2026-04-11T16:38:27,728 Created temporary directory: /tmp/pip-ephem-wheel-cache-id1xmtz9 2026-04-11T16:38:27,730 Created temporary directory: /tmp/pip-build-tracker-7spad6at 2026-04-11T16:38:27,731 Initialized build tracking at /tmp/pip-build-tracker-7spad6at 2026-04-11T16:38:27,731 Created build tracker: /tmp/pip-build-tracker-7spad6at 2026-04-11T16:38:27,732 Entered build tracker: /tmp/pip-build-tracker-7spad6at 2026-04-11T16:38:27,732 Created temporary directory: /tmp/pip-wheel-wk8blpvt 2026-04-11T16:38:27,735 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-11T16:38:27,738 Created temporary directory: /tmp/pip-ephem-wheel-cache-9n0hxy0p 2026-04-11T16:38:27,759 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-11T16:38:27,762 2 location(s) to search for versions of ragbio: 2026-04-11T16:38:27,762 * https://pypi.org/simple/ragbio/ 2026-04-11T16:38:27,762 * https://www.piwheels.org/simple/ragbio/ 2026-04-11T16:38:27,763 Fetching project page and analyzing links: https://pypi.org/simple/ragbio/ 2026-04-11T16:38:27,764 Getting page https://pypi.org/simple/ragbio/ 2026-04-11T16:38:27,765 Found index url https://pypi.org/simple 2026-04-11T16:38:27,993 Fetched page https://pypi.org/simple/ragbio/ as application/vnd.pypi.simple.v1+json 2026-04-11T16:38:27,998 Skipping link: No binaries permitted for ragbio: https://files.pythonhosted.org/packages/49/ef/b76938c77f3c7b1ea66f2f25e49ae4b169e1f8050de61183a14e6ac4d4fe/ragbio-0.1.12-py3-none-any.whl (from https://pypi.org/simple/ragbio/) (requires-python:>=3.9) 2026-04-11T16:38:27,999 Found link https://files.pythonhosted.org/packages/34/53/62f7f4e6ea6e004f8ef0bcfe3006736331f55847fa6dea5ab395b84f1663/ragbio-0.1.12.tar.gz (from https://pypi.org/simple/ragbio/) (requires-python:>=3.9), version: 0.1.12 2026-04-11T16:38:28,000 Skipping link: No binaries permitted for ragbio: https://files.pythonhosted.org/packages/dc/24/2258809d9b74a8ca4f242fff2e0710b7bf4931298e52997448b7aa979848/ragbio-0.1.13-py3-none-any.whl (from https://pypi.org/simple/ragbio/) (requires-python:>=3.9) 2026-04-11T16:38:28,001 Found link https://files.pythonhosted.org/packages/88/6a/2ec5f1bd89c003be226c58beb02fac2d381fbf82e0431448569082feccf9/ragbio-0.1.13.tar.gz (from https://pypi.org/simple/ragbio/) (requires-python:>=3.9), version: 0.1.13 2026-04-11T16:38:28,001 Skipping link: No binaries permitted for ragbio: https://files.pythonhosted.org/packages/c7/a8/c7101107c29a737cc4ccca14f007fd24cb580c12efe4ab2cb20485ec68b5/ragbio-0.1.14-py3-none-any.whl (from https://pypi.org/simple/ragbio/) (requires-python:>=3.9) 2026-04-11T16:38:28,002 Found link https://files.pythonhosted.org/packages/65/46/d81d49123a6d72d33a8dc738cd291840dbb0364981934eed92b812593784/ragbio-0.1.14.tar.gz (from https://pypi.org/simple/ragbio/) (requires-python:>=3.9), version: 0.1.14 2026-04-11T16:38:28,003 Skipping link: No binaries permitted for ragbio: https://files.pythonhosted.org/packages/53/fc/e8d2981a19d57c4d3f6b02fb0d17894a566a27f823271a16f359590ca575/ragbio-0.1.15-py3-none-any.whl (from https://pypi.org/simple/ragbio/) (requires-python:>=3.9) 2026-04-11T16:38:28,004 Found link https://files.pythonhosted.org/packages/b2/6a/ce7400e812f3b729d6f96ee55e4be82e0dd7e94436eceb720202605d21c2/ragbio-0.1.15.tar.gz (from