2026-04-14T22:11:13,649 Created temporary directory: /tmp/pip-ephem-wheel-cache-t14mrluf 2026-04-14T22:11:13,651 Created temporary directory: /tmp/pip-build-tracker-g8x88wxk 2026-04-14T22:11:13,652 Initialized build tracking at /tmp/pip-build-tracker-g8x88wxk 2026-04-14T22:11:13,652 Created build tracker: /tmp/pip-build-tracker-g8x88wxk 2026-04-14T22:11:13,653 Entered build tracker: /tmp/pip-build-tracker-g8x88wxk 2026-04-14T22:11:13,654 Created temporary directory: /tmp/pip-wheel-vigmjk0_ 2026-04-14T22:11:13,656 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-14T22:11:13,659 Created temporary directory: /tmp/pip-ephem-wheel-cache-vz8lmf0b 2026-04-14T22:11:13,680 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-14T22:11:13,684 2 location(s) to search for versions of pirlygenes: 2026-04-14T22:11:13,684 * https://pypi.org/simple/pirlygenes/ 2026-04-14T22:11:13,684 * https://www.piwheels.org/simple/pirlygenes/ 2026-04-14T22:11:13,685 Fetching project page and analyzing links: https://pypi.org/simple/pirlygenes/ 2026-04-14T22:11:13,685 Getting page https://pypi.org/simple/pirlygenes/ 2026-04-14T22:11:13,687 Found index url https://pypi.org/simple 2026-04-14T22:11:13,912 Fetched page https://pypi.org/simple/pirlygenes/ as application/vnd.pypi.simple.v1+json 2026-04-14T22:11:13,935 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/2e/66/a994711ece0c32dc4037b2c20acb069375f8eb2c80bdcca3a9efa47fdaee/pirlygenes-1.7.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:13,937 Found link https://files.pythonhosted.org/packages/17/fe/bcdacc3535105e4aed789ffd67937b0a725f5eaf16e19e2d70d7d9994985/pirlygenes-1.7.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 1.7.0 2026-04-14T22:11:13,937 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/59/b0/3e2df98a4c7e570e430d5a43b78c4325669dc94f670df919535730ad97e4/pirlygenes-1.8.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:13,938 Found link https://files.pythonhosted.org/packages/4b/7c/57808dd823cb43e0775fef54e28607a61d6e34549ef6c21f02e85567e13a/pirlygenes-1.8.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 1.8.0 2026-04-14T22:11:13,939 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/9a/8d/f18f1d145c3cc415d28137493c5cb8e758516d9ac9633fc74cb4f86a318a/pirlygenes-1.8.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:13,940 Found link https://files.pythonhosted.org/packages/61/0c/c3f0aff27c3758ba3f3ee1f4a63a05238e02043251af230032d9ba555624/pirlygenes-1.8.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 1.8.1 2026-04-14T22:11:13,941 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/24/35/2c1111a823202625bf5719038d745faaa60ed3613bc790db7a365d0d9e91/pirlygenes-1.9.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:13,942 Found link https://files.pythonhosted.org/packages/00/21/33762d0e1497cb8f52920f8804591991b077145275a9bb472d54cb34bd3b/pirlygenes-1.9.0.tar.gz (from 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https://files.pythonhosted.org/packages/f0/57/519f98c3e3ce7414973c34a35b56e0123e63c2397c1c28a40f52096110e8/pirlygenes-2.0.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.0.1 2026-04-14T22:11:13,946 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/b2/a5/eb85bc710dc92ed90930681df0d0727ba7c8adce5f597218b60c8e749abb/pirlygenes-2.1.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:13,947 Found link https://files.pythonhosted.org/packages/ac/1c/535ab059a16f501c104975a9afdbe26292625c5f6b4565dfaff29827dae5/pirlygenes-2.1.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.1.0 2026-04-14T22:11:13,948 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/31/67/9fb299b51b80ea11807d6cca24343e9b5bcd4f343f5590f443f4ab27d256/pirlygenes-2.2.0-py3-none-any.whl (from 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2026-04-14T22:11:13,955 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/8a/44/da6370091aea72fec9b67e936a15ae4ebdf9dff908aa9d19047e94159d04/pirlygenes-2.3.2-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:13,955 Found link https://files.pythonhosted.org/packages/10/a9/907cc4508814906e8c990c01f4f5a8e876d8494a06e48b3231bc8cb0fc76/pirlygenes-2.3.2.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.3.2 2026-04-14T22:11:13,956 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/3f/b6/830da154d45d5ac46ae4fec7615e8cad6fdc54a8977e3ad5d5b719b3e381/pirlygenes-2.4.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:13,957 Found link https://files.pythonhosted.org/packages/72/cb/85849617feaf50f329a0545583033d697e353ad48f34484f70c94a38a7fe/pirlygenes-2.4.0.tar.gz (from 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https://files.pythonhosted.org/packages/6a/f7/cd7bb912ebd9a8fd5678378444dd4cbf57614f841b83aca8d8ae68221512/pirlygenes-2.4.2.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.4.2 2026-04-14T22:11:13,961 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/06/ba/c6259e141db6ae01ab36e9b24878291184fa9551fbba7d8cc122d162370a/pirlygenes-2.5.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:13,962 Found link https://files.pythonhosted.org/packages/2a/02/a683073293d6e1567e993c5ddeb5b4f20cecf9c143b7c34ca69c6b0fe0bf/pirlygenes-2.5.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.5.0 2026-04-14T22:11:13,963 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/3b/3a/d237a82d8794a11a26a1ef9bfff88a11e9bdf47b1f6505e328954ced2b0e/pirlygenes-2.5.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:13,964 Found link https://files.pythonhosted.org/packages/b5/e2/879e92ab87381e4ef635263624155d4f2331588bc05aea8a223225f108f7/pirlygenes-2.5.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.5.1 2026-04-14T22:11:13,964 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/a4/c0/3c64fac1cdedad5802d2905b10f836c5a5d805a9dc0d0beeda285a065df3/pirlygenes-2.6.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:13,965 Found link https://files.pythonhosted.org/packages/2a/df/7ffd654f123a21c608210fe4ed416bda8e56ceb36743d27a8fa4b9eace1e/pirlygenes-2.6.