_branch.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_tsi 2026-04-09T21:16:16,004 creating build/bdist.linux-armv7l/wheel/galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,005 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/e0561d5fc8c7_add_archived_columns_to_history.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,007 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/c39f1de47a04_add_skipped_state_to_collection_job_.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,009 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/a99a5b52ccb8_add_workflow_source_and_workflow_source_.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,011 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/55f02fd8ab6c_add_index_on_hda_extension.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,013 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/75348cfb3715_.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,015 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/987ce9839ecb_create_celery_user_rate_limit_table.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,017 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/98621a25ab75_merge_migration_heads.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,018 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/e382f8eb5e12_create_landing_request_association_tables.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,020 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/24feca8a6a5a_add_on_delete_to_fkey_on_user_action_.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,022 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/3a2914d703ca_add_index_wf_r_s_s__workflow_invocation_.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,024 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/312602e3191d_add_workflow_step_id_path.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,025 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/570bce1e82f9_drop_cloudauthz_table.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,027 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/ddbdbc40bdc1_add_workflow_comment_table.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,029 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/9540a051226e_preferred_object_store_ids.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,031 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/338d0e5deb03_add_cleanup_event_user_assoc_table.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,033 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/56ddf316dbd0_add_unique_constraint_to_user_group_.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,035 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/518c8438a91b_add_when_expression_column.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,037 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/a5c5455b849a_drop_job_params_column.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,039 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/0c681a59dce1_add_on_delete_to_fkey_on_event_session_.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,040 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/460d0ecd1dd8_.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,042 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/a4c3ef999ab5_add_index_on_tool_id_column_of_job_table.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,044 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/81362686fd64_add_origin_column_to_landing_requests.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,046 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/1d1d7bf6ac02_tool_request_implicit_outputs.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,048 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/2dc3386d091f_add_indexes_for_workflow_comment_.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,050 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/f070559879f1_create_user_dynamic_tool_association_.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,052 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/c14a3c93d66b_add_user_defined_file_sources.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,054 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/c44ae5f3dcf1_merge_25_0_into_dev.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,056 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/25b092f7938b_add_not_null_constraints_to_group_role_.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,058 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/59e024ceaca1_add_export_association_table.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,059 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/186d4835587b_drop_job_state_history_update_time_.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,061 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/e7b6dcb09efd_create_gxy_branch.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,063 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/9a5207190a4d_remove_unique_constraint_from_role_name.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,065 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/b182f655505f_add_workflow_source_metadata_column.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,067 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/cbc46035eba0_chat_exchange_storage.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,069 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/63dc6cca023f_add_is_webapp_column_to_worker_process.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,071 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/2d749563e1fe_add_notification_system_tables.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,073 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/3100452fa030_add_workflow_invocation_message_table.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,075 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/fb16d09348db_dataset_source_requested_transform.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,077 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/d2d8f51ebb7e_merge_uuid_migration_into_dev.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,079 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/c716ee82337b_replace_triggers.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,081 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/a91ea1d97111_update_trigger_to_use_clock_timestamp_.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,083 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/cde5d2db77e7_add_on_delete_to_fkey_on_job_session_id.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,085 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/9ef6431f3a4e_add_unique_constraint_to_group_role_.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,087 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/13fe10b8e35b_add_not_null_constraints_to_user_group_.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,089 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/e0e3bb173ee6_add_column_deleted_to_api_keys.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,091 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/c14a3c93d66a_add_user_defined_object_stores.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,093 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/04288b6a5b25_make_dataset_uuids_unique.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,095 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/1fdd615f2cdb_add_not_null_constraints_to_user_role_.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,097 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/c0959ad462b2_add_tool_id_and_tool_version_to_tool_.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,098 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/3af58c192752_implement_sample_sheets.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,100 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/d619fdfa6168_username_column_unique_constraint.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,102 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/7ffd33d5d144_implement_structured_tool_state.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,104 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/cd26484899fb_add_job_credentials_context_association_.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,106 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/c63848676caf_update_username_column_schema_and_data.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,108 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/1cf595475b58_email_column_unique_constraint.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,110 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/caeee878d7cd_add_on_delete_to_fkey_on_galaxy_session_.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,112 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/724237cc4cf0_migrate_custos_to_psa_tokens.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,114 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/5924fbf10430_add_galaxy_url_column_to_notifications.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,116 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/349dd9d9aac9_add_unique_constraint_to_user_role_assoc.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,118 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/75b461a2b24a_merge_heads.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,119 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/8a19186a6ee7_add_columns_to_interactivetool_entry_point.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,121 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/23143e0bf1d8_add_doi_column_to_workflow_table.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,123 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/9930b68c85af_add_workflow_invocation_completion.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,125 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/d0583094c8cd_add_quota_source_labels.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,127 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/b855b714e8b8_make_api_keys_deleted_non_nullable.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,128 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/303a5583a030_add_dispatched_column_to_notifications.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,130 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/c8c9bd29810d_add_user_credentials_table.