2026-04-14T17:49:52,733 Created temporary directory: /tmp/pip-ephem-wheel-cache-7g6mqf5t 2026-04-14T17:49:52,735 Created temporary directory: /tmp/pip-build-tracker-savxqpzo 2026-04-14T17:49:52,736 Initialized build tracking at /tmp/pip-build-tracker-savxqpzo 2026-04-14T17:49:52,736 Created build tracker: /tmp/pip-build-tracker-savxqpzo 2026-04-14T17:49:52,737 Entered build tracker: /tmp/pip-build-tracker-savxqpzo 2026-04-14T17:49:52,738 Created temporary directory: /tmp/pip-wheel-v80elebm 2026-04-14T17:49:52,740 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-14T17:49:52,743 Created temporary directory: /tmp/pip-ephem-wheel-cache-3ve5g6pp 2026-04-14T17:49:52,765 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-14T17:49:52,768 2 location(s) to search for versions of abutils: 2026-04-14T17:49:52,768 * https://pypi.org/simple/abutils/ 2026-04-14T17:49:52,768 * https://www.piwheels.org/simple/abutils/ 2026-04-14T17:49:52,769 Fetching project page and analyzing links: https://pypi.org/simple/abutils/ 2026-04-14T17:49:52,770 Getting page https://pypi.org/simple/abutils/ 2026-04-14T17:49:52,771 Found index url https://pypi.org/simple 2026-04-14T17:49:52,999 Fetched page https://pypi.org/simple/abutils/ as application/vnd.pypi.simple.v1+json 2026-04-14T17:49:53,015 Found link https://files.pythonhosted.org/packages/50/68/e90af4390a5bf4ae7f4d4c320618c21938407e2cbccb1d8eb9e2128129f7/abutils-0.0.1.tar.gz (from https://pypi.org/simple/abutils/), version: 0.0.1 2026-04-14T17:49:53,016 Found link https://files.pythonhosted.org/packages/2a/34/20450169e044c8a5b3f0789cb6792ac3f0d94ee7314aecda4332460d3996/abutils-0.0.2.tar.gz (from https://pypi.org/simple/abutils/), version: 0.0.2 2026-04-14T17:49:53,016 Found link https://files.pythonhosted.org/packages/e7/0b/92eacaadffa6dbe5536af17cd2288991862e5ca8a5193bc3f5f0c511939b/abutils-0.0.3.tar.gz (from https://pypi.org/simple/abutils/), version: 0.0.3 2026-04-14T17:49:53,017 Found link https://files.pythonhosted.org/packages/66/9c/c88a230d9a7df70ed076345a5697bffbac79affa98de6bc7335cbe399508/abutils-0.0.4.tar.gz (from https://pypi.org/simple/abutils/), version: 0.0.4 2026-04-14T17:49:53,018 Found link https://files.pythonhosted.org/packages/36/3e/e6b030787fca71eedbaaa8be3b8b0169a655c7403622bc0c418918121b72/abutils-0.0.5.tar.gz (from https://pypi.org/simple/abutils/), version: 0.0.5 2026-04-14T17:49:53,019 Found link https://files.pythonhosted.org/packages/c2/4b/a1c076b09bf2ab1f5545d0f9fe05c7861166c49ea9846f2d72f6306e792c/abutils-0.0.6.tar.gz (from https://pypi.org/simple/abutils/), version: 0.0.6 2026-04-14T17:49:53,020 Found link https://files.pythonhosted.org/packages/ba/48/ccd3a0f5de7c0b2857f163b24120b027f9b2d88b5b8898646a6126d2ce6b/abutils-0.0.7.tar.gz (from https://pypi.org/simple/abutils/), version: 0.0.7 2026-04-14T17:49:53,020 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/8e/ba/0b774748bc954d98e3246982d1017d09459ecbc21a76628161aa49d4e3fc/abutils-0.1.0-py3-none-any.whl (from https://pypi.org/simple/abutils/) 2026-04-14T17:49:53,021 Found link https://files.pythonhosted.org/packages/8d/4f/f8bde54f3acd7bf945ac9d612145ca8fc2a0eecf26aa439921941211a91a/abutils-0.1.0.tar.gz (from https://pypi.org/simple/abutils/), version: 0.1.0 2026-04-14T17:49:53,022 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/99/db/544d2861d9f00f1454ae247e50d074062929bdeb0c2d0e968f51e132320e/abutils-0.1.1-py3-none-any.whl (from https://pypi.org/simple/abutils/) 2026-04-14T17:49:53,022 Found link https://files.pythonhosted.org/packages/2e/53/f9f6ef913b46b47233508bafc5c4869a46f3c66a0ec9e446bef0537c88f6/abutils-0.1.1.tar.gz (from https://pypi.org/simple/abutils/), version: 0.1.1 2026-04-14T17:49:53,023 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/72/6e/6af90e6c896511e60fa77eeb6742933760f8cc5ba8a8ffbea1bf00440dcf/abutils-0.2-py3-none-any.whl (from https://pypi.org/simple/abutils/) 2026-04-14T17:49:53,024 Found link https://files.pythonhosted.org/packages/58/06/198c2161367eed257bbbc6295af2f6bd9148bccd26f67535bd07d1974dfb/abutils-0.2.tar.gz (from https://pypi.org/simple/abutils/), version: 0.2 2026-04-14T17:49:53,025 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/e9/6b/41bd824641aee954bdc00d6fcc3d7f411af32a68acdbb7330c59d7fab67f/abutils-0.2.1-py3-none-any.whl (from https://pypi.org/simple/abutils/) 2026-04-14T17:49:53,025 Found link https://files.pythonhosted.org/packages/c3/51/083596ecb529073ccc5142ffe85766aef208bd4d6925da8f771f6f95e256/abutils-0.2.1.tar.gz (from https://pypi.org/simple/abutils/), version: 0.2.1 2026-04-14T17:49:53,026 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/94/cf/ae1ab5392b0f34c874cc8388d4df2985a2fc02d63dedcad0c2f4ca4b92bd/abutils-0.2.2-py3-none-any.whl (from https://pypi.org/simple/abutils/) 2026-04-14T17:49:53,026 Found link https://files.pythonhosted.org/packages/dc/f5/c8838ebb6fbaa6b3d01d01d2d56e2ad5352fbeebf5086542c5bcef34c06a/abutils-0.2.2.tar.gz (from https://pypi.org/simple/abutils/), version: 0.2.2 2026-04-14T17:49:53,027 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/6a/94/90937a56b32783d6d57a2d6ff5e47d10d1d384f3d084e304f7870297853d/abutils-0.2.3-py3-none-any.whl (from https://pypi.org/simple/abutils/) 2026-04-14T17:49:53,028 Found link https://files.pythonhosted.org/packages/1e/a6/95c66c7ea2857825eb0af0fcd4e53687b65e4842b010caea5276bd97cd22/abutils-0.2.3.tar.gz (from https://pypi.org/simple/abutils/), version: 0.2.3 2026-04-14T17:49:53,028 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/1b/b2/13e6e64fe25b4ef34bcd9fbd9785b8446dbca4cf4a7fbbafddbfba957aad/abutils-0.2.4-py3-none-any.whl (from https://pypi.org/simple/abutils/) 2026-04-14T17:49:53,029 Found link https://files.pythonhosted.org/packages/cc/04/a14461968dc575254af0e23cb7b259bfd57baa683653d88fcb21af6d526d/abutils-0.2.4.tar.gz (from https://pypi.org/simple/abutils/), version: 0.2.4 2026-04-14T17:49:53,029 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/f8/0d/f3f7b8eb834c24ffe8bf065ce6ab6bf5a60953ea369b1714a5130c0f17fe/abutils-0.2.5-py3-none-any.whl (from https://pypi.org/simple/abutils/) 2026-04-14T17:49:53,030 Found link https://files.pythonhosted.org/packages/3a/91/b7e6649e58b286eb6bfcc14fbe33cc120e3ff30fbacf681b4dca97a448bd/abutils-0.2.5.tar.gz (from https://pypi.org/simple/abutils/), version: 0.2.5 2026-04-14T17:49:53,031 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/12/e1/e1ceba3721fa4fff7f176206a290b81ec655694bd89734038c4d699fbb7e/abutils-0.2.6-py3-none-any.whl (from https://pypi.org/simple/abutils/) 2026-04-14T17:49:53,031 Found link https://files.pythonhosted.org/packages/45/72/e74e2706a57c4198e8bbd4808aede6033ab4d34fd3ee424340d0b9499677/abutils-0.2.6.tar.gz (from https://pypi.org/simple/abutils/), version: 0.2.6 2026-04-14T17:49:53,032 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/c0/a4/19862643abc6afa356a2820636a33717d5be8c10526d201168493a638fae/abutils-0.2.7-py3-none-any.whl (from https://pypi.org/simple/abutils/) 2026-04-14T17:49:53,033 Found link https://files.pythonhosted.org/packages/00/01/891b1ca937c5e750cde18296579e86c2b58a95fed1bf39a5333d626a1d94/abutils-0.2.7.tar.gz (from https://pypi.org/simple/abutils/), version: 0.2.7 2026-04-14T17:49:53,033 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/4b/65/46f8207ebbebc30eec8dde3eba9f5d2d2a16cf8450d4a083a27468c59d65/abutils-0.2.8-py3-none-any.whl (from https://pypi.org/simple/abutils/) 2026-04-14T17:49:53,034 Found link https://files.pythonhosted.org/packages/80/d4/73e1812e044e0443711b85e1037177b9cd39af0f21ece96e0745e9ddc266/abutils-0.2.8.tar.gz (from https://pypi.org/simple/abutils/), version: 0.2.8 2026-04-14T17:49:53,035 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/b9/39/de6c569ad2cdc7e6a441e15f25f48fedac246ffc194729518308051e12ec/abutils-0.2.9-py3-none-any.whl (from https://pypi.org/simple/abutils/) 2026-04-14T17:49:53,036 Found link https://files.pythonhosted.org/packages/a2/a2/0c519de24d956d49801fe97153a28d623bd2fd411991d787b899b25c13a7/abutils-0.2.9.tar.gz (from https://pypi.org/simple/abutils/), version: 0.2.9 2026-04-14T17:49:53,036 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/4d/fd/ba6899283eaf68474bc2e600c2a5708137473eae7bf7ba3c076cd6303767/abutils-0.2.10-py3-none-any.whl (from https://pypi.org/simple/abutils/) 2026-04-14T17:49:53,037 Found link https://files.pythonhosted.org/packages/16/2f/6264367df474ff3a9a5c5ef42771661bac1085d7133867270edb7c118684/abutils-0.2.10.tar.gz (from https://pypi.org/simple/abutils/), version: 0.2.10 2026-04-14T17:49:53,037 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/92/86/5f63b53160c54dacfd8f2653c0a6039fb4366a117c060e5f289766ac7fa8/abutils-0.3.0-py3-none-any.whl (from https://pypi.org/simple/abutils/) 2026-04-14T17:49:53,038 Found link https://files.pythonhosted.org/packages/13/fc/afc4bbc66213912ee11b40a8ea571270b317c4367b5f28c523f6c3d4858f/abutils-0.3.0.tar.gz (from https://pypi.org/simple/abutils/), version: 0.3.0 2026-04-14T17:49:53,039 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/69/1c/cfed98cabbae17e2c3c3c49395ddc92554335ffef1eec47a78682a5e6870/abutils-0.3.1-py3-none-any.whl (from https://pypi.org/simple/abutils/) 2026-04-14T17:49:53,039 Found link https://files.pythonhosted.org/packages/0b/fb/21d3594c4fe0ce1e7b035808b68c73e6a14eef95fb27fb27e45cb50ecf18/abutils-0.3.1.tar.gz (from https://pypi.org/simple/abutils/), version: 0.3.1 2026-04-14T17:49:53,040 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/99/86/2e6b0ac4db36ffec78925d7fc6da7dfb15017038325f8daa7feac0729f03/abutils-0.4.1-py3-none-any.whl (from https://pypi.org/simple/abutils/) (requires-python:>=3.8) 2026-04-14T17:49:53,041 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/f6/d6/90c610e33db7ea064aaf85e875712994d51c6594fa034ea6dba0f994a332/abutils-0.4.2-py3-none-any.whl (from https://pypi.org/simple/abutils/) (requires-python:>=3.8) 2026-04-14T17:49:53,042 Found link https://files.pythonhosted.org/packages/05/4f/d2a62ba3753455ecb46772cb2c6c99148904a1fb1066e5ffb3a45d62ce53/abutils-0.4.2.tar.gz (from https://pypi.org/simple/abutils/) (requires-python:>=3.8), version: 0.4.2 2026-04-14T17:49:53,043 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/e1/fe/c5bb8d54b0c116ec2580b04b3a21f19c017b2437602701cda5a59012cad0/abutils-0.4.3-py3-none-any.whl (from https://pypi.org/simple/abutils/) (requires-python:>=3.8) 2026-04-14T17:49:53,044 Found link https://files.pythonhosted.org/packages/27/8c/e1177b8f90d4c56b25d779562900871e838398f003f10493c41383959492/abutils-0.4.3.tar.gz (from https://pypi.org/simple/abutils/) (requires-python:>=3.8), version: 0.4.3 2026-04-14T17:49:53,045 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/91/30/af7cea776cae6162286b03857e130350556991bf5e25435931b4e6e7fa59/abutils-0.4.4-py3-none-any.whl (from https://pypi.org/simple/abutils/) (requires-python:>=3.8) 2026-04-14T17:49:53,046 Found link https://files.pythonhosted.org/packages/38/35/b3ec5ecbd44bfb5d81d6d76f4eae2a5c6f8d19b31e4a2e98526ccfe98a83/abutils-0.4.4.tar.gz (from https://pypi.org/simple/abutils/) (requires-python:>=3.8), version: 0.4.4 2026-04-14T17:49:53,047 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/97/c7/38f78f7d9f6ec2b43ee909c0d72e3da5b1f357eb2137f9b72309e761843b/abutils-0.4.5-py3-none-any.whl (from https://pypi.org/simple/abutils/) (requires-python:>=3.8) 2026-04-14T17:49:53,048 Found link https://files.pythonhosted.org/packages/14/ba/621da2e617c467936d12b7568b959ad5b15b2859ac421b5d7fdfdb9de6b8/abutils-0.4.5.tar.gz (from https://pypi.org/simple/abutils/) (requires-python:>=3.8), version: 0.4.5 2026-04-14T17:49:53,049 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/05/eb/9553cce771bb8b7f780f78b887be3f04e186a953bf460e96030da1731c33/abutils-0.4.9-py3-none-any.whl (from https://pypi.org/simple/abutils/) (requires-python:>=3.8) 2026-04-14T17:49:53,050 Found link https://files.pythonhosted.org/packages/3d/3d/1d6bcd5d2f39921243c260d65d9d69a2135366ca609c066193628e978615/abutils-0.4.9.tar.gz (from https://pypi.org/simple/abutils/) (requires-python:>=3.8), version: 0.4.9 2026-04-14T17:49:53,051 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/3b/43/a761fac80ad5f4b4029940af8605954745361743d4367d87fbdd3409d586/abutils-0.4.10-py3-none-any.whl (from https://pypi.org/simple/abutils/) (requires-python:>=3.8) 2026-04-14T17:49:53,051 Found link https://files.pythonhosted.org/packages/74/d5/431539f8bd6ee44d1c963a82a13a53280f4fc4aea996361f10dc625bffe5/abutils-0.4.10.tar.gz (from https://pypi.org/simple/abutils/) (requires-python:>=3.8), version: 0.4.10 2026-04-14T17:49:53,052 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/d8/88/57ba0fba975a4ebba5fc08c7653fba9062762f4a93428ef15142a2519e80/abutils-0.4.11-py3-none-any.whl (from https://pypi.org/simple/abutils/) (requires-python:>=3.8) 2026-04-14T17:49:53,053 Found link https://files.pythonhosted.org/packages/ba/0e/663ca692cb581947eb48e026cd1c487a8fb04f0c8ec070179ba2d7fa8965/abutils-0.4.11.tar.gz (from https://pypi.org/simple/abutils/) (requires-python:>=3.8), version: 0.4.11 2026-04-14T17:49:53,054 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/58/d6/7fe0dbc7af905014453abfc46234b97eb3839c674564570acaaa849ef66d/abutils-0.4.12-py3-none-any.whl (from https://pypi.org/simple/abutils/) (requires-python:>=3.8) 2026-04-14T17:49:53,055 Found link https://files.pythonhosted.org/packages/bc/9e/f8b9536d718d825a05d17da487afcc464bf73aaf90f218bc7c61d980db17/abutils-0.4.12.tar.gz (from https://pypi.org/simple/abutils/) (requires-python:>=3.8), version: 0.4.12 2026-04-14T17:49:53,055 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/58/d0/204c4d0399a3bf147a462fbcc7348256abf67ca554a15f3b2693ee166e20/abutils-0.4.13-py3-none-any.whl (from https://pypi.org/simple/abutils/) (requires-python:>=3.8) 2026-04-14T17:49:53,056 Found link https://files.pythonhosted.org/packages/db/b0/70644d9b16f63d1d8b7ff1cc62197c2f294f6b290fdaa18e63a1ff351abb/abutils-0.4.13.tar.gz (from https://pypi.org/simple/abutils/) (requires-python:>=3.8), version: 0.4.13 2026-04-14T17:49:53,057 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/27/67/e9482fbb7c68ca766c27d16eeec49435a39441b7c537141a9d934eb572a7/abutils-0.4.14-py3-none-any.whl (from https://pypi.org/simple/abutils/) (requires-python:>=3.8) 2026-04-14T17:49:53,058 Found link https://files.pythonhosted.org/packages/be/a6/37faa00529f6e4ee9755159f09b0d0944a13a9c61c77473f6b48d0899353/abutils-0.4.14.tar.gz (from https://pypi.org/simple/abutils/) (requires-python:>=3.8), version: 0.4.14 2026-04-14T17:49:53,058 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/d0/ca/9b0f9dd1cac5d0aab37aae686163c755ab047c39977b78a433210004809b/abutils-0.4.15-py3-none-any.whl (from https://pypi.org/simple/abutils/) (requires-python:>=3.8) 2026-04-14T17:49:53,059 Found link https://files.pythonhosted.org/packages/06/4f/e408816f82dc664ecb207d665b10ac107e72511ff35fe3aa2faef61beaa6/abutils-0.4.15.tar.gz (from https://pypi.org/simple/abutils/) (requires-python:>=3.8), version: 0.4.15 2026-04-14T17:49:53,060 