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.6.0 2026-04-14T22:11:13,966 Skipping link: No binaries permitted for pirlygenes: 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2026-04-14T22:11:13,970 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/57/7c/f087e5968735238e4782164c5af185405be0eec060121b61c187f5c55429/pirlygenes-2.7.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:13,971 Found link https://files.pythonhosted.org/packages/0a/9f/6f1a18016493c71ae63b236e4e5186535b85f15188b969cfded686dec47a/pirlygenes-2.7.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.7.1 2026-04-14T22:11:13,971 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/34/d6/ffd2ae0d7511cb22ee2b857520a19acb21ff834f8d8baaa2e70c4c542d7f/pirlygenes-2.8.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:13,972 Found link https://files.pythonhosted.org/packages/33/84/8cd197f6dc1169477bc562d9d667a30ccb0488747c3fe5682e91dea7e16c/pirlygenes-2.8.0.tar.gz (from 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https://files.pythonhosted.org/packages/70/9e/1157f5be862f2934c4601e58c170f604ec09a41f39353e19db0cfabd3747/pirlygenes-2.9.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.9.0 2026-04-14T22:11:13,976 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/6b/80/dfbdeb2a06952345e1a272f55eea07270f41c478be600056c0df5b0271d6/pirlygenes-2.10.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:13,977 Found link https://files.pythonhosted.org/packages/16/66/a9669f568842a86ec7b40ca9405cdefdafbd5835aebefa7f042f28db4735/pirlygenes-2.10.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.10.0 2026-04-14T22:11:13,978 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/fd/49/2f105db973d6a1c5529814f286d8e1a30d25f4ad3186069ad88a2b12de73/pirlygenes-2.11.0-py3-none-any.whl (from 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https://files.pythonhosted.org/packages/67/b0/e677f7b6539ab55102ac0e5c18865a79005426aec1b80cb9459654846d67/pirlygenes-3.26.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 3.26.0 2026-04-14T22:11:14,035 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/62/64/1a173931dd65b7c939fe8958dc8d46f762e67642d8e9985dafb0768695fb/pirlygenes-3.26.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:14,035 Found link https://files.pythonhosted.org/packages/34/42/bbc226d9de4b5c60e8b82c457178a69c9bc5b955e7b3544a8868b81ff987/pirlygenes-3.26.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 3.26.1 2026-04-14T22:11:14,036 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/7c/9c/c9f431181ffc9f4f47eac9845f1cb6b07954bbc0ae001b2e5207ce24b596/pirlygenes-3.26.2-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:14,037 Found link https://files.pythonhosted.org/packages/28/21/14e6e8df2a6cde7ffa7d46a6507d48f0d229f60e880a945ba21c483cb60b/pirlygenes-3.26.2.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 3.26.2 2026-04-14T22:11:14,037 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/c6/c0/c84347f9a9f3e386d2808c1f13784b43dd64ac84a8b4b13647a001ff9008/pirlygenes-4.0.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:14,039 Found link https://files.pythonhosted.org/packages/07/15/bda494c30efb712accc9f2e98b233f93d4dde1a6bd16a75c45005f8bd52c/pirlygenes-4.0.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 4.0.0 2026-04-14T22:11:14,039 Skipping link: No binaries permitted for pirlygenes: 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2026-04-14T22:11:14,043 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/a4/64/5e11a3a03ee52dce5d8482f1057e88bab0dd10ba937b9b52eeeab7e6e12c/pirlygenes-4.3.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:14,044 Found link https://files.pythonhosted.org/packages/4e/80/fe4ad52761b14e30a056a7aabffe97e3209d1ce6c0b6006f0468ac722958/pirlygenes-4.3.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 4.3.0 2026-04-14T22:11:14,045 Fetching project page and analyzing links: https://www.piwheels.org/simple/pirlygenes/ 2026-04-14T22:11:14,045 Getting page https://www.piwheels.org/simple/pirlygenes/ 2026-04-14T22:11:14,047 Found index url https://www.piwheels.org/simple 2026-04-14T22:11:14,231 Fetched page https://www.piwheels.org/simple/pirlygenes/ as text/html 2026-04-14T22:11:14,250 Skipping link: No binaries permitted for pirlygenes: 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https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.14.0-py3-none-any.whl#sha256=057ce48582bffd44e37684068b1e64e750349609703d93d80efa875cb9b00d12 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:14,273 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.13.0-py3-none-any.whl#sha256=e13770f973755e3b8db3fc2f70e2d674dd6055486bb4c242b0663dc91da8137d (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:14,273 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.12.0-py3-none-any.whl#sha256=4186f04e1d7c70e23fa5546b20cdac46e49b68e86fc5bda42db5151921548f5d (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:14,274 Skipping link: No binaries permitted for pirlygenes: 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https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.8.1-py3-none-any.whl#sha256=1b346af13b190e47650615724130b80dc1044b25269d3603013a7436e13f4ab6 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:14,276 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.8.0-py3-none-any.whl#sha256=9674c64aec5ff095f4fd209c995e33c4427c4029d9786a79177b3d1b837a6faf (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:14,277 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.7.1-py3-none-any.whl#sha256=711ccbff08ff3332a4caf4b1867ed739f0a4f59cd39dcdf7b2d2d46bb7bb12cb (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:14,277 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.7.0-py3-none-any.whl#sha256=c9b45dd5c01a5c24f9323fa0fbc8c32b9e70e49d7898e965ecd199ae56a992de (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:14,278 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.6.1-py3-none-any.whl#sha256=7f45bca601f637ca0bfa8466169c84685b60a3dd5fcb8d07132cd1fa4159f3a8 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:14,279 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.6.0-py3-none-any.whl#sha256=99581a72b34217d895a9e9377aebff39d3cccb34eea0c01f3056f29d8ea69479 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:14,279 