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,132 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/ec25b23b08e2_implement_fixed_length_collections.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,133 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/92fb564c7095_.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,135 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/eee9229a9765_.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,138 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/71eeb8d91f92_workflow_readme.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,139 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/e93c5d0b47a9_alter_column_external_user_id.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,141 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/caa7742f7bca_add_index_wf_r_i_p__workflow_invocation_.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,143 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/6a67bf27e6a6_deferred_data_tables.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,145 copying build/lib/galaxy/model/migrations/alembic/versions_gxy/3356bc2ecfc4_drop_view.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic/versions_gxy 2026-04-09T21:16:16,147 copying build/lib/galaxy/model/migrations/alembic/script.py.mako -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic 2026-04-09T21:16:16,148 copying build/lib/galaxy/model/migrations/alembic/env.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/migrations/alembic 2026-04-09T21:16:16,151 copying build/lib/galaxy/model/none_like.py -> build/bdist.linux-armv7l/wheel/./galaxy/model 2026-04-09T21:16:16,153 copying build/lib/galaxy/model/mapping.py -> build/bdist.linux-armv7l/wheel/./galaxy/model 2026-04-09T21:16:16,154 copying build/lib/galaxy/model/custom_types.py -> build/bdist.linux-armv7l/wheel/./galaxy/model 2026-04-09T21:16:16,157 creating build/bdist.linux-armv7l/wheel/galaxy/model/store 2026-04-09T21:16:16,159 copying build/lib/galaxy/model/store/__init__.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/store 2026-04-09T21:16:16,163 copying build/lib/galaxy/model/store/load_objects.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/store 2026-04-09T21:16:16,165 copying build/lib/galaxy/model/store/discover.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/store 2026-04-09T21:16:16,168 copying build/lib/galaxy/model/store/build_objects.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/store 2026-04-09T21:16:16,170 copying build/lib/galaxy/model/store/_bco_convert_utils.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/store 2026-04-09T21:16:16,172 copying build/lib/galaxy/model/store/ro_crate_utils.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/store 2026-04-09T21:16:16,175 copying build/lib/galaxy/model/scoped_session.py -> build/bdist.linux-armv7l/wheel/./galaxy/model 2026-04-09T21:16:16,176 copying build/lib/galaxy/model/database_utils.py -> build/bdist.linux-armv7l/wheel/./galaxy/model 2026-04-09T21:16:16,178 copying build/lib/galaxy/model/database_object_names.py -> build/bdist.linux-armv7l/wheel/./galaxy/model 2026-04-09T21:16:16,180 copying build/lib/galaxy/model/deferred.py -> build/bdist.linux-armv7l/wheel/./galaxy/model 2026-04-09T21:16:16,182 copying build/lib/galaxy/model/database_heartbeat.py -> build/bdist.linux-armv7l/wheel/./galaxy/model 2026-04-09T21:16:16,185 copying build/lib/galaxy/model/index_filter_util.py -> build/bdist.linux-armv7l/wheel/./galaxy/model 2026-04-09T21:16:16,186 copying build/lib/galaxy/model/metadata.py -> build/bdist.linux-armv7l/wheel/./galaxy/model 2026-04-09T21:16:16,189 creating build/bdist.linux-armv7l/wheel/galaxy/model/tool_shed_install 2026-04-09T21:16:16,190 copying build/lib/galaxy/model/tool_shed_install/__init__.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/tool_shed_install 2026-04-09T21:16:16,193 copying build/lib/galaxy/model/tool_shed_install/mapping.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/tool_shed_install 2026-04-09T21:16:16,195 copying build/lib/galaxy/model/tags.py -> build/bdist.linux-armv7l/wheel/./galaxy/model 2026-04-09T21:16:16,198 creating build/bdist.linux-armv7l/wheel/galaxy/model/unittest_utils 2026-04-09T21:16:16,199 copying build/lib/galaxy/model/unittest_utils/__init__.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/unittest_utils 2026-04-09T21:16:16,201 copying build/lib/galaxy/model/unittest_utils/model_testing_utils.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/unittest_utils 2026-04-09T21:16:16,203 copying build/lib/galaxy/model/unittest_utils/store_fixtures.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/unittest_utils 2026-04-09T21:16:16,206 copying build/lib/galaxy/model/unittest_utils/data_app.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/unittest_utils 2026-04-09T21:16:16,209 copying build/lib/galaxy/model/unittest_utils/db_helpers.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/unittest_utils 2026-04-09T21:16:16,210 copying build/lib/galaxy/model/unittest_utils/utils.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/unittest_utils 2026-04-09T21:16:16,212 copying build/lib/galaxy/model/unittest_utils/migration_scripts_testing_utils.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/unittest_utils 2026-04-09T21:16:16,214 copying build/lib/galaxy/model/unittest_utils/beaker_testing_utils.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/unittest_utils 2026-04-09T21:16:16,216 copying build/lib/galaxy/model/base.py -> build/bdist.linux-armv7l/wheel/./galaxy/model 2026-04-09T21:16:16,218 copying build/lib/galaxy/model/dereference.py -> build/bdist.linux-armv7l/wheel/./galaxy/model 2026-04-09T21:16:16,221 creating build/bdist.linux-armv7l/wheel/galaxy/model/dataset_collections 2026-04-09T21:16:16,222 copying build/lib/galaxy/model/dataset_collections/__init__.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/dataset_collections 2026-04-09T21:16:16,224 copying build/lib/galaxy/model/dataset_collections/auto_pairing.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/dataset_collections 2026-04-09T21:16:16,226 copying build/lib/galaxy/model/dataset_collections/matching.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/dataset_collections 2026-04-09T21:16:16,228 copying build/lib/galaxy/model/dataset_collections/builder.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/dataset_collections 2026-04-09T21:16:16,230 copying build/lib/galaxy/model/dataset_collections/adapters.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/dataset_collections 2026-04-09T21:16:16,233 copying build/lib/galaxy/model/dataset_collections/query.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/dataset_collections 2026-04-09T21:16:16,234 copying build/lib/galaxy/model/dataset_collections/auto_identifiers.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/dataset_collections 2026-04-09T21:16:16,236 copying build/lib/galaxy/model/dataset_collections/registry.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/dataset_collections 2026-04-09T21:16:16,238 copying build/lib/galaxy/model/dataset_collections/rule_target_models.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/dataset_collections 2026-04-09T21:16:16,240 copying build/lib/galaxy/model/dataset_collections/rule_targets.yml -> build/bdist.linux-armv7l/wheel/./galaxy/model/dataset_collections 2026-04-09T21:16:16,242 copying build/lib/galaxy/model/dataset_collections/workbook_util.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/dataset_collections 2026-04-09T21:16:16,244 copying build/lib/galaxy/model/dataset_collections/type_description.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/dataset_collections 2026-04-09T21:16:16,246 copying build/lib/galaxy/model/dataset_collections/rule_target_columns.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/dataset_collections 2026-04-09T21:16:16,249 creating build/bdist.linux-armv7l/wheel/galaxy/model/dataset_collections/types 2026-04-09T21:16:16,250 copying build/lib/galaxy/model/dataset_collections/types/list.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/dataset_collections/types 2026-04-09T21:16:16,253 copying build/lib/galaxy/model/dataset_collections/types/record.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/dataset_collections/types 2026-04-09T21:16:16,254 copying build/lib/galaxy/model/dataset_collections/types/__init__.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/dataset_collections/types 2026-04-09T21:16:16,256 copying build/lib/galaxy/model/dataset_collections/types/paired_or_unpaired.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/dataset_collections/types 2026-04-09T21:16:16,258 copying build/lib/galaxy/model/dataset_collections/types/semantics.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/dataset_collections/types 2026-04-09T21:16:16,260 copying build/lib/galaxy/model/dataset_collections/types/sample_sheet_util.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/dataset_collections/types 2026-04-09T21:16:16,263 copying build/lib/galaxy/model/dataset_collections/types/paired.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/dataset_collections/types 2026-04-09T21:16:16,264 copying build/lib/galaxy/model/dataset_collections/types/sample_sheet_workbook.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/dataset_collections/types 2026-04-09T21:16:16,267 copying build/lib/galaxy/model/dataset_collections/types/sample_sheet.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/dataset_collections/types 2026-04-09T21:16:16,269 copying build/lib/galaxy/model/dataset_collections/structure.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/dataset_collections 2026-04-09T21:16:16,272 copying build/lib/galaxy/model/dataset_collections/subcollections.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/dataset_collections 2026-04-09T21:16:16,274 creating build/bdist.linux-armv7l/wheel/galaxy/model/db 2026-04-09T21:16:16,275 copying build/lib/galaxy/model/db/__init__.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/db 2026-04-09T21:16:16,277 copying build/lib/galaxy/model/db/role.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/db 2026-04-09T21:16:16,279 copying build/lib/galaxy/model/db/library.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/db 2026-04-09T21:16:16,280 copying build/lib/galaxy/model/db/user.