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/d5/c8/ed9f589b0dad8d7b21defab7e746063a521f5c58512914e6f69c61f8653c/abutils-0.4.16-py3-none-any.whl (from https://pypi.org/simple/abutils/) (requires-python:>=3.8) 2026-04-14T17:49:53,061 Found link https://files.pythonhosted.org/packages/17/60/7cbf5a780e902a382bdf2d2d7234e31865d1396d4810b32baa82c655bc6c/abutils-0.4.16.tar.gz (from https://pypi.org/simple/abutils/) (requires-python:>=3.8), version: 0.4.16 2026-04-14T17:49:53,061 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/af/7d/1cd869e982424d2ab272bcd2494097cf835d5b5008f99c3fc20bb424859f/abutils-0.4.17-py3-none-any.whl (from https://pypi.org/simple/abutils/) (requires-python:>=3.8) 2026-04-14T17:49:53,062 Found link https://files.pythonhosted.org/packages/82/cd/9a3860c7b4ac151b66d86f96e8e5f08ff595b691ec42ffda3a2ded4accff/abutils-0.4.17.tar.gz (from https://pypi.org/simple/abutils/) (requires-python:>=3.8), version: 0.4.17 2026-04-14T17:49:53,063 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/71/99/e6ff52fa04ff1caaefacc71cb15c8b0e6ae73b630f3d9c5046fa72c46ab0/abutils-0.4.18-py3-none-any.whl (from https://pypi.org/simple/abutils/) (requires-python:>=3.8) 2026-04-14T17:49:53,064 Found link https://files.pythonhosted.org/packages/99/58/2a2a8151f98a8787a9f8d44b4e73ffdf9681c48fad3a365169b23314ab75/abutils-0.4.18.tar.gz (from https://pypi.org/simple/abutils/) (requires-python:>=3.8), version: 0.4.18 2026-04-14T17:49:53,064 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/c5/81/8a9d99a2f18ae4e3486a3144bc86ba974b7572e0af7e393d94247c6c07c2/abutils-0.5.0-py3-none-any.whl (from https://pypi.org/simple/abutils/) (requires-python:>=3.8) 2026-04-14T17:49:53,065 Found link https://files.pythonhosted.org/packages/03/a6/9f22bbc825b9f9d4b1ab512b5dd6f839e0d34713e3d9314101dc256a6153/abutils-0.5.0.tar.gz (from https://pypi.org/simple/abutils/) (requires-python:>=3.8), version: 0.5.0 2026-04-14T17:49:53,066 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/e2/16/e0fa4186d41cde63deecd3ab29d87a252115767d6ed8bdddfefa8c38fdc7/abutils-0.5.1-py3-none-any.whl (from https://pypi.org/simple/abutils/) (requires-python:>=3.10) 2026-04-14T17:49:53,067 Found link https://files.pythonhosted.org/packages/3e/6d/7f9b56899d88600fa359a8712552225ff147656253db26861756f9c8af07/abutils-0.5.1.tar.gz (from https://pypi.org/simple/abutils/) (requires-python:>=3.10), version: 0.5.1 2026-04-14T17:49:53,067 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/6e/46/4aea83f2a06467b49dd6bc4bf8210a2fc2a839287fbcbbc87f3ee0c0a092/abutils-0.5.2-py3-none-any.whl (from https://pypi.org/simple/abutils/) (requires-python:>=3.10) 2026-04-14T17:49:53,068 Found link https://files.pythonhosted.org/packages/aa/99/c8973219cdbbe16e49bf7185a83cff4e0434f997c982ee792f68702ee818/abutils-0.5.2.tar.gz (from https://pypi.org/simple/abutils/) (requires-python:>=3.10), version: 0.5.2 2026-04-14T17:49:53,069 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/d0/e0/27e6fa2a3b56e280e1c115f424730853337f846c64d9b13d9d241a92c678/abutils-0.5.3-py3-none-any.whl (from https://pypi.org/simple/abutils/) (requires-python:>=3.10) 2026-04-14T17:49:53,070 Found link https://files.pythonhosted.org/packages/91/87/9a30443a62cc5d6fe527640fdcb181e6d3dbb8151c3dadca1292ee0c9e8b/abutils-0.5.3.tar.gz (from https://pypi.org/simple/abutils/) (requires-python:>=3.10), version: 0.5.3 2026-04-14T17:49:53,070 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/74/6d/c0fe1f7c22f6dc081b2036f72c31e02eecd78c1307b24a0bc3f2b631c553/abutils-0.5.4-py3-none-any.whl (from https://pypi.org/simple/abutils/) (requires-python:>=3.10) 2026-04-14T17:49:53,071 Found link https://files.pythonhosted.org/packages/ba/c0/05894aeff89c7a3ede9cf69d5ef42e2ecd18181a72557f0f3ef6253c179d/abutils-0.5.4.tar.gz (from https://pypi.org/simple/abutils/) (requires-python:>=3.10), version: 0.5.4 2026-04-14T17:49:53,072 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/37/ca/b39b2b08068fdee98e3f65749790dd367c08536ada07acb9ba2d5d386709/abutils-0.6.0-py3-none-any.whl (from https://pypi.org/simple/abutils/) (requires-python:>=3.10) 2026-04-14T17:49:53,073 Found link https://files.pythonhosted.org/packages/b8/06/55e102f4b807492ca86e63a79ccfc431d727dbad73f93f4f1f5962702d1f/abutils-0.6.0.tar.gz (from https://pypi.org/simple/abutils/) (requires-python:>=3.10), version: 0.6.0 2026-04-14T17:49:53,074 Fetching project page and analyzing links: https://www.piwheels.org/simple/abutils/ 2026-04-14T17:49:53,075 Getting page https://www.piwheels.org/simple/abutils/ 2026-04-14T17:49:53,076 Found index url https://www.piwheels.org/simple 2026-04-14T17:49:53,251 Fetched page https://www.piwheels.org/simple/abutils/ as text/html 2026-04-14T17:49:53,262 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.5.4-py3-none-any.whl#sha256=43e4d2c62708d16ff13a70ad6cb0bc5b00dea785c65fe87849792abdeca5ad58 (from https://www.piwheels.org/simple/abutils/) (requires-python:>=3.10) 2026-04-14T17:49:53,263 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.5.3-py3-none-any.whl#sha256=7f4fb99c951828dba8b9e39fbf007939f3f76e461282709c4eb396219c20e27a (from https://www.piwheels.org/simple/abutils/) (requires-python:>=3.10) 2026-04-14T17:49:53,264 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.5.2-py3-none-any.whl#sha256=622fe469abaae88b9b4ecf4ca27f989333e51ad1382b99256b0c5ded40e968a5 (from https://www.piwheels.org/simple/abutils/) (requires-python:>=3.10) 2026-04-14T17:49:53,264 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.5.1-py3-none-any.whl#sha256=f9c9d2f1f0ee769ed71d0a7d37b21b6314790ae5dc9657bd6887b8bbd711d901 (from https://www.piwheels.org/simple/abutils/) (requires-python:>=3.10) 2026-04-14T17:49:53,265 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.5.0-py3-none-any.whl#sha256=854d787c69b4172b0fcc77818217863aa03dbf314d7289f4d28d3e409e7417fc (from https://www.piwheels.org/simple/abutils/) (requires-python:>=3.8) 2026-04-14T17:49:53,265 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.4.18-py3-none-any.whl#sha256=a25a7ea0bf857f4d5737c1a31ab531ee028c54ba0e28586b154eec61b0f4a00d (from https://www.piwheels.org/simple/abutils/) (requires-python:>=3.8) 2026-04-14T17:49:53,266 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.4.17-py3-none-any.whl#sha256=e6efc7f40f7e325539b6827a0571bcb4802f1e107cbca074855d2370765ff1bc (from https://www.piwheels.org/simple/abutils/) (requires-python:>=3.8) 2026-04-14T17:49:53,266 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.4.16-py3-none-any.whl#sha256=bfe77326744bbec2b055c61dda545ab517a46e913ce9fb846d5a675ba4370e4c (from https://www.piwheels.org/simple/abutils/) (requires-python:>=3.8) 2026-04-14T17:49:53,267 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.4.15-py3-none-any.whl#sha256=c5ebdecdf4701ebf0727be6284c1dae7f15807f49b60f5b74143b0fce191886a (from https://www.piwheels.org/simple/abutils/) (requires-python:>=3.8) 2026-04-14T17:49:53,268 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.4.14-py3-none-any.whl#sha256=77e18b7cd259b053cb0519c5069e2802c6e5e89dcfb5ee231dcce991bfe27d40 (from https://www.piwheels.org/simple/abutils/) (requires-python:>=3.8) 2026-04-14T17:49:53,268 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.4.13-py3-none-any.whl#sha256=469dd215e640d26da98b8a0fb398ac40a41cf6b04b71ded2321d8459cc9d206a (from https://www.piwheels.org/simple/abutils/) (requires-python:>=3.8) 2026-04-14T17:49:53,269 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.4.12-py3-none-any.whl#sha256=e157c1f73ef3622e0dd640a5ad61e5c96183b9d845bdbdfb55e482fc2ec267be (from https://www.piwheels.org/simple/abutils/) (requires-python:>=3.8) 2026-04-14T17:49:53,270 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.4.11-py3-none-any.whl#sha256=0a33949fab7c91399dd87ebc9c39e6125537b4c12f23b2671b612511dcaa3070 (from https://www.piwheels.org/simple/abutils/) (requires-python:>=3.8) 2026-04-14T17:49:53,270 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.4.10-py3-none-any.whl#sha256=5a6ea551b1f98cfdcabd16be056be46843163b5f5fce2e3b2de758239505a1d2 (from https://www.piwheels.org/simple/abutils/) (requires-python:>=3.8) 2026-04-14T17:49:53,271 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.4.9-py3-none-any.whl#sha256=9558893155ed3ef1feed683a43390aa5ce78a00746f32452945dc90cfe733b73 (from https://www.piwheels.org/simple/abutils/) (requires-python:>=3.8) 2026-04-14T17:49:53,271 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.4.5-py3-none-any.whl#sha256=ff4790a1aac8a099c603fbc67c4d341a154c5f999d75d9b9da4a0e1ebc8ba0b4 (from https://www.piwheels.org/simple/abutils/) (requires-python:>=3.8) 2026-04-14T17:49:53,272 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.4.4-py3-none-any.whl#sha256=c6431239a8778cec21099f85b769106599aeb18efcb2b95b7da0a6803add1fc3 (from https://www.piwheels.org/simple/abutils/) (requires-python:>=3.8) 2026-04-14T17:49:53,272 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.4.3-py3-none-any.whl#sha256=5057eda1cd8d00800ffc6c3f7d9134301b04e1a27f67f2d2126809d2463da701 (from https://www.piwheels.org/simple/abutils/) (requires-python:>=3.8) 2026-04-14T17:49:53,273 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.4.2-py3-none-any.whl#sha256=e3a66b81fd28bee5d6aad0c69329e384cb67263a57a72a62a56b7aa63f4d295e (from https://www.piwheels.org/simple/abutils/) (requires-python:>=3.8) 2026-04-14T17:49:53,273 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.3.1-py3-none-any.whl#sha256=1fbfc14143d5e4d142be747c1c55e24411e9943441689f13193e8cc5a7e9ce11 (from https://www.piwheels.org/simple/abutils/) 2026-04-14T17:49:53,274 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.3.0-py3-none-any.whl#sha256=4260a96c149498cd519f4d6dbcbb5075a0b7cd820b16bec4cd6eafe452f6e7a6 (from https://www.piwheels.org/simple/abutils/) 2026-04-14T17:49:53,274 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.2.10-py3-none-any.whl#sha256=e3c2000d5fbda1d63690e6f816caf1426457be23f1c6a8fa1ad98e7c60affdc2 (from https://www.piwheels.org/simple/abutils/) 2026-04-14T17:49:53,275 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.2.9-py3-none-any.whl#sha256=84839a0dab320a6696a87f066a0305c0d4291cabe5e823926b72a5ad8dd04251 (from https://www.piwheels.org/simple/abutils/) 2026-04-14T17:49:53,275 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.2.8-py3-none-any.whl#sha256=efacee89c956fcb8908db8f223563d8c9d9667fc837ca56a849aba84bcb5bcb8 (from https://www.piwheels.org/simple/abutils/) 2026-04-14T17:49:53,276 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.2.7-py3-none-any.whl#sha256=d72c4998d17baff3346c3732d416710e4959d6d69954264b5c18ea7136967243 (from https://www.piwheels.org/simple/abutils/) 2026-04-14T17:49:53,276 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.2.6-py3-none-any.whl#sha256=38b1c0070e0f5764ee6ffad6eadde071a320f0eb3372912678767047c9136880 (from https://www.piwheels.org/simple/abutils/) 2026-04-14T17:49:53,277 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.2.5-py3-none-any.whl#sha256=132b4af2881b535924c6b615f7e0dca8d858a65db5ce7f600425f0afa220e942 (from https://www.piwheels.org/simple/abutils/) 2026-04-14T17:49:53,278 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.2.4-py3-none-any.whl#sha256=b7cc50211227f95b0544149ddb49e17cf733ece77b8531c94bcdebabef433b03 (from https://www.piwheels.org/simple/abutils/) 2026-04-14T17:49:53,278 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.2.3-py3-none-any.whl#sha256=6b5c561a177253264806f3f200ae9aaec814f0c8c0d4205621e783ed7a7e666d (from https://www.piwheels.org/simple/abutils/) 2026-04-14T17:49:53,279 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.2.2-py3-none-any.whl#sha256=c5fdeed840fe64d0f8ef6b8b41d34c9d30aaf82fe1313e5d2001037d4f2cdf4c (from https://www.piwheels.org/simple/abutils/) 2026-04-14T17:49:53,279 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.2.1-py3-none-any.whl#sha256=53ea13e6f02b9605de8c9613420aaed78962fb944ecdfc100603204c264c7d40 (from https://www.piwheels.org/simple/abutils/) 2026-04-14T17:49:53,279 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.2-py3-none-any.whl#sha256=ff38b64e1d607db600d5dd88d0a867273e041adde7d995e24c632ca7ee4c07bd (from https://www.piwheels.org/simple/abutils/) 2026-04-14T17:49:53,280 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.1.1-py3-none-any.whl#sha256=e848425dd30ebba12d526963aed48ce2705734d49626dcc0c01e60813ce6cf98 (from https://www.piwheels.org/simple/abutils/) 2026-04-14T17:49:53,281 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.1.0-py3-none-any.whl#sha256=4546e6994f84194f448c4af73e9ac961b6cee59d5825bce6b688a7eb31f173f8 (from https://www.piwheels.org/simple/abutils/) 2026-04-14T17:49:53,281 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.0.7-py3-none-any.whl#sha256=54b0191660cee12eae66a1c9a280779122ee367b18dc31f5386ed7d9695ba86d (from https://www.piwheels.org/simple/abutils/) 2026-04-14T17:49:53,282 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.0.6-py3-none-any.whl#sha256=fa097decefc770e42b78c47c6b74e544cb886b2913fdd2a9764d1649c1083edc (from https://www.piwheels.org/simple/abutils/) 2026-04-14T17:49:53,282 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.0.5-py3-none-any.whl#sha256=82da39e304387e62441d40c8da3e8b8e4f88b62838f0cfa01c9ac53272fd9322 (from https://www.piwheels.org/simple/abutils/) 2026-04-14T17:49:53,283 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.0.4-py3-none-any.whl#sha256=a857179e2e3aacd72f0100ab26ddd429e314d0484d9dea700b6e3df6e7b08bfc (from https://www.piwheels.org/simple/abutils/) 2026-04-14T17:49:53,283 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.0.3-py3-none-any.whl#sha256=3f9161ddaf87fcf6397f20c643a10e6c64dcc028dd9d608e3ba95e9eb4b42301 (from https://www.piwheels.org/simple/abutils/) 2026-04-14T17:49:53,284 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.0.2-py3-none-any.whl#sha256=fb1485c1bdfebb4961c6b63db9ae9c45af6af544bf5a1d88830bff9601c333f7 (from https://www.piwheels.org/simple/abutils/) 2026-04-14T17:49:53,284 Skipping link: No binaries permitted for abutils: https://archive1.piwheels.org/simple/abutils/abutils-0.0.1-py3-none-any.whl#sha256=80befe258b5d18e6293ffa5f53b4c6fca19cd9c57418df3ad521a374f3827c35 (from https://www.piwheels.org/simple/abutils/) 2026-04-14T17:49:53,285 Skipping link: not a file: https://www.piwheels.org/simple/abutils/ 2026-04-14T17:49:53,286 Skipping link: not a file: https://pypi.org/simple/abutils/ 2026-04-14T17:49:53,311 Given no hashes to check 1 links for project 'abutils': discarding no candidates 2026-04-14T17:49:53,330 Collecting abutils==0.6.0 2026-04-14T17:49:53,333 Created temporary directory: /tmp/pip-unpack-2qhg6llr 2026-04-14T17:49:53,480 Downloading abutils-0.6.0.tar.gz (86.1 MB) 2026-04-14T17:50:08,398 Added abutils==0.6.0 from https://files.pythonhosted.org/packages/b8/06/55e102f4b807492ca86e63a79ccfc431d727dbad73f93f4f1f5962702d1f/abutils-0.6.0.tar.gz to build tracker '/tmp/pip-build-tracker-savxqpzo' 2026-04-14T17:50:08,400 Running setup.py (path:/tmp/pip-wheel-v80elebm/abutils_438aeb262b224717925214f3ac673df9/setup.py) egg_info for package abutils 2026-04-14T17:50:08,400 Created temporary directory: /tmp/pip-pip-egg-info-6upg47id 2026-04-14T17:50:08,401 Preparing metadata (setup.py): started 2026-04-14T17:50:08,402 Running command python setup.py egg_info 2026-04-14T17:50:08,949 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:599: SetuptoolsDeprecationWarning: Invalid dash-separated key 'description-file' in 'metadata' (setup.cfg), please use the underscore name 'description_file' instead. 