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.5.1-py3-none-any.whl#sha256=b097b3f8b48f33c23fc888588f0644e92b3b973d37536ae992576cff3d2c550a (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:14,280 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.5.0-py3-none-any.whl#sha256=7ed846a4e0950617d0103bb8a51b54f0f00bfa982caa83c9013067f52251e39e (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:14,280 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.4.2-py3-none-any.whl#sha256=25793e34918b22dc36562123fdf4e753df72f9cc712aa69c1f151b96a09ab68a (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:14,281 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.4.1-py3-none-any.whl#sha256=a8a045cb5d44a0dc2d8d5b5d15f847d44c7fcbf4e65dfb65be5127275d30604c (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:14,282 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.4.0-py3-none-any.whl#sha256=06c550405b77c1a7f42776114270baca28b88844cd57d5a0f5e0ed554ee215dc (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:14,282 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.3.2-py3-none-any.whl#sha256=dc55fdcf24cb20e6e920706a735f11dc23aaaf50051f4a01414854d27c76e89f (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:14,283 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.3.1-py3-none-any.whl#sha256=c90c60420627308e8f538bbaa1306ced6e7699e82818b6016119c5b5661936b0 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:14,283 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.3.0-py3-none-any.whl#sha256=88bf981b5ba9b7fa0a46232499d049d3faafaf76e258e3d09e1b65ba9f97b22d (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:14,284 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.2.1-py3-none-any.whl#sha256=5327c129eaf178c76a60b5257dfe32546f0c09dd8881ddb296f458e11934ccf7 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:14,284 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.2.0-py3-none-any.whl#sha256=09718fb06f1ce838406a07641c7df1df1ff56ad9bcca5e70f0dabeabf18d9eb6 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:14,285 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.1.0-py3-none-any.whl#sha256=6e0978a40a4b6a16e6e44012574ac0838b0abf01a40770a2b4c8e7db2aa583a6 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:14,285 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.0.1-py3-none-any.whl#sha256=0956b5fd3f21d43dea90b38bbc06628b327c49504aa0fc53d3d81d55208c6f5f (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:14,286 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.0.0-py3-none-any.whl#sha256=de738501d014cdb6760b96e01afa7d18cb8dac3d863d433e9ce8fce0172641f5 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:14,287 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-1.9.0-py3-none-any.whl#sha256=3be90370a11cc9b33de80e02b84f99700133addc5994e35bcb8b80b76f09f8ae (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:14,287 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-1.8.1-py3-none-any.whl#sha256=35f8427ceac3714bb6339609b7f3602ea81ea8b5642c4e760931e9a28263a28b (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:14,288 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-1.8.0-py3-none-any.whl#sha256=202a232caf63d7ad6c6d202e8d8c6c3f52bb57aa7bd124b14be89597a4637f02 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:14,288 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-1.7.0-py3-none-any.whl#sha256=01a45cdf8948ae1d8a8034363ecd9357088d1df4c99ffb9370f8d68432ff4fa7 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-14T22:11:14,289 Skipping link: not a file: https://www.piwheels.org/simple/pirlygenes/ 2026-04-14T22:11:14,290 Skipping link: not a file: https://pypi.org/simple/pirlygenes/ 2026-04-14T22:11:14,319 Given no hashes to check 1 links for project 'pirlygenes': discarding no candidates 2026-04-14T22:11:14,339 Collecting pirlygenes==4.3.0 2026-04-14T22:11:14,341 Created temporary directory: /tmp/pip-unpack-43h8w4h1 2026-04-14T22:11:14,576 Downloading pirlygenes-4.3.0.tar.gz (7.4 MB) 2026-04-14T22:11:16,661 Added pirlygenes==4.3.0 from https://files.pythonhosted.org/packages/4e/80/fe4ad52761b14e30a056a7aabffe97e3209d1ce6c0b6006f0468ac722958/pirlygenes-4.3.0.tar.gz to build tracker '/tmp/pip-build-tracker-g8x88wxk' 2026-04-14T22:11:16,670 Created temporary directory: /tmp/pip-build-env-hxxhstbl 2026-04-14T22:11:16,674 Installing build dependencies: started 2026-04-14T22:11:16,675 Running command pip subprocess to install build dependencies 2026-04-14T22:11:17,815 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-04-14T22:11:18,269 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-14T22:11:18,292 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-14T22:11:20,076 Collecting setuptools>=60 2026-04-14T22:11:20,154 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-04-14T22:11:20,543 Collecting setuptools-scm>=8.0 2026-04-14T22:11:20,559 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl (21 kB) 2026-04-14T22:11:20,646 Collecting vcs-versioning>=1.0.0.dev0 2026-04-14T22:11:20,665 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl (79 kB) 2026-04-14T22:11:20,847 Collecting packaging>=20 2026-04-14T22:11:20,853 Using cached packaging-26.1-py3-none-any.whl (95 kB) 2026-04-14T22:11:23,878 Installing collected packages: setuptools, packaging, vcs-versioning, setuptools-scm 2026-04-14T22:11:27,822 Creating /tmp/pip-build-env-hxxhstbl/overlay/local/bin 2026-04-14T22:11:27,825 changing mode of /tmp/pip-build-env-hxxhstbl/overlay/local/bin/vcs-versioning to 755 2026-04-14T22:11:27,964 changing mode of /tmp/pip-build-env-hxxhstbl/overlay/local/bin/setuptools-scm to 755 2026-04-14T22:11:27,990 Successfully installed packaging-26.1 setuptools-82.0.1 setuptools-scm-10.0.5 vcs-versioning-1.1.1 2026-04-14T22:11:28,273 Installing build dependencies: finished with status 'done' 2026-04-14T22:11:28,290 Getting requirements to build wheel: started 2026-04-14T22:11:28,291 Running command Getting requirements to build wheel 2026-04-14T22:11:28,976 toml section missing PosixPath('pyproject.toml') does not contain any of the tool sections: ['setuptools_scm', 'vcs-versioning'] 2026-04-14T22:11:29,099 /tmp/pip-build-env-hxxhstbl/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-14T22:11:29,099 !! 