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/db 2026-04-09T21:16:16,282 copying build/lib/galaxy/model/keyset_token_pagination.py -> build/bdist.linux-armv7l/wheel/./galaxy/model 2026-04-09T21:16:16,284 copying build/lib/galaxy/model/security.py -> build/bdist.linux-armv7l/wheel/./galaxy/model 2026-04-09T21:16:16,288 creating build/bdist.linux-armv7l/wheel/galaxy/model/scripts 2026-04-09T21:16:16,289 copying build/lib/galaxy/model/scripts/__init__.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/scripts 2026-04-09T21:16:16,291 copying build/lib/galaxy/model/scripts/delete_job_metrics.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/scripts 2026-04-09T21:16:16,293 copying build/lib/galaxy/model/scripts/history_table_pruner.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/scripts 2026-04-09T21:16:16,295 copying build/lib/galaxy/model/scripts/prune_history_table.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/scripts 2026-04-09T21:16:16,297 copying build/lib/galaxy/model/scripts/delete_galaxy_sessions.py -> build/bdist.linux-armv7l/wheel/./galaxy/model/scripts 2026-04-09T21:16:16,299 copying build/lib/galaxy/model/item_attrs.py -> build/bdist.linux-armv7l/wheel/./galaxy/model 2026-04-09T21:16:16,301 copying build/lib/galaxy/py.typed -> build/bdist.linux-armv7l/wheel/./galaxy 2026-04-09T21:16:16,304 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes 2026-04-09T21:16:16,305 copying build/lib/galaxy/datatypes/flow.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,307 copying build/lib/galaxy/datatypes/mothur.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,310 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications 2026-04-09T21:16:16,311 copying build/lib/galaxy/datatypes/display_applications/__init__.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications 2026-04-09T21:16:16,313 copying build/lib/galaxy/datatypes/display_applications/util.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications 2026-04-09T21:16:16,315 copying build/lib/galaxy/datatypes/display_applications/application.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications 2026-04-09T21:16:16,317 copying build/lib/galaxy/datatypes/display_applications/parameters.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications 2026-04-09T21:16:16,320 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/xsd 2026-04-09T21:16:16,321 copying build/lib/galaxy/datatypes/display_applications/xsd/geda.xsd -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/xsd 2026-04-09T21:16:16,325 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs 2026-04-09T21:16:16,326 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/ucsc 2026-04-09T21:16:16,327 copying build/lib/galaxy/datatypes/display_applications/configs/ucsc/bigwig.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/ucsc 2026-04-09T21:16:16,329 copying build/lib/galaxy/datatypes/display_applications/configs/ucsc/bigbed.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/ucsc 2026-04-09T21:16:16,331 copying build/lib/galaxy/datatypes/display_applications/configs/ucsc/maf_customtrack.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/ucsc 2026-04-09T21:16:16,333 copying build/lib/galaxy/datatypes/display_applications/configs/ucsc/interval_as_bed.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/ucsc 2026-04-09T21:16:16,335 copying build/lib/galaxy/datatypes/display_applications/configs/ucsc/trackhub.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/ucsc 2026-04-09T21:16:16,337 copying build/lib/galaxy/datatypes/display_applications/configs/ucsc/vcf.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/ucsc 2026-04-09T21:16:16,339 copying build/lib/galaxy/datatypes/display_applications/configs/ucsc/bam.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/ucsc 2026-04-09T21:16:16,341 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/intermine 2026-04-09T21:16:16,342 copying build/lib/galaxy/datatypes/display_applications/configs/intermine/intermine_simple.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/intermine 2026-04-09T21:16:16,344 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/image 2026-04-09T21:16:16,345 copying build/lib/galaxy/datatypes/display_applications/configs/image/avivator.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/image 2026-04-09T21:16:16,348 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/ensembl 2026-04-09T21:16:16,349 copying build/lib/galaxy/datatypes/display_applications/configs/ensembl/ensembl_interval_as_bed.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/ensembl 2026-04-09T21:16:16,351 copying build/lib/galaxy/datatypes/display_applications/configs/ensembl/ensembl_gff.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/ensembl 2026-04-09T21:16:16,353 copying build/lib/galaxy/datatypes/display_applications/configs/ensembl/ensembl_bam.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/ensembl 2026-04-09T21:16:16,355 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/igv 2026-04-09T21:16:16,356 copying build/lib/galaxy/datatypes/display_applications/configs/igv/bigwig.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/igv 2026-04-09T21:16:16,358 copying build/lib/galaxy/datatypes/display_applications/configs/igv/gff.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/igv 2026-04-09T21:16:16,360 copying build/lib/galaxy/datatypes/display_applications/configs/igv/interval_as_bed.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/igv 2026-04-09T21:16:16,362 copying build/lib/galaxy/datatypes/display_applications/configs/igv/genome_fasta.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/igv 2026-04-09T21:16:16,364 copying build/lib/galaxy/datatypes/display_applications/configs/igv/genbank.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/igv 2026-04-09T21:16:16,367 copying build/lib/galaxy/datatypes/display_applications/configs/igv/vcf.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/igv 2026-04-09T21:16:16,369 copying build/lib/galaxy/datatypes/display_applications/configs/igv/bam.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/igv 2026-04-09T21:16:16,372 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/qiime 2026-04-09T21:16:16,373 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/qiime/qiime2 2026-04-09T21:16:16,374 copying build/lib/galaxy/datatypes/display_applications/configs/qiime/qiime2/q2view.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/qiime/qiime2 2026-04-09T21:16:16,377 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/biom 2026-04-09T21:16:16,378 copying build/lib/galaxy/datatypes/display_applications/configs/biom/biom_simple.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/biom 2026-04-09T21:16:16,381 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/minerva 2026-04-09T21:16:16,382 copying build/lib/galaxy/datatypes/display_applications/configs/minerva/tabular.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/minerva 2026-04-09T21:16:16,384 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/gbrowse 2026-04-09T21:16:16,385 copying build/lib/galaxy/datatypes/display_applications/configs/gbrowse/gbrowse_interval_as_bed.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/gbrowse 2026-04-09T21:16:16,387 copying build/lib/galaxy/datatypes/display_applications/configs/gbrowse/gbrowse_wig.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/gbrowse 2026-04-09T21:16:16,389 copying build/lib/galaxy/datatypes/display_applications/configs/gbrowse/gbrowse_gff.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/gbrowse 2026-04-09T21:16:16,391 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/iobio 2026-04-09T21:16:16,392 copying build/lib/galaxy/datatypes/display_applications/configs/iobio/vcf.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/iobio 2026-04-09T21:16:16,394 copying build/lib/galaxy/datatypes/display_applications/configs/iobio/bam.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/iobio 2026-04-09T21:16:16,396 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/rviewer 2026-04-09T21:16:16,397 copying build/lib/galaxy/datatypes/display_applications/configs/rviewer/vcf.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/rviewer 2026-04-09T21:16:16,399 copying build/lib/galaxy/datatypes/display_applications/configs/rviewer/bed.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/rviewer 2026-04-09T21:16:16,401 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/igb 2026-04-09T21:16:16,403 copying build/lib/galaxy/datatypes/display_applications/configs/igb/bigwig.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/igb 2026-04-09T21:16:16,404 copying build/lib/galaxy/datatypes/display_applications/configs/igb/bedgraph.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/igb 2026-04-09T21:16:16,406 copying build/lib/galaxy/datatypes/display_applications/configs/igb/bb.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/igb 2026-04-09T21:16:16,408 copying build/lib/galaxy/datatypes/display_applications/configs/igb/wig.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/igb 2026-04-09T21:16:16,410 copying build/lib/galaxy/datatypes/display_applications/configs/igb/cram.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/igb 2026-04-09T21:16:16,411 copying build/lib/galaxy/datatypes/display_applications/configs/igb/gtf.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/igb 2026-04-09T21:16:16,413 copying build/lib/galaxy/datatypes/display_applications/configs/igb/bam.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/igb 2026-04-09T21:16:16,415 copying build/lib/galaxy/datatypes/display_applications/configs/igb/bed.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/igb 2026-04-09T21:16:16,417 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/display_applications/configs/icn3d 2026-04-09T21:16:16,419 copying build/lib/galaxy/datatypes/display_applications/configs/icn3d/icn3d_simple.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/display_applications/configs/icn3d 2026-04-09T21:16:16,421 copying build/lib/galaxy/datatypes/data.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,424 copying build/lib/galaxy/datatypes/interval.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,427 copying build/lib/galaxy/datatypes/genetics.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,430 copying build/lib/galaxy/datatypes/__init__.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,432 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/util 2026-04-09T21:16:16,433 copying build/lib/galaxy/datatypes/util/gff_util.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/util 2026-04-09T21:16:16,436 copying build/lib/galaxy/datatypes/util/__init__.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/util 2026-04-09T21:16:16,438 copying build/lib/galaxy/datatypes/util/maf_utilities.