2026-04-16T03:47:40,858 Created temporary directory: /tmp/pip-ephem-wheel-cache-els78o0a 2026-04-16T03:47:40,860 Created temporary directory: /tmp/pip-build-tracker-k85y95uj 2026-04-16T03:47:40,861 Initialized build tracking at /tmp/pip-build-tracker-k85y95uj 2026-04-16T03:47:40,861 Created build tracker: /tmp/pip-build-tracker-k85y95uj 2026-04-16T03:47:40,862 Entered build tracker: /tmp/pip-build-tracker-k85y95uj 2026-04-16T03:47:40,862 Created temporary directory: /tmp/pip-wheel-lo8mucq6 2026-04-16T03:47:40,865 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-16T03:47:40,868 Created temporary directory: /tmp/pip-ephem-wheel-cache-lv4s2flf 2026-04-16T03:47:40,889 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-16T03:47:40,893 2 location(s) to search for versions of varcode: 2026-04-16T03:47:40,893 * https://pypi.org/simple/varcode/ 2026-04-16T03:47:40,893 * https://www.piwheels.org/simple/varcode/ 2026-04-16T03:47:40,894 Fetching project page and analyzing links: https://pypi.org/simple/varcode/ 2026-04-16T03:47:40,894 Getting page https://pypi.org/simple/varcode/ 2026-04-16T03:47:40,896 Found index url https://pypi.org/simple 2026-04-16T03:47:41,049 Fetched page https://pypi.org/simple/varcode/ as application/vnd.pypi.simple.v1+json 2026-04-16T03:47:41,068 Found link https://files.pythonhosted.org/packages/77/c8/f88b644d2ebbc1bf72dd5d1609c2e399e14e41c90b4b364ef3968e304b68/varcode-0.0.0.tar.gz (from 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https://www.piwheels.org/simple/varcode/) 2026-04-16T03:47:41,397 Skipping link: No binaries permitted for varcode: https://archive1.piwheels.org/simple/varcode/varcode-0.0.2-py3-none-any.whl#sha256=75b17e9aad29be21e31e6e6eb7e670be2cb487b645169e1df93fb43d6bbef03f (from https://www.piwheels.org/simple/varcode/) 2026-04-16T03:47:41,398 Skipping link: not a file: https://www.piwheels.org/simple/varcode/ 2026-04-16T03:47:41,399 Skipping link: not a file: https://pypi.org/simple/varcode/ 2026-04-16T03:47:41,429 Given no hashes to check 1 links for project 'varcode': discarding no candidates 2026-04-16T03:47:41,449 Collecting varcode==2.11.0 2026-04-16T03:47:41,451 Created temporary directory: /tmp/pip-unpack-k_j6i6mh 2026-04-16T03:47:41,677 Downloading varcode-2.11.0.tar.gz (163 kB) 2026-04-16T03:47:41,957 Added varcode==2.11.0 from https://files.pythonhosted.org/packages/b0/86/bf083b3e94cbe05e1fe63d3023a9a4efbfa3bd5c542df38339d7c729d3cd/varcode-2.11.0.tar.gz to build tracker '/tmp/pip-build-tracker-k85y95uj' 2026-04-16T03:47:41,961 Created temporary directory: /tmp/pip-build-env-v66pccd6 2026-04-16T03:47:41,966 Installing build dependencies: started 2026-04-16T03:47:41,967 Running command pip subprocess to install build dependencies 2026-04-16T03:47:43,126 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-04-16T03:47:43,607 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-16T03:47:43,630 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-16T03:47:45,472 Collecting setuptools>=64 2026-04-16T03:47:45,562 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-04-16T03:47:48,526 Installing collected packages: setuptools 2026-04-16T03:47:51,542 Successfully installed setuptools-82.0.1 2026-04-16T03:47:51,808 Installing build dependencies: finished with status 'done' 2026-04-16T03:47:51,815 Getting requirements to build wheel: started 2026-04-16T03:47:51,816 Running command Getting requirements to build wheel 2026-04-16T03:47:52,500 /tmp/pip-build-env-v66pccd6/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-16T03:47:52,500 !! 