2026-04-14T22:11:29,101 ******************************************************************************** 2026-04-14T22:11:29,101 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-14T22:11:29,102 License :: OSI Approved :: Apache Software License 2026-04-14T22:11:29,104 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-14T22:11:29,105 ******************************************************************************** 2026-04-14T22:11:29,106 !! 2026-04-14T22:11:29,106 dist._finalize_license_expression() 2026-04-14T22:11:29,107 /tmp/pip-build-env-hxxhstbl/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-14T22:11:29,107 !! 2026-04-14T22:11:29,108 ******************************************************************************** 2026-04-14T22:11:29,109 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-14T22:11:29,109 License :: OSI Approved :: Apache Software License 2026-04-14T22:11:29,110 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-14T22:11:29,111 ******************************************************************************** 2026-04-14T22:11:29,112 !! 2026-04-14T22:11:29,112 self._finalize_license_expression() 2026-04-14T22:11:29,114 running egg_info 2026-04-14T22:11:29,123 writing pirlygenes.egg-info/PKG-INFO 2026-04-14T22:11:29,128 writing dependency_links to pirlygenes.egg-info/dependency_links.txt 2026-04-14T22:11:29,129 writing entry points to pirlygenes.egg-info/entry_points.txt 2026-04-14T22:11:29,131 writing requirements to pirlygenes.egg-info/requires.txt 2026-04-14T22:11:29,133 writing top-level names to pirlygenes.egg-info/top_level.txt 2026-04-14T22:11:29,175 /tmp/pip-build-env-hxxhstbl/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-04-14T22:11:29,176 return get_active_overrides().subprocess_timeout 2026-04-14T22:11:29,183 listing git files failed - pretending there aren't any 2026-04-14T22:11:29,193 reading manifest file 'pirlygenes.egg-info/SOURCES.txt' 2026-04-14T22:11:29,204 adding license file 'LICENSE' 2026-04-14T22:11:29,210 writing manifest file 'pirlygenes.egg-info/SOURCES.txt' 2026-04-14T22:11:29,314 Getting requirements to build wheel: finished with status 'done' 2026-04-14T22:11:29,318 Created temporary directory: /tmp/pip-modern-metadata-84vs34z7 2026-04-14T22:11:29,320 Preparing metadata (pyproject.toml): started 2026-04-14T22:11:29,321 Running command Preparing metadata (pyproject.toml) 2026-04-14T22:11:29,951 toml section missing PosixPath('pyproject.toml') does not contain any of the tool sections: ['setuptools_scm', 'vcs-versioning'] 2026-04-14T22:11:30,058 /tmp/pip-build-env-hxxhstbl/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-14T22:11:30,058 !! 2026-04-14T22:11:30,060 ******************************************************************************** 2026-04-14T22:11:30,060 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-14T22:11:30,062 License :: OSI Approved :: Apache Software License 2026-04-14T22:11:30,063 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-14T22:11:30,063 ******************************************************************************** 2026-04-14T22:11:30,065 !! 2026-04-14T22:11:30,065 dist._finalize_license_expression() 2026-04-14T22:11:30,066 /tmp/pip-build-env-hxxhstbl/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-14T22:11:30,067 !! 2026-04-14T22:11:30,068 ******************************************************************************** 2026-04-14T22:11:30,069 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-14T22:11:30,070 License :: OSI Approved :: Apache Software License 2026-04-14T22:11:30,071 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-14T22:11:30,072 ******************************************************************************** 2026-04-14T22:11:30,073 !! 2026-04-14T22:11:30,073 self._finalize_license_expression() 2026-04-14T22:11:30,074 running dist_info 2026-04-14T22:11:30,087 creating /tmp/pip-modern-metadata-84vs34z7/pirlygenes.egg-info 2026-04-14T22:11:30,088 writing /tmp/pip-modern-metadata-84vs34z7/pirlygenes.egg-info/PKG-INFO 2026-04-14T22:11:30,094 writing dependency_links to /tmp/pip-modern-metadata-84vs34z7/pirlygenes.egg-info/dependency_links.txt 2026-04-14T22:11:30,095 writing entry points to /tmp/pip-modern-metadata-84vs34z7/pirlygenes.egg-info/entry_points.txt 2026-04-14T22:11:30,097 writing requirements to /tmp/pip-modern-metadata-84vs34z7/pirlygenes.egg-info/requires.txt 2026-04-14T22:11:30,099 writing top-level names to /tmp/pip-modern-metadata-84vs34z7/pirlygenes.egg-info/top_level.txt 2026-04-14T22:11:30,100 writing manifest file '/tmp/pip-modern-metadata-84vs34z7/pirlygenes.egg-info/SOURCES.txt' 2026-04-14T22:11:30,138 /tmp/pip-build-env-hxxhstbl/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-04-14T22:11:30,139 return get_active_overrides().subprocess_timeout 2026-04-14T22:11:30,145 listing git files failed - pretending there aren't any 2026-04-14T22:11:30,153 reading manifest file '/tmp/pip-modern-metadata-84vs34z7/pirlygenes.egg-info/SOURCES.txt' 2026-04-14T22:11:30,154 adding license file 'LICENSE' 2026-04-14T22:11:30,159 writing manifest file '/tmp/pip-modern-metadata-84vs34z7/pirlygenes.egg-info/SOURCES.txt' 2026-04-14T22:11:30,160 creating '/tmp/pip-modern-metadata-84vs34z7/pirlygenes-4.3.0.dist-info' 2026-04-14T22:11:30,299 Preparing metadata (pyproject.toml): finished with status 'done' 2026-04-14T22:11:30,305 Source in /tmp/pip-wheel-vigmjk0_/pirlygenes_d9d130617cdf48638956ac00a9fee6fa has version 4.3.0, which satisfies requirement pirlygenes==4.3.0 from https://files.pythonhosted.org/packages/4e/80/fe4ad52761b14e30a056a7aabffe97e3209d1ce6c0b6006f0468ac722958/pirlygenes-4.3.0.tar.gz 2026-04-14T22:11:30,306 Removed pirlygenes==4.3.0 from https://files.pythonhosted.org/packages/4e/80/fe4ad52761b14e30a056a7aabffe97e3209d1ce6c0b6006f0468ac722958/pirlygenes-4.3.0.tar.gz from build tracker '/tmp/pip-build-tracker-g8x88wxk' 2026-04-14T22:11:30,314 Created temporary directory: /tmp/pip-unpack-ga9t2irq 2026-04-14T22:11:30,315 Building wheels for collected packages: pirlygenes 2026-04-14T22:11:30,320 Created temporary directory: /tmp/pip-wheel-2nt2s_3r 2026-04-14T22:11:30,320 Destination directory: /tmp/pip-wheel-2nt2s_3r 2026-04-14T22:11:30,323 Building wheel for pirlygenes (pyproject.toml): started 2026-04-14T22:11:30,324 Running command Building wheel for pirlygenes (pyproject.toml) 2026-04-14T22:11:30,908 toml section missing PosixPath('pyproject.toml') does not contain any of the tool sections: ['setuptools_scm', 'vcs-versioning'] 2026-04-14T22:11:31,008 /tmp/pip-build-env-hxxhstbl/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-14T22:11:31,009 !! 