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/util 2026-04-09T21:16:16,440 copying build/lib/galaxy/datatypes/util/generic_util.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/util 2026-04-09T21:16:16,442 copying build/lib/galaxy/datatypes/set_metadata_tool.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,444 copying build/lib/galaxy/datatypes/qualityscore.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,446 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/dataproviders 2026-04-09T21:16:16,447 copying build/lib/galaxy/datatypes/dataproviders/__init__.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/dataproviders 2026-04-09T21:16:16,449 copying build/lib/galaxy/datatypes/dataproviders/exceptions.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/dataproviders 2026-04-09T21:16:16,451 copying build/lib/galaxy/datatypes/dataproviders/decorators.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/dataproviders 2026-04-09T21:16:16,453 copying build/lib/galaxy/datatypes/dataproviders/dataset.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/dataproviders 2026-04-09T21:16:16,456 copying build/lib/galaxy/datatypes/dataproviders/external.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/dataproviders 2026-04-09T21:16:16,458 copying build/lib/galaxy/datatypes/dataproviders/column.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/dataproviders 2026-04-09T21:16:16,460 copying build/lib/galaxy/datatypes/dataproviders/hierarchy.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/dataproviders 2026-04-09T21:16:16,463 copying build/lib/galaxy/datatypes/dataproviders/base.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/dataproviders 2026-04-09T21:16:16,465 copying build/lib/galaxy/datatypes/dataproviders/line.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/dataproviders 2026-04-09T21:16:16,467 copying build/lib/galaxy/datatypes/dataproviders/chunk.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/dataproviders 2026-04-09T21:16:16,469 copying build/lib/galaxy/datatypes/protocols.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,473 creating build/bdist.linux-armv7l/wheel/galaxy/datatypes/converters 2026-04-09T21:16:16,474 copying build/lib/galaxy/datatypes/converters/cram_to_bam_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,476 copying build/lib/galaxy/datatypes/converters/parquet_to_csv_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,478 copying build/lib/galaxy/datatypes/converters/pbed_ldreduced_converter.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,480 copying build/lib/galaxy/datatypes/converters/biom.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,482 copying build/lib/galaxy/datatypes/converters/interval_to_bed6_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,484 copying build/lib/galaxy/datatypes/converters/wiggle_to_simple_converter.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,486 copying build/lib/galaxy/datatypes/converters/bcf_bcf_uncompressed_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,488 copying build/lib/galaxy/datatypes/converters/__init__.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,489 copying build/lib/galaxy/datatypes/converters/fasta_to_bowtie_color_index_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,491 copying build/lib/galaxy/datatypes/converters/inchi_to_mol_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,493 copying build/lib/galaxy/datatypes/converters/smi_to_smi_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,495 copying build/lib/galaxy/datatypes/converters/sam_to_unsorted_bam.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,496 copying build/lib/galaxy/datatypes/converters/vcf_to_interval_index_converter.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,498 copying build/lib/galaxy/datatypes/converters/lped_to_fped_converter.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,500 copying build/lib/galaxy/datatypes/converters/len_to_linecount.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,501 copying build/lib/galaxy/datatypes/converters/mol2_to_mol_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,503 copying build/lib/galaxy/datatypes/converters/gff_to_bed_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,505 copying build/lib/galaxy/datatypes/converters/picard_interval_list_to_bed6_converter.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,506 copying build/lib/galaxy/datatypes/converters/bed_to_gff_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,508 copying build/lib/galaxy/datatypes/converters/fasta_to_tabular_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,510 copying build/lib/galaxy/datatypes/converters/archive_to_directory.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,512 copying build/lib/galaxy/datatypes/converters/neostorezip_to_neostore_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,514 copying build/lib/galaxy/datatypes/converters/ref_to_seq_taxonomy_converter.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,515 copying build/lib/galaxy/datatypes/converters/bed_gff_or_vcf_to_bigwig_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,517 copying build/lib/galaxy/datatypes/converters/vcf_bgzip_to_tabix_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,519 copying build/lib/galaxy/datatypes/converters/interval_to_interval_index_converter.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,521 copying build/lib/galaxy/datatypes/converters/uncompressed_to_gz.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,523 copying build/lib/galaxy/datatypes/converters/maf_to_fasta_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,524 copying build/lib/galaxy/datatypes/converters/pbed_ldreduced_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,526 copying build/lib/galaxy/datatypes/converters/vcf_to_interval_index_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,528 copying build/lib/galaxy/datatypes/converters/pbed_to_lped_converter.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,530 copying build/lib/galaxy/datatypes/converters/bed_to_gff_converter.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,532 copying build/lib/galaxy/datatypes/converters/tabular_to_csv.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,534 copying build/lib/galaxy/datatypes/converters/fastqsolexa_to_fasta_converter.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,536 copying build/lib/galaxy/datatypes/converters/bed_to_fli_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,537 copying build/lib/galaxy/datatypes/converters/to_qname_sorted_bam.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,539 copying build/lib/galaxy/datatypes/converters/bz2_to_uncompressed.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,541 copying build/lib/galaxy/datatypes/converters/mdconvert.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,542 copying build/lib/galaxy/datatypes/converters/sam_to_bigwig_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,544 copying build/lib/galaxy/datatypes/converters/bigbed_to_bed_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,546 copying build/lib/galaxy/datatypes/converters/interval_to_bed_converter.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,548 copying build/lib/galaxy/datatypes/converters/ref_to_seq_taxonomy_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,550 copying build/lib/galaxy/datatypes/converters/maf_to_interval_converter.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,551 copying build/lib/galaxy/datatypes/converters/pileup_to_interval_index_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,553 copying build/lib/galaxy/datatypes/converters/cml_to_smi_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,555 copying build/lib/galaxy/datatypes/converters/gro_to_pdb.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,557 copying build/lib/galaxy/datatypes/converters/gff_to_interval_index_converter.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,558 copying build/lib/galaxy/datatypes/converters/fasta_to_2bit.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,560 copying build/lib/galaxy/datatypes/converters/tar_to_directory.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,562 copying build/lib/galaxy/datatypes/converters/gff_to_bed_converter.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,564 copying build/lib/galaxy/datatypes/converters/parquet_to_csv_converter.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,566 copying build/lib/galaxy/datatypes/converters/pdb_to_gro.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,567 copying build/lib/galaxy/datatypes/converters/molecules_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,570 copying build/lib/galaxy/datatypes/converters/fasta_to_bowtie_base_index_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,572 copying build/lib/galaxy/datatypes/converters/interval_to_bed12_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,574 copying build/lib/galaxy/datatypes/converters/lped_to_pbed_converter.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,576 copying build/lib/galaxy/datatypes/converters/tabular_to_dbnsfp.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,577 copying build/lib/galaxy/datatypes/converters/bam_to_bai.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,579 copying build/lib/galaxy/datatypes/converters/pbed_to_lped_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,581 copying build/lib/galaxy/datatypes/converters/wig_to_bigwig_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,582 copying build/lib/galaxy/datatypes/converters/gff_to_fli_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,584 copying build/lib/galaxy/datatypes/converters/bigwig_to_wig_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,586 copying build/lib/galaxy/datatypes/converters/maf_to_fasta_converter.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,587 copying build/lib/galaxy/datatypes/converters/wiggle_to_simple_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,589 copying build/lib/galaxy/datatypes/converters/fastqsolexa_to_fasta_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,591 copying build/lib/galaxy/datatypes/converters/interval_to_fli.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,593 copying build/lib/galaxy/datatypes/converters/to_coordinate_sorted_bam.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,595 copying build/lib/galaxy/datatypes/converters/gz_to_uncompressed.