https://pypi.org/simple/ragbio/) (requires-python:>=3.9), version: 0.1.15 2026-04-11T16:38:28,005 Skipping link: No binaries permitted for ragbio: https://files.pythonhosted.org/packages/a7/3b/51d94164ad35f46f891a280570a132a1b2ce41b92213a3379b69491f2f88/ragbio-0.1.16-py3-none-any.whl (from https://pypi.org/simple/ragbio/) (requires-python:>=3.9) 2026-04-11T16:38:28,006 Found link https://files.pythonhosted.org/packages/26/55/7d03382697209683443eb141bf3c21588ebe369c159e06905f55542f2760/ragbio-0.1.16.tar.gz (from https://pypi.org/simple/ragbio/) (requires-python:>=3.9), version: 0.1.16 2026-04-11T16:38:28,007 Skipping link: No binaries permitted for ragbio: https://files.pythonhosted.org/packages/74/03/69e8d6eff4b946927ac368525c9e582f292b280caf1fb96e049c9c782eb0/ragbio-0.1.18-py3-none-any.whl (from https://pypi.org/simple/ragbio/) (requires-python:>=3.11) 2026-04-11T16:38:28,008 Found link https://files.pythonhosted.org/packages/04/1b/9277623cfdbcf56500c5eb16bd106aac8166b3cfdbafc603c4e43fe9037b/ragbio-0.1.18.tar.gz (from https://pypi.org/simple/ragbio/) (requires-python:>=3.11), version: 0.1.18 2026-04-11T16:38:28,008 Skipping link: No binaries permitted for ragbio: https://files.pythonhosted.org/packages/13/89/817fb58372af8de98089e95c0bc7e62836ff8b283bb3c643b9b95c7fe4f1/ragbio-0.1.19-py3-none-any.whl (from https://pypi.org/simple/ragbio/) (requires-python:>=3.11) 2026-04-11T16:38:28,009 Found link https://files.pythonhosted.org/packages/5e/8c/c2c03cb6a3389f09e82948dc501b8fe0d9e1d4201be245849cea108b5170/ragbio-0.1.19.tar.gz (from https://pypi.org/simple/ragbio/) (requires-python:>=3.11), version: 0.1.19 2026-04-11T16:38:28,010 Skipping link: No binaries permitted for ragbio: https://files.pythonhosted.org/packages/49/dd/c6f5be435b421e56629a776c577c254e7df3ad6611834a79c6316fcee623/ragbio-0.2.0-py3-none-any.whl (from https://pypi.org/simple/ragbio/) (requires-python:>=3.9) 2026-04-11T16:38:28,010 Found link https://files.pythonhosted.org/packages/fe/46/ff2fc5045df43573db716965a6da68f2b57ac8580a48fb653be837f562e6/ragbio-0.2.0.tar.gz (from https://pypi.org/simple/ragbio/) (requires-python:>=3.9), version: 0.2.0 2026-04-11T16:38:28,011 Skipping link: No binaries permitted for ragbio: https://files.pythonhosted.org/packages/28/c2/59f3446423af971cdf980f107bcb2cd6e78e1fe81d9a6079cf819ee20ffa/ragbio-2.0.1-py3-none-any.whl (from https://pypi.org/simple/ragbio/) (requires-python:>=3.11) 2026-04-11T16:38:28,012 Found link https://files.pythonhosted.org/packages/b4/a7/26c71fc43bf98b004b453f5c5cda94a91ab2363212e8b152b583579b1d17/ragbio-2.0.1.tar.gz (from https://pypi.org/simple/ragbio/) (requires-python:>=3.11), version: 2.0.1 2026-04-11T16:38:28,013 Skipping link: No binaries permitted for ragbio: https://files.pythonhosted.org/packages/b9/69/647c5c9bece7cde0cd7e5268e397e5dd7fbc540d1235b730195c269b1e97/ragbio-2.0.2-py3-none-any.whl (from https://pypi.org/simple/ragbio/) (requires-python:>=3.11) 2026-04-11T16:38:28,014 Found link https://files.pythonhosted.org/packages/6e/ac/338ef159055a621a2cc1cde044bf8867c7fe97dc808441cf6d367d947ae8/ragbio-2.0.2.tar.gz (from https://pypi.org/simple/ragbio/) (requires-python:>=3.11), version: 2.0.2 2026-04-11T16:38:28,015 Fetching project page and analyzing links: https://www.piwheels.org/simple/ragbio/ 2026-04-11T16:38:28,016 Getting page