2026-04-16T23:40:14,930 Created temporary directory: /tmp/pip-ephem-wheel-cache-fkz5x5sj 2026-04-16T23:40:14,932 Created temporary directory: /tmp/pip-build-tracker-xlupa_uh 2026-04-16T23:40:14,932 Initialized build tracking at /tmp/pip-build-tracker-xlupa_uh 2026-04-16T23:40:14,933 Created build tracker: /tmp/pip-build-tracker-xlupa_uh 2026-04-16T23:40:14,933 Entered build tracker: /tmp/pip-build-tracker-xlupa_uh 2026-04-16T23:40:14,934 Created temporary directory: /tmp/pip-wheel-atafd8_i 2026-04-16T23:40:14,937 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-16T23:40:14,939 Created temporary directory: /tmp/pip-ephem-wheel-cache-_ijgdu65 2026-04-16T23:40:14,960 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-16T23:40:14,964 2 location(s) to search for versions of pirlygenes: 2026-04-16T23:40:14,964 * https://pypi.org/simple/pirlygenes/ 2026-04-16T23:40:14,964 * https://www.piwheels.org/simple/pirlygenes/ 2026-04-16T23:40:14,964 Fetching project page and analyzing links: https://pypi.org/simple/pirlygenes/ 2026-04-16T23:40:14,965 Getting page https://pypi.org/simple/pirlygenes/ 2026-04-16T23:40:14,966 Found index url https://pypi.org/simple 2026-04-16T23:40:15,195 Fetched page https://pypi.org/simple/pirlygenes/ as application/vnd.pypi.simple.v1+json 2026-04-16T23:40:15,222 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/2e/66/a994711ece0c32dc4037b2c20acb069375f8eb2c80bdcca3a9efa47fdaee/pirlygenes-1.7.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,223 Found link https://files.pythonhosted.org/packages/17/fe/bcdacc3535105e4aed789ffd67937b0a725f5eaf16e19e2d70d7d9994985/pirlygenes-1.7.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 1.7.0 2026-04-16T23:40:15,224 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/59/b0/3e2df98a4c7e570e430d5a43b78c4325669dc94f670df919535730ad97e4/pirlygenes-1.8.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,225 Found link https://files.pythonhosted.org/packages/4b/7c/57808dd823cb43e0775fef54e28607a61d6e34549ef6c21f02e85567e13a/pirlygenes-1.8.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 1.8.0 2026-04-16T23:40:15,226 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/9a/8d/f18f1d145c3cc415d28137493c5cb8e758516d9ac9633fc74cb4f86a318a/pirlygenes-1.8.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,227 Found link https://files.pythonhosted.org/packages/61/0c/c3f0aff27c3758ba3f3ee1f4a63a05238e02043251af230032d9ba555624/pirlygenes-1.8.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 1.8.1 2026-04-16T23:40:15,228 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/24/35/2c1111a823202625bf5719038d745faaa60ed3613bc790db7a365d0d9e91/pirlygenes-1.9.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,229 Found link https://files.pythonhosted.org/packages/00/21/33762d0e1497cb8f52920f8804591991b077145275a9bb472d54cb34bd3b/pirlygenes-1.9.0.tar.gz (from 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https://files.pythonhosted.org/packages/f0/57/519f98c3e3ce7414973c34a35b56e0123e63c2397c1c28a40f52096110e8/pirlygenes-2.0.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.0.1 2026-04-16T23:40:15,233 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/b2/a5/eb85bc710dc92ed90930681df0d0727ba7c8adce5f597218b60c8e749abb/pirlygenes-2.1.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,234 Found link https://files.pythonhosted.org/packages/ac/1c/535ab059a16f501c104975a9afdbe26292625c5f6b4565dfaff29827dae5/pirlygenes-2.1.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.1.0 2026-04-16T23:40:15,234 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/31/67/9fb299b51b80ea11807d6cca24343e9b5bcd4f343f5590f443f4ab27d256/pirlygenes-2.2.0-py3-none-any.whl (from 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2026-04-16T23:40:15,241 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/8a/44/da6370091aea72fec9b67e936a15ae4ebdf9dff908aa9d19047e94159d04/pirlygenes-2.3.2-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,242 Found link https://files.pythonhosted.org/packages/10/a9/907cc4508814906e8c990c01f4f5a8e876d8494a06e48b3231bc8cb0fc76/pirlygenes-2.3.2.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.3.2 2026-04-16T23:40:15,243 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/3f/b6/830da154d45d5ac46ae4fec7615e8cad6fdc54a8977e3ad5d5b719b3e381/pirlygenes-2.4.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,244 Found link https://files.pythonhosted.org/packages/72/cb/85849617feaf50f329a0545583033d697e353ad48f34484f70c94a38a7fe/pirlygenes-2.4.0.tar.gz (from 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https://files.pythonhosted.org/packages/6a/f7/cd7bb912ebd9a8fd5678378444dd4cbf57614f841b83aca8d8ae68221512/pirlygenes-2.4.2.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.4.2 2026-04-16T23:40:15,247 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/06/ba/c6259e141db6ae01ab36e9b24878291184fa9551fbba7d8cc122d162370a/pirlygenes-2.5.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,248 Found link https://files.pythonhosted.org/packages/2a/02/a683073293d6e1567e993c5ddeb5b4f20cecf9c143b7c34ca69c6b0fe0bf/pirlygenes-2.5.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.5.0 2026-04-16T23:40:15,249 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/3b/3a/d237a82d8794a11a26a1ef9bfff88a11e9bdf47b1f6505e328954ced2b0e/pirlygenes-2.5.