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,596 copying build/lib/galaxy/datatypes/converters/pileup_to_interval_index_converter.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,598 copying build/lib/galaxy/datatypes/converters/tabular_csv.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,600 copying build/lib/galaxy/datatypes/converters/interval_to_bedstrict_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,601 copying build/lib/galaxy/datatypes/converters/csv_to_tabular.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,604 copying build/lib/galaxy/datatypes/converters/fastqsolexa_to_qual_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,605 copying build/lib/galaxy/datatypes/converters/fastqsolexa_to_qual_converter.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,607 copying build/lib/galaxy/datatypes/converters/fasta_to_len.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,609 copying build/lib/galaxy/datatypes/converters/bam_to_bigwig_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,611 copying build/lib/galaxy/datatypes/converters/interval_to_interval_index_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,613 copying build/lib/galaxy/datatypes/converters/interval_to_bedstrict_converter.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,615 copying build/lib/galaxy/datatypes/converters/fasta_to_len.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,617 copying build/lib/galaxy/datatypes/converters/gff_to_interval_index_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,619 copying build/lib/galaxy/datatypes/converters/fastq_to_fqtoc.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,620 copying build/lib/galaxy/datatypes/converters/fasta_to_tabular_converter.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,622 copying build/lib/galaxy/datatypes/converters/fastq_to_fqtoc.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,624 copying build/lib/galaxy/datatypes/converters/fasta_to_fai.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,626 copying build/lib/galaxy/datatypes/converters/interval_to_bgzip_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,628 copying build/lib/galaxy/datatypes/converters/vcf_to_vcf_bgzip_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,630 copying build/lib/galaxy/datatypes/converters/interval_to_bed_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,631 copying build/lib/galaxy/datatypes/converters/smi_to_mol_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,633 copying build/lib/galaxy/datatypes/converters/maf_to_interval_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,635 copying build/lib/galaxy/datatypes/converters/picard_interval_list_to_bed6_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,637 copying build/lib/galaxy/datatypes/converters/interval_to_tabix_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,638 copying build/lib/galaxy/datatypes/converters/bedgraph_to_bigwig_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,640 copying build/lib/galaxy/datatypes/converters/lped_to_pbed_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,642 copying build/lib/galaxy/datatypes/converters/interval_to_bigwig_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,644 copying build/lib/galaxy/datatypes/converters/lped_to_fped_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,646 copying build/lib/galaxy/datatypes/converters/bed_to_interval_index_converter.xml -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes/converters 2026-04-09T21:16:16,647 copying build/lib/galaxy/datatypes/_schema.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,649 copying build/lib/galaxy/datatypes/tracks.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,651 copying build/lib/galaxy/datatypes/constructive_solid_geometry.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,654 copying build/lib/galaxy/datatypes/microarrays.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,656 copying build/lib/galaxy/datatypes/triples.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,658 copying build/lib/galaxy/datatypes/text.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,661 copying build/lib/galaxy/datatypes/msa.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,663 copying build/lib/galaxy/datatypes/xml.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,666 copying build/lib/galaxy/datatypes/sniff.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,668 copying build/lib/galaxy/datatypes/spaln.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,671 copying build/lib/galaxy/datatypes/images.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,673 copying build/lib/galaxy/datatypes/anvio.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,676 copying build/lib/galaxy/datatypes/registry.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,679 copying build/lib/galaxy/datatypes/plant_tribes.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,681 copying build/lib/galaxy/datatypes/larch.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,684 copying build/lib/galaxy/datatypes/hdf5.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,685 copying build/lib/galaxy/datatypes/proteomics.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,688 copying build/lib/galaxy/datatypes/metadata.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,690 copying build/lib/galaxy/datatypes/coverage.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,691 copying build/lib/galaxy/datatypes/isa.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,694 copying build/lib/galaxy/datatypes/gis.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,696 copying build/lib/galaxy/datatypes/ngsindex.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,698 copying build/lib/galaxy/datatypes/binary.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,703 copying build/lib/galaxy/datatypes/neo4j.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,705 copying build/lib/galaxy/datatypes/tabular.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,708 copying build/lib/galaxy/datatypes/sequence.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,712 copying build/lib/galaxy/datatypes/graph.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,714 copying build/lib/galaxy/datatypes/upload_util.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,716 copying build/lib/galaxy/datatypes/blast.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,719 copying build/lib/galaxy/datatypes/chrominfo.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,721 copying build/lib/galaxy/datatypes/molecules.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,724 copying build/lib/galaxy/datatypes/chain.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,726 copying build/lib/galaxy/datatypes/qiime2.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,728 copying build/lib/galaxy/datatypes/phylip.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,731 copying build/lib/galaxy/datatypes/annotation.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,733 copying build/lib/galaxy/datatypes/speech.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,735 copying build/lib/galaxy/datatypes/metacyto.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,736 copying build/lib/galaxy/datatypes/assembly.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,739 copying build/lib/galaxy/datatypes/checkers.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,741 copying build/lib/galaxy/datatypes/goldenpath.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,743 copying build/lib/galaxy/datatypes/media.py -> build/bdist.linux-armv7l/wheel/./galaxy/datatypes 2026-04-09T21:16:16,746 running install_egg_info 2026-04-09T21:16:16,750 Copying galaxy_data.egg-info to build/bdist.linux-armv7l/wheel/./galaxy_data-26.0.1.dev0-py3.11.egg-info 2026-04-09T21:16:16,763 running install_scripts 2026-04-09T21:16:16,775 creating build/bdist.linux-armv7l/wheel/galaxy_data-26.0.1.dev0.dist-info/WHEEL 2026-04-09T21:16:16,778 creating '/tmp/pip-wheel-ku1zw1p4/.tmp-mwcz_vbq/galaxy_data-26.0.1.dev0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-04-09T21:16:16,780 adding 'galaxy/__init__.py' 2026-04-09T21:16:16,782 adding 'galaxy/py.typed' 2026-04-09T21:16:16,784 adding 'galaxy/datatypes/__init__.py' 2026-04-09T21:16:16,786 adding 'galaxy/datatypes/_schema.py' 2026-04-09T21:16:16,787 adding 'galaxy/datatypes/annotation.py' 2026-04-09T21:16:16,789 adding 'galaxy/datatypes/anvio.py' 2026-04-09T21:16:16,791 adding 'galaxy/datatypes/assembly.py' 2026-04-09T21:16:16,809 adding 'galaxy/datatypes/binary.py' 2026-04-09T21:16:16,813 adding 'galaxy/datatypes/blast.py' 2026-04-09T21:16:16,814 adding 'galaxy/datatypes/chain.py' 2026-04-09T21:16:16,816 adding 'galaxy/datatypes/checkers.py' 2026-04-09T21:16:16,817 adding 'galaxy/datatypes/chrominfo.py' 2026-04-09T21:16:16,821 adding 'galaxy/datatypes/constructive_solid_geometry.py' 2026-04-09T21:16:16,822 adding 'galaxy/datatypes/coverage.py' 2026-04-09T21:16:16,830 adding 'galaxy/datatypes/data.py' 2026-04-09T21:16:16,832 adding 'galaxy/datatypes/flow.py' 2026-04-09T21:16:16,836 adding 'galaxy/datatypes/genetics.py' 2026-04-09T21:16:16,838 adding 'galaxy/datatypes/gis.py' 2026-04-09T21:16:16,840 adding 'galaxy/datatypes/goldenpath.py' 2026-04-09T21:16:16,842 adding 'galaxy/datatypes/graph.py' 2026-04-09T21:16:16,843 adding 'galaxy/datatypes/hdf5.py' 2026-04-09T21:16:16,847 adding 'galaxy/datatypes/images.py' 2026-04-09T21:16:16,855 adding 'galaxy/datatypes/interval.py' 2026-04-09T21:16:16,857 adding 'galaxy/datatypes/isa.py' 2026-04-09T21:16:16,859 adding 'galaxy/datatypes/larch.py' 2026-04-09T21:16:16,861 adding 'galaxy/datatypes/media.py' 2026-04-09T21:16:16,862 adding 'galaxy/datatypes/metacyto.py' 2026-04-09T21:16:16,863 adding 'galaxy/datatypes/metadata.py' 2026-04-09T21:16:16,865 adding 'galaxy/datatypes/microarrays.py' 2026-04-09T21:16:16,870 adding 'galaxy/datatypes/molecules.py' 2026-04-09T21:16:16,873 adding 'galaxy/datatypes/mothur.py' 2026-04-09T21:16:16,875 adding 'galaxy/datatypes/msa.py' 2026-04-09T21:16:16,877 adding 'galaxy/datatypes/neo4j.py' 2026-04-09T21:16:16,878 adding 'galaxy/datatypes/ngsindex.py' 2026-04-09T21:16:16,880 adding 'galaxy/datatypes/phylip.py' 2026-04-09T21:16:16,881 adding 'galaxy/datatypes/plant_tribes.py' 2026-04-09T21:16:16,885 adding 'galaxy/datatypes/proteomics.py' 2026-04-09T21:16:16,887 adding 'galaxy/datatypes/protocols.py' 2026-04-09T21:16:16,889 adding 'galaxy/datatypes/qiime2.py' 2026-04-09T21:16:16,890 adding 'galaxy/datatypes/qualityscore.py' 2026-04-09T21:16:16,896 adding 'galaxy/datatypes/registry.py' 