https://www.piwheels.org/simple/ragbio/ 2026-04-11T16:38:28,017 Found index url https://www.piwheels.org/simple 2026-04-11T16:38:28,192 Fetched page https://www.piwheels.org/simple/ragbio/ as text/html 2026-04-11T16:38:28,195 Skipping link: No binaries permitted for ragbio: https://archive1.piwheels.org/simple/ragbio/ragbio-2.0.1-py3-none-any.whl#sha256=ebc0571773bcf6e7fe57245944733d8f521c76b5d48d4f47d62a741f35d22b88 (from https://www.piwheels.org/simple/ragbio/) (requires-python:>=3.11) 2026-04-11T16:38:28,196 Skipping link: No binaries permitted for ragbio: https://archive1.piwheels.org/simple/ragbio/ragbio-0.2.0-py3-none-any.whl#sha256=e28b71bf95506762d0bf01cb5d29e25e0cf70da81a2021dfc23c5b4ac4bcca14 (from https://www.piwheels.org/simple/ragbio/) (requires-python:>=3.9) 2026-04-11T16:38:28,197 Skipping link: No binaries permitted for ragbio: https://archive1.piwheels.org/simple/ragbio/ragbio-0.1.18-py3-none-any.whl#sha256=ae4a0ea260253cca02d3a906ad7ba20f0ab310e31c89fbbb404747be738b8928 (from https://www.piwheels.org/simple/ragbio/) (requires-python:>=3.11) 2026-04-11T16:38:28,197 Skipping link: No binaries permitted for ragbio: https://archive1.piwheels.org/simple/ragbio/ragbio-0.1.16-py3-none-any.whl#sha256=d781caa34817f9d0f8a47fec3f0f2b5015b0586fe74e3d8f45e9d0b76636f8b7 (from https://www.piwheels.org/simple/ragbio/) (requires-python:>=3.9) 2026-04-11T16:38:28,198 Skipping link: No binaries permitted for ragbio: https://archive1.piwheels.org/simple/ragbio/ragbio-0.1.15-py3-none-any.whl#sha256=3ae98be8655aa5cd890af15b5bf3901b7ccc736fa1b76f4a4ff348439916e636 (from https://www.piwheels.org/simple/ragbio/) (requires-python:>=3.9) 2026-04-11T16:38:28,199 Skipping link: No binaries permitted for ragbio: https://archive1.piwheels.org/simple/ragbio/ragbio-0.1.14-py3-none-any.whl#sha256=d47c12cf3a49dcfab39564a7c345d8236e15c6aab1877957c897d7483cbf47f9 (from https://www.piwheels.org/simple/ragbio/) (requires-python:>=3.9) 2026-04-11T16:38:28,199 Skipping link: No binaries permitted for ragbio: https://archive1.piwheels.org/simple/ragbio/ragbio-0.1.13-py3-none-any.whl#sha256=912866e12d366e61f3649d8b9072c4b60371a424bb5c6890f10ca07a27263b17 (from https://www.piwheels.org/simple/ragbio/) (requires-python:>=3.9) 2026-04-11T16:38:28,200 Skipping link: No binaries permitted for ragbio: https://archive1.piwheels.org/simple/ragbio/ragbio-0.1.12-py3-none-any.whl#sha256=1342160fe2f337fa22045a27acec4b081fa922939b65d47324ece873fd3618be (from https://www.piwheels.org/simple/ragbio/) (requires-python:>=3.9) 2026-04-11T16:38:28,200 Skipping link: not a file: https://www.piwheels.org/simple/ragbio/ 2026-04-11T16:38:28,201 Skipping link: not a file: https://pypi.org/simple/ragbio/ 2026-04-11T16:38:28,221 Given no hashes to check 1 links for project 'ragbio': discarding no candidates 2026-04-11T16:38:28,241 Collecting ragbio==0.1.19 2026-04-11T16:38:28,244 Created temporary directory: /tmp/pip-unpack-zc_er6ci 2026-04-11T16:38:28,474 Downloading ragbio-0.1.19.tar.gz (194 kB) 2026-04-11T16:38:28,628 Added ragbio==0.1.19 from https://files.pythonhosted.org/packages/5e/8c/c2c03cb6a3389f09e82948dc501b8fe0d9e1d4201be245849cea108b5170/ragbio-0.1.19.tar.gz to build tracker '/tmp/pip-build-tracker-7spad6at' 2026-04-11T16:38:28,635 Created temporary directory: /tmp/pip-build-env-tj__f3jk 2026-04-11T16:38:28,639 Installing build dependencies: started 2026-04-11T16:38:28,640 Running command pip subprocess to install build dependencies 2026-04-11T16:38:29,800 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-04-11T16:38:30,238 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-11T16:38:30,261 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-11T16:38:32,058 Collecting setuptools>=61.0 2026-04-11T16:38:32,148 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-04-11T16:38:32,417 Collecting wheel 2026-04-11T16:38:32,438 Using cached https://www.piwheels.org/simple/wheel/wheel-0.46.3-py3-none-any.whl (30 kB) 2026-04-11T16:38:32,627 Collecting packaging>=24.0 2026-04-11T16:38:32,647 Using cached https://www.piwheels.org/simple/packaging/packaging-26.0-py3-none-any.whl (74 kB) 2026-04-11T16:38:35,585 Installing collected packages: setuptools, packaging, wheel 2026-04-11T16:38:38,972 Creating /tmp/pip-build-env-tj__f3jk/overlay/local/bin 2026-04-11T16:38:38,974 changing mode of /tmp/pip-build-env-tj__f3jk/overlay/local/bin/wheel to 755 2026-04-11T16:38:38,996 Successfully installed packaging-26.0 setuptools-82.0.1 wheel-0.46.3 2026-04-11T16:38:39,272 Installing build dependencies: finished with status 'done' 2026-04-11T16:38:39,279 Getting requirements to build wheel: started 2026-04-11T16:38:39,280 Running command Getting requirements to build wheel 2026-04-11T16:38:39,913 /tmp/pip-build-env-tj__f3jk/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-04-11T16:38:39,913 !! 2026-04-11T16:38:39,915 ******************************************************************************** 2026-04-11T16:38:39,915 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-04-11T16:38:39,916 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-04-11T16:38:39,916 or your builds will no longer be supported. 2026-04-11T16:38:39,917 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-11T16:38:39,918 ******************************************************************************** 2026-04-11T16:38:39,918 !! 2026-04-11T16:38:39,919 corresp(dist, value, root_dir) 2026-04-11T16:38:40,001 running egg_info 2026-04-11T16:38:40,007 writing ragbio.egg-info/PKG-INFO 2026-04-11T16:38:40,011 writing dependency_links to ragbio.egg-info/dependency_links.txt 2026-04-11T16:38:40,013 writing requirements to ragbio.egg-info/requires.txt 2026-04-11T16:38:40,015 writing top-level names to ragbio.egg-info/top_level.txt 2026-04-11T16:38:40,040 reading manifest file 'ragbio.egg-info/SOURCES.txt' 2026-04-11T16:38:40,043 reading manifest template 'MANIFEST.in' 2026-04-11T16:38:40,044 adding license file 'LICENSE' 2026-04-11T16:38:40,048 writing manifest file 'ragbio.egg-info/SOURCES.txt' 2026-04-11T16:38:40,144 Getting requirements to build wheel: finished with status 'done' 2026-04-11T16:38:40,148 Created temporary directory: /tmp/pip-modern-metadata-nmpzl0cm 2026-04-11T16:38:40,151 Preparing metadata (pyproject.toml): started 2026-04-11T16:38:40,153 Running command Preparing metadata (pyproject.toml) 2026-04-11T16:38:40,754 /tmp/pip-build-env-tj__f3jk/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-04-11T16:38:40,754 !! 