2026-04-14T17:50:08,949 !! 2026-04-14T17:50:08,950 ******************************************************************************** 2026-04-14T17:50:08,951 Usage of dash-separated 'description-file' will not be supported in future 2026-04-14T17:50:08,951 versions. Please use the underscore name 'description_file' instead. 2026-04-14T17:50:08,953 Available configuration options are listed in: 2026-04-14T17:50:08,954 https://setuptools.pypa.io/en/latest/userguide/declarative_config.html 2026-04-14T17:50:08,955 This deprecation is overdue, please update your project and remove deprecated 2026-04-14T17:50:08,955 calls to avoid build errors in the future. 2026-04-14T17:50:08,957 See https://github.com/pypa/setuptools/discussions/5011 for details. 2026-04-14T17:50:08,957 ******************************************************************************** 2026-04-14T17:50:08,959 !! 2026-04-14T17:50:08,959 opt = self._enforce_underscore(opt, section) 2026-04-14T17:50:09,281 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:599: SetuptoolsDeprecationWarning: Invalid dash-separated key 'description-file' in 'metadata' (setup.cfg), please use the underscore name 'description_file' instead. 2026-04-14T17:50:09,281 !! 2026-04-14T17:50:09,283 ******************************************************************************** 2026-04-14T17:50:09,283 Usage of dash-separated 'description-file' will not be supported in future 2026-04-14T17:50:09,284 versions. Please use the underscore name 'description_file' instead. 2026-04-14T17:50:09,284 (Affected: abutils). 2026-04-14T17:50:09,286 Available configuration options are listed in: 2026-04-14T17:50:09,286 https://setuptools.pypa.io/en/latest/userguide/declarative_config.html 2026-04-14T17:50:09,287 This deprecation is overdue, please update your project and remove deprecated 2026-04-14T17:50:09,288 calls to avoid build errors in the future. 2026-04-14T17:50:09,289 See https://github.com/pypa/setuptools/discussions/5011 for details. 2026-04-14T17:50:09,290 ******************************************************************************** 2026-04-14T17:50:09,291 !! 2026-04-14T17:50:09,292 opt = self._enforce_underscore(opt, section) 2026-04-14T17:50:09,292 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-14T17:50:09,293 !! 2026-04-14T17:50:09,294 ******************************************************************************** 2026-04-14T17:50:09,294 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-14T17:50:09,295 License :: OSI Approved :: MIT License 2026-04-14T17:50:09,296 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-14T17:50:09,296 ******************************************************************************** 2026-04-14T17:50:09,297 !! 2026-04-14T17:50:09,298 self._finalize_license_expression() 2026-04-14T17:50:09,313 running egg_info 2026-04-14T17:50:09,340 creating /tmp/pip-pip-egg-info-6upg47id/abutils.egg-info 2026-04-14T17:50:09,341 writing /tmp/pip-pip-egg-info-6upg47id/abutils.egg-info/PKG-INFO 2026-04-14T17:50:09,344 writing dependency_links to /tmp/pip-pip-egg-info-6upg47id/abutils.egg-info/dependency_links.txt 2026-04-14T17:50:09,346 writing requirements to /tmp/pip-pip-egg-info-6upg47id/abutils.egg-info/requires.txt 2026-04-14T17:50:09,347 writing top-level names to /tmp/pip-pip-egg-info-6upg47id/abutils.egg-info/top_level.txt 2026-04-14T17:50:09,349 writing manifest file '/tmp/pip-pip-egg-info-6upg47id/abutils.egg-info/SOURCES.txt' 2026-04-14T17:50:09,447 reading manifest file '/tmp/pip-pip-egg-info-6upg47id/abutils.egg-info/SOURCES.txt' 2026-04-14T17:50:09,449 reading manifest template 'MANIFEST.in' 2026-04-14T17:50:09,466 adding license file 'LICENSE' 2026-04-14T17:50:09,475 writing manifest file '/tmp/pip-pip-egg-info-6upg47id/abutils.egg-info/SOURCES.txt' 2026-04-14T17:50:09,582 Preparing metadata (setup.py): finished with status 'done' 2026-04-14T17:50:09,587 Source in /tmp/pip-wheel-v80elebm/abutils_438aeb262b224717925214f3ac673df9 has version 0.6.0, which satisfies requirement abutils==0.6.0 from https://files.pythonhosted.org/packages/b8/06/55e102f4b807492ca86e63a79ccfc431d727dbad73f93f4f1f5962702d1f/abutils-0.6.0.tar.gz 2026-04-14T17:50:09,588 Removed abutils==0.6.0 from https://files.pythonhosted.org/packages/b8/06/55e102f4b807492ca86e63a79ccfc431d727dbad73f93f4f1f5962702d1f/abutils-0.6.0.tar.gz from build tracker '/tmp/pip-build-tracker-savxqpzo' 2026-04-14T17:50:09,594 Created temporary directory: /tmp/pip-unpack-umgnbvdy 2026-04-14T17:50:09,595 Building wheels for collected packages: abutils 2026-04-14T17:50:09,600 Created temporary directory: /tmp/pip-wheel-mp2blbdc 2026-04-14T17:50:09,600 Building wheel for abutils (setup.py): started 2026-04-14T17:50:09,602 Destination directory: /tmp/pip-wheel-mp2blbdc 2026-04-14T17:50:09,602 Running command python setup.py bdist_wheel 2026-04-14T17:50:10,121 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:599: SetuptoolsDeprecationWarning: Invalid dash-separated key 'description-file' in 'metadata' (setup.cfg), please use the underscore name 'description_file' instead. 2026-04-14T17:50:10,121 !! 2026-04-14T17:50:10,122 ******************************************************************************** 2026-04-14T17:50:10,123 Usage of dash-separated 'description-file' will not be supported in future 2026-04-14T17:50:10,124 versions. Please use the underscore name 'description_file' instead. 2026-04-14T17:50:10,125 Available configuration options are listed in: 2026-04-14T17:50:10,126 https://setuptools.pypa.io/en/latest/userguide/declarative_config.html 2026-04-14T17:50:10,127 This deprecation is overdue, please update your project and remove deprecated 2026-04-14T17:50:10,128 calls to avoid build errors in the future. 2026-04-14T17:50:10,129 See https://github.com/pypa/setuptools/discussions/5011 for details. 2026-04-14T17:50:10,129 ******************************************************************************** 2026-04-14T17:50:10,131 !! 2026-04-14T17:50:10,131 opt = self._enforce_underscore(opt, section) 2026-04-14T17:50:10,450 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:599: SetuptoolsDeprecationWarning: Invalid dash-separated key 'description-file' in 'metadata' (setup.cfg), please use the underscore name 'description_file' instead. 2026-04-14T17:50:10,450 !! 2026-04-14T17:50:10,451 ******************************************************************************** 2026-04-14T17:50:10,451 Usage of dash-separated 'description-file' will not be supported in future 2026-04-14T17:50:10,452 versions. Please use the underscore name 'description_file' instead. 2026-04-14T17:50:10,452 (Affected: abutils). 2026-04-14T17:50:10,453 Available configuration options are listed in: 2026-04-14T17:50:10,454 https://setuptools.pypa.io/en/latest/userguide/declarative_config.html 2026-04-14T17:50:10,455 This deprecation is overdue, please update your project and remove deprecated 2026-04-14T17:50:10,455 calls to avoid build errors in the future. 2026-04-14T17:50:10,456 See https://github.com/pypa/setuptools/discussions/5011 for details. 2026-04-14T17:50:10,456 ******************************************************************************** 2026-04-14T17:50:10,457 !! 2026-04-14T17:50:10,458 opt = self._enforce_underscore(opt, section) 2026-04-14T17:50:10,458 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-14T17:50:10,459 !! 2026-04-14T17:50:10,460 ******************************************************************************** 2026-04-14T17:50:10,460 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-14T17:50:10,462 License :: OSI Approved :: MIT License 2026-04-14T17:50:10,463 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-14T17:50:10,463 ******************************************************************************** 2026-04-14T17:50:10,464 !! 2026-04-14T17:50:10,465 self._finalize_license_expression() 2026-04-14T17:50:10,465 running bdist_wheel 2026-04-14T17:50:10,588 running build 2026-04-14T17:50:10,589 running build_py 2026-04-14T17:50:10,621 creating build/lib/abutils 2026-04-14T17:50:10,623 copying abutils/bin.py -> build/lib/abutils 2026-04-14T17:50:10,625 copying abutils/__init__.py -> build/lib/abutils 2026-04-14T17:50:10,627 copying abutils/version.py -> build/lib/abutils 2026-04-14T17:50:10,629 copying abutils/tl.py -> build/lib/abutils 2026-04-14T17:50:10,631 copying abutils/pl.py -> build/lib/abutils 2026-04-14T17:50:10,632 copying abutils/io.py -> build/lib/abutils 2026-04-14T17:50:10,635 copying abutils/log.py -> build/lib/abutils 2026-04-14T17:50:10,637 copying abutils/cl.py -> build/lib/abutils 2026-04-14T17:50:10,639 copying abutils/pp.py -> build/lib/abutils 2026-04-14T17:50:10,642 creating build/lib/abutils/utils 2026-04-14T17:50:10,643 copying abutils/utils/circos.py -> build/lib/abutils/utils 2026-04-14T17:50:10,645 copying abutils/utils/convert.py -> build/lib/abutils/utils 2026-04-14T17:50:10,647 copying abutils/utils/path.py -> build/lib/abutils/utils 2026-04-14T17:50:10,649 copying abutils/utils/__init__.py -> build/lib/abutils/utils 2026-04-14T17:50:10,651 copying abutils/utils/ssh_tunnel.py -> build/lib/abutils/utils 2026-04-14T17:50:10,653 copying abutils/utils/color.py -> build/lib/abutils/utils 2026-04-14T17:50:10,655 copying abutils/utils/jobs.py -> build/lib/abutils/utils 2026-04-14T17:50:10,658 copying abutils/utils/codons.py -> build/lib/abutils/utils 2026-04-14T17:50:10,659 copying abutils/utils/s3.py -> build/lib/abutils/utils 2026-04-14T17:50:10,662 copying abutils/utils/database.py -> build/lib/abutils/utils 2026-04-14T17:50:10,664 copying abutils/utils/log.py -> build/lib/abutils/utils 2026-04-14T17:50:10,666 copying abutils/utils/utilities.py -> build/lib/abutils/utils 2026-04-14T17:50:10,668 copying abutils/utils/click.py -> build/lib/abutils/utils 2026-04-14T17:50:10,670 copying abutils/utils/mongodb.py -> build/lib/abutils/utils 2026-04-14T17:50:10,672 copying abutils/utils/cluster.py -> build/lib/abutils/utils 2026-04-14T17:50:10,675 copying abutils/utils/germlines.py -> build/lib/abutils/utils 2026-04-14T17:50:10,677 copying abutils/utils/phylogeny.py -> build/lib/abutils/utils 2026-04-14T17:50:10,680 copying abutils/utils/decorators.py -> build/lib/abutils/utils 2026-04-14T17:50:10,682 copying abutils/utils/alignment.py -> build/lib/abutils/utils 2026-04-14T17:50:10,685 copying abutils/utils/seqio.py -> build/lib/abutils/utils 2026-04-14T17:50:10,688 copying abutils/utils/progbar.py -> build/lib/abutils/utils 2026-04-14T17:50:10,690 creating build/lib/abutils/tools 2026-04-14T17:50:10,691 copying abutils/tools/anarci.py -> build/lib/abutils/tools 2026-04-14T17:50:10,693 copying abutils/tools/clonify.py -> build/lib/abutils/tools 2026-04-14T17:50:10,696 copying abutils/tools/__init__.py -> build/lib/abutils/tools 2026-04-14T17:50:10,697 copying abutils/tools/cloning.py -> build/lib/abutils/tools 2026-04-14T17:50:10,699 copying abutils/tools/similarity.py -> build/lib/abutils/tools 2026-04-14T17:50:10,702 copying abutils/tools/log.py -> build/lib/abutils/tools 2026-04-14T17:50:10,704 copying abutils/tools/phylo.py -> build/lib/abutils/tools 2026-04-14T17:50:10,707 copying abutils/tools/search.py -> build/lib/abutils/tools 2026-04-14T17:50:10,709 copying abutils/tools/cluster.py -> build/lib/abutils/tools 2026-04-14T17:50:10,713 copying abutils/tools/alignment.py -> build/lib/abutils/tools 2026-04-14T17:50:10,716 copying abutils/tools/preprocessing.py -> build/lib/abutils/tools 2026-04-14T17:50:10,720 creating build/lib/abutils/tests 2026-04-14T17:50:10,721 copying abutils/tests/test_phylo.py -> build/lib/abutils/tests 2026-04-14T17:50:10,723 copying abutils/tests/test_io.py -> build/lib/abutils/tests 2026-04-14T17:50:10,726 copying abutils/tests/__init__.py -> build/lib/abutils/tests 2026-04-14T17:50:10,727 copying abutils/tests/test_color.py -> build/lib/abutils/tests 2026-04-14T17:50:10,729 copying abutils/tests/test_alignment.py -> build/lib/abutils/tests 2026-04-14T17:50:10,732 copying abutils/tests/test_preprocessing.py -> build/lib/abutils/tests 2026-04-14T17:50:10,734 copying abutils/tests/test_similarity.py -> build/lib/abutils/tests 2026-04-14T17:50:10,737 copying abutils/tests/test_cloning.py -> build/lib/abutils/tests 2026-04-14T17:50:10,739 copying abutils/tests/test_utilities.py -> build/lib/abutils/tests 2026-04-14T17:50:10,741 copying abutils/tests/test_cluster.py -> build/lib/abutils/tests 2026-04-14T17:50:10,743 copying abutils/tests/test_lineage.py -> build/lib/abutils/tests 2026-04-14T17:50:10,745 copying abutils/tests/test_plots.py -> build/lib/abutils/tests 2026-04-14T17:50:10,748 copying abutils/tests/test_clonify.py -> build/lib/abutils/tests 2026-04-14T17:50:10,750 copying abutils/tests/test_sequence.py -> build/lib/abutils/tests 2026-04-14T17:50:10,752 copying abutils/tests/test_pair.py -> build/lib/abutils/tests 2026-04-14T17:50:10,755 creating build/lib/abutils/core 2026-04-14T17:50:10,756 copying abutils/core/__init__.py -> build/lib/abutils/core 2026-04-14T17:50:10,758 copying abutils/core/pair.py -> build/lib/abutils/core 2026-04-14T17:50:10,761 copying abutils/core/lineage.py -> build/lib/abutils/core 2026-04-14T17:50:10,764 copying abutils/core/sequence.py -> build/lib/abutils/core 2026-04-14T17:50:10,768 creating build/lib/abutils/preprocess 2026-04-14T17:50:10,769 copying abutils/preprocess/__init__.py -> build/lib/abutils/preprocess 2026-04-14T17:50:10,771 copying abutils/preprocess/preprocess.py -> build/lib/abutils/preprocess 2026-04-14T17:50:10,774 creating build/lib/abutils/plots 2026-04-14T17:50:10,775 copying abutils/plots/ring.py -> build/lib/abutils/plots 2026-04-14T17:50:10,778 copying abutils/plots/ridge.py -> build/lib/abutils/plots 2026-04-14T17:50:10,780 copying abutils/plots/__init__.py -> build/lib/abutils/plots 2026-04-14T17:50:10,782 copying abutils/plots/base.py -> build/lib/abutils/plots 2026-04-14T17:50:10,784 copying abutils/plots/donut.py -> build/lib/abutils/plots 2026-04-14T17:50:10,787 copying abutils/plots/data.py -> build/lib/abutils/plots 2026-04-14T17:50:10,789 copying abutils/plots/lineage.py -> build/lib/abutils/plots 2026-04-14T17:50:10,791 copying abutils/plots/kde.py -> build/lib/abutils/plots 2026-04-14T17:50:10,794 copying abutils/plots/scatter.py -> build/lib/abutils/plots 2026-04-14T17:50:10,797 copying abutils/plots/summary.py -> build/lib/abutils/plots 2026-04-14T17:50:10,799 copying abutils/plots/heatmap.py -> build/lib/abutils/plots 2026-04-14T17:50:10,802 copying abutils/plots/bar.py -> build/lib/abutils/plots 2026-04-14T17:50:10,804 copying abutils/plots/utils.py -> build/lib/abutils/plots 2026-04-14T17:50:10,806 creating build/lib/abutils/plots/mixins 2026-04-14T17:50:10,807 copying abutils/plots/mixins/__init__.py -> build/lib/abutils/plots/mixins 2026-04-14T17:50:10,809 copying abutils/plots/mixins/hue.py -> build/lib/abutils/plots/mixins 2026-04-14T17:50:10,811 creating build/lib/abutils/plots/models 2026-04-14T17:50:10,812 copying abutils/plots/models/__init__.py -> build/lib/abutils/plots/models 2026-04-14T17:50:10,813 copying abutils/plots/models/data.py -> build/lib/abutils/plots/models 2026-04-14T17:50:10,816 running egg_info 2026-04-14T17:50:10,842 writing abutils.egg-info/PKG-INFO 2026-04-14T17:50:10,846 writing dependency_links to abutils.egg-info/dependency_links.txt 2026-04-14T17:50:10,848 writing requirements to abutils.egg-info/requires.txt 2026-04-14T17:50:10,849 writing top-level names to abutils.egg-info/top_level.txt 2026-04-14T17:50:10,889 reading manifest file 'abutils.egg-info/SOURCES.txt' 2026-04-14T17:50:10,901 reading manifest template 'MANIFEST.in' 2026-04-14T17:50:10,916 adding license file 'LICENSE' 2026-04-14T17:50:10,927 writing manifest file 'abutils.egg-info/SOURCES.txt' 2026-04-14T17:50:10,929 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'abutils.binaries' is absent from the `packages` configuration. 