2026-04-09T21:16:16,902 adding 'galaxy/datatypes/sequence.py' 2026-04-09T21:16:16,904 adding 'galaxy/datatypes/set_metadata_tool.xml' 2026-04-09T21:16:16,908 adding 'galaxy/datatypes/sniff.py' 2026-04-09T21:16:16,910 adding 'galaxy/datatypes/spaln.py' 2026-04-09T21:16:16,911 adding 'galaxy/datatypes/speech.py' 2026-04-09T21:16:16,920 adding 'galaxy/datatypes/tabular.py' 2026-04-09T21:16:16,926 adding 'galaxy/datatypes/text.py' 2026-04-09T21:16:16,927 adding 'galaxy/datatypes/tracks.py' 2026-04-09T21:16:16,929 adding 'galaxy/datatypes/triples.py' 2026-04-09T21:16:16,930 adding 'galaxy/datatypes/upload_util.py' 2026-04-09T21:16:16,932 adding 'galaxy/datatypes/xml.py' 2026-04-09T21:16:16,935 adding 'galaxy/datatypes/converters/__init__.py' 2026-04-09T21:16:16,937 adding 'galaxy/datatypes/converters/archive_to_directory.xml' 2026-04-09T21:16:16,938 adding 'galaxy/datatypes/converters/bam_to_bai.xml' 2026-04-09T21:16:16,939 adding 'galaxy/datatypes/converters/bam_to_bigwig_converter.xml' 2026-04-09T21:16:16,941 adding 'galaxy/datatypes/converters/bcf_bcf_uncompressed_converter.xml' 2026-04-09T21:16:16,942 adding 'galaxy/datatypes/converters/bed_gff_or_vcf_to_bigwig_converter.xml' 2026-04-09T21:16:16,943 adding 'galaxy/datatypes/converters/bed_to_fli_converter.xml' 2026-04-09T21:16:16,945 adding 'galaxy/datatypes/converters/bed_to_gff_converter.py' 2026-04-09T21:16:16,946 adding 'galaxy/datatypes/converters/bed_to_gff_converter.xml' 2026-04-09T21:16:16,947 adding 'galaxy/datatypes/converters/bed_to_interval_index_converter.xml' 2026-04-09T21:16:16,948 adding 'galaxy/datatypes/converters/bedgraph_to_bigwig_converter.xml' 2026-04-09T21:16:16,950 adding 'galaxy/datatypes/converters/bigbed_to_bed_converter.xml' 2026-04-09T21:16:16,951 adding 'galaxy/datatypes/converters/bigwig_to_wig_converter.xml' 2026-04-09T21:16:16,953 adding 'galaxy/datatypes/converters/biom.xml' 2026-04-09T21:16:16,954 adding 'galaxy/datatypes/converters/bz2_to_uncompressed.xml' 2026-04-09T21:16:16,955 adding 'galaxy/datatypes/converters/cml_to_smi_converter.xml' 2026-04-09T21:16:16,956 adding 'galaxy/datatypes/converters/cram_to_bam_converter.xml' 2026-04-09T21:16:16,957 adding 'galaxy/datatypes/converters/csv_to_tabular.xml' 2026-04-09T21:16:16,959 adding 'galaxy/datatypes/converters/fasta_to_2bit.xml' 2026-04-09T21:16:16,960 adding 'galaxy/datatypes/converters/fasta_to_bowtie_base_index_converter.xml' 2026-04-09T21:16:16,961 adding 'galaxy/datatypes/converters/fasta_to_bowtie_color_index_converter.xml' 2026-04-09T21:16:16,962 adding 'galaxy/datatypes/converters/fasta_to_fai.xml' 2026-04-09T21:16:16,963 adding 'galaxy/datatypes/converters/fasta_to_len.py' 2026-04-09T21:16:16,965 adding 'galaxy/datatypes/converters/fasta_to_len.xml' 2026-04-09T21:16:16,966 adding 'galaxy/datatypes/converters/fasta_to_tabular_converter.py' 2026-04-09T21:16:16,967 adding 'galaxy/datatypes/converters/fasta_to_tabular_converter.xml' 2026-04-09T21:16:16,969 adding 'galaxy/datatypes/converters/fastq_to_fqtoc.py' 2026-04-09T21:16:16,970 adding 'galaxy/datatypes/converters/fastq_to_fqtoc.xml' 2026-04-09T21:16:16,971 adding 'galaxy/datatypes/converters/fastqsolexa_to_fasta_converter.py' 2026-04-09T21:16:16,972 adding 'galaxy/datatypes/converters/fastqsolexa_to_fasta_converter.xml' 2026-04-09T21:16:16,973 adding 'galaxy/datatypes/converters/fastqsolexa_to_qual_converter.py' 2026-04-09T21:16:16,975 adding 'galaxy/datatypes/converters/fastqsolexa_to_qual_converter.xml' 2026-04-09T21:16:16,976 adding 'galaxy/datatypes/converters/gff_to_bed_converter.py' 2026-04-09T21:16:16,977 adding 'galaxy/datatypes/converters/gff_to_bed_converter.xml' 2026-04-09T21:16:16,978 adding 'galaxy/datatypes/converters/gff_to_fli_converter.xml' 2026-04-09T21:16:16,980 adding 'galaxy/datatypes/converters/gff_to_interval_index_converter.py' 2026-04-09T21:16:16,981 adding 'galaxy/datatypes/converters/gff_to_interval_index_converter.xml' 2026-04-09T21:16:16,982 adding 'galaxy/datatypes/converters/gro_to_pdb.xml' 2026-04-09T21:16:16,983 adding 'galaxy/datatypes/converters/gz_to_uncompressed.xml' 2026-04-09T21:16:16,985 adding 'galaxy/datatypes/converters/inchi_to_mol_converter.xml' 2026-04-09T21:16:16,986 adding 'galaxy/datatypes/converters/interval_to_bed12_converter.xml' 2026-04-09T21:16:16,987 adding 'galaxy/datatypes/converters/interval_to_bed6_converter.xml' 2026-04-09T21:16:16,989 adding 'galaxy/datatypes/converters/interval_to_bed_converter.py' 2026-04-09T21:16:16,990 adding 'galaxy/datatypes/converters/interval_to_bed_converter.xml' 2026-04-09T21:16:16,992 adding 'galaxy/datatypes/converters/interval_to_bedstrict_converter.py' 2026-04-09T21:16:16,993 adding 'galaxy/datatypes/converters/interval_to_bedstrict_converter.xml' 2026-04-09T21:16:16,994 adding 'galaxy/datatypes/converters/interval_to_bgzip_converter.xml' 2026-04-09T21:16:16,996 adding 'galaxy/datatypes/converters/interval_to_bigwig_converter.xml' 2026-04-09T21:16:16,997 adding 'galaxy/datatypes/converters/interval_to_fli.py' 2026-04-09T21:16:16,998 adding 'galaxy/datatypes/converters/interval_to_interval_index_converter.py' 2026-04-09T21:16:17,000 adding 'galaxy/datatypes/converters/interval_to_interval_index_converter.xml' 2026-04-09T21:16:17,001 adding 'galaxy/datatypes/converters/interval_to_tabix_converter.xml' 2026-04-09T21:16:17,003 adding 'galaxy/datatypes/converters/len_to_linecount.xml' 2026-04-09T21:16:17,004 adding 'galaxy/datatypes/converters/lped_to_fped_converter.py' 2026-04-09T21:16:17,005 adding 'galaxy/datatypes/converters/lped_to_fped_converter.xml' 2026-04-09T21:16:17,007 adding 'galaxy/datatypes/converters/lped_to_pbed_converter.py' 2026-04-09T21:16:17,008 adding 'galaxy/datatypes/converters/lped_to_pbed_converter.xml' 2026-04-09T21:16:17,009 adding 'galaxy/datatypes/converters/maf_to_fasta_converter.py' 2026-04-09T21:16:17,011 adding 'galaxy/datatypes/converters/maf_to_fasta_converter.xml' 2026-04-09T21:16:17,012 adding 'galaxy/datatypes/converters/maf_to_interval_converter.py' 2026-04-09T21:16:17,013 adding 'galaxy/datatypes/converters/maf_to_interval_converter.xml' 2026-04-09T21:16:17,014 adding 'galaxy/datatypes/converters/mdconvert.xml' 2026-04-09T21:16:17,015 adding 'galaxy/datatypes/converters/mol2_to_mol_converter.xml' 2026-04-09T21:16:17,017 adding 'galaxy/datatypes/converters/molecules_converter.xml' 2026-04-09T21:16:17,018 adding 'galaxy/datatypes/converters/neostorezip_to_neostore_converter.xml' 2026-04-09T21:16:17,019 adding 'galaxy/datatypes/converters/parquet_to_csv_converter.py' 2026-04-09T21:16:17,020 adding 'galaxy/datatypes/converters/parquet_to_csv_converter.xml' 2026-04-09T21:16:17,022 adding 'galaxy/datatypes/converters/pbed_ldreduced_converter.py' 2026-04-09T21:16:17,023 adding 'galaxy/datatypes/converters/pbed_ldreduced_converter.xml' 2026-04-09T21:16:17,024 adding 'galaxy/datatypes/converters/pbed_to_lped_converter.py' 2026-04-09T21:16:17,025 adding 'galaxy/datatypes/converters/pbed_to_lped_converter.xml' 2026-04-09T21:16:17,027 adding 'galaxy/datatypes/converters/pdb_to_gro.xml' 2026-04-09T21:16:17,028 adding 'galaxy/datatypes/converters/picard_interval_list_to_bed6_converter.py' 2026-04-09T21:16:17,029 adding 'galaxy/datatypes/converters/picard_interval_list_to_bed6_converter.xml' 2026-04-09T21:16:17,030 adding 'galaxy/datatypes/converters/pileup_to_interval_index_converter.py' 2026-04-09T21:16:17,031 adding 'galaxy/datatypes/converters/pileup_to_interval_index_converter.xml' 2026-04-09T21:16:17,033 adding 'galaxy/datatypes/converters/ref_to_seq_taxonomy_converter.py' 2026-04-09T21:16:17,034 adding 'galaxy/datatypes/converters/ref_to_seq_taxonomy_converter.xml' 2026-04-09T21:16:17,035 adding 'galaxy/datatypes/converters/sam_to_bigwig_converter.xml' 2026-04-09T21:16:17,036 adding 'galaxy/datatypes/converters/sam_to_unsorted_bam.xml' 2026-04-09T21:16:17,038 adding 'galaxy/datatypes/converters/smi_to_mol_converter.xml' 2026-04-09T21:16:17,039 adding 'galaxy/datatypes/converters/smi_to_smi_converter.xml' 2026-04-09T21:16:17,040 adding 'galaxy/datatypes/converters/tabular_csv.py' 2026-04-09T21:16:17,041 adding 'galaxy/datatypes/converters/tabular_to_csv.xml' 2026-04-09T21:16:17,043 adding 'galaxy/datatypes/converters/tabular_to_dbnsfp.xml' 2026-04-09T21:16:17,044 adding 'galaxy/datatypes/converters/tar_to_directory.xml' 2026-04-09T21:16:17,045 adding 'galaxy/datatypes/converters/to_coordinate_sorted_bam.xml' 2026-04-09T21:16:17,047 adding 'galaxy/datatypes/converters/to_qname_sorted_bam.xml' 2026-04-09T21:16:17,048 adding 'galaxy/datatypes/converters/uncompressed_to_gz.xml' 2026-04-09T21:16:17,049 adding 'galaxy/datatypes/converters/vcf_bgzip_to_tabix_converter.xml' 2026-04-09T21:16:17,051 adding 'galaxy/datatypes/converters/vcf_to_interval_index_converter.py' 2026-04-09T21:16:17,052 adding 'galaxy/datatypes/converters/vcf_to_interval_index_converter.xml' 2026-04-09T21:16:17,053 adding 'galaxy/datatypes/converters/vcf_to_vcf_bgzip_converter.xml' 2026-04-09T21:16:17,054 adding 'galaxy/datatypes/converters/wig_to_bigwig_converter.xml' 2026-04-09T21:16:17,056 adding 'galaxy/datatypes/converters/wiggle_to_simple_converter.py' 2026-04-09T21:16:17,057 adding 'galaxy/datatypes/converters/wiggle_to_simple_converter.xml' 2026-04-09T21:16:17,059 adding 'galaxy/datatypes/dataproviders/__init__.py' 2026-04-09T21:16:17,061 adding 'galaxy/datatypes/dataproviders/base.py' 2026-04-09T21:16:17,062 adding 'galaxy/datatypes/dataproviders/chunk.py' 2026-04-09T21:16:17,065 adding 'galaxy/datatypes/dataproviders/column.py' 2026-04-09T21:16:17,068 adding 'galaxy/datatypes/dataproviders/dataset.py' 2026-04-09T21:16:17,070 adding 'galaxy/datatypes/dataproviders/decorators.py' 2026-04-09T21:16:17,071 adding 'galaxy/datatypes/dataproviders/exceptions.py' 2026-04-09T21:16:17,073 adding 'galaxy/datatypes/dataproviders/external.py' 2026-04-09T21:16:17,075 adding 'galaxy/datatypes/dataproviders/hierarchy.py' 2026-04-09T21:16:17,076 adding 'galaxy/datatypes/dataproviders/line.py' 2026-04-09T21:16:17,078 adding 'galaxy/datatypes/display_applications/__init__.py' 2026-04-09T21:16:17,080 adding 'galaxy/datatypes/display_applications/application.py' 2026-04-09T21:16:17,082 adding 'galaxy/datatypes/display_applications/parameters.py' 2026-04-09T21:16:17,083 adding 'galaxy/datatypes/display_applications/util.py' 2026-04-09T21:16:17,085 adding 'galaxy/datatypes/display_applications/configs/biom/biom_simple.xml' 2026-04-09T21:16:17,087 adding 'galaxy/datatypes/display_applications/configs/ensembl/ensembl_bam.xml' 2026-04-09T21:16:17,088 adding 'galaxy/datatypes/display_applications/configs/ensembl/ensembl_gff.xml' 