2026-04-11T16:38:40,755 ******************************************************************************** 2026-04-11T16:38:40,756 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-04-11T16:38:40,757 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-04-11T16:38:40,758 or your builds will no longer be supported. 2026-04-11T16:38:40,759 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-11T16:38:40,759 ******************************************************************************** 2026-04-11T16:38:40,760 !! 2026-04-11T16:38:40,761 corresp(dist, value, root_dir) 2026-04-11T16:38:40,840 running dist_info 2026-04-11T16:38:40,850 creating /tmp/pip-modern-metadata-nmpzl0cm/ragbio.egg-info 2026-04-11T16:38:40,851 writing /tmp/pip-modern-metadata-nmpzl0cm/ragbio.egg-info/PKG-INFO 2026-04-11T16:38:40,855 writing dependency_links to /tmp/pip-modern-metadata-nmpzl0cm/ragbio.egg-info/dependency_links.txt 2026-04-11T16:38:40,857 writing requirements to /tmp/pip-modern-metadata-nmpzl0cm/ragbio.egg-info/requires.txt 2026-04-11T16:38:40,858 writing top-level names to /tmp/pip-modern-metadata-nmpzl0cm/ragbio.egg-info/top_level.txt 2026-04-11T16:38:40,859 writing manifest file '/tmp/pip-modern-metadata-nmpzl0cm/ragbio.egg-info/SOURCES.txt' 2026-04-11T16:38:40,881 reading manifest file '/tmp/pip-modern-metadata-nmpzl0cm/ragbio.egg-info/SOURCES.txt' 2026-04-11T16:38:40,883 reading manifest template 'MANIFEST.in' 2026-04-11T16:38:40,884 adding license file 'LICENSE' 2026-04-11T16:38:40,887 writing manifest file '/tmp/pip-modern-metadata-nmpzl0cm/ragbio.egg-info/SOURCES.txt' 2026-04-11T16:38:40,888 creating '/tmp/pip-modern-metadata-nmpzl0cm/ragbio-0.1.19.dist-info' 2026-04-11T16:38:41,008 Preparing metadata (pyproject.toml): finished with status 'done' 2026-04-11T16:38:41,014 Source in /tmp/pip-wheel-wk8blpvt/ragbio_7b37dff4a42a4625821f4b38eaa2cb40 has version 0.1.19, which satisfies requirement ragbio==0.1.19 from https://files.pythonhosted.org/packages/5e/8c/c2c03cb6a3389f09e82948dc501b8fe0d9e1d4201be245849cea108b5170/ragbio-0.1.19.tar.gz 2026-04-11T16:38:41,015 Removed ragbio==0.1.19 from https://files.pythonhosted.org/packages/5e/8c/c2c03cb6a3389f09e82948dc501b8fe0d9e1d4201be245849cea108b5170/ragbio-0.1.19.tar.gz from build tracker '/tmp/pip-build-tracker-7spad6at' 2026-04-11T16:38:41,021 Created temporary directory: /tmp/pip-unpack-w1zdo7ce 2026-04-11T16:38:41,021 Building wheels for collected packages: ragbio 2026-04-11T16:38:41,026 Created temporary directory: /tmp/pip-wheel-66l4wkza 2026-04-11T16:38:41,026 Destination directory: /tmp/pip-wheel-66l4wkza 2026-04-11T16:38:41,028 Building wheel for ragbio (pyproject.toml): started 2026-04-11T16:38:41,029 Running command Building wheel for ragbio (pyproject.toml) 2026-04-11T16:38:41,583 /tmp/pip-build-env-tj__f3jk/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-04-11T16:38:41,584 !! 2026-04-11T16:38:41,585 ******************************************************************************** 2026-04-11T16:38:41,585 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-04-11T16:38:41,586 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-04-11T16:38:41,587 or your builds will no longer be supported. 2026-04-11T16:38:41,588 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-11T16:38:41,588 ******************************************************************************** 2026-04-11T16:38:41,590 !! 