2026-04-14T22:11:31,010 ******************************************************************************** 2026-04-14T22:11:31,010 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-14T22:11:31,012 License :: OSI Approved :: Apache Software License 2026-04-14T22:11:31,013 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-14T22:11:31,014 ******************************************************************************** 2026-04-14T22:11:31,015 !! 2026-04-14T22:11:31,016 dist._finalize_license_expression() 2026-04-14T22:11:31,016 /tmp/pip-build-env-hxxhstbl/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-14T22:11:31,017 !! 2026-04-14T22:11:31,018 ******************************************************************************** 2026-04-14T22:11:31,018 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-14T22:11:31,019 License :: OSI Approved :: Apache Software License 2026-04-14T22:11:31,020 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-14T22:11:31,021 ******************************************************************************** 2026-04-14T22:11:31,022 !! 2026-04-14T22:11:31,022 self._finalize_license_expression() 2026-04-14T22:11:31,022 running bdist_wheel 2026-04-14T22:11:31,043 running build 2026-04-14T22:11:31,043 running build_py 2026-04-14T22:11:31,045 creating build/lib/pirlygenes 2026-04-14T22:11:31,048 copying pirlygenes/transcript_to_gene.py -> build/lib/pirlygenes 2026-04-14T22:11:31,050 copying pirlygenes/gene_names.py -> build/lib/pirlygenes 2026-04-14T22:11:31,053 copying pirlygenes/cli.py -> build/lib/pirlygenes 2026-04-14T22:11:31,057 copying pirlygenes/tumor_purity.py -> build/lib/pirlygenes 2026-04-14T22:11:31,060 copying pirlygenes/gene_ids.py -> build/lib/pirlygenes 2026-04-14T22:11:31,063 copying pirlygenes/sample_quality.py -> build/lib/pirlygenes 2026-04-14T22:11:31,066 copying pirlygenes/plot.py -> build/lib/pirlygenes 2026-04-14T22:11:31,071 copying pirlygenes/common.py -> build/lib/pirlygenes 2026-04-14T22:11:31,073 copying pirlygenes/version.py -> build/lib/pirlygenes 2026-04-14T22:11:31,074 copying pirlygenes/gene_sets_cancer.py -> build/lib/pirlygenes 2026-04-14T22:11:31,078 copying pirlygenes/aggregate_gene_expression.py -> build/lib/pirlygenes 2026-04-14T22:11:31,080 copying pirlygenes/__init__.py -> build/lib/pirlygenes 2026-04-14T22:11:31,082 copying pirlygenes/load_dataset.py -> build/lib/pirlygenes 2026-04-14T22:11:31,085 copying pirlygenes/plot_data_helpers.py -> build/lib/pirlygenes 2026-04-14T22:11:31,088 copying pirlygenes/sample_context.py -> build/lib/pirlygenes 2026-04-14T22:11:31,091 copying pirlygenes/therapy_response.py -> build/lib/pirlygenes 2026-04-14T22:11:31,094 copying pirlygenes/load_expression.py -> build/lib/pirlygenes 2026-04-14T22:11:31,097 running egg_info 2026-04-14T22:11:31,112 writing pirlygenes.egg-info/PKG-INFO 2026-04-14T22:11:31,117 writing dependency_links to pirlygenes.egg-info/dependency_links.txt 2026-04-14T22:11:31,119 writing entry points to pirlygenes.egg-info/entry_points.txt 2026-04-14T22:11:31,120 writing requirements to pirlygenes.egg-info/requires.txt 2026-04-14T22:11:31,121 writing top-level names to pirlygenes.egg-info/top_level.txt 2026-04-14T22:11:31,153 /tmp/pip-build-env-hxxhstbl/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-04-14T22:11:31,153 return get_active_overrides().subprocess_timeout 2026-04-14T22:11:31,160 listing git files failed - pretending there aren't any 2026-04-14T22:11:31,168 reading manifest file 'pirlygenes.egg-info/SOURCES.txt' 2026-04-14T22:11:31,175 adding license file 'LICENSE' 2026-04-14T22:11:31,181 writing manifest file 'pirlygenes.egg-info/SOURCES.txt' 2026-04-14T22:11:31,184 /tmp/pip-build-env-hxxhstbl/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'pirlygenes.data' is absent from the `packages` configuration. 2026-04-14T22:11:31,184 !! 2026-04-14T22:11:31,186 ******************************************************************************** 2026-04-14T22:11:31,186 ############################ 2026-04-14T22:11:31,187 # Package would be ignored # 2026-04-14T22:11:31,187 ############################ 2026-04-14T22:11:31,188 Python recognizes 'pirlygenes.data' as an importable package[^1], 2026-04-14T22:11:31,188 but it is absent from setuptools' `packages` configuration. 2026-04-14T22:11:31,189 This leads to an ambiguous overall configuration. If you want to distribute this 2026-04-14T22:11:31,190 package, please make sure that 'pirlygenes.data' is explicitly added 2026-04-14T22:11:31,190 to the `packages` configuration field. 2026-04-14T22:11:31,191 Alternatively, you can also rely on setuptools' discovery methods 2026-04-14T22:11:31,192 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-04-14T22:11:31,192 instead of `find_packages(...)`/`find:`). 2026-04-14T22:11:31,193 You can read more about "package discovery" on setuptools documentation page: 2026-04-14T22:11:31,194 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-04-14T22:11:31,195 If you don't want 'pirlygenes.data' to be distributed and are 2026-04-14T22:11:31,196 already explicitly excluding 'pirlygenes.data' via 2026-04-14T22:11:31,197 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-04-14T22:11:31,197 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-04-14T22:11:31,198 combination with a more fine grained `package-data` configuration. 