2026-04-14T17:50:10,930 !! 2026-04-14T17:50:10,931 ******************************************************************************** 2026-04-14T17:50:10,931 ############################ 2026-04-14T17:50:10,932 # Package would be ignored # 2026-04-14T17:50:10,933 ############################ 2026-04-14T17:50:10,933 Python recognizes 'abutils.binaries' as an importable package[^1], 2026-04-14T17:50:10,934 but it is absent from setuptools' `packages` configuration. 2026-04-14T17:50:10,935 This leads to an ambiguous overall configuration. If you want to distribute this 2026-04-14T17:50:10,936 package, please make sure that 'abutils.binaries' is explicitly added 2026-04-14T17:50:10,936 to the `packages` configuration field. 2026-04-14T17:50:10,937 Alternatively, you can also rely on setuptools' discovery methods 2026-04-14T17:50:10,937 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-04-14T17:50:10,938 instead of `find_packages(...)`/`find:`). 2026-04-14T17:50:10,939 You can read more about "package discovery" on setuptools documentation page: 2026-04-14T17:50:10,940 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-04-14T17:50:10,941 If you don't want 'abutils.binaries' to be distributed and are 2026-04-14T17:50:10,942 already explicitly excluding 'abutils.binaries' via 2026-04-14T17:50:10,942 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-04-14T17:50:10,943 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-04-14T17:50:10,944 combination with a more fine grained `package-data` configuration. 2026-04-14T17:50:10,945 You can read more about "package data files" on setuptools documentation page: 2026-04-14T17:50:10,946 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-04-14T17:50:10,947 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-04-14T17:50:10,947 even if it does not contain any `.py` files. 2026-04-14T17:50:10,948 On the other hand, currently there is no concept of package data 2026-04-14T17:50:10,948 directory, all directories are treated like packages. 2026-04-14T17:50:10,948 ******************************************************************************** 2026-04-14T17:50:10,949 !! 2026-04-14T17:50:10,950 check.warn(importable) 2026-04-14T17:50:10,950 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'abutils.binaries.mafft_darwin' is absent from the `packages` configuration. 2026-04-14T17:50:10,950 !! 2026-04-14T17:50:10,951 ******************************************************************************** 2026-04-14T17:50:10,952 ############################ 2026-04-14T17:50:10,952 # Package would be ignored # 2026-04-14T17:50:10,953 ############################ 2026-04-14T17:50:10,953 Python recognizes 'abutils.binaries.mafft_darwin' as an importable package[^1], 2026-04-14T17:50:10,954 but it is absent from setuptools' `packages` configuration. 2026-04-14T17:50:10,954 This leads to an ambiguous overall configuration. If you want to distribute this 2026-04-14T17:50:10,955 package, please make sure that 'abutils.binaries.mafft_darwin' is explicitly added 2026-04-14T17:50:10,955 to the `packages` configuration field. 2026-04-14T17:50:10,957 Alternatively, you can also rely on setuptools' discovery methods 2026-04-14T17:50:10,957 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-04-14T17:50:10,957 instead of `find_packages(...)`/`find:`). 2026-04-14T17:50:10,959 You can read more about "package discovery" on setuptools documentation page: 2026-04-14T17:50:10,960 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-04-14T17:50:10,961 If you don't want 'abutils.binaries.mafft_darwin' to be distributed and are 2026-04-14T17:50:10,961 already explicitly excluding 'abutils.binaries.mafft_darwin' via 2026-04-14T17:50:10,962 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-04-14T17:50:10,962 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-04-14T17:50:10,963 combination with a more fine grained `package-data` configuration. 2026-04-14T17:50:10,964 You can read more about "package data files" on setuptools documentation page: 2026-04-14T17:50:10,965 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-04-14T17:50:10,968 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-04-14T17:50:10,968 even if it does not contain any `.py` files. 2026-04-14T17:50:10,969 On the other hand, currently there is no concept of package data 2026-04-14T17:50:10,969 directory, all directories are treated like packages. 2026-04-14T17:50:10,970 ******************************************************************************** 2026-04-14T17:50:10,971 !! 2026-04-14T17:50:10,971 check.warn(importable) 2026-04-14T17:50:10,972 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'abutils.binaries.mafft_darwin.mafftdir.bin' is absent from the `packages` configuration. 2026-04-14T17:50:10,973 !! 2026-04-14T17:50:10,975 ******************************************************************************** 2026-04-14T17:50:10,975 ############################ 2026-04-14T17:50:10,976 # Package would be ignored # 2026-04-14T17:50:10,977 ############################ 2026-04-14T17:50:10,977 Python recognizes 'abutils.binaries.mafft_darwin.mafftdir.bin' as an importable package[^1], 2026-04-14T17:50:10,977 but it is absent from setuptools' `packages` configuration. 2026-04-14T17:50:10,978 This leads to an ambiguous overall configuration. If you want to distribute this 2026-04-14T17:50:10,979 package, please make sure that 'abutils.binaries.mafft_darwin.mafftdir.bin' is explicitly added 2026-04-14T17:50:10,980 to the `packages` configuration field. 2026-04-14T17:50:10,981 Alternatively, you can also rely on setuptools' discovery methods 2026-04-14T17:50:10,981 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-04-14T17:50:10,982 instead of `find_packages(...)`/`find:`). 2026-04-14T17:50:10,984 You can read more about "package discovery" on setuptools documentation page: 2026-04-14T17:50:10,989 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-04-14T17:50:10,991 If you don't want 'abutils.binaries.mafft_darwin.mafftdir.bin' to be distributed and are 2026-04-14T17:50:10,991 already explicitly excluding 'abutils.binaries.mafft_darwin.mafftdir.bin' via 2026-04-14T17:50:10,992 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-04-14T17:50:10,993 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-04-14T17:50:10,994 combination with a more fine grained `package-data` configuration. 2026-04-14T17:50:10,995 You can read more about "package data files" on setuptools documentation page: 2026-04-14T17:50:10,997 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-04-14T17:50:10,998 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-04-14T17:50:10,999 even if it does not contain any `.py` files. 2026-04-14T17:50:11,000 On the other hand, currently there is no concept of package data 2026-04-14T17:50:11,000 directory, all directories are treated like packages. 2026-04-14T17:50:11,001 ******************************************************************************** 2026-04-14T17:50:11,002 !! 2026-04-14T17:50:11,003 check.warn(importable) 2026-04-14T17:50:11,003 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'abutils.binaries.mafft_darwin.mafftdir.libexec' is absent from the `packages` configuration. 2026-04-14T17:50:11,004 !! 2026-04-14T17:50:11,005 ******************************************************************************** 2026-04-14T17:50:11,006 ############################ 2026-04-14T17:50:11,006 # Package would be ignored # 2026-04-14T17:50:11,007 ############################ 2026-04-14T17:50:11,007 Python recognizes 'abutils.binaries.mafft_darwin.mafftdir.libexec' as an importable package[^1], 2026-04-14T17:50:11,008 but it is absent from setuptools' `packages` configuration. 2026-04-14T17:50:11,009 This leads to an ambiguous overall configuration. If you want to distribute this 2026-04-14T17:50:11,010 package, please make sure that 'abutils.binaries.mafft_darwin.mafftdir.libexec' is explicitly added 2026-04-14T17:50:11,011 to the `packages` configuration field. 2026-04-14T17:50:11,012 Alternatively, you can also rely on setuptools' discovery methods 2026-04-14T17:50:11,013 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-04-14T17:50:11,013 instead of `find_packages(...)`/`find:`). 2026-04-14T17:50:11,015 You can read more about "package discovery" on setuptools documentation page: 2026-04-14T17:50:11,016 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-04-14T17:50:11,017 If you don't want 'abutils.binaries.mafft_darwin.mafftdir.libexec' to be distributed and are 2026-04-14T17:50:11,018 already explicitly excluding 'abutils.binaries.mafft_darwin.mafftdir.libexec' via 2026-04-14T17:50:11,018 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-04-14T17:50:11,018 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-04-14T17:50:11,019 combination with a more fine grained `package-data` configuration. 2026-04-14T17:50:11,020 You can read more about "package data files" on setuptools documentation page: 2026-04-14T17:50:11,021 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-04-14T17:50:11,022 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-04-14T17:50:11,022 even if it does not contain any `.py` files. 2026-04-14T17:50:11,023 On the other hand, currently there is no concept of package data 2026-04-14T17:50:11,023 directory, all directories are treated like packages. 2026-04-14T17:50:11,024 ******************************************************************************** 2026-04-14T17:50:11,025 !! 2026-04-14T17:50:11,025 check.warn(importable) 2026-04-14T17:50:11,025 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'abutils.binaries.mafft_linux' is absent from the `packages` configuration. 2026-04-14T17:50:11,026 !! 2026-04-14T17:50:11,027 ******************************************************************************** 2026-04-14T17:50:11,027 ############################ 2026-04-14T17:50:11,028 # Package would be ignored # 2026-04-14T17:50:11,029 ############################ 2026-04-14T17:50:11,029 Python recognizes 'abutils.binaries.mafft_linux' as an importable package[^1], 2026-04-14T17:50:11,030 but it is absent from setuptools' `packages` configuration. 2026-04-14T17:50:11,031 This leads to an ambiguous overall configuration. If you want to distribute this 2026-04-14T17:50:11,031 package, please make sure that 'abutils.binaries.mafft_linux' is explicitly added 2026-04-14T17:50:11,032 to the `packages` configuration field. 2026-04-14T17:50:11,033 Alternatively, you can also rely on setuptools' discovery methods 2026-04-14T17:50:11,034 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-04-14T17:50:11,035 instead of `find_packages(...)`/`find:`). 2026-04-14T17:50:11,036 You can read more about "package discovery" on setuptools documentation page: 2026-04-14T17:50:11,037 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-04-14T17:50:11,038 If you don't want 'abutils.binaries.mafft_linux' to be distributed and are 2026-04-14T17:50:11,039 already explicitly excluding 'abutils.binaries.mafft_linux' via 2026-04-14T17:50:11,039 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-04-14T17:50:11,040 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-04-14T17:50:11,040 combination with a more fine grained `package-data` configuration. 2026-04-14T17:50:11,041 You can read more about "package data files" on setuptools documentation page: 2026-04-14T17:50:11,043 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-04-14T17:50:11,045 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-04-14T17:50:11,045 even if it does not contain any `.py` files. 2026-04-14T17:50:11,046 On the other hand, currently there is no concept of package data 2026-04-14T17:50:11,047 directory, all directories are treated like packages. 2026-04-14T17:50:11,048 ******************************************************************************** 2026-04-14T17:50:11,048 !! 2026-04-14T17:50:11,049 check.warn(importable) 2026-04-14T17:50:11,049 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'abutils.binaries.mafft_linux.mafftdir.bin' is absent from the `packages` configuration. 2026-04-14T17:50:11,050 !! 2026-04-14T17:50:11,051 ******************************************************************************** 2026-04-14T17:50:11,051 ############################ 2026-04-14T17:50:11,051 # Package would be ignored # 2026-04-14T17:50:11,052 ############################ 2026-04-14T17:50:11,052 Python recognizes 'abutils.binaries.mafft_linux.mafftdir.bin' as an importable package[^1], 2026-04-14T17:50:11,053 but it is absent from setuptools' `packages` configuration. 2026-04-14T17:50:11,054 This leads to an ambiguous overall configuration. If you want to distribute this 2026-04-14T17:50:11,054 package, please make sure that 'abutils.binaries.mafft_linux.mafftdir.bin' is explicitly added 2026-04-14T17:50:11,055 to the `packages` configuration field. 2026-04-14T17:50:11,056 Alternatively, you can also rely on setuptools' discovery methods 2026-04-14T17:50:11,056 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-04-14T17:50:11,057 instead of `find_packages(...)`/`find:`). 2026-04-14T17:50:11,058 You can read more about "package discovery" on setuptools documentation page: 2026-04-14T17:50:11,059 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-04-14T17:50:11,076 If you don't want 'abutils.binaries.mafft_linux.mafftdir.bin' to be distributed and are 2026-04-14T17:50:11,078 already explicitly excluding 'abutils.binaries.mafft_linux.mafftdir.bin' via 2026-04-14T17:50:11,080 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-04-14T17:50:11,081 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-04-14T17:50:11,084 combination with a more fine grained `package-data` configuration. 