2026-04-11T16:38:41,590 corresp(dist, value, root_dir) 2026-04-11T16:38:41,662 running bdist_wheel 2026-04-11T16:38:41,682 running build 2026-04-11T16:38:41,682 running build_py 2026-04-11T16:38:41,688 creating build/lib/ragbio 2026-04-11T16:38:41,691 copying ragbio/config.py -> build/lib/ragbio 2026-04-11T16:38:41,693 copying ragbio/__init__.py -> build/lib/ragbio 2026-04-11T16:38:41,695 creating build/lib/ragbio/utils 2026-04-11T16:38:41,696 copying ragbio/utils/rag_data_loader.py -> build/lib/ragbio/utils 2026-04-11T16:38:41,699 copying ragbio/utils/update_config.py -> build/lib/ragbio/utils 2026-04-11T16:38:41,701 copying ragbio/utils/__init__.py -> build/lib/ragbio/utils 2026-04-11T16:38:41,703 creating build/lib/ragbio/pipeline 2026-04-11T16:38:41,704 copying ragbio/pipeline/rag_pipeline.py -> build/lib/ragbio/pipeline 2026-04-11T16:38:41,707 copying ragbio/pipeline/__init__.py -> build/lib/ragbio/pipeline 2026-04-11T16:38:41,711 creating build/lib/ragbio/embeddings 2026-04-11T16:38:41,712 copying ragbio/embeddings/embedding_engine.py -> build/lib/ragbio/embeddings 2026-04-11T16:38:41,714 copying ragbio/embeddings/__init__.py -> build/lib/ragbio/embeddings 2026-04-11T16:38:41,716 creating build/lib/ragbio/knowledge_graph 2026-04-11T16:38:41,717 copying ragbio/knowledge_graph/structured_drug_kg.py -> build/lib/ragbio/knowledge_graph 2026-04-11T16:38:41,719 copying ragbio/knowledge_graph/__init__.py -> build/lib/ragbio/knowledge_graph 2026-04-11T16:38:41,721 running egg_info 2026-04-11T16:38:41,730 writing ragbio.egg-info/PKG-INFO 2026-04-11T16:38:41,734 writing dependency_links to ragbio.egg-info/dependency_links.txt 2026-04-11T16:38:41,735 writing requirements to ragbio.egg-info/requires.txt 2026-04-11T16:38:41,736 writing top-level names to ragbio.egg-info/top_level.txt 2026-04-11T16:38:41,753 reading manifest file 'ragbio.egg-info/SOURCES.txt' 2026-04-11T16:38:41,756 reading manifest template 'MANIFEST.in' 2026-04-11T16:38:41,757 adding license file 'LICENSE' 2026-04-11T16:38:41,761 writing manifest file 'ragbio.egg-info/SOURCES.txt' 2026-04-11T16:38:41,766 creating build/lib/ragbio/images 2026-04-11T16:38:41,767 copying ragbio/images/network_graph.png -> build/lib/ragbio/images 2026-04-11T16:38:41,783 installing to build/bdist.linux-armv7l/wheel 2026-04-11T16:38:41,784 running install 2026-04-11T16:38:41,806 running install_lib 2026-04-11T16:38:41,812 creating build/bdist.linux-armv7l/wheel 2026-04-11T16:38:41,814 creating build/bdist.linux-armv7l/wheel/ragbio 2026-04-11T16:38:41,816 creating build/bdist.linux-armv7l/wheel/ragbio/utils 2026-04-11T16:38:41,817 copying build/lib/ragbio/utils/rag_data_loader.py -> build/bdist.linux-armv7l/wheel/./ragbio/utils 2026-04-11T16:38:41,819 copying build/lib/ragbio/utils/update_config.py -> build/bdist.linux-armv7l/wheel/./ragbio/utils 2026-04-11T16:38:41,821 copying build/lib/ragbio/utils/__init__.py -> build/bdist.linux-armv7l/wheel/./ragbio/utils 2026-04-11T16:38:41,823 copying build/lib/ragbio/config.py -> build/bdist.linux-armv7l/wheel/./ragbio 2026-04-11T16:38:41,825 creating build/bdist.linux-armv7l/wheel/ragbio/pipeline 2026-04-11T16:38:41,826 copying build/lib/ragbio/pipeline/rag_pipeline.py -> build/bdist.linux-armv7l/wheel/./ragbio/pipeline 