2026-04-14T22:11:31,200 You can read more about "package data files" on setuptools documentation page: 2026-04-14T22:11:31,201 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-04-14T22:11:31,202 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-04-14T22:11:31,203 even if it does not contain any `.py` files. 2026-04-14T22:11:31,203 On the other hand, currently there is no concept of package data 2026-04-14T22:11:31,204 directory, all directories are treated like packages. 2026-04-14T22:11:31,204 ******************************************************************************** 2026-04-14T22:11:31,205 !! 2026-04-14T22:11:31,206 check.warn(importable) 2026-04-14T22:11:31,207 /tmp/pip-build-env-hxxhstbl/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'pirlygenes.decomposition' is absent from the `packages` configuration. 2026-04-14T22:11:31,207 !! 2026-04-14T22:11:31,208 ******************************************************************************** 2026-04-14T22:11:31,209 ############################ 2026-04-14T22:11:31,209 # Package would be ignored # 2026-04-14T22:11:31,210 ############################ 2026-04-14T22:11:31,210 Python recognizes 'pirlygenes.decomposition' as an importable package[^1], 2026-04-14T22:11:31,211 but it is absent from setuptools' `packages` configuration. 2026-04-14T22:11:31,212 This leads to an ambiguous overall configuration. If you want to distribute this 2026-04-14T22:11:31,213 package, please make sure that 'pirlygenes.decomposition' is explicitly added 2026-04-14T22:11:31,213 to the `packages` configuration field. 2026-04-14T22:11:31,215 Alternatively, you can also rely on setuptools' discovery methods 2026-04-14T22:11:31,215 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-04-14T22:11:31,216 instead of `find_packages(...)`/`find:`). 2026-04-14T22:11:31,217 You can read more about "package discovery" on setuptools documentation page: 2026-04-14T22:11:31,218 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-04-14T22:11:31,219 If you don't want 'pirlygenes.decomposition' to be distributed and are 2026-04-14T22:11:31,220 already explicitly excluding 'pirlygenes.decomposition' via 2026-04-14T22:11:31,220 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-04-14T22:11:31,221 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-04-14T22:11:31,221 combination with a more fine grained `package-data` configuration. 2026-04-14T22:11:31,222 You can read more about "package data files" on setuptools documentation page: 2026-04-14T22:11:31,223 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-04-14T22:11:31,225 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-04-14T22:11:31,225 even if it does not contain any `.py` files. 2026-04-14T22:11:31,226 On the other hand, currently there is no concept of package data 2026-04-14T22:11:31,226 directory, all directories are treated like packages. 2026-04-14T22:11:31,227 ******************************************************************************** 2026-04-14T22:11:31,228 !! 2026-04-14T22:11:31,228 check.warn(importable) 2026-04-14T22:11:31,229 copying pirlygenes/PLAN-1.4.0-radioligand.md -> build/lib/pirlygenes 2026-04-14T22:11:31,229 creating build/lib/pirlygenes/data 2026-04-14T22:11:31,230 copying pirlygenes/data/ADC-approved.csv -> build/lib/pirlygenes/data 2026-04-14T22:11:31,231 copying pirlygenes/data/ADC-trials.csv -> build/lib/pirlygenes/data 2026-04-14T22:11:31,231 copying pirlygenes/data/ADC-withdrawn.csv -> build/lib/pirlygenes/data 2026-04-14T22:11:31,233 copying pirlygenes/data/CAR-T-approved.csv -> build/lib/pirlygenes/data 2026-04-14T22:11:31,233 copying pirlygenes/data/TCR-T-approved.csv -> build/lib/pirlygenes/data 2026-04-14T22:11:31,234 copying pirlygenes/data/TCR-T-trials.csv -> build/lib/pirlygenes/data 2026-04-14T22:11:31,235 copying pirlygenes/data/bispecific-antibodies-approved.csv -> build/lib/pirlygenes/data 2026-04-14T22:11:31,236 copying pirlygenes/data/cancer-driver-genes.csv -> build/lib/pirlygenes/data 2026-04-14T22:11:31,236 copying pirlygenes/data/cancer-driver-variants.csv -> build/lib/pirlygenes/data 2026-04-14T22:11:31,237 copying pirlygenes/data/cancer-family-panels.csv -> build/lib/pirlygenes/data 2026-04-14T22:11:31,238 copying pirlygenes/data/cancer-surfaceome.csv -> build/lib/pirlygenes/data 2026-04-14T22:11:31,238 copying pirlygenes/data/cancer-testis-antigens.csv -> build/lib/pirlygenes/data 2026-04-14T22:11:31,239 copying pirlygenes/data/cancer-type-genes.csv -> build/lib/pirlygenes/data 2026-04-14T22:11:31,240 copying pirlygenes/data/culture-stress-genes.csv -> build/lib/pirlygenes/data 2026-04-14T22:11:31,240 copying pirlygenes/data/degradation-gene-pairs.csv -> build/lib/pirlygenes/data 2026-04-14T22:11:31,242 copying pirlygenes/data/ensembl-id-aliases.csv -> build/lib/pirlygenes/data 2026-04-14T22:11:31,245 copying pirlygenes/data/estimate-signatures.csv -> build/lib/pirlygenes/data 2026-04-14T22:11:31,248 copying pirlygenes/data/gene-sets.csv -> build/lib/pirlygenes/data 2026-04-14T22:11:31,251 copying pirlygenes/data/housekeeping-genes.csv -> build/lib/pirlygenes/data 2026-04-14T22:11:31,253 copying pirlygenes/data/hpa-cell-type-expression.csv -> build/lib/pirlygenes/data 2026-04-14T22:11:31,373 copying pirlygenes/data/lineage-genes.csv -> build/lib/pirlygenes/data 2026-04-14T22:11:31,376 copying pirlygenes/data/mitochondrial-genes.csv -> build/lib/pirlygenes/data 2026-04-14T22:11:31,378 copying pirlygenes/data/multispecific-tcell-engager-trials.csv -> build/lib/pirlygenes/data 2026-04-14T22:11:31,381 copying pirlygenes/data/pan-cancer-expression.csv -> build/lib/pirlygenes/data 2026-04-14T22:11:31,542 copying pirlygenes/data/radioligand-targets.csv -> build/lib/pirlygenes/data 2026-04-14T22:11:31,545 copying pirlygenes/data/surface-proteins.csv -> build/lib/pirlygenes/data 2026-04-14T22:11:31,552 copying pirlygenes/data/therapy-response-signatures.csv -> build/lib/pirlygenes/data 2026-04-14T22:11:31,554 copying pirlygenes/data/tme-markers.csv -> build/lib/pirlygenes/data 2026-04-14T22:11:31,556 creating build/lib/pirlygenes/decomposition 2026-04-14T22:11:31,557 copying pirlygenes/decomposition/__init__.py -> build/lib/pirlygenes/decomposition 2026-04-14T22:11:31,560 copying pirlygenes/decomposition/engine.py -> build/lib/pirlygenes/decomposition 2026-04-14T22:11:31,563 copying pirlygenes/decomposition/panels.py -> build/lib/pirlygenes/decomposition 2026-04-14T22:11:31,566 copying pirlygenes/decomposition/plot.py -> build/lib/pirlygenes/decomposition 2026-04-14T22:11:31,569 copying pirlygenes/decomposition/signature.py -> build/lib/pirlygenes/decomposition 2026-04-14T22:11:31,571 copying pirlygenes/decomposition/templates.py -> build/lib/pirlygenes/decomposition 2026-04-14T22:11:31,589 installing to build/bdist.linux-armv7l/wheel 2026-04-14T22:11:31,590 running install 2026-04-14T22:11:31,613 running install_lib 2026-04-14T22:11:31,621 creating build/bdist.linux-armv7l/wheel 2026-04-14T22:11:31,623 creating build/bdist.linux-armv7l/wheel/pirlygenes 2026-04-14T22:11:31,624 copying build/lib/pirlygenes/transcript_to_gene.