2026-04-09T21:16:17,090 adding 'galaxy/datatypes/display_applications/configs/ensembl/ensembl_interval_as_bed.xml' 2026-04-09T21:16:17,091 adding 'galaxy/datatypes/display_applications/configs/gbrowse/gbrowse_gff.xml' 2026-04-09T21:16:17,093 adding 'galaxy/datatypes/display_applications/configs/gbrowse/gbrowse_interval_as_bed.xml' 2026-04-09T21:16:17,094 adding 'galaxy/datatypes/display_applications/configs/gbrowse/gbrowse_wig.xml' 2026-04-09T21:16:17,096 adding 'galaxy/datatypes/display_applications/configs/icn3d/icn3d_simple.xml' 2026-04-09T21:16:17,098 adding 'galaxy/datatypes/display_applications/configs/igb/bam.xml' 2026-04-09T21:16:17,099 adding 'galaxy/datatypes/display_applications/configs/igb/bb.xml' 2026-04-09T21:16:17,100 adding 'galaxy/datatypes/display_applications/configs/igb/bed.xml' 2026-04-09T21:16:17,101 adding 'galaxy/datatypes/display_applications/configs/igb/bedgraph.xml' 2026-04-09T21:16:17,102 adding 'galaxy/datatypes/display_applications/configs/igb/bigwig.xml' 2026-04-09T21:16:17,104 adding 'galaxy/datatypes/display_applications/configs/igb/cram.xml' 2026-04-09T21:16:17,105 adding 'galaxy/datatypes/display_applications/configs/igb/gtf.xml' 2026-04-09T21:16:17,106 adding 'galaxy/datatypes/display_applications/configs/igb/wig.xml' 2026-04-09T21:16:17,108 adding 'galaxy/datatypes/display_applications/configs/igv/bam.xml' 2026-04-09T21:16:17,110 adding 'galaxy/datatypes/display_applications/configs/igv/bigwig.xml' 2026-04-09T21:16:17,111 adding 'galaxy/datatypes/display_applications/configs/igv/genbank.xml' 2026-04-09T21:16:17,113 adding 'galaxy/datatypes/display_applications/configs/igv/genome_fasta.xml' 2026-04-09T21:16:17,114 adding 'galaxy/datatypes/display_applications/configs/igv/gff.xml' 2026-04-09T21:16:17,116 adding 'galaxy/datatypes/display_applications/configs/igv/interval_as_bed.xml' 2026-04-09T21:16:17,117 adding 'galaxy/datatypes/display_applications/configs/igv/vcf.xml' 2026-04-09T21:16:17,119 adding 'galaxy/datatypes/display_applications/configs/image/avivator.xml' 2026-04-09T21:16:17,121 adding 'galaxy/datatypes/display_applications/configs/intermine/intermine_simple.xml' 2026-04-09T21:16:17,122 adding 'galaxy/datatypes/display_applications/configs/iobio/bam.xml' 2026-04-09T21:16:17,123 adding 'galaxy/datatypes/display_applications/configs/iobio/vcf.xml' 2026-04-09T21:16:17,125 adding 'galaxy/datatypes/display_applications/configs/minerva/tabular.xml' 2026-04-09T21:16:17,127 adding 'galaxy/datatypes/display_applications/configs/qiime/qiime2/q2view.xml' 2026-04-09T21:16:17,129 adding 'galaxy/datatypes/display_applications/configs/rviewer/bed.xml' 2026-04-09T21:16:17,130 adding 'galaxy/datatypes/display_applications/configs/rviewer/vcf.xml' 2026-04-09T21:16:17,132 adding 'galaxy/datatypes/display_applications/configs/ucsc/bam.xml' 2026-04-09T21:16:17,134 adding 'galaxy/datatypes/display_applications/configs/ucsc/bigbed.xml' 2026-04-09T21:16:17,135 adding 'galaxy/datatypes/display_applications/configs/ucsc/bigwig.xml' 2026-04-09T21:16:17,136 adding 'galaxy/datatypes/display_applications/configs/ucsc/interval_as_bed.xml' 2026-04-09T21:16:17,137 adding 'galaxy/datatypes/display_applications/configs/ucsc/maf_customtrack.xml' 2026-04-09T21:16:17,139 adding 'galaxy/datatypes/display_applications/configs/ucsc/trackhub.xml' 2026-04-09T21:16:17,140 adding 'galaxy/datatypes/display_applications/configs/ucsc/vcf.xml' 2026-04-09T21:16:17,143 adding 'galaxy/datatypes/display_applications/xsd/geda.xsd' 2026-04-09T21:16:17,144 adding 'galaxy/datatypes/util/__init__.py' 2026-04-09T21:16:17,145 adding 'galaxy/datatypes/util/generic_util.py' 2026-04-09T21:16:17,148 adding 'galaxy/datatypes/util/gff_util.py' 2026-04-09T21:16:17,152 adding 'galaxy/datatypes/util/maf_utilities.py' 2026-04-09T21:16:17,209 adding 'galaxy/model/__init__.py' 2026-04-09T21:16:17,215 adding 'galaxy/model/base.py' 2026-04-09T21:16:17,217 adding 'galaxy/model/custom_types.py' 2026-04-09T21:16:17,218 adding 'galaxy/model/database_heartbeat.py' 2026-04-09T21:16:17,219 adding 'galaxy/model/database_object_names.py' 2026-04-09T21:16:17,221 adding 'galaxy/model/database_utils.py' 2026-04-09T21:16:17,223 adding 'galaxy/model/deferred.py' 2026-04-09T21:16:17,225 adding 'galaxy/model/dereference.py' 2026-04-09T21:16:17,227 adding 'galaxy/model/index_filter_util.py' 2026-04-09T21:16:17,228 adding 'galaxy/model/item_attrs.py' 2026-04-09T21:16:17,230 adding 'galaxy/model/keyset_token_pagination.py' 2026-04-09T21:16:17,231 adding 'galaxy/model/mapping.py' 2026-04-09T21:16:17,235 adding 'galaxy/model/metadata.py' 2026-04-09T21:16:17,236 adding 'galaxy/model/none_like.py' 2026-04-09T21:16:17,237 adding 'galaxy/model/scoped_session.py' 2026-04-09T21:16:17,248 adding 'galaxy/model/security.py' 2026-04-09T21:16:17,251 adding 'galaxy/model/tags.py' 2026-04-09T21:16:17,253 adding 'galaxy/model/dataset_collections/__init__.py' 2026-04-09T21:16:17,255 adding 'galaxy/model/dataset_collections/adapters.py' 2026-04-09T21:16:17,256 adding 'galaxy/model/dataset_collections/auto_identifiers.py' 2026-04-09T21:16:17,257 adding 'galaxy/model/dataset_collections/auto_pairing.py' 2026-04-09T21:16:17,259 adding 'galaxy/model/dataset_collections/builder.py' 2026-04-09T21:16:17,260 adding 'galaxy/model/dataset_collections/matching.py' 2026-04-09T21:16:17,262 adding 'galaxy/model/dataset_collections/query.py' 2026-04-09T21:16:17,263 adding 'galaxy/model/dataset_collections/registry.py' 2026-04-09T21:16:17,265 adding 'galaxy/model/dataset_collections/rule_target_columns.py' 2026-04-09T21:16:17,266 adding 'galaxy/model/dataset_collections/rule_target_models.py' 2026-04-09T21:16:17,268 adding 'galaxy/model/dataset_collections/rule_targets.yml' 2026-04-09T21:16:17,269 adding 'galaxy/model/dataset_collections/structure.py' 2026-04-09T21:16:17,271 adding 'galaxy/model/dataset_collections/subcollections.py' 2026-04-09T21:16:17,272 adding 'galaxy/model/dataset_collections/type_description.py' 2026-04-09T21:16:17,274 adding 'galaxy/model/dataset_collections/workbook_util.py' 2026-04-09T21:16:17,277 adding 'galaxy/model/dataset_collections/types/__init__.py' 2026-04-09T21:16:17,278 adding 'galaxy/model/dataset_collections/types/list.py' 2026-04-09T21:16:17,279 adding 'galaxy/model/dataset_collections/types/paired.py' 2026-04-09T21:16:17,280 adding 'galaxy/model/dataset_collections/types/paired_or_unpaired.py' 2026-04-09T21:16:17,282 adding 'galaxy/model/dataset_collections/types/record.py' 2026-04-09T21:16:17,283 adding 'galaxy/model/dataset_collections/types/sample_sheet.py' 2026-04-09T21:16:17,285 adding 'galaxy/model/dataset_collections/types/sample_sheet_util.py' 2026-04-09T21:16:17,288 adding 'galaxy/model/dataset_collections/types/sample_sheet_workbook.py' 2026-04-09T21:16:17,290 adding 'galaxy/model/dataset_collections/types/semantics.py' 2026-04-09T21:16:17,292 adding 'galaxy/model/db/__init__.py' 2026-04-09T21:16:17,293 adding 'galaxy/model/db/library.py' 2026-04-09T21:16:17,294 adding 'galaxy/model/db/role.py' 2026-04-09T21:16:17,296 adding 'galaxy/model/db/user.py' 2026-04-09T21:16:17,298 adding 'galaxy/model/migrations/README.md' 2026-04-09T21:16:17,300 adding 'galaxy/model/migrations/__init__.py' 2026-04-09T21:16:17,301 adding 'galaxy/model/migrations/alembic.ini' 2026-04-09T21:16:17,303 adding 'galaxy/model/migrations/base.py' 2026-04-09T21:16:17,305 adding 'galaxy/model/migrations/dbrevisions.py' 2026-04-09T21:16:17,306 adding 'galaxy/model/migrations/dbscript.py' 2026-04-09T21:16:17,307 adding 'galaxy/model/migrations/exceptions.py' 2026-04-09T21:16:17,309 adding 'galaxy/model/migrations/scripts.py' 2026-04-09T21:16:17,311 adding 'galaxy/model/migrations/util.py' 2026-04-09T21:16:17,313 adding 'galaxy/model/migrations/alembic/env.py' 2026-04-09T21:16:17,314 adding 'galaxy/model/migrations/alembic/script.py.mako' 2026-04-09T21:16:17,318 adding 'galaxy/model/migrations/alembic/versions_gxy/04288b6a5b25_make_dataset_uuids_unique.py' 2026-04-09T21:16:17,319 adding 'galaxy/model/migrations/alembic/versions_gxy/0c681a59dce1_add_on_delete_to_fkey_on_event_session_.py' 2026-04-09T21:16:17,320 adding 'galaxy/model/migrations/alembic/versions_gxy/13fe10b8e35b_add_not_null_constraints_to_user_group_.py' 2026-04-09T21:16:17,321 adding 'galaxy/model/migrations/alembic/versions_gxy/186d4835587b_drop_job_state_history_update_time_.py' 2026-04-09T21:16:17,323 adding 'galaxy/model/migrations/alembic/versions_gxy/1cf595475b58_email_column_unique_constraint.py' 2026-04-09T21:16:17,324 adding 'galaxy/model/migrations/alembic/versions_gxy/1d1d7bf6ac02_tool_request_implicit_outputs.py' 2026-04-09T21:16:17,325 adding 'galaxy/model/migrations/alembic/versions_gxy/1fdd615f2cdb_add_not_null_constraints_to_user_role_.py' 2026-04-09T21:16:17,326 adding 'galaxy/model/migrations/alembic/versions_gxy/23143e0bf1d8_add_doi_column_to_workflow_table.py' 2026-04-09T21:16:17,328 adding 'galaxy/model/migrations/alembic/versions_gxy/24feca8a6a5a_add_on_delete_to_fkey_on_user_action_.py' 2026-04-09T21:16:17,329 adding 'galaxy/model/migrations/alembic/versions_gxy/25b092f7938b_add_not_null_constraints_to_group_role_.py' 2026-04-09T21:16:17,330 adding 'galaxy/model/migrations/alembic/versions_gxy/2d749563e1fe_add_notification_system_tables.py' 2026-04-09T21:16:17,331 adding 'galaxy/model/migrations/alembic/versions_gxy/2dc3386d091f_add_indexes_for_workflow_comment_.py' 2026-04-09T21:16:17,333 adding 'galaxy/model/migrations/alembic/versions_gxy/303a5583a030_add_dispatched_column_to_notifications.py' 2026-04-09T21:16:17,334 adding 'galaxy/model/migrations/alembic/versions_gxy/3100452fa030_add_workflow_invocation_message_table.py' 2026-04-09T21:16:17,335 adding 'galaxy/model/migrations/alembic/versions_gxy/312602e3191d_add_workflow_step_id_path.py' 2026-04-09T21:16:17,336 adding 'galaxy/model/migrations/alembic/versions_gxy/3356bc2ecfc4_drop_view.py' 2026-04-09T21:16:17,338 adding 'galaxy/model/migrations/alembic/versions_gxy/338d0e5deb03_add_cleanup_event_user_assoc_table.py' 2026-04-09T21:16:17,339 adding 'galaxy/model/migrations/alembic/versions_gxy/349dd9d9aac9_add_unique_constraint_to_user_role_assoc.py' 2026-04-09T21:16:17,340 adding 'galaxy/model/migrations/alembic/versions_gxy/3a2914d703ca_add_index_wf_r_s_s__workflow_invocation_.py' 2026-04-09T21:16:17,341 adding 'galaxy/model/migrations/alembic/versions_gxy/3af58c192752_implement_sample_sheets.py' 2026-04-09T21:16:17,343 adding 'galaxy/model/migrations/alembic/versions_gxy/460d0ecd1dd8_.py' 2026-04-09T21:16:17,344 adding 'galaxy/model/migrations/alembic/versions_gxy/518c8438a91b_add_when_expression_column.py' 2026-04-09T21:16:17,345 adding 