2026-04-11T16:38:41,829 copying build/lib/ragbio/pipeline/__init__.py -> build/bdist.linux-armv7l/wheel/./ragbio/pipeline 2026-04-11T16:38:41,831 creating build/bdist.linux-armv7l/wheel/ragbio/images 2026-04-11T16:38:41,832 copying build/lib/ragbio/images/network_graph.png -> build/bdist.linux-armv7l/wheel/./ragbio/images 2026-04-11T16:38:41,837 copying build/lib/ragbio/__init__.py -> build/bdist.linux-armv7l/wheel/./ragbio 2026-04-11T16:38:41,839 creating build/bdist.linux-armv7l/wheel/ragbio/embeddings 2026-04-11T16:38:41,840 copying build/lib/ragbio/embeddings/embedding_engine.py -> build/bdist.linux-armv7l/wheel/./ragbio/embeddings 2026-04-11T16:38:41,842 copying build/lib/ragbio/embeddings/__init__.py -> build/bdist.linux-armv7l/wheel/./ragbio/embeddings 2026-04-11T16:38:41,845 creating build/bdist.linux-armv7l/wheel/ragbio/knowledge_graph 2026-04-11T16:38:41,846 copying build/lib/ragbio/knowledge_graph/structured_drug_kg.py -> build/bdist.linux-armv7l/wheel/./ragbio/knowledge_graph 2026-04-11T16:38:41,848 copying build/lib/ragbio/knowledge_graph/__init__.py -> build/bdist.linux-armv7l/wheel/./ragbio/knowledge_graph 2026-04-11T16:38:41,849 running install_egg_info 2026-04-11T16:38:41,854 Copying ragbio.egg-info to build/bdist.linux-armv7l/wheel/./ragbio-0.1.19-py3.11.egg-info 2026-04-11T16:38:41,864 running install_scripts 2026-04-11T16:38:41,875 creating build/bdist.linux-armv7l/wheel/ragbio-0.1.19.dist-info/WHEEL 2026-04-11T16:38:41,878 creating '/tmp/pip-wheel-66l4wkza/.tmp-fojlmglp/ragbio-0.1.19-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-04-11T16:38:41,880 adding 'ragbio/__init__.py' 2026-04-11T16:38:41,882 adding 'ragbio/config.py' 2026-04-11T16:38:41,884 adding 'ragbio/embeddings/__init__.py' 2026-04-11T16:38:41,886 adding 'ragbio/embeddings/embedding_engine.py' 2026-04-11T16:38:41,904 adding 'ragbio/images/network_graph.png' 2026-04-11T16:38:41,907 adding 'ragbio/knowledge_graph/__init__.py' 2026-04-11T16:38:41,908 adding 'ragbio/knowledge_graph/structured_drug_kg.py' 2026-04-11T16:38:41,910 adding 'ragbio/pipeline/__init__.py' 2026-04-11T16:38:41,913 adding 'ragbio/pipeline/rag_pipeline.py' 2026-04-11T16:38:41,915 adding 'ragbio/utils/__init__.py' 2026-04-11T16:38:41,917 adding 'ragbio/utils/rag_data_loader.py' 2026-04-11T16:38:41,919 adding 'ragbio/utils/update_config.py' 2026-04-11T16:38:41,921 adding 'ragbio-0.1.19.dist-info/licenses/LICENSE' 2026-04-11T16:38:41,923 adding 'ragbio-0.1.19.dist-info/METADATA' 2026-04-11T16:38:41,924 adding 'ragbio-0.1.19.dist-info/WHEEL' 2026-04-11T16:38:41,925 adding 'ragbio-0.1.19.dist-info/top_level.txt' 2026-04-11T16:38:41,926 adding 'ragbio-0.1.19.dist-info/RECORD' 2026-04-11T16:38:41,929 removing build/bdist.linux-armv7l/wheel 2026-04-11T16:38:42,034 Building wheel for ragbio (pyproject.toml): finished with status 'done' 2026-04-11T16:38:42,041 Created wheel for ragbio: filename=ragbio-0.1.19-py3-none-any.whl size=164252 sha256=1de84406b97d812a47c817e041e90bc188f5cb09e0f4b796558b0b2d8c7cfe44 2026-04-11T16:38:42,042 Stored in directory: /tmp/pip-ephem-wheel-cache-9n0hxy0p/wheels/1f/28/8b/af348424355128c23f5dd2c0a9057a3f197645c47242aaa72e 2026-04-11T16:38:42,054 Successfully built ragbio 2026-04-11T16:38:42,061 Removed build tracker: '/tmp/pip-build-tracker-7spad6at'