2026-04-16T03:47:52,501 ******************************************************************************** 2026-04-16T03:47:52,502 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-16T03:47:52,503 License :: OSI Approved :: Apache Software License 2026-04-16T03:47:52,504 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-16T03:47:52,505 ******************************************************************************** 2026-04-16T03:47:52,506 !! 2026-04-16T03:47:52,506 dist._finalize_license_expression() 2026-04-16T03:47:52,507 /tmp/pip-build-env-v66pccd6/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-16T03:47:52,508 !! 2026-04-16T03:47:52,509 ******************************************************************************** 2026-04-16T03:47:52,510 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-16T03:47:52,511 License :: OSI Approved :: Apache Software License 2026-04-16T03:47:52,512 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-16T03:47:52,513 ******************************************************************************** 2026-04-16T03:47:52,514 !! 2026-04-16T03:47:52,514 self._finalize_license_expression() 2026-04-16T03:47:52,517 running egg_info 2026-04-16T03:47:52,523 writing varcode.egg-info/PKG-INFO 2026-04-16T03:47:52,527 writing dependency_links to varcode.egg-info/dependency_links.txt 2026-04-16T03:47:52,529 writing entry points to varcode.egg-info/entry_points.txt 2026-04-16T03:47:52,531 writing requirements to varcode.egg-info/requires.txt 2026-04-16T03:47:52,532 writing top-level names to varcode.egg-info/top_level.txt 2026-04-16T03:47:52,557 reading manifest file 'varcode.egg-info/SOURCES.txt' 2026-04-16T03:47:52,564 reading manifest template 'MANIFEST.in' 2026-04-16T03:47:52,565 adding license file 'LICENSE' 2026-04-16T03:47:52,572 writing manifest file 'varcode.egg-info/SOURCES.txt' 2026-04-16T03:47:52,669 Getting requirements to build wheel: finished with status 'done' 2026-04-16T03:47:52,673 Created temporary directory: /tmp/pip-modern-metadata-_vqi0nii 2026-04-16T03:47:52,675 Preparing metadata (pyproject.toml): started 2026-04-16T03:47:52,676 Running command Preparing metadata (pyproject.toml) 2026-04-16T03:47:53,354 /tmp/pip-build-env-v66pccd6/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-16T03:47:53,354 !! 2026-04-16T03:47:53,355 ******************************************************************************** 2026-04-16T03:47:53,356 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-16T03:47:53,357 License :: OSI Approved :: Apache Software License 2026-04-16T03:47:53,358 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-16T03:47:53,358 ******************************************************************************** 2026-04-16T03:47:53,360 !! 2026-04-16T03:47:53,360 dist._finalize_license_expression() 2026-04-16T03:47:53,361 /tmp/pip-build-env-v66pccd6/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-16T03:47:53,362 !! 2026-04-16T03:47:53,363 ******************************************************************************** 2026-04-16T03:47:53,363 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-16T03:47:53,365 License :: OSI Approved :: Apache Software License 2026-04-16T03:47:53,366 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-16T03:47:53,367 ******************************************************************************** 2026-04-16T03:47:53,368 !! 