'galaxy/model/migrations/alembic/versions_gxy/55f02fd8ab6c_add_index_on_hda_extension.py' 2026-04-09T21:16:17,347 adding 'galaxy/model/migrations/alembic/versions_gxy/56ddf316dbd0_add_unique_constraint_to_user_group_.py' 2026-04-09T21:16:17,348 adding 'galaxy/model/migrations/alembic/versions_gxy/570bce1e82f9_drop_cloudauthz_table.py' 2026-04-09T21:16:17,349 adding 'galaxy/model/migrations/alembic/versions_gxy/5924fbf10430_add_galaxy_url_column_to_notifications.py' 2026-04-09T21:16:17,351 adding 'galaxy/model/migrations/alembic/versions_gxy/59e024ceaca1_add_export_association_table.py' 2026-04-09T21:16:17,352 adding 'galaxy/model/migrations/alembic/versions_gxy/63dc6cca023f_add_is_webapp_column_to_worker_process.py' 2026-04-09T21:16:17,353 adding 'galaxy/model/migrations/alembic/versions_gxy/6a67bf27e6a6_deferred_data_tables.py' 2026-04-09T21:16:17,354 adding 'galaxy/model/migrations/alembic/versions_gxy/71eeb8d91f92_workflow_readme.py' 2026-04-09T21:16:17,356 adding 'galaxy/model/migrations/alembic/versions_gxy/724237cc4cf0_migrate_custos_to_psa_tokens.py' 2026-04-09T21:16:17,357 adding 'galaxy/model/migrations/alembic/versions_gxy/75348cfb3715_.py' 2026-04-09T21:16:17,358 adding 'galaxy/model/migrations/alembic/versions_gxy/75b461a2b24a_merge_heads.py' 2026-04-09T21:16:17,359 adding 'galaxy/model/migrations/alembic/versions_gxy/7ffd33d5d144_implement_structured_tool_state.py' 2026-04-09T21:16:17,360 adding 'galaxy/model/migrations/alembic/versions_gxy/81362686fd64_add_origin_column_to_landing_requests.py' 2026-04-09T21:16:17,362 adding 'galaxy/model/migrations/alembic/versions_gxy/8a19186a6ee7_add_columns_to_interactivetool_entry_point.py' 2026-04-09T21:16:17,363 adding 'galaxy/model/migrations/alembic/versions_gxy/92fb564c7095_.py' 2026-04-09T21:16:17,364 adding 'galaxy/model/migrations/alembic/versions_gxy/9540a051226e_preferred_object_store_ids.py' 2026-04-09T21:16:17,365 adding 'galaxy/model/migrations/alembic/versions_gxy/98621a25ab75_merge_migration_heads.py' 2026-04-09T21:16:17,367 adding 'galaxy/model/migrations/alembic/versions_gxy/987ce9839ecb_create_celery_user_rate_limit_table.py' 2026-04-09T21:16:17,368 adding 'galaxy/model/migrations/alembic/versions_gxy/9930b68c85af_add_workflow_invocation_completion.py' 2026-04-09T21:16:17,369 adding 'galaxy/model/migrations/alembic/versions_gxy/9a5207190a4d_remove_unique_constraint_from_role_name.py' 2026-04-09T21:16:17,370 adding 'galaxy/model/migrations/alembic/versions_gxy/9ef6431f3a4e_add_unique_constraint_to_group_role_.py' 2026-04-09T21:16:17,372 adding 'galaxy/model/migrations/alembic/versions_gxy/a4c3ef999ab5_add_index_on_tool_id_column_of_job_table.py' 2026-04-09T21:16:17,373 adding 'galaxy/model/migrations/alembic/versions_gxy/a5c5455b849a_drop_job_params_column.py' 2026-04-09T21:16:17,374 adding 'galaxy/model/migrations/alembic/versions_gxy/a91ea1d97111_update_trigger_to_use_clock_timestamp_.py' 2026-04-09T21:16:17,375 adding 'galaxy/model/migrations/alembic/versions_gxy/a99a5b52ccb8_add_workflow_source_and_workflow_source_.py' 2026-04-09T21:16:17,377 adding 'galaxy/model/migrations/alembic/versions_gxy/b182f655505f_add_workflow_source_metadata_column.py' 2026-04-09T21:16:17,378 adding 'galaxy/model/migrations/alembic/versions_gxy/b855b714e8b8_make_api_keys_deleted_non_nullable.py' 2026-04-09T21:16:17,379 adding 'galaxy/model/migrations/alembic/versions_gxy/c0959ad462b2_add_tool_id_and_tool_version_to_tool_.py' 2026-04-09T21:16:17,380 adding 'galaxy/model/migrations/alembic/versions_gxy/c14a3c93d66a_add_user_defined_object_stores.py' 2026-04-09T21:16:17,382 adding 'galaxy/model/migrations/alembic/versions_gxy/c14a3c93d66b_add_user_defined_file_sources.py' 2026-04-09T21:16:17,383 adding 'galaxy/model/migrations/alembic/versions_gxy/c39f1de47a04_add_skipped_state_to_collection_job_.py' 2026-04-09T21:16:17,384 adding 'galaxy/model/migrations/alembic/versions_gxy/c44ae5f3dcf1_merge_25_0_into_dev.py' 2026-04-09T21:16:17,386 adding 'galaxy/model/migrations/alembic/versions_gxy/c63848676caf_update_username_column_schema_and_data.py' 2026-04-09T21:16:17,387 adding 'galaxy/model/migrations/alembic/versions_gxy/c716ee82337b_replace_triggers.py' 2026-04-09T21:16:17,388 adding 'galaxy/model/migrations/alembic/versions_gxy/c8c9bd29810d_add_user_credentials_table.py' 2026-04-09T21:16:17,390 adding 'galaxy/model/migrations/alembic/versions_gxy/caa7742f7bca_add_index_wf_r_i_p__workflow_invocation_.py' 2026-04-09T21:16:17,391 adding 'galaxy/model/migrations/alembic/versions_gxy/caeee878d7cd_add_on_delete_to_fkey_on_galaxy_session_.py' 2026-04-09T21:16:17,392 adding 'galaxy/model/migrations/alembic/versions_gxy/cbc46035eba0_chat_exchange_storage.py' 2026-04-09T21:16:17,393 adding 'galaxy/model/migrations/alembic/versions_gxy/cd26484899fb_add_job_credentials_context_association_.py' 2026-04-09T21:16:17,395 adding 'galaxy/model/migrations/alembic/versions_gxy/cde5d2db77e7_add_on_delete_to_fkey_on_job_session_id.py' 2026-04-09T21:16:17,396 adding 'galaxy/model/migrations/alembic/versions_gxy/d0583094c8cd_add_quota_source_labels.py' 2026-04-09T21:16:17,397 adding 'galaxy/model/migrations/alembic/versions_gxy/d2d8f51ebb7e_merge_uuid_migration_into_dev.py' 2026-04-09T21:16:17,398 adding 'galaxy/model/migrations/alembic/versions_gxy/d619fdfa6168_username_column_unique_constraint.py' 2026-04-09T21:16:17,399 adding 'galaxy/model/migrations/alembic/versions_gxy/ddbdbc40bdc1_add_workflow_comment_table.py' 2026-04-09T21:16:17,400 adding 'galaxy/model/migrations/alembic/versions_gxy/e0561d5fc8c7_add_archived_columns_to_history.py' 2026-04-09T21:16:17,402 adding 'galaxy/model/migrations/alembic/versions_gxy/e0e3bb173ee6_add_column_deleted_to_api_keys.py' 2026-04-09T21:16:17,403 adding 'galaxy/model/migrations/alembic/versions_gxy/e382f8eb5e12_create_landing_request_association_tables.py' 2026-04-09T21:16:17,404 adding 'galaxy/model/migrations/alembic/versions_gxy/e7b6dcb09efd_create_gxy_branch.py' 2026-04-09T21:16:17,406 adding 'galaxy/model/migrations/alembic/versions_gxy/e93c5d0b47a9_alter_column_external_user_id.py' 2026-04-09T21:16:17,407 adding 'galaxy/model/migrations/alembic/versions_gxy/ec25b23b08e2_implement_fixed_length_collections.py' 2026-04-09T21:16:17,408 adding 'galaxy/model/migrations/alembic/versions_gxy/eee9229a9765_.py' 2026-04-09T21:16:17,409 adding 'galaxy/model/migrations/alembic/versions_gxy/f070559879f1_create_user_dynamic_tool_association_.py' 2026-04-09T21:16:17,411 adding 'galaxy/model/migrations/alembic/versions_gxy/fb16d09348db_dataset_source_requested_transform.py' 2026-04-09T21:16:17,413 adding 'galaxy/model/migrations/alembic/versions_tsi/d4a650f47a3c_create_tsi_branch.py' 2026-04-09T21:16:17,414 adding 'galaxy/model/migrations/data_fixes/__init__.py' 2026-04-09T21:16:17,415 adding 'galaxy/model/migrations/data_fixes/association_table_fixer.py' 2026-04-09T21:16:17,417 adding 'galaxy/model/migrations/data_fixes/custos_to_psa.py' 2026-04-09T21:16:17,419 adding 'galaxy/model/migrations/data_fixes/user_table_fixer.py' 2026-04-09T21:16:17,420 adding 'galaxy/model/orm/__init__.py' 2026-04-09T21:16:17,422 adding 'galaxy/model/orm/engine_factory.py' 2026-04-09T21:16:17,423 adding 'galaxy/model/orm/now.py' 2026-04-09T21:16:17,425 adding 'galaxy/model/orm/scripts.py' 2026-04-09T21:16:17,426 adding 'galaxy/model/orm/util.py' 2026-04-09T21:16:17,428 adding 'galaxy/model/scripts/__init__.py' 2026-04-09T21:16:17,429 adding 'galaxy/model/scripts/delete_galaxy_sessions.py' 2026-04-09T21:16:17,430 adding 'galaxy/model/scripts/delete_job_metrics.py' 2026-04-09T21:16:17,432 adding 'galaxy/model/scripts/history_table_pruner.py' 2026-04-09T21:16:17,434 adding 'galaxy/model/scripts/prune_history_table.py' 2026-04-09T21:16:17,449 adding 'galaxy/model/store/__init__.py' 2026-04-09T21:16:17,451 adding 'galaxy/model/store/_bco_convert_utils.py' 2026-04-09T21:16:17,453 adding 'galaxy/model/store/build_objects.py' 2026-04-09T21:16:17,458 adding 'galaxy/model/store/discover.py' 2026-04-09T21:16:17,459 adding 'galaxy/model/store/load_objects.py' 2026-04-09T21:16:17,462 adding 'galaxy/model/store/ro_crate_utils.py' 2026-04-09T21:16:17,466 adding 'galaxy/model/tool_shed_install/__init__.py' 2026-04-09T21:16:17,467 adding 'galaxy/model/tool_shed_install/mapping.py' 2026-04-09T21:16:17,469 adding 'galaxy/model/triggers/__init__.py' 2026-04-09T21:16:17,471 adding 'galaxy/model/triggers/update_audit_table.py' 2026-04-09T21:16:17,472 adding 'galaxy/model/unittest_utils/__init__.py' 2026-04-09T21:16:17,474 adding 'galaxy/model/unittest_utils/beaker_testing_utils.py' 2026-04-09T21:16:17,475 adding 'galaxy/model/unittest_utils/data_app.py' 2026-04-09T21:16:17,477 adding 'galaxy/model/unittest_utils/db_helpers.py' 2026-04-09T21:16:17,478 adding 'galaxy/model/unittest_utils/migration_scripts_testing_utils.py' 2026-04-09T21:16:17,480 adding 'galaxy/model/unittest_utils/model_testing_utils.py' 2026-04-09T21:16:17,481 adding 'galaxy/model/unittest_utils/store_fixtures.py' 2026-04-09T21:16:17,483 adding 'galaxy/model/unittest_utils/utils.py' 2026-04-09T21:16:17,485 adding 'galaxy/quota/__init__.py' 2026-04-09T21:16:17,487 adding 'galaxy/quota/_schema.py' 2026-04-09T21:16:17,489 adding 'galaxy/security/__init__.py' 2026-04-09T21:16:17,490 adding 'galaxy/security/idencoding.py' 2026-04-09T21:16:17,492 adding 'galaxy/security/object_wrapper.py' 2026-04-09T21:16:17,494 adding 'galaxy/security/passwords.py' 2026-04-09T21:16:17,495 adding 'galaxy/security/ssh_util.py' 2026-04-09T21:16:17,497 adding 'galaxy/security/validate_user_input.py' 2026-04-09T21:16:17,499 adding 'galaxy/security/vault.py' 2026-04-09T21:16:17,501 adding 'galaxy_data-26.0.1.dev0.dist-info/licenses/LICENSE' 2026-04-09T21:16:17,510 adding 'galaxy_data-26.0.1.dev0.dist-info/METADATA' 2026-04-09T21:16:17,511 adding 'galaxy_data-26.0.1.dev0.dist-info/WHEEL' 2026-04-09T21:16:17,512 adding 'galaxy_data-26.0.1.dev0.dist-info/top_level.txt' 2026-04-09T21:16:17,519 adding 'galaxy_data-26.0.1.dev0.dist-info/RECORD' 2026-04-09T21:16:17,533 removing build/bdist.linux-armv7l/wheel 2026-04-09T21:16:17,718 Building wheel for galaxy-data (pyproject.toml): finished with status 'done' 2026-04-09T21:16:17,740 Created wheel for galaxy-data: filename=galaxy_data-26.0.1.dev0-py3-none-any.whl size=812398 sha256=b5f700b63ee7019f10a91e47b6d1ceed3e730a2849b9debc6a38110c2d6756b4 2026-04-09T21:16:17,741 Stored in directory: /tmp/pip-ephem-wheel-cache-etcz3t2y/wheels/84/ca/53/ee1d64d180e62682835364932d2b418d7ee89cab7c6fcae9bf 2026-04-09T21:16:17,781 Successfully built galaxy-data 2026-04-09T21:16:17,802 Removed build tracker: '/tmp/pip-build-tracker-4po19pae'