2026-04-14T17:50:11,088 You can read more about "package data files" on setuptools documentation page: 2026-04-14T17:50:11,098 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-04-14T17:50:11,120 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-04-14T17:50:11,121 even if it does not contain any `.py` files. 2026-04-14T17:50:11,123 On the other hand, currently there is no concept of package data 2026-04-14T17:50:11,126 directory, all directories are treated like packages. 2026-04-14T17:50:11,136 ******************************************************************************** 2026-04-14T17:50:11,178 !! 2026-04-14T17:50:11,178 check.warn(importable) 2026-04-14T17:50:11,179 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'abutils.binaries.mafft_linux.mafftdir.libexec' is absent from the `packages` configuration. 2026-04-14T17:50:11,179 !! 2026-04-14T17:50:11,180 ******************************************************************************** 2026-04-14T17:50:11,181 ############################ 2026-04-14T17:50:11,181 # Package would be ignored # 2026-04-14T17:50:11,182 ############################ 2026-04-14T17:50:11,182 Python recognizes 'abutils.binaries.mafft_linux.mafftdir.libexec' as an importable package[^1], 2026-04-14T17:50:11,183 but it is absent from setuptools' `packages` configuration. 2026-04-14T17:50:11,184 This leads to an ambiguous overall configuration. If you want to distribute this 2026-04-14T17:50:11,185 package, please make sure that 'abutils.binaries.mafft_linux.mafftdir.libexec' is explicitly added 2026-04-14T17:50:11,188 to the `packages` configuration field. 2026-04-14T17:50:11,191 Alternatively, you can also rely on setuptools' discovery methods 2026-04-14T17:50:11,191 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-04-14T17:50:11,191 instead of `find_packages(...)`/`find:`). 2026-04-14T17:50:11,192 You can read more about "package discovery" on setuptools documentation page: 2026-04-14T17:50:11,194 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-04-14T17:50:11,195 If you don't want 'abutils.binaries.mafft_linux.mafftdir.libexec' to be distributed and are 2026-04-14T17:50:11,197 already explicitly excluding 'abutils.binaries.mafft_linux.mafftdir.libexec' via 2026-04-14T17:50:11,198 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-04-14T17:50:11,199 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-04-14T17:50:11,199 combination with a more fine grained `package-data` configuration. 2026-04-14T17:50:11,200 You can read more about "package data files" on setuptools documentation page: 2026-04-14T17:50:11,201 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-04-14T17:50:11,202 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-04-14T17:50:11,204 even if it does not contain any `.py` files. 2026-04-14T17:50:11,207 On the other hand, currently there is no concept of package data 2026-04-14T17:50:11,208 directory, all directories are treated like packages. 2026-04-14T17:50:11,208 ******************************************************************************** 2026-04-14T17:50:11,209 !! 2026-04-14T17:50:11,210 check.warn(importable) 2026-04-14T17:50:11,211 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'abutils.utils.matrices' is absent from the `packages` configuration. 2026-04-14T17:50:11,213 !! 2026-04-14T17:50:11,214 ******************************************************************************** 2026-04-14T17:50:11,215 ############################ 2026-04-14T17:50:11,215 # Package would be ignored # 2026-04-14T17:50:11,216 ############################ 2026-04-14T17:50:11,217 Python recognizes 'abutils.utils.matrices' as an importable package[^1], 2026-04-14T17:50:11,223 but it is absent from setuptools' `packages` configuration. 2026-04-14T17:50:11,235 This leads to an ambiguous overall configuration. If you want to distribute this 2026-04-14T17:50:11,237 package, please make sure that 'abutils.utils.matrices' is explicitly added 2026-04-14T17:50:11,238 to the `packages` configuration field. 2026-04-14T17:50:11,239 Alternatively, you can also rely on setuptools' discovery methods 2026-04-14T17:50:11,239 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-04-14T17:50:11,240 instead of `find_packages(...)`/`find:`). 2026-04-14T17:50:11,241 You can read more about "package discovery" on setuptools documentation page: 2026-04-14T17:50:11,242 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-04-14T17:50:11,243 If you don't want 'abutils.utils.matrices' to be distributed and are 2026-04-14T17:50:11,244 already explicitly excluding 'abutils.utils.matrices' via 2026-04-14T17:50:11,244 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-04-14T17:50:11,245 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-04-14T17:50:11,245 combination with a more fine grained `package-data` configuration. 2026-04-14T17:50:11,247 You can read more about "package data files" on setuptools documentation page: 2026-04-14T17:50:11,248 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-04-14T17:50:11,249 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-04-14T17:50:11,249 even if it does not contain any `.py` files. 2026-04-14T17:50:11,250 On the other hand, currently there is no concept of package data 2026-04-14T17:50:11,250 directory, all directories are treated like packages. 2026-04-14T17:50:11,251 ******************************************************************************** 2026-04-14T17:50:11,251 !! 2026-04-14T17:50:11,252 check.warn(importable) 2026-04-14T17:50:11,252 creating build/lib/abutils/binaries 2026-04-14T17:50:11,253 copying abutils/binaries/cdhit_darwin_amd64 -> build/lib/abutils/binaries 2026-04-14T17:50:11,253 copying abutils/binaries/cdhit_darwin_arm64 -> build/lib/abutils/binaries 2026-04-14T17:50:11,254 copying abutils/binaries/cdhit_linux_amd64 -> build/lib/abutils/binaries 2026-04-14T17:50:11,254 copying abutils/binaries/fastp_darwin -> build/lib/abutils/binaries 2026-04-14T17:50:11,255 copying abutils/binaries/fastp_linux -> build/lib/abutils/binaries 2026-04-14T17:50:11,255 copying abutils/binaries/fasttree_darwin_amd64 -> build/lib/abutils/binaries 2026-04-14T17:50:11,255 copying abutils/binaries/fasttree_darwin_arm64 -> build/lib/abutils/binaries 2026-04-14T17:50:11,256 copying abutils/binaries/fasttree_linux_amd64 -> build/lib/abutils/binaries 2026-04-14T17:50:11,256 copying abutils/binaries/minimap2_darwin_arm64 -> build/lib/abutils/binaries 2026-04-14T17:50:11,257 copying abutils/binaries/minimap2_linux_amd64 -> build/lib/abutils/binaries 2026-04-14T17:50:11,257 copying abutils/binaries/mmseqs_darwin_amd64 -> build/lib/abutils/binaries 2026-04-14T17:50:11,345 copying abutils/binaries/mmseqs_darwin_arm64 -> build/lib/abutils/binaries 2026-04-14T17:50:11,907 copying abutils/binaries/mmseqs_linux_amd64 -> build/lib/abutils/binaries 2026-04-14T17:50:12,995 copying abutils/binaries/muscle3_darwin -> build/lib/abutils/binaries 2026-04-14T17:50:13,005 copying abutils/binaries/muscle3_linux -> build/lib/abutils/binaries 2026-04-14T17:50:13,015 copying abutils/binaries/muscle_darwin_amd64 -> build/lib/abutils/binaries 2026-04-14T17:50:13,038 copying abutils/binaries/muscle_darwin_arm64 -> build/lib/abutils/binaries 2026-04-14T17:50:13,057 copying abutils/binaries/muscle_linux_amd64 -> build/lib/abutils/binaries 2026-04-14T17:50:13,123 copying abutils/binaries/sickle_darwin_arm64 -> build/lib/abutils/binaries 2026-04-14T17:50:13,127 copying abutils/binaries/sickle_linux_amd64 -> build/lib/abutils/binaries 2026-04-14T17:50:13,130 copying abutils/binaries/vsearch_darwin_amd64 -> build/lib/abutils/binaries 2026-04-14T17:50:13,144 copying abutils/binaries/vsearch_darwin_arm64 -> build/lib/abutils/binaries 2026-04-14T17:50:13,155 copying abutils/binaries/vsearch_linux_amd64 -> build/lib/abutils/binaries 2026-04-14T17:50:13,195 creating build/lib/abutils/binaries/mafft_darwin 2026-04-14T17:50:13,196 copying abutils/binaries/mafft_darwin/mafft.bat -> build/lib/abutils/binaries/mafft_darwin 2026-04-14T17:50:13,198 creating build/lib/abutils/binaries/mafft_darwin/mafftdir/bin 2026-04-14T17:50:13,200 copying abutils/binaries/mafft_darwin/mafftdir/bin/mafft -> build/lib/abutils/binaries/mafft_darwin/mafftdir/bin 2026-04-14T17:50:13,204 creating build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:13,205 copying abutils/binaries/mafft_darwin/mafftdir/libexec/addsingle -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:13,235 copying abutils/binaries/mafft_darwin/mafftdir/libexec/contrafoldwrap -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:13,254 copying abutils/binaries/mafft_darwin/mafftdir/libexec/countlen -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:13,265 copying abutils/binaries/mafft_darwin/mafftdir/libexec/dash_client -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:13,492 copying abutils/binaries/mafft_darwin/mafftdir/libexec/disttbfast -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:13,522 copying abutils/binaries/mafft_darwin/mafftdir/libexec/dndblast -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:13,541 copying abutils/binaries/mafft_darwin/mafftdir/libexec/dndfast7 -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:13,560 copying abutils/binaries/mafft_darwin/mafftdir/libexec/dndpre -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:13,579 copying abutils/binaries/mafft_darwin/mafftdir/libexec/dvtditr -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:13,656 copying abutils/binaries/mafft_darwin/mafftdir/libexec/f2cl -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:13,670 copying abutils/binaries/mafft_darwin/mafftdir/libexec/filter -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:13,686 copying abutils/binaries/mafft_darwin/mafftdir/libexec/getlag -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:13,712 copying abutils/binaries/mafft_darwin/mafftdir/libexec/hex2maffttext -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:13,718 copying abutils/binaries/mafft_darwin/mafftdir/libexec/mafft-distance -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:13,736 copying abutils/binaries/mafft_darwin/mafftdir/libexec/mafft-homologs.1 -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:13,739 copying abutils/binaries/mafft_darwin/mafftdir/libexec/mafft-profile -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:13,771 copying abutils/binaries/mafft_darwin/mafftdir/libexec/mafft.1 -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:13,774 copying abutils/binaries/mafft_darwin/mafftdir/libexec/mafftash_premafft.pl -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:13,777 copying abutils/binaries/mafft_darwin/mafftdir/libexec/maffttext2hex -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:13,783 copying abutils/binaries/mafft_darwin/mafftdir/libexec/makedirectionlist -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:13,811 copying abutils/binaries/mafft_darwin/mafftdir/libexec/mccaskillwrap -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:13,831 copying abutils/binaries/mafft_darwin/mafftdir/libexec/multi2hat3s -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:13,847 copying abutils/binaries/mafft_darwin/mafftdir/libexec/nodepair -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:13,875 copying abutils/binaries/mafft_darwin/mafftdir/libexec/pairash -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:13,901 copying abutils/binaries/mafft_darwin/mafftdir/libexec/pairlocalalign -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:13,932 copying abutils/binaries/mafft_darwin/mafftdir/libexec/regtable2seq -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:13,948 copying abutils/binaries/mafft_darwin/mafftdir/libexec/replaceu -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:13,963 copying abutils/binaries/mafft_darwin/mafftdir/libexec/restoreu -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:13,978 copying abutils/binaries/mafft_darwin/mafftdir/libexec/score -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:13,995 copying abutils/binaries/mafft_darwin/mafftdir/libexec/seekquencer_premafft.pl -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:13,997 copying abutils/binaries/mafft_darwin/mafftdir/libexec/seq2regtable -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:14,008 copying abutils/binaries/mafft_darwin/mafftdir/libexec/setcore -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:14,040 copying abutils/binaries/mafft_darwin/mafftdir/libexec/setdirection -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:14,056 copying abutils/binaries/mafft_darwin/mafftdir/libexec/sextet5 -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:14,079 copying abutils/binaries/mafft_darwin/mafftdir/libexec/splittbfast -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:14,106 copying abutils/binaries/mafft_darwin/mafftdir/libexec/tbfast -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:14,142 copying abutils/binaries/mafft_darwin/mafftdir/libexec/version -> build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:14,148 creating build/lib/abutils/binaries/mafft_linux 2026-04-14T17:50:14,149 copying abutils/binaries/mafft_linux/mafft.bat -> build/lib/abutils/binaries/mafft_linux 2026-04-14T17:50:14,151 creating build/lib/abutils/binaries/mafft_linux/mafftdir/bin 2026-04-14T17:50:14,153 copying abutils/binaries/mafft_linux/mafftdir/bin/mafft -> build/lib/abutils/binaries/mafft_linux/mafftdir/bin 2026-04-14T17:50:14,158 creating build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,159 copying abutils/binaries/mafft_linux/mafftdir/libexec/addsingle -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,182 copying abutils/binaries/mafft_linux/mafftdir/libexec/contrafoldwrap -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,199 copying abutils/binaries/mafft_linux/mafftdir/libexec/countlen -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,210 copying abutils/binaries/mafft_linux/mafftdir/libexec/dash_alignments -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,215 copying abutils/binaries/mafft_linux/mafftdir/libexec/dash_client -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,278 copying abutils/binaries/mafft_linux/mafftdir/libexec/dash_sequences.fa -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,281 copying abutils/binaries/mafft_linux/mafftdir/libexec/disttbfast -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,307 copying abutils/binaries/mafft_linux/mafftdir/libexec/dndblast -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,326 copying abutils/binaries/mafft_linux/mafftdir/libexec/dndfast7 -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,345 copying abutils/binaries/mafft_linux/mafftdir/libexec/dndpre -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,362 copying