2026-04-16T03:47:53,368 self._finalize_license_expression() 2026-04-16T03:47:53,369 running dist_info 2026-04-16T03:47:53,377 creating /tmp/pip-modern-metadata-_vqi0nii/varcode.egg-info 2026-04-16T03:47:53,378 writing /tmp/pip-modern-metadata-_vqi0nii/varcode.egg-info/PKG-INFO 2026-04-16T03:47:53,382 writing dependency_links to /tmp/pip-modern-metadata-_vqi0nii/varcode.egg-info/dependency_links.txt 2026-04-16T03:47:53,383 writing entry points to /tmp/pip-modern-metadata-_vqi0nii/varcode.egg-info/entry_points.txt 2026-04-16T03:47:53,385 writing requirements to /tmp/pip-modern-metadata-_vqi0nii/varcode.egg-info/requires.txt 2026-04-16T03:47:53,386 writing top-level names to /tmp/pip-modern-metadata-_vqi0nii/varcode.egg-info/top_level.txt 2026-04-16T03:47:53,388 writing manifest file '/tmp/pip-modern-metadata-_vqi0nii/varcode.egg-info/SOURCES.txt' 2026-04-16T03:47:53,411 reading manifest file '/tmp/pip-modern-metadata-_vqi0nii/varcode.egg-info/SOURCES.txt' 2026-04-16T03:47:53,413 reading manifest template 'MANIFEST.in' 2026-04-16T03:47:53,414 adding license file 'LICENSE' 2026-04-16T03:47:53,419 writing manifest file '/tmp/pip-modern-metadata-_vqi0nii/varcode.egg-info/SOURCES.txt' 2026-04-16T03:47:53,420 creating '/tmp/pip-modern-metadata-_vqi0nii/varcode-2.11.0.dist-info' 2026-04-16T03:47:53,545 Preparing metadata (pyproject.toml): finished with status 'done' 2026-04-16T03:47:53,550 Source in /tmp/pip-wheel-lo8mucq6/varcode_0fce8bbefc4f4f7bbe78b664cf162875 has version 2.11.0, which satisfies requirement varcode==2.11.0 from https://files.pythonhosted.org/packages/b0/86/bf083b3e94cbe05e1fe63d3023a9a4efbfa3bd5c542df38339d7c729d3cd/varcode-2.11.0.tar.gz 2026-04-16T03:47:53,551 Removed varcode==2.11.0 from https://files.pythonhosted.org/packages/b0/86/bf083b3e94cbe05e1fe63d3023a9a4efbfa3bd5c542df38339d7c729d3cd/varcode-2.11.0.tar.gz from build tracker '/tmp/pip-build-tracker-k85y95uj' 2026-04-16T03:47:53,557 Created temporary directory: /tmp/pip-unpack-ucgv2xlw 2026-04-16T03:47:53,558 Building wheels for collected packages: varcode 2026-04-16T03:47:53,563 Created temporary directory: /tmp/pip-wheel-ixmvymbu 2026-04-16T03:47:53,564 Destination directory: /tmp/pip-wheel-ixmvymbu 2026-04-16T03:47:53,566 Building wheel for varcode (pyproject.toml): started 2026-04-16T03:47:53,567 Running command Building wheel for varcode (pyproject.toml) 2026-04-16T03:47:54,181 /tmp/pip-build-env-v66pccd6/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-16T03:47:54,181 !! 2026-04-16T03:47:54,182 ******************************************************************************** 2026-04-16T03:47:54,183 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-16T03:47:54,184 License :: OSI Approved :: Apache Software License 2026-04-16T03:47:54,185 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-16T03:47:54,186 ******************************************************************************** 2026-04-16T03:47:54,187 !! 2026-04-16T03:47:54,188 dist._finalize_license_expression() 2026-04-16T03:47:54,188 /tmp/pip-build-env-v66pccd6/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-16T03:47:54,189 !! 2026-04-16T03:47:54,190 ******************************************************************************** 2026-04-16T03:47:54,191 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-16T03:47:54,192 License :: OSI Approved :: Apache Software License 2026-04-16T03:47:54,193 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-16T03:47:54,194 ******************************************************************************** 2026-04-16T03:47:54,195 !! 