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-14T22:11:31,626 copying build/lib/pirlygenes/PLAN-1.4.0-radioligand.md -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-14T22:11:31,628 copying build/lib/pirlygenes/gene_names.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-14T22:11:31,630 copying build/lib/pirlygenes/cli.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-14T22:11:31,634 copying build/lib/pirlygenes/tumor_purity.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-14T22:11:31,638 copying build/lib/pirlygenes/gene_ids.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-14T22:11:31,640 copying build/lib/pirlygenes/sample_quality.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-14T22:11:31,643 copying build/lib/pirlygenes/plot.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-14T22:11:31,649 creating build/bdist.linux-armv7l/wheel/pirlygenes/decomposition 2026-04-14T22:11:31,650 copying build/lib/pirlygenes/decomposition/signature.py -> build/bdist.linux-armv7l/wheel/./pirlygenes/decomposition 2026-04-14T22:11:31,653 copying build/lib/pirlygenes/decomposition/plot.py -> build/bdist.linux-armv7l/wheel/./pirlygenes/decomposition 2026-04-14T22:11:31,655 copying build/lib/pirlygenes/decomposition/panels.py -> build/bdist.linux-armv7l/wheel/./pirlygenes/decomposition 2026-04-14T22:11:31,659 copying build/lib/pirlygenes/decomposition/templates.py -> build/bdist.linux-armv7l/wheel/./pirlygenes/decomposition 2026-04-14T22:11:31,661 copying build/lib/pirlygenes/decomposition/__init__.py -> build/bdist.linux-armv7l/wheel/./pirlygenes/decomposition 2026-04-14T22:11:31,664 copying build/lib/pirlygenes/decomposition/engine.py -> build/bdist.linux-armv7l/wheel/./pirlygenes/decomposition 2026-04-14T22:11:31,667 copying build/lib/pirlygenes/common.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-14T22:11:31,670 copying build/lib/pirlygenes/version.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-14T22:11:31,672 copying build/lib/pirlygenes/gene_sets_cancer.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-14T22:11:31,675 copying build/lib/pirlygenes/aggregate_gene_expression.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-14T22:11:31,678 copying build/lib/pirlygenes/__init__.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-14T22:11:31,680 copying build/lib/pirlygenes/load_dataset.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-14T22:11:31,683 copying build/lib/pirlygenes/plot_data_helpers.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-14T22:11:31,686 copying build/lib/pirlygenes/sample_context.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-14T22:11:31,689 copying build/lib/pirlygenes/therapy_response.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-14T22:11:31,692 creating build/bdist.linux-armv7l/wheel/pirlygenes/data 2026-04-14T22:11:31,694 copying build/lib/pirlygenes/data/bispecific-antibodies-approved.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-14T22:11:31,696 copying build/lib/pirlygenes/data/therapy-response-signatures.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-14T22:11:31,699 copying build/lib/pirlygenes/data/degradation-gene-pairs.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-14T22:11:31,701 copying build/lib/pirlygenes/data/ADC-trials.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-14T22:11:31,704 copying build/lib/pirlygenes/data/multispecific-tcell-engager-trials.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-14T22:11:31,707 copying build/lib/pirlygenes/data/ensembl-id-aliases.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-14T22:11:31,710 copying build/lib/pirlygenes/data/CAR-T-approved.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-14T22:11:31,712 copying build/lib/pirlygenes/data/lineage-genes.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-14T22:11:31,714 copying build/lib/pirlygenes/data/hpa-cell-type-expression.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-14T22:11:31,866 copying build/lib/pirlygenes/data/pan-cancer-expression.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-14T22:11:32,030 copying build/lib/pirlygenes/data/ADC-approved.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-14T22:11:32,032 copying build/lib/pirlygenes/data/surface-proteins.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-14T22:11:32,038 copying build/lib/pirlygenes/data/housekeeping-genes.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-14T22:11:32,040 copying build/lib/pirlygenes/data/gene-sets.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-14T22:11:32,042 copying build/lib/pirlygenes/data/cancer-driver-variants.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-14T22:11:32,044 copying build/lib/pirlygenes/data/TCR-T-trials.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-14T22:11:32,047 copying build/lib/pirlygenes/data/TCR-T-approved.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-14T22:11:32,049 copying build/lib/pirlygenes/data/mitochondrial-genes.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-14T22:11:32,050 copying build/lib/pirlygenes/data/radioligand-targets.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-14T22:11:32,053 copying build/lib/pirlygenes/data/cancer-type-genes.