abutils/binaries/mafft_linux/mafftdir/libexec/dvtditr -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,385 copying abutils/binaries/mafft_linux/mafftdir/libexec/f2cl -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,400 copying abutils/binaries/mafft_linux/mafftdir/libexec/filter -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,416 copying abutils/binaries/mafft_linux/mafftdir/libexec/getlag -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,436 copying abutils/binaries/mafft_linux/mafftdir/libexec/hat3 -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,437 copying abutils/binaries/mafft_linux/mafftdir/libexec/hex2maffttext -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,448 copying abutils/binaries/mafft_linux/mafftdir/libexec/mafft-distance -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,466 copying abutils/binaries/mafft_linux/mafftdir/libexec/mafft-homologs.1 -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,469 copying abutils/binaries/mafft_linux/mafftdir/libexec/mafft-profile -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,490 copying abutils/binaries/mafft_linux/mafftdir/libexec/mafft.1 -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,493 copying abutils/binaries/mafft_linux/mafftdir/libexec/mafftash_premafft.pl -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,496 copying abutils/binaries/mafft_linux/mafftdir/libexec/maffttext2hex -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,507 copying abutils/binaries/mafft_linux/mafftdir/libexec/makedirectionlist -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,527 copying abutils/binaries/mafft_linux/mafftdir/libexec/mccaskillwrap -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,542 copying abutils/binaries/mafft_linux/mafftdir/libexec/multi2hat3s -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,558 copying abutils/binaries/mafft_linux/mafftdir/libexec/nodepair -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,582 copying abutils/binaries/mafft_linux/mafftdir/libexec/pairash -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,602 copying abutils/binaries/mafft_linux/mafftdir/libexec/pairlocalalign -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,627 copying abutils/binaries/mafft_linux/mafftdir/libexec/regtable2seq -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,654 copying abutils/binaries/mafft_linux/mafftdir/libexec/replaceu -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,675 copying abutils/binaries/mafft_linux/mafftdir/libexec/restoreu -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,697 copying abutils/binaries/mafft_linux/mafftdir/libexec/score -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,721 copying abutils/binaries/mafft_linux/mafftdir/libexec/seekquencer_premafft.pl -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,725 copying abutils/binaries/mafft_linux/mafftdir/libexec/seq2regtable -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,737 copying abutils/binaries/mafft_linux/mafftdir/libexec/setcore -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,761 copying abutils/binaries/mafft_linux/mafftdir/libexec/setdirection -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,777 copying abutils/binaries/mafft_linux/mafftdir/libexec/sextet5 -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,794 copying abutils/binaries/mafft_linux/mafftdir/libexec/splittbfast -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,813 copying abutils/binaries/mafft_linux/mafftdir/libexec/tbfast -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,836 copying abutils/binaries/mafft_linux/mafftdir/libexec/version -> build/lib/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:14,847 creating build/lib/abutils/utils/matrices 2026-04-14T17:50:14,848 copying abutils/utils/matrices/blosum62 -> build/lib/abutils/utils/matrices 2026-04-14T17:50:14,851 copying abutils/utils/matrices/match1mismatch0 -> build/lib/abutils/utils/matrices 2026-04-14T17:50:14,853 copying abutils/utils/matrices/match3mismatch2 -> build/lib/abutils/utils/matrices 2026-04-14T17:50:14,887 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2026-04-14T17:50:14,888 !! 2026-04-14T17:50:14,889 ******************************************************************************** 2026-04-14T17:50:14,890 Please avoid running ``setup.py`` directly. 2026-04-14T17:50:14,890 Instead, use pypa/build, pypa/installer or other 2026-04-14T17:50:14,891 standards-based tools. 2026-04-14T17:50:14,892 This deprecation is overdue, please update your project and remove deprecated 2026-04-14T17:50:14,892 calls to avoid build errors in the future. 2026-04-14T17:50:14,894 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2026-04-14T17:50:14,894 ******************************************************************************** 2026-04-14T17:50:14,895 !! 2026-04-14T17:50:14,895 self.initialize_options() 2026-04-14T17:50:14,914 installing to build/bdist.linux-armv7l/wheel 2026-04-14T17:50:14,915 running install 2026-04-14T17:50:14,938 running install_lib 2026-04-14T17:50:14,966 creating build/bdist.linux-armv7l/wheel 2026-04-14T17:50:14,968 creating build/bdist.linux-armv7l/wheel/abutils 2026-04-14T17:50:14,969 copying build/lib/abutils/bin.py -> build/bdist.linux-armv7l/wheel/./abutils 2026-04-14T17:50:14,972 creating build/bdist.linux-armv7l/wheel/abutils/utils 2026-04-14T17:50:14,973 copying build/lib/abutils/utils/circos.py -> build/bdist.linux-armv7l/wheel/./abutils/utils 2026-04-14T17:50:14,975 copying build/lib/abutils/utils/convert.py -> build/bdist.linux-armv7l/wheel/./abutils/utils 2026-04-14T17:50:14,976 copying build/lib/abutils/utils/path.py -> build/bdist.linux-armv7l/wheel/./abutils/utils 2026-04-14T17:50:14,978 copying build/lib/abutils/utils/__init__.py -> build/bdist.linux-armv7l/wheel/./abutils/utils 2026-04-14T17:50:14,980 copying build/lib/abutils/utils/ssh_tunnel.py -> build/bdist.linux-armv7l/wheel/./abutils/utils 2026-04-14T17:50:14,982 copying build/lib/abutils/utils/color.py -> build/bdist.linux-armv7l/wheel/./abutils/utils 2026-04-14T17:50:14,984 copying build/lib/abutils/utils/jobs.py -> build/bdist.linux-armv7l/wheel/./abutils/utils 2026-04-14T17:50:14,987 copying build/lib/abutils/utils/codons.py -> build/bdist.linux-armv7l/wheel/./abutils/utils 2026-04-14T17:50:14,989 copying build/lib/abutils/utils/s3.py -> build/bdist.linux-armv7l/wheel/./abutils/utils 2026-04-14T17:50:14,991 copying build/lib/abutils/utils/database.py -> build/bdist.linux-armv7l/wheel/./abutils/utils 2026-04-14T17:50:14,993 copying build/lib/abutils/utils/log.py -> build/bdist.linux-armv7l/wheel/./abutils/utils 2026-04-14T17:50:14,995 copying build/lib/abutils/utils/utilities.py -> build/bdist.linux-armv7l/wheel/./abutils/utils 2026-04-14T17:50:14,997 copying build/lib/abutils/utils/click.py -> build/bdist.linux-armv7l/wheel/./abutils/utils 2026-04-14T17:50:14,999 copying build/lib/abutils/utils/mongodb.py -> build/bdist.linux-armv7l/wheel/./abutils/utils 2026-04-14T17:50:15,001 copying build/lib/abutils/utils/cluster.py -> build/bdist.linux-armv7l/wheel/./abutils/utils 2026-04-14T17:50:15,004 copying build/lib/abutils/utils/germlines.py -> build/bdist.linux-armv7l/wheel/./abutils/utils 2026-04-14T17:50:15,007 copying build/lib/abutils/utils/phylogeny.py -> build/bdist.linux-armv7l/wheel/./abutils/utils 2026-04-14T17:50:15,009 copying build/lib/abutils/utils/decorators.py -> build/bdist.linux-armv7l/wheel/./abutils/utils 2026-04-14T17:50:15,011 copying build/lib/abutils/utils/alignment.py -> build/bdist.linux-armv7l/wheel/./abutils/utils 2026-04-14T17:50:15,015 copying build/lib/abutils/utils/seqio.py -> build/bdist.linux-armv7l/wheel/./abutils/utils 2026-04-14T17:50:15,017 copying build/lib/abutils/utils/progbar.py -> build/bdist.linux-armv7l/wheel/./abutils/utils 2026-04-14T17:50:15,020 creating build/bdist.linux-armv7l/wheel/abutils/utils/matrices 2026-04-14T17:50:15,021 copying build/lib/abutils/utils/matrices/match3mismatch2 -> build/bdist.linux-armv7l/wheel/./abutils/utils/matrices 2026-04-14T17:50:15,023 copying build/lib/abutils/utils/matrices/blosum62 -> build/bdist.linux-armv7l/wheel/./abutils/utils/matrices 2026-04-14T17:50:15,025 copying build/lib/abutils/utils/matrices/match1mismatch0 -> build/bdist.linux-armv7l/wheel/./abutils/utils/matrices 2026-04-14T17:50:15,027 copying build/lib/abutils/__init__.py -> build/bdist.linux-armv7l/wheel/./abutils 2026-04-14T17:50:15,029 copying build/lib/abutils/version.py -> build/bdist.linux-armv7l/wheel/./abutils 2026-04-14T17:50:15,031 copying build/lib/abutils/tl.py -> build/bdist.linux-armv7l/wheel/./abutils 2026-04-14T17:50:15,033 creating build/bdist.linux-armv7l/wheel/abutils/tools 2026-04-14T17:50:15,034 copying build/lib/abutils/tools/anarci.py -> build/bdist.linux-armv7l/wheel/./abutils/tools 2026-04-14T17:50:15,036 copying build/lib/abutils/tools/clonify.py -> build/bdist.linux-armv7l/wheel/./abutils/tools 2026-04-14T17:50:15,039 copying build/lib/abutils/tools/__init__.py -> build/bdist.linux-armv7l/wheel/./abutils/tools 2026-04-14T17:50:15,040 copying build/lib/abutils/tools/cloning.py -> build/bdist.linux-armv7l/wheel/./abutils/tools 2026-04-14T17:50:15,043 copying build/lib/abutils/tools/similarity.py -> build/bdist.linux-armv7l/wheel/./abutils/tools 2026-04-14T17:50:15,046 copying build/lib/abutils/tools/log.py -> build/bdist.linux-armv7l/wheel/./abutils/tools 2026-04-14T17:50:15,048 copying build/lib/abutils/tools/phylo.py -> build/bdist.linux-armv7l/wheel/./abutils/tools 2026-04-14T17:50:15,051 copying build/lib/abutils/tools/search.py -> build/bdist.linux-armv7l/wheel/./abutils/tools 2026-04-14T17:50:15,054 copying build/lib/abutils/tools/cluster.py -> build/bdist.linux-armv7l/wheel/./abutils/tools 2026-04-14T17:50:15,057 copying build/lib/abutils/tools/alignment.py -> build/bdist.linux-armv7l/wheel/./abutils/tools 2026-04-14T17:50:15,060 copying build/lib/abutils/tools/preprocessing.py -> build/bdist.linux-armv7l/wheel/./abutils/tools 2026-04-14T17:50:15,063 copying build/lib/abutils/pl.py -> build/bdist.linux-armv7l/wheel/./abutils 2026-04-14T17:50:15,066 creating build/bdist.linux-armv7l/wheel/abutils/tests 2026-04-14T17:50:15,067 copying build/lib/abutils/tests/test_phylo.py -> build/bdist.linux-armv7l/wheel/./abutils/tests 2026-04-14T17:50:15,069 copying build/lib/abutils/tests/test_io.py -> build/bdist.linux-armv7l/wheel/./abutils/tests 2026-04-14T17:50:15,072 copying build/lib/abutils/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./abutils/tests 2026-04-14T17:50:15,074 copying build/lib/abutils/tests/test_color.py -> build/bdist.linux-armv7l/wheel/./abutils/tests 2026-04-14T17:50:15,076 copying build/lib/abutils/tests/test_alignment.py -> build/bdist.linux-armv7l/wheel/./abutils/tests 2026-04-14T17:50:15,079 copying build/lib/abutils/tests/test_preprocessing.py -> build/bdist.linux-armv7l/wheel/./abutils/tests 2026-04-14T17:50:15,082 copying build/lib/abutils/tests/test_similarity.py -> build/bdist.linux-armv7l/wheel/./abutils/tests 2026-04-14T17:50:15,084 copying build/lib/abutils/tests/test_cloning.py -> build/bdist.linux-armv7l/wheel/./abutils/tests 2026-04-14T17:50:15,086 copying build/lib/abutils/tests/test_utilities.py -> build/bdist.linux-armv7l/wheel/./abutils/tests 2026-04-14T17:50:15,088 copying build/lib/abutils/tests/test_cluster.py -> build/bdist.linux-armv7l/wheel/./abutils/tests 2026-04-14T17:50:15,090 copying build/lib/abutils/tests/test_lineage.py -> build/bdist.linux-armv7l/wheel/./abutils/tests 2026-04-14T17:50:15,093 copying build/lib/abutils/tests/test_plots.py -> build/bdist.linux-armv7l/wheel/./abutils/tests 2026-04-14T17:50:15,095 copying build/lib/abutils/tests/test_clonify.py -> build/bdist.linux-armv7l/wheel/./abutils/tests 2026-04-14T17:50:15,097 copying build/lib/abutils/tests/test_sequence.py -> build/bdist.linux-armv7l/wheel/./abutils/tests 2026-04-14T17:50:15,100 copying build/lib/abutils/tests/test_pair.py -> build/bdist.linux-armv7l/wheel/./abutils/tests 2026-04-14T17:50:15,103 creating build/bdist.linux-armv7l/wheel/abutils/core 2026-04-14T17:50:15,104 copying build/lib/abutils/core/__init__.py -> build/bdist.linux-armv7l/wheel/./abutils/core 2026-04-14T17:50:15,107 copying build/lib/abutils/core/pair.py -> build/bdist.linux-armv7l/wheel/./abutils/core 2026-04-14T17:50:15,110 copying build/lib/abutils/core/lineage.py -> build/bdist.linux-armv7l/wheel/./abutils/core 2026-04-14T17:50:15,113 copying build/lib/abutils/core/sequence.py -> build/bdist.linux-armv7l/wheel/./abutils/core 2026-04-14T17:50:15,116 copying build/lib/abutils/io.py -> build/bdist.linux-armv7l/wheel/./abutils 2026-04-14T17:50:15,119 copying build/lib/abutils/log.py -> build/bdist.linux-armv7l/wheel/./abutils 2026-04-14T17:50:15,121 copying build/lib/abutils/cl.py -> build/bdist.linux-armv7l/wheel/./abutils 2026-04-14T17:50:15,123 copying build/lib/abutils/pp.py -> build/bdist.linux-armv7l/wheel/./abutils 2026-04-14T17:50:15,126 creating build/bdist.linux-armv7l/wheel/abutils/preprocess 2026-04-14T17:50:15,127 copying build/lib/abutils/preprocess/__init__.py -> build/bdist.linux-armv7l/wheel/./abutils/preprocess 2026-04-14T17:50:15,128 copying build/lib/abutils/preprocess/preprocess.py -> build/bdist.linux-armv7l/wheel/./abutils/preprocess 2026-04-14T17:50:15,132 creating build/bdist.linux-armv7l/wheel/abutils/binaries 2026-04-14T17:50:15,133 copying build/lib/abutils/binaries/fastp_darwin -> build/bdist.linux-armv7l/wheel/./abutils/binaries 2026-04-14T17:50:15,147 copying build/lib/abutils/binaries/muscle3_linux -> build/bdist.linux-armv7l/wheel/./abutils/binaries 2026-04-14T17:50:15,155 copying build/lib/abutils/binaries/muscle_linux_amd64 -> build/bdist.linux-armv7l/wheel/./abutils/binaries 2026-04-14T17:50:15,200 copying build/lib/abutils/binaries/muscle_darwin_arm64 -> build/bdist.linux-armv7l/wheel/./abutils/binaries 2026-04-14T17:50:15,216 copying build/lib/abutils/binaries/minimap2_darwin_arm64 -> build/bdist.linux-armv7l/wheel/./abutils/binaries 2026-04-14T17:50:15,221 copying build/lib/abutils/binaries/fastp_linux -> build/bdist.linux-armv7l/wheel/./abutils/binaries 2026-04-14T17:50:15,392 creating build/bdist.linux-armv7l/wheel/abutils/binaries/mafft_linux 2026-04-14T17:50:15,393 creating build/bdist.linux-armv7l/wheel/abutils/binaries/mafft_linux/mafftdir 2026-04-14T17:50:15,395 creating build/bdist.linux-armv7l/wheel/abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:15,396 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/score -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:15,413 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/dvtditr -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:15,442 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/tbfast -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:15,473 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/getlag -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:15,501 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/splittbfast -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:15,528 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/version -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:15,538 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/dndfast7 -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:15,557 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/countlen -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:15,569 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/pairash -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:15,588 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/dndpre -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:15,606 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/dash_client -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:15,670 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/addsingle -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:15,691 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/replaceu -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:15,705 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/setdirection -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:15,721 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/mafft-homologs.1 -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:15,723 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/hat3 -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:15,724 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/restoreu -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:15,740 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/setcore -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:15,765 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/mccaskillwrap -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:15,780 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/contrafoldwrap -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:15,799 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/mafftash_premafft.pl -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:15,802 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/dash_sequences.fa -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:15,805 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/mafft.1 -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:15,808 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/pairlocalalign -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:15,829 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/mafft-distance -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:15,847 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/mafft-profile -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:15,868 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/f2cl -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:15,881 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/seq2regtable -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:15,893 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/filter -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:15,907 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/disttbfast -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:15,932 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/nodepair -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:15,954 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/sextet5 -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:15,970 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/makedirectionlist -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:15,990 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/multi2hat3s -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:16,007 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/hex2maffttext -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:16,017 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/maffttext2hex -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:16,026 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/dndblast -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:16,044 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/seekquencer_premafft.pl -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:16,046 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/dash_alignments -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:16,050 copying build/lib/abutils/binaries/mafft_linux/mafftdir/libexec/regtable2seq -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/libexec 2026-04-14T17:50:16,065 creating build/bdist.linux-armv7l/wheel/abutils/binaries/mafft_linux/mafftdir/bin 2026-04-14T17:50:16,066 copying build/lib/abutils/binaries/mafft_linux/mafftdir/bin/mafft -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux/mafftdir/bin 2026-04-14T17:50:16,070 copying build/lib/abutils/binaries/mafft_linux/mafft.bat -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_linux 2026-04-14T17:50:16,072 copying build/lib/abutils/binaries/vsearch_darwin_arm64 -> build/bdist.linux-armv7l/wheel/./abutils/binaries 2026-04-14T17:50:16,082 copying build/lib/abutils/binaries/cdhit_darwin_arm64 -> build/bdist.linux-armv7l/wheel/./abutils/binaries 2026-04-14T17:50:16,087 copying build/lib/abutils/binaries/mmseqs_linux_amd64 -> build/bdist.linux-armv7l/wheel/./abutils/binaries 2026-04-14T17:50:17,948 copying build/lib/abutils/binaries/cdhit_linux_amd64 -> build/bdist.linux-armv7l/wheel/./abutils/binaries 2026-04-14T17:50:17,952 copying build/lib/abutils/binaries/sickle_linux_amd64 -> build/bdist.linux-armv7l/wheel/./abutils/binaries 2026-04-14T17:50:17,955 copying build/lib/abutils/binaries/fasttree_darwin_amd64 -> build/bdist.linux-armv7l/wheel/./abutils/binaries 2026-04-14T17:50:17,962 copying build/lib/abutils/binaries/cdhit_darwin_amd64 -> build/bdist.linux-armv7l/wheel/./abutils/binaries 2026-04-14T17:50:17,966 copying build/lib/abutils/binaries/mmseqs_darwin_arm64 -> build/bdist.linux-armv7l/wheel/./abutils/binaries 2026-04-14T17:50:18,550 copying build/lib/abutils/binaries/vsearch_linux_amd64 -> build/bdist.linux-armv7l/wheel/./abutils/binaries 2026-04-14T17:50:18,579 copying build/lib/abutils/binaries/fasttree_linux_amd64 -> build/bdist.linux-armv7l/wheel/./abutils/binaries 2026-04-14T17:50:18,588 creating build/bdist.linux-armv7l/wheel/abutils/binaries/mafft_darwin 2026-04-14T17:50:18,589 creating build/bdist.linux-armv7l/wheel/abutils/binaries/mafft_darwin/mafftdir 2026-04-14T17:50:18,591 creating build/bdist.linux-armv7l/wheel/abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:18,592 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/score -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:18,607 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/dvtditr -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:18,633 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/tbfast -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:18,661 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/getlag -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:18,686 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/splittbfast -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:18,714 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/version -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:18,719 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/dndfast7 -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:18,736 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/countlen -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:18,743 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/pairash -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:18,770 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/dndpre -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:18,785 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/dash_client -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:18,987 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/addsingle -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:19,012 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/replaceu -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:19,026 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/setdirection -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:19,040 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/mafft-homologs.1 -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:19,042 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/restoreu -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:19,055 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/setcore -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:19,087 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/mccaskillwrap -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:19,103 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/contrafoldwrap -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:19,117 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/mafftash_premafft.pl -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:19,119 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/mafft.1 -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:19,122 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/pairlocalalign -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:19,149 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/mafft-distance -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:19,167 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/mafft-profile -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:19,194 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/f2cl -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:19,204 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/seq2regtable -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:19,212 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/filter -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:19,226 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/disttbfast -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:19,252 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/nodepair -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:19,276 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/sextet5 -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:19,293 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/makedirectionlist -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:19,320 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/multi2hat3s -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:19,339 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/hex2maffttext -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:19,344 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/maffttext2hex -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:19,350 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/dndblast -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:19,366 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/seekquencer_premafft.pl -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:19,369 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/libexec/regtable2seq -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/libexec 2026-04-14T17:50:19,383 creating build/bdist.linux-armv7l/wheel/abutils/binaries/mafft_darwin/mafftdir/bin 2026-04-14T17:50:19,384 copying build/lib/abutils/binaries/mafft_darwin/mafftdir/bin/mafft -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin/mafftdir/bin 2026-04-14T17:50:19,388 copying build/lib/abutils/binaries/mafft_darwin/mafft.bat -> build/bdist.linux-armv7l/wheel/./abutils/binaries/mafft_darwin 2026-04-14T17:50:19,390 copying build/lib/abutils/binaries/minimap2_linux_amd64 -> build/bdist.linux-armv7l/wheel/./abutils/binaries 2026-04-14T17:50:19,411 copying build/lib/abutils/binaries/sickle_darwin_arm64 -> build/bdist.linux-armv7l/wheel/./abutils/binaries 2026-04-14T17:50:19,414 copying build/lib/abutils/binaries/muscle_darwin_amd64 -> build/bdist.linux-armv7l/wheel/./abutils/binaries 2026-04-14T17:50:19,433 copying build/lib/abutils/binaries/fasttree_darwin_arm64 -> build/bdist.linux-armv7l/wheel/./abutils/binaries 2026-04-14T17:50:19,442 copying build/lib/abutils/binaries/mmseqs_darwin_amd64 -> build/bdist.linux-armv7l/wheel/./abutils/binaries 2026-04-14T17:50:19,550 copying build/lib/abutils/binaries/vsearch_darwin_amd64 -> build/bdist.linux-armv7l/wheel/./abutils/binaries 2026-04-14T17:50:19,560 copying build/lib/abutils/binaries/muscle3_darwin -> build/bdist.linux-armv7l/wheel/./abutils/binaries 2026-04-14T17:50:19,569 creating build/bdist.linux-armv7l/wheel/abutils/plots 2026-04-14T17:50:19,571 copying build/lib/abutils/plots/ring.py -> build/bdist.linux-armv7l/wheel/./abutils/plots 2026-04-14T17:50:19,573 copying build/lib/abutils/plots/ridge.py -> build/bdist.linux-armv7l/wheel/./abutils/plots 2026-04-14T17:50:19,576 copying build/lib/abutils/plots/__init__.py -> build/bdist.linux-armv7l/wheel/./abutils/plots 2026-04-14T17:50:19,577 copying build/lib/abutils/plots/base.py -> build/bdist.linux-armv7l/wheel/./abutils/plots 2026-04-14T17:50:19,579 copying build/lib/abutils/plots/donut.py -> build/bdist.linux-armv7l/wheel/./abutils/plots 2026-04-14T17:50:19,581 copying build/lib/abutils/plots/data.py -> build/bdist.linux-armv7l/wheel/./abutils/plots 2026-04-14T17:50:19,584 copying build/lib/abutils/plots/lineage.py -> build/bdist.linux-armv7l/wheel/./abutils/plots 2026-04-14T17:50:19,587 creating build/bdist.linux-armv7l/wheel/abutils/plots/mixins 2026-04-14T17:50:19,588 copying build/lib/abutils/plots/mixins/__init__.py -> build/bdist.linux-armv7l/wheel/./abutils/plots/mixins 2026-04-14T17:50:19,589 copying build/lib/abutils/plots/mixins/hue.py -> build/bdist.linux-armv7l/wheel/./abutils/plots/mixins 2026-04-14T17:50:19,591 copying build/lib/abutils/plots/kde.py -> build/bdist.linux-armv7l/wheel/./abutils/plots 2026-04-14T17:50:19,594 copying build/lib/abutils/plots/scatter.py -> build/bdist.linux-armv7l/wheel/./abutils/plots 2026-04-14T17:50:19,597 copying build/lib/abutils/plots/summary.py -> build/bdist.linux-armv7l/wheel/./abutils/plots 2026-04-14T17:50:19,599 copying build/lib/abutils/plots/heatmap.py -> build/bdist.linux-armv7l/wheel/./abutils/plots 2026-04-14T17:50:19,601 copying build/lib/abutils/plots/bar.py -> build/bdist.linux-armv7l/wheel/./abutils/plots 2026-04-14T17:50:19,604 creating build/bdist.linux-armv7l/wheel/abutils/plots/models 2026-04-14T17:50:19,605 copying build/lib/abutils/plots/models/__init__.py -> build/bdist.linux-armv7l/wheel/./abutils/plots/models 2026-04-14T17:50:19,607 copying build/lib/abutils/plots/models/data.py -> build/bdist.linux-armv7l/wheel/./abutils/plots/models 2026-04-14T17:50:19,610 copying build/lib/abutils/plots/utils.py -> build/bdist.linux-armv7l/wheel/./abutils/plots 2026-04-14T17:50:19,612 running install_egg_info 2026-04-14T17:50:19,646 Copying abutils.egg-info to build/bdist.linux-armv7l/wheel/./abutils-0.6.0-py3.11.egg-info 2026-04-14T17:50:19,656 running install_scripts 2026-04-14T17:50:19,667 creating build/bdist.linux-armv7l/wheel/abutils-0.6.0.dist-info/WHEEL 2026-04-14T17:50:19,669 creating '/tmp/pip-wheel-mp2blbdc/abutils-0.6.