2026-04-16T03:47:54,195 self._finalize_license_expression() 2026-04-16T03:47:54,196 running bdist_wheel 2026-04-16T03:47:54,206 running build 2026-04-16T03:47:54,207 running build_py 2026-04-16T03:47:54,213 creating build/lib/varcode 2026-04-16T03:47:54,215 copying varcode/util.py -> build/lib/varcode 2026-04-16T03:47:54,217 copying varcode/version.py -> build/lib/varcode 2026-04-16T03:47:54,219 copying varcode/splice_outcomes.py -> build/lib/varcode 2026-04-16T03:47:54,222 copying varcode/errors.py -> build/lib/varcode 2026-04-16T03:47:54,224 copying varcode/maf.py -> build/lib/varcode 2026-04-16T03:47:54,226 copying varcode/vcf.py -> build/lib/varcode 2026-04-16T03:47:54,229 copying varcode/reference.py -> build/lib/varcode 2026-04-16T03:47:54,231 copying varcode/variant.py -> build/lib/varcode 2026-04-16T03:47:54,234 copying varcode/csv_helpers.py -> build/lib/varcode 2026-04-16T03:47:54,236 copying varcode/genotype.py -> build/lib/varcode 2026-04-16T03:47:54,238 copying varcode/vcf_output.py -> build/lib/varcode 2026-04-16T03:47:54,240 copying varcode/string_helpers.py -> build/lib/varcode 2026-04-16T03:47:54,242 copying varcode/ucsc_reference_names.py -> build/lib/varcode 2026-04-16T03:47:54,244 copying varcode/mutant_transcript.py -> build/lib/varcode 2026-04-16T03:47:54,246 copying varcode/variant_collection.py -> build/lib/varcode 2026-04-16T03:47:54,249 copying varcode/nucleotides.py -> build/lib/varcode 2026-04-16T03:47:54,250 copying varcode/common.py -> build/lib/varcode 2026-04-16T03:47:54,252 copying varcode/__init__.py -> build/lib/varcode 2026-04-16T03:47:54,255 creating build/lib/varcode/annotators 2026-04-16T03:47:54,255 copying varcode/annotators/registry.py -> build/lib/varcode/annotators 2026-04-16T03:47:54,258 copying varcode/annotators/protein_diff.py -> build/lib/varcode/annotators 2026-04-16T03:47:54,260 copying varcode/annotators/__init__.py -> build/lib/varcode/annotators 2026-04-16T03:47:54,262 copying varcode/annotators/legacy.py -> build/lib/varcode/annotators 2026-04-16T03:47:54,264 creating build/lib/varcode/cli 2026-04-16T03:47:54,265 copying varcode/cli/genes_script.py -> build/lib/varcode/cli 2026-04-16T03:47:54,267 copying varcode/cli/effects_script.py -> build/lib/varcode/cli 2026-04-16T03:47:54,268 copying varcode/cli/variant_args.py -> build/lib/varcode/cli 2026-04-16T03:47:54,271 copying varcode/cli/version_info.py -> build/lib/varcode/cli 2026-04-16T03:47:54,272 copying varcode/cli/__init__.py -> build/lib/varcode/cli 2026-04-16T03:47:54,275 creating build/lib/varcode/effects 2026-04-16T03:47:54,276 copying varcode/effects/transcript_helpers.py -> build/lib/varcode/effects 2026-04-16T03:47:54,278 copying varcode/effects/effect_prediction.py -> build/lib/varcode/effects 2026-04-16T03:47:54,280 copying varcode/effects/translate.py -> build/lib/varcode/effects 2026-04-16T03:47:54,282 copying varcode/effects/effect_collection.py -> build/lib/varcode/effects 2026-04-16T03:47:54,285 copying varcode/effects/effect_ordering.py -> build/lib/varcode/effects 2026-04-16T03:47:54,288 copying varcode/effects/effect_prediction_coding.py -> build/lib/varcode/effects 2026-04-16T03:47:54,290 copying varcode/effects/codon_tables.py -> build/lib/varcode/effects 2026-04-16T03:47:54,292 copying varcode/effects/effect_prediction_coding_frameshift.py -> build/lib/varcode/effects 2026-04-16T03:47:54,295 copying varcode/effects/classify.py -> build/lib/varcode/effects 2026-04-16T03:47:54,297 copying varcode/effects/effect_helpers.py -> build/lib/varcode/effects 2026-04-16T03:47:54,299 copying varcode/effects/effect_classes.py -> build/lib/varcode/effects 2026-04-16T03:47:54,302 copying varcode/effects/effect_prediction_coding_in_frame.py -> build/lib/varcode/effects 2026-04-16T03:47:54,304 copying varcode/effects/common.py -> build/lib/varcode/effects 2026-04-16T03:47:54,306 copying varcode/effects/__init__.py -> build/lib/varcode/effects 