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-14T22:11:32,055 copying build/lib/pirlygenes/data/culture-stress-genes.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-14T22:11:32,057 copying build/lib/pirlygenes/data/cancer-family-panels.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-14T22:11:32,059 copying build/lib/pirlygenes/data/tme-markers.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-14T22:11:32,061 copying build/lib/pirlygenes/data/cancer-surfaceome.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-14T22:11:32,064 copying build/lib/pirlygenes/data/cancer-driver-genes.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-14T22:11:32,067 copying build/lib/pirlygenes/data/cancer-testis-antigens.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-14T22:11:32,071 copying build/lib/pirlygenes/data/estimate-signatures.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-14T22:11:32,073 copying build/lib/pirlygenes/data/ADC-withdrawn.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-14T22:11:32,075 copying build/lib/pirlygenes/load_expression.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-14T22:11:32,078 running install_egg_info 2026-04-14T22:11:32,085 Copying pirlygenes.egg-info to build/bdist.linux-armv7l/wheel/./pirlygenes-4.3.0-py3.11.egg-info 2026-04-14T22:11:32,097 running install_scripts 2026-04-14T22:11:32,110 creating build/bdist.linux-armv7l/wheel/pirlygenes-4.3.0.dist-info/WHEEL 2026-04-14T22:11:32,113 creating '/tmp/pip-wheel-2nt2s_3r/.tmp-imnlkv5n/pirlygenes-4.3.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-04-14T22:11:32,115 adding 'pirlygenes/PLAN-1.4.0-radioligand.md' 2026-04-14T22:11:32,117 adding 'pirlygenes/__init__.py' 2026-04-14T22:11:32,119 adding 'pirlygenes/aggregate_gene_expression.py' 2026-04-14T22:11:32,132 adding 'pirlygenes/cli.py' 2026-04-14T22:11:32,135 adding 'pirlygenes/common.py' 2026-04-14T22:11:32,136 adding 'pirlygenes/gene_ids.py' 2026-04-14T22:11:32,138 adding 'pirlygenes/gene_names.py' 2026-04-14T22:11:32,144 adding 'pirlygenes/gene_sets_cancer.py' 2026-04-14T22:11:32,146 adding 'pirlygenes/load_dataset.py' 2026-04-14T22:11:32,149 adding 'pirlygenes/load_expression.py' 2026-04-14T22:11:32,171 adding 'pirlygenes/plot.py' 2026-04-14T22:11:32,174 adding 'pirlygenes/plot_data_helpers.py' 2026-04-14T22:11:32,179 adding 'pirlygenes/sample_context.py' 2026-04-14T22:11:32,182 adding 'pirlygenes/sample_quality.py' 2026-04-14T22:11:32,185 adding 'pirlygenes/therapy_response.py' 2026-04-14T22:11:32,187 adding 'pirlygenes/transcript_to_gene.py' 2026-04-14T22:11:32,197 adding 'pirlygenes/tumor_purity.py' 2026-04-14T22:11:32,199 adding 'pirlygenes/version.py' 2026-04-14T22:11:32,202 adding 'pirlygenes/data/ADC-approved.csv' 2026-04-14T22:11:32,208 adding 'pirlygenes/data/ADC-trials.csv' 2026-04-14T22:11:32,210 adding 'pirlygenes/data/ADC-withdrawn.csv' 2026-04-14T22:11:32,211 adding 'pirlygenes/data/CAR-T-approved.csv' 2026-04-14T22:11:32,212 adding 'pirlygenes/data/TCR-T-approved.csv' 2026-04-14T22:11:32,216 adding 'pirlygenes/data/TCR-T-trials.csv' 2026-04-14T22:11:32,218 adding 'pirlygenes/data/bispecific-antibodies-approved.csv' 2026-04-14T22:11:32,223 adding 'pirlygenes/data/cancer-driver-genes.csv' 2026-04-14T22:11:32,226 adding 'pirlygenes/data/cancer-driver-variants.csv' 2026-04-14T22:11:32,228 adding 'pirlygenes/data/cancer-family-panels.csv' 2026-04-14T22:11:32,230 adding 'pirlygenes/data/cancer-surfaceome.csv' 2026-04-14T22:11:32,236 adding 'pirlygenes/data/cancer-testis-antigens.csv' 2026-04-14T22:11:32,240 adding 'pirlygenes/data/cancer-type-genes.csv' 2026-04-14T22:11:32,242 adding 'pirlygenes/data/culture-stress-genes.csv' 2026-04-14T22:11:32,243 adding 'pirlygenes/data/degradation-gene-pairs.csv' 2026-04-14T22:11:32,246 adding 'pirlygenes/data/ensembl-id-aliases.csv' 2026-04-14T22:11:32,248 adding 'pirlygenes/data/estimate-signatures.csv' 2026-04-14T22:11:32,250 adding 'pirlygenes/data/gene-sets.csv' 2026-04-14T22:11:32,251 adding 'pirlygenes/data/housekeeping-genes.csv' 2026-04-14T22:11:34,910 adding 'pirlygenes/data/hpa-cell-type-expression.csv' 2026-04-14T22:11:34,960 adding 'pirlygenes/data/lineage-genes.csv' 2026-04-14T22:11:34,961 adding 'pirlygenes/data/mitochondrial-genes.csv' 2026-04-14T22:11:34,963 adding 'pirlygenes/data/multispecific-tcell-engager-trials.csv' 2026-04-14T22:11:38,075 adding 'pirlygenes/data/pan-cancer-expression.csv' 2026-04-14T22:11:38,147 adding 'pirlygenes/data/radioligand-targets.csv' 2026-04-14T22:11:38,170 adding 'pirlygenes/data/surface-proteins.csv' 2026-04-14T22:11:38,174 adding 'pirlygenes/data/therapy-response-signatures.csv' 2026-04-14T22:11:38,175 adding 'pirlygenes/data/tme-markers.csv' 2026-04-14T22:11:38,177 adding 'pirlygenes/decomposition/__init__.py' 2026-04-14T22:11:38,182 adding 'pirlygenes/decomposition/engine.py' 2026-04-14T22:11:38,185 adding 'pirlygenes/decomposition/panels.py' 2026-04-14T22:11:38,187 adding 'pirlygenes/decomposition/plot.py' 2026-04-14T22:11:38,189 adding 'pirlygenes/decomposition/signature.py' 2026-04-14T22:11:38,191 adding 'pirlygenes/decomposition/templates.py' 2026-04-14T22:11:38,195 adding 'pirlygenes-4.3.0.dist-info/licenses/LICENSE' 2026-04-14T22:11:38,200 adding 'pirlygenes-4.3.0.dist-info/METADATA' 2026-04-14T22:11:38,201 adding 'pirlygenes-4.3.0.dist-info/WHEEL' 2026-04-14T22:11:38,202 adding 'pirlygenes-4.3.0.dist-info/entry_points.txt' 2026-04-14T22:11:38,203 adding 'pirlygenes-4.3.0.dist-info/top_level.txt' 2026-04-14T22:11:38,204 adding 'pirlygenes-4.3.0.dist-info/RECORD' 2026-04-14T22:11:38,274 removing build/bdist.linux-armv7l/wheel 2026-04-14T22:11:38,406 Building wheel for pirlygenes (pyproject.toml): finished with status 'done' 2026-04-14T22:11:38,548 Created wheel for pirlygenes: filename=pirlygenes-4.3.0-py3-none-any.whl size=6694005 sha256=bbb4b6dc94d191444ef43d8c874da5c69048dbb87236afb42103e677e5a07e36 2026-04-14T22:11:38,550 Stored in directory: /tmp/pip-ephem-wheel-cache-vz8lmf0b/wheels/2a/8e/2d/abd9fc5b54ef482840b09d3139beeb732a2281b30b8b4df28d 2026-04-14T22:11:38,569 Successfully built pirlygenes 2026-04-14T22:11:38,744 Removed build tracker: '/tmp/pip-build-tracker-g8x88wxk'