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-04-14T17:50:19,672 adding 'abutils/__init__.py' 2026-04-14T17:50:19,673 adding 'abutils/bin.py' 2026-04-14T17:50:19,675 adding 'abutils/cl.py' 2026-04-14T17:50:19,679 adding 'abutils/io.py' 2026-04-14T17:50:19,681 adding 'abutils/log.py' 2026-04-14T17:50:19,682 adding 'abutils/pl.py' 2026-04-14T17:50:19,683 adding 'abutils/pp.py' 2026-04-14T17:50:19,685 adding 'abutils/tl.py' 2026-04-14T17:50:19,686 adding 'abutils/version.py' 2026-04-14T17:50:19,713 adding 'abutils/binaries/cdhit_darwin_amd64' 2026-04-14T17:50:19,741 adding 'abutils/binaries/cdhit_darwin_arm64' 2026-04-14T17:50:19,765 adding 'abutils/binaries/cdhit_linux_amd64' 2026-04-14T17:50:19,876 adding 'abutils/binaries/fastp_darwin' 2026-04-14T17:50:21,549 adding 'abutils/binaries/fastp_linux' 2026-04-14T17:50:21,656 adding 'abutils/binaries/fasttree_darwin_amd64' 2026-04-14T17:50:21,716 adding 'abutils/binaries/fasttree_darwin_arm64' 2026-04-14T17:50:21,787 adding 'abutils/binaries/fasttree_linux_amd64' 2026-04-14T17:50:21,818 adding 'abutils/binaries/minimap2_darwin_arm64' 2026-04-14T17:50:21,995 adding 'abutils/binaries/minimap2_linux_amd64' 2026-04-14T17:50:23,108 adding 'abutils/binaries/mmseqs_darwin_amd64' 2026-04-14T17:50:32,833 adding 'abutils/binaries/mmseqs_darwin_arm64' 2026-04-14T17:50:46,477 adding 'abutils/binaries/mmseqs_linux_amd64' 2026-04-14T17:50:47,018 adding 'abutils/binaries/muscle3_darwin' 2026-04-14T17:50:47,082 adding 'abutils/binaries/muscle3_linux' 2026-04-14T17:50:47,261 adding 'abutils/binaries/muscle_darwin_amd64' 2026-04-14T17:50:47,417 adding 'abutils/binaries/muscle_darwin_arm64' 2026-04-14T17:50:47,928 adding 'abutils/binaries/muscle_linux_amd64' 2026-04-14T17:50:47,950 adding 'abutils/binaries/sickle_darwin_arm64' 2026-04-14T17:50:47,956 adding 'abutils/binaries/sickle_linux_amd64' 2026-04-14T17:50:48,032 adding 'abutils/binaries/vsearch_darwin_amd64' 2026-04-14T17:50:48,102 adding 'abutils/binaries/vsearch_darwin_arm64' 2026-04-14T17:50:48,418 adding 'abutils/binaries/vsearch_linux_amd64' 2026-04-14T17:50:48,433 adding 'abutils/binaries/mafft_darwin/mafft.bat' 2026-04-14T17:50:48,464 adding 'abutils/binaries/mafft_darwin/mafftdir/bin/mafft' 2026-04-14T17:50:48,866 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/addsingle' 2026-04-14T17:50:49,022 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/contrafoldwrap' 2026-04-14T17:50:49,071 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/countlen' 2026-04-14T17:50:51,382 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/dash_client' 2026-04-14T17:50:51,773 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/disttbfast' 2026-04-14T17:50:51,936 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/dndblast' 2026-04-14T17:50:52,094 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/dndfast7' 2026-04-14T17:50:52,246 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/dndpre' 2026-04-14T17:50:52,561 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/dvtditr' 2026-04-14T17:50:52,638 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/f2cl' 2026-04-14T17:50:52,765 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/filter' 2026-04-14T17:50:53,046 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/getlag' 2026-04-14T17:50:53,061 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/hex2maffttext' 2026-04-14T17:50:53,213 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/mafft-distance' 2026-04-14T17:50:53,220 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/mafft-homologs.1' 2026-04-14T17:50:53,496 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/mafft-profile' 2026-04-14T17:50:53,522 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/mafft.1' 2026-04-14T17:50:53,582 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/mafftash_premafft.pl' 2026-04-14T17:50:53,595 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/maffttext2hex' 2026-04-14T17:50:53,994 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/makedirectionlist' 2026-04-14T17:50:54,150 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/mccaskillwrap' 2026-04-14T17:50:54,316 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/multi2hat3s' 2026-04-14T17:50:54,630 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/nodepair' 2026-04-14T17:50:54,925 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/pairash' 2026-04-14T17:50:55,229 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/pairlocalalign' 2026-04-14T17:50:55,363 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/regtable2seq' 2026-04-14T17:50:55,492 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/replaceu' 2026-04-14T17:50:55,621 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/restoreu' 2026-04-14T17:50:55,769 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/score' 2026-04-14T17:50:55,777 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/seekquencer_premafft.pl' 2026-04-14T17:50:55,821 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/seq2regtable' 2026-04-14T17:50:56,101 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/setcore' 2026-04-14T17:50:56,234 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/setdirection' 2026-04-14T17:50:56,392 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/sextet5' 2026-04-14T17:50:56,687 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/splittbfast' 2026-04-14T17:50:57,024 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/tbfast' 2026-04-14T17:50:57,040 adding 'abutils/binaries/mafft_darwin/mafftdir/libexec/version' 2026-04-14T17:50:57,044 adding 'abutils/binaries/mafft_linux/mafft.bat' 2026-04-14T17:50:57,055 adding 'abutils/binaries/mafft_linux/mafftdir/bin/mafft' 2026-04-14T17:50:57,312 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/addsingle' 2026-04-14T17:50:57,493 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/contrafoldwrap' 2026-04-14T17:50:57,617 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/countlen' 2026-04-14T17:50:57,626 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/dash_alignments' 2026-04-14T17:50:58,415 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/dash_client' 2026-04-14T17:50:58,444 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/dash_sequences.fa' 2026-04-14T17:50:58,703 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/disttbfast' 2026-04-14T17:50:58,886 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/dndblast' 2026-04-14T17:50:59,067 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/dndfast7' 2026-04-14T17:50:59,247 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/dndpre' 2026-04-14T17:50:59,501 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/dvtditr' 2026-04-14T17:50:59,642 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/f2cl' 2026-04-14T17:50:59,809 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/filter' 2026-04-14T17:51:00,048 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/getlag' 2026-04-14T17:51:00,056 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/hat3' 2026-04-14T17:51:00,158 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/hex2maffttext' 2026-04-14T17:51:00,338 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/mafft-distance' 2026-04-14T17:51:00,345 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/mafft-homologs.1' 2026-04-14T17:51:00,579 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/mafft-profile' 2026-04-14T17:51:00,589 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/mafft.1' 2026-04-14T17:51:00,591 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/mafftash_premafft.pl' 2026-04-14T17:51:00,693 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/maffttext2hex' 2026-04-14T17:51:00,935 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/makedirectionlist' 2026-04-14T17:51:01,116 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/mccaskillwrap' 2026-04-14T17:51:01,308 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/multi2hat3s' 2026-04-14T17:51:01,560 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/nodepair' 2026-04-14T17:51:01,803 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/pairash' 2026-04-14T17:51:02,051 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/pairlocalalign' 2026-04-14T17:51:02,222 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/regtable2seq' 2026-04-14T17:51:02,392 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/replaceu' 2026-04-14T17:51:02,562 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/restoreu' 2026-04-14T17:51:02,741 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/score' 2026-04-14T17:51:02,749 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/seekquencer_premafft.pl' 2026-04-14T17:51:02,867 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/seq2regtable' 2026-04-14T17:51:03,104 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/setcore' 2026-04-14T17:51:03,275 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/setdirection' 2026-04-14T17:51:03,453 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/sextet5' 2026-04-14T17:51:03,698 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/splittbfast' 2026-04-14T17:51:03,960 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/tbfast' 2026-04-14T17:51:04,074 adding 'abutils/binaries/mafft_linux/mafftdir/libexec/version' 2026-04-14T17:51:04,077 adding 'abutils/core/__init__.py' 2026-04-14T17:51:04,084 adding 'abutils/core/lineage.py' 2026-04-14T17:51:04,090 adding 'abutils/core/pair.py' 2026-04-14T17:51:04,096 adding 'abutils/core/sequence.py' 2026-04-14T17:51:04,099 adding 'abutils/plots/__init__.py' 2026-04-14T17:51:04,102 adding 'abutils/plots/bar.py' 2026-04-14T17:51:04,104 adding 'abutils/plots/base.py' 2026-04-14T17:51:04,106 adding 'abutils/plots/data.py' 2026-04-14T17:51:04,109 adding 'abutils/plots/donut.py' 2026-04-14T17:51:04,112 adding 'abutils/plots/heatmap.py' 2026-04-14T17:51:04,118 adding 'abutils/plots/kde.py' 2026-04-14T17:51:04,121 adding 'abutils/plots/lineage.py' 2026-04-14T17:51:04,123 adding 'abutils/plots/ridge.py' 2026-04-14T17:51:04,125 adding 'abutils/plots/ring.py' 2026-04-14T17:51:04,129 adding 'abutils/plots/scatter.py' 2026-04-14T17:51:04,131 adding 'abutils/plots/summary.py' 2026-04-14T17:51:04,132 adding 'abutils/plots/utils.py' 2026-04-14T17:51:04,134 adding 'abutils/plots/mixins/__init__.py' 2026-04-14T17:51:04,136 adding 'abutils/plots/mixins/hue.py' 2026-04-14T17:51:04,137 adding 'abutils/plots/models/__init__.py' 2026-04-14T17:51:04,141 adding 'abutils/plots/models/data.py' 2026-04-14T17:51:04,143 adding 'abutils/preprocess/__init__.py' 2026-04-14T17:51:04,146 adding 'abutils/preprocess/preprocess.py' 2026-04-14T17:51:04,148 adding 'abutils/tests/__init__.py' 2026-04-14T17:51:04,151 adding 'abutils/tests/test_alignment.py' 2026-04-14T17:51:04,152 adding 'abutils/tests/test_clonify.py' 2026-04-14T17:51:04,154 adding 'abutils/tests/test_cloning.py' 2026-04-14T17:51:04,156 adding 'abutils/tests/test_cluster.py' 2026-04-14T17:51:04,158 adding 'abutils/tests/test_color.py' 2026-04-14T17:51:04,160 adding 'abutils/tests/test_io.py' 2026-04-14T17:51:04,162 adding 'abutils/tests/test_lineage.py' 2026-04-14T17:51:04,164 adding 'abutils/tests/test_pair.py' 2026-04-14T17:51:04,166 adding 'abutils/tests/test_phylo.py' 2026-04-14T17:51:04,168 adding 'abutils/tests/test_plots.py' 2026-04-14T17:51:04,170 adding 'abutils/tests/test_preprocessing.py' 2026-04-14T17:51:04,172 adding 'abutils/tests/test_sequence.py' 2026-04-14T17:51:04,174 adding 'abutils/tests/test_similarity.py' 2026-04-14T17:51:04,176 adding 'abutils/tests/test_utilities.py' 2026-04-14T17:51:04,178 adding 'abutils/tools/__init__.py' 2026-04-14T17:51:04,186 adding 'abutils/tools/alignment.py' 2026-04-14T17:51:04,188 adding 'abutils/tools/anarci.py' 2026-04-14T17:51:04,192 adding 'abutils/tools/clonify.py' 2026-04-14T17:51:04,195 adding 'abutils/tools/cloning.py' 2026-04-14T17:51:04,200 adding 'abutils/tools/cluster.py' 2026-04-14T17:51:04,202 adding 'abutils/tools/log.py' 2026-04-14T17:51:04,207 adding 'abutils/tools/phylo.py' 2026-04-14T17:51:04,212 adding 'abutils/tools/preprocessing.py' 2026-04-14T17:51:04,214 adding 'abutils/tools/search.py' 2026-04-14T17:51:04,217 adding 'abutils/tools/similarity.py' 2026-04-14T17:51:04,220 adding 'abutils/utils/__init__.py' 2026-04-14T17:51:04,228 adding 'abutils/utils/alignment.py' 2026-04-14T17:51:04,230 adding 'abutils/utils/circos.py' 2026-04-14T17:51:04,231 adding 'abutils/utils/click.py' 2026-04-14T17:51:04,236 adding 'abutils/utils/cluster.py' 2026-04-14T17:51:04,238 adding 'abutils/utils/codons.py' 2026-04-14T17:51:04,240 adding 'abutils/utils/color.py' 2026-04-14T17:51:04,242 adding 'abutils/utils/convert.py' 2026-04-14T17:51:04,244 adding 'abutils/utils/database.py' 2026-04-14T17:51:04,246 adding 'abutils/utils/decorators.py' 2026-04-14T17:51:04,248 adding 'abutils/utils/germlines.py' 2026-04-14T17:51:04,250 adding 'abutils/utils/jobs.py' 2026-04-14T17:51:04,252 adding 'abutils/utils/log.py' 2026-04-14T17:51:04,254 adding 'abutils/utils/mongodb.py' 2026-04-14T17:51:04,256 adding 'abutils/utils/path.py' 2026-04-14T17:51:04,261 adding 'abutils/utils/phylogeny.py' 2026-04-14T17:51:04,263 adding 'abutils/utils/progbar.py' 2026-04-14T17:51:04,265 adding 'abutils/utils/s3.py' 2026-04-14T17:51:04,267 adding 'abutils/utils/seqio.py' 2026-04-14T17:51:04,269 adding 'abutils/utils/ssh_tunnel.py' 2026-04-14T17:51:04,271 adding 'abutils/utils/utilities.py' 2026-04-14T17:51:04,273 adding 'abutils/utils/matrices/blosum62' 2026-04-14T17:51:04,274 adding 'abutils/utils/matrices/match1mismatch0' 2026-04-14T17:51:04,276 adding 'abutils/utils/matrices/match3mismatch2' 2026-04-14T17:51:04,279 adding 'abutils-0.6.0.dist-info/licenses/LICENSE' 2026-04-14T17:51:04,281 adding 'abutils-0.6.0.dist-info/METADATA' 2026-04-14T17:51:04,282 adding 'abutils-0.6.0.dist-info/WHEEL' 2026-04-14T17:51:04,283 adding 'abutils-0.6.0.dist-info/top_level.txt' 2026-04-14T17:51:04,287 adding 'abutils-0.6.0.dist-info/RECORD' 2026-04-14T17:51:04,524 removing build/bdist.linux-armv7l/wheel 2026-04-14T17:51:04,731 Building wheel for abutils (setup.py): finished with status 'done' 2026-04-14T17:51:06,577 Created wheel for abutils: filename=abutils-0.6.0-py3-none-any.whl size=86662562 sha256=a1dd6e260e5f35071bc8a774f5f972bd92b5a5b9edb32b0ec9689e5cfa0d5bb4 2026-04-14T17:51:06,579 Stored in directory: /tmp/pip-ephem-wheel-cache-3ve5g6pp/wheels/df/4d/67/fa47dee032f1e9a6af2818a9ea9e7003e637bf7dd76d3af57a 2026-04-14T17:51:06,623 Successfully built abutils 2026-04-14T17:51:08,623 Removed build tracker: '/tmp/pip-build-tracker-savxqpzo'