2026-04-16T03:47:54,308 copying varcode/effects/fast_path.py -> build/lib/varcode/effects 2026-04-16T03:47:54,310 copying varcode/effects/mutate.py -> build/lib/varcode/effects 2026-04-16T03:47:54,311 running egg_info 2026-04-16T03:47:54,321 writing varcode.egg-info/PKG-INFO 2026-04-16T03:47:54,324 writing dependency_links to varcode.egg-info/dependency_links.txt 2026-04-16T03:47:54,326 writing entry points to varcode.egg-info/entry_points.txt 2026-04-16T03:47:54,327 writing requirements to varcode.egg-info/requires.txt 2026-04-16T03:47:54,328 writing top-level names to varcode.egg-info/top_level.txt 2026-04-16T03:47:54,342 reading manifest file 'varcode.egg-info/SOURCES.txt' 2026-04-16T03:47:54,349 reading manifest template 'MANIFEST.in' 2026-04-16T03:47:54,350 adding license file 'LICENSE' 2026-04-16T03:47:54,356 writing manifest file 'varcode.egg-info/SOURCES.txt' 2026-04-16T03:47:54,361 copying varcode/cli/logging.conf -> build/lib/varcode/cli 2026-04-16T03:47:54,374 installing to build/bdist.linux-armv7l/wheel 2026-04-16T03:47:54,375 running install 2026-04-16T03:47:54,398 running install_lib 2026-04-16T03:47:54,403 creating build/bdist.linux-armv7l/wheel 2026-04-16T03:47:54,406 creating build/bdist.linux-armv7l/wheel/varcode 2026-04-16T03:47:54,407 creating build/bdist.linux-armv7l/wheel/varcode/annotators 2026-04-16T03:47:54,408 copying build/lib/varcode/annotators/registry.py -> build/bdist.linux-armv7l/wheel/./varcode/annotators 2026-04-16T03:47:54,411 copying build/lib/varcode/annotators/protein_diff.py -> build/bdist.linux-armv7l/wheel/./varcode/annotators 2026-04-16T03:47:54,413 copying build/lib/varcode/annotators/__init__.py -> build/bdist.linux-armv7l/wheel/./varcode/annotators 2026-04-16T03:47:54,415 copying build/lib/varcode/annotators/legacy.py -> build/bdist.linux-armv7l/wheel/./varcode/annotators 2026-04-16T03:47:54,417 copying build/lib/varcode/util.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-04-16T03:47:54,419 creating build/bdist.linux-armv7l/wheel/varcode/cli 2026-04-16T03:47:54,420 copying build/lib/varcode/cli/genes_script.py -> build/bdist.linux-armv7l/wheel/./varcode/cli 2026-04-16T03:47:54,422 copying build/lib/varcode/cli/logging.conf -> build/bdist.linux-armv7l/wheel/./varcode/cli 2026-04-16T03:47:54,424 copying build/lib/varcode/cli/effects_script.py -> build/bdist.linux-armv7l/wheel/./varcode/cli 2026-04-16T03:47:54,425 copying build/lib/varcode/cli/variant_args.py -> build/bdist.linux-armv7l/wheel/./varcode/cli 2026-04-16T03:47:54,428 copying build/lib/varcode/cli/version_info.py -> build/bdist.linux-armv7l/wheel/./varcode/cli 2026-04-16T03:47:54,430 copying build/lib/varcode/cli/__init__.py -> build/bdist.linux-armv7l/wheel/./varcode/cli 2026-04-16T03:47:54,431 copying build/lib/varcode/version.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-04-16T03:47:54,433 copying build/lib/varcode/splice_outcomes.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-04-16T03:47:54,436 copying build/lib/varcode/errors.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-04-16T03:47:54,438 copying build/lib/varcode/maf.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-04-16T03:47:54,440 copying build/lib/varcode/vcf.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-04-16T03:47:54,443 copying build/lib/varcode/reference.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-04-16T03:47:54,445 copying build/lib/varcode/variant.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-04-16T03:47:54,448 copying build/lib/varcode/csv_helpers.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-04-16T03:47:54,450 copying build/lib/varcode/genotype.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-04-16T03:47:54,452 copying build/lib/varcode/vcf_output.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-04-16T03:47:54,455 copying build/lib/varcode/string_helpers.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-04-16T03:47:54,457 copying build/lib/varcode/ucsc_reference_names.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-04-16T03:47:54,459 copying build/lib/varcode/mutant_transcript.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-04-16T03:47:54,461 copying build/lib/varcode/variant_collection.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-04-16T03:47:54,464 creating build/bdist.linux-armv7l/wheel/varcode/effects 2026-04-16T03:47:54,466 copying build/lib/varcode/effects/transcript_helpers.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-04-16T03:47:54,468 copying build/lib/varcode/effects/effect_prediction.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-04-16T03:47:54,470 copying build/lib/varcode/effects/translate.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-04-16T03:47:54,473 copying build/lib/varcode/effects/effect_collection.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-04-16T03:47:54,475 copying build/lib/varcode/effects/effect_ordering.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-04-16T03:47:54,478 copying build/lib/varcode/effects/effect_prediction_coding.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-04-16T03:47:54,480 copying build/lib/varcode/effects/codon_tables.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-04-16T03:47:54,483 copying build/lib/varcode/effects/effect_prediction_coding_frameshift.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-04-16T03:47:54,485 copying build/lib/varcode/effects/classify.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-04-16T03:47:54,487 copying build/lib/varcode/effects/effect_helpers.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-04-16T03:47:54,489 copying build/lib/varcode/effects/effect_classes.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-04-16T03:47:54,492 copying build/lib/varcode/effects/effect_prediction_coding_in_frame.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-04-16T03:47:54,494 copying build/lib/varcode/effects/common.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-04-16T03:47:54,496 copying build/lib/varcode/effects/__init__.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-04-16T03:47:54,498 copying build/lib/varcode/effects/fast_path.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-04-16T03:47:54,500 copying build/lib/varcode/effects/mutate.py -> build/bdist.linux-armv7l/wheel/./varcode/effects 2026-04-16T03:47:54,502 copying build/lib/varcode/nucleotides.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-04-16T03:47:54,504 copying build/lib/varcode/common.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-04-16T03:47:54,505 copying build/lib/varcode/__init__.py -> build/bdist.linux-armv7l/wheel/./varcode 2026-04-16T03:47:54,507 running install_egg_info 2026-04-16T03:47:54,512 Copying varcode.egg-info to build/bdist.linux-armv7l/wheel/./varcode-2.11.0-py3.11.egg-info 2026-04-16T03:47:54,524 running install_scripts 2026-04-16T03:47:54,537 creating build/bdist.linux-armv7l/wheel/varcode-2.11.0.dist-info/WHEEL 2026-04-16T03:47:54,539 creating '/tmp/pip-wheel-ixmvymbu/.tmp-6_4q_ko_/varcode-2.11.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-04-16T03:47:54,542 adding 'varcode/__init__.py' 2026-04-16T03:47:54,544 adding 'varcode/common.py' 2026-04-16T03:47:54,545 adding 'varcode/csv_helpers.py' 2026-04-16T03:47:54,547 adding 'varcode/errors.py' 2026-04-16T03:47:54,549 adding 'varcode/genotype.py' 2026-04-16T03:47:54,550 adding 'varcode/maf.py' 2026-04-16T03:47:54,553 adding 'varcode/mutant_transcript.py' 2026-04-16T03:47:54,554 adding 'varcode/nucleotides.py' 2026-04-16T03:47:54,556 adding 'varcode/reference.py' 2026-04-16T03:47:54,560 adding 'varcode/splice_outcomes.py' 2026-04-16T03:47:54,562 adding 'varcode/string_helpers.py' 2026-04-16T03:47:54,563 adding 'varcode/ucsc_reference_names.py' 2026-04-16T03:47:54,565 adding 'varcode/util.py' 2026-04-16T03:47:54,567 adding 'varcode/variant.py' 2026-04-16T03:47:54,571 adding 'varcode/variant_collection.py' 2026-04-16T03:47:54,574 adding 'varcode/vcf.py' 2026-04-16T03:47:54,576 adding 'varcode/vcf_output.py' 2026-04-16T03:47:54,577 adding 'varcode/version.py' 2026-04-16T03:47:54,579 adding 'varcode/annotators/__init__.py' 2026-04-16T03:47:54,581 adding 'varcode/annotators/legacy.py' 2026-04-16T03:47:54,582 adding 'varcode/annotators/protein_diff.py' 2026-04-16T03:47:54,584 adding 'varcode/annotators/registry.py' 2026-04-16T03:47:54,586 adding 'varcode/cli/__init__.py' 2026-04-16T03:47:54,587 adding 'varcode/cli/effects_script.py' 2026-04-16T03:47:54,588 adding 'varcode/cli/genes_script.py' 2026-04-16T03:47:54,590 adding 'varcode/cli/logging.conf' 2026-04-16T03:47:54,591 adding 'varcode/cli/variant_args.py' 2026-04-16T03:47:54,592 adding 'varcode/cli/version_info.py' 2026-04-16T03:47:54,594 adding 'varcode/effects/__init__.py' 2026-04-16T03:47:54,596 adding 'varcode/effects/classify.py' 2026-04-16T03:47:54,598 adding 'varcode/effects/codon_tables.py' 2026-04-16T03:47:54,599 adding 'varcode/effects/common.py' 2026-04-16T03:47:54,602 adding 'varcode/effects/effect_classes.py' 2026-04-16T03:47:54,605 adding 'varcode/effects/effect_collection.py' 2026-04-16T03:47:54,607 adding 'varcode/effects/effect_helpers.py' 2026-04-16T03:47:54,609 adding 'varcode/effects/effect_ordering.py' 2026-04-16T03:47:54,612 adding 'varcode/effects/effect_prediction.py' 2026-04-16T03:47:54,614 adding 'varcode/effects/effect_prediction_coding.py' 2026-04-16T03:47:54,615 adding 'varcode/effects/effect_prediction_coding_frameshift.py' 2026-04-16T03:47:54,617 adding 'varcode/effects/effect_prediction_coding_in_frame.py' 2026-04-16T03:47:54,618 adding 'varcode/effects/fast_path.py' 2026-04-16T03:47:54,620 adding 'varcode/effects/mutate.py' 2026-04-16T03:47:54,621 adding 'varcode/effects/transcript_helpers.py' 2026-04-16T03:47:54,623 adding 'varcode/effects/translate.py' 2026-04-16T03:47:54,626 adding 'varcode-2.11.0.dist-info/licenses/LICENSE' 2026-04-16T03:47:54,628 adding 'varcode-2.11.0.dist-info/METADATA' 2026-04-16T03:47:54,629 adding 'varcode-2.11.0.dist-info/WHEEL' 2026-04-16T03:47:54,630 adding 'varcode-2.11.0.dist-info/entry_points.txt' 2026-04-16T03:47:54,631 adding 'varcode-2.11.0.dist-info/top_level.txt' 2026-04-16T03:47:54,632 adding 'varcode-2.11.0.dist-info/RECORD' 2026-04-16T03:47:54,634 removing build/bdist.linux-armv7l/wheel 2026-04-16T03:47:54,743 Building wheel for varcode (pyproject.toml): finished with status 'done' 2026-04-16T03:47:54,750 Created wheel for varcode: filename=varcode-2.11.0-py3-none-any.whl size=126668 sha256=444d6db56d231e4028e8c0b543102811eb9ea9116bbdc24a915cdc1999f99ffa 2026-04-16T03:47:54,751 Stored in directory: /tmp/pip-ephem-wheel-cache-lv4s2flf/wheels/47/49/11/5c8a6fa4a61fc0b4bda5f5e48de3d961241fea195dea07ff44 2026-04-16T03:47:54,764 Successfully built varcode 2026-04-16T03:47:54,770 Removed build tracker: '/tmp/pip-build-tracker-k85y95uj'