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,250 Found link https://files.pythonhosted.org/packages/b5/e2/879e92ab87381e4ef635263624155d4f2331588bc05aea8a223225f108f7/pirlygenes-2.5.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.5.1 2026-04-16T23:40:15,251 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/a4/c0/3c64fac1cdedad5802d2905b10f836c5a5d805a9dc0d0beeda285a065df3/pirlygenes-2.6.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,251 Found link https://files.pythonhosted.org/packages/2a/df/7ffd654f123a21c608210fe4ed416bda8e56ceb36743d27a8fa4b9eace1e/pirlygenes-2.6.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.6.0 2026-04-16T23:40:15,252 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/f0/d2/7ffa0b7cc699219de0878a38a56a56cdae06b1ca3c9ff50044206427a807/pirlygenes-2.6.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,253 Found link https://files.pythonhosted.org/packages/f6/b2/938ef2e7e5d2a6bee6875aeeb1ed25157d2cdbec1b11345a753cd45565e5/pirlygenes-2.6.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.6.1 2026-04-16T23:40:15,254 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/7b/fb/bc52d124faa5327f959bd76cc38660bc2a83aecb0407925ea1049ef3959b/pirlygenes-2.7.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,255 Found link https://files.pythonhosted.org/packages/15/67/d13b9f14153a2b9aea2b84de47f2e83691875d365f34778b508481422836/pirlygenes-2.7.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.7.0 2026-04-16T23:40:15,256 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/57/7c/f087e5968735238e4782164c5af185405be0eec060121b61c187f5c55429/pirlygenes-2.7.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,257 Found link https://files.pythonhosted.org/packages/0a/9f/6f1a18016493c71ae63b236e4e5186535b85f15188b969cfded686dec47a/pirlygenes-2.7.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.7.1 2026-04-16T23:40:15,257 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/34/d6/ffd2ae0d7511cb22ee2b857520a19acb21ff834f8d8baaa2e70c4c542d7f/pirlygenes-2.8.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,258 Found link https://files.pythonhosted.org/packages/33/84/8cd197f6dc1169477bc562d9d667a30ccb0488747c3fe5682e91dea7e16c/pirlygenes-2.8.0.tar.gz (from 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https://files.pythonhosted.org/packages/70/9e/1157f5be862f2934c4601e58c170f604ec09a41f39353e19db0cfabd3747/pirlygenes-2.9.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.9.0 2026-04-16T23:40:15,262 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/6b/80/dfbdeb2a06952345e1a272f55eea07270f41c478be600056c0df5b0271d6/pirlygenes-2.10.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,263 Found link https://files.pythonhosted.org/packages/16/66/a9669f568842a86ec7b40ca9405cdefdafbd5835aebefa7f042f28db4735/pirlygenes-2.10.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.10.0 2026-04-16T23:40:15,263 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/fd/49/2f105db973d6a1c5529814f286d8e1a30d25f4ad3186069ad88a2b12de73/pirlygenes-2.11.0-py3-none-any.whl (from 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https://files.pythonhosted.org/packages/67/b0/e677f7b6539ab55102ac0e5c18865a79005426aec1b80cb9459654846d67/pirlygenes-3.26.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 3.26.0 2026-04-16T23:40:15,318 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/62/64/1a173931dd65b7c939fe8958dc8d46f762e67642d8e9985dafb0768695fb/pirlygenes-3.26.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,319 Found link https://files.pythonhosted.org/packages/34/42/bbc226d9de4b5c60e8b82c457178a69c9bc5b955e7b3544a8868b81ff987/pirlygenes-3.26.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 3.26.1 2026-04-16T23:40:15,319 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/7c/9c/c9f431181ffc9f4f47eac9845f1cb6b07954bbc0ae001b2e5207ce24b596/pirlygenes-3.26.2-py3-none-any.whl (from 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2026-04-16T23:40:15,325 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/a4/64/5e11a3a03ee52dce5d8482f1057e88bab0dd10ba937b9b52eeeab7e6e12c/pirlygenes-4.3.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,326 Found link https://files.pythonhosted.org/packages/4e/80/fe4ad52761b14e30a056a7aabffe97e3209d1ce6c0b6006f0468ac722958/pirlygenes-4.3.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 4.3.0 2026-04-16T23:40:15,327 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/26/85/68916b5439800a07f5849fbcd4a350a7cc71e07a8b76f0971895cc424ca2/pirlygenes-4.4.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,328 Found link https://files.pythonhosted.org/packages/df/9d/fb048260496a0cf27bc5be06dca4d279efd2591594f88b17f268f3ae16e1/pirlygenes-4.4.0.tar.gz (from 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https://files.pythonhosted.org/packages/f9/d0/e789a708cff87c7c486dcc1217d2b9e53b64eb042cf5aea82a3968df17fb/pirlygenes-4.5.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 4.5.0 2026-04-16T23:40:15,332 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/26/e9/ac77452d9ab6a48800ae3877c5ab33e236ebac0fdb88a93a5ff3ca46c74d/pirlygenes-4.5.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,333 Found link https://files.pythonhosted.org/packages/d3/b3/f05fc2a59b473c413cc5334e8d1e436ba54770343080f7fa94ff597c06d9/pirlygenes-4.5.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 4.5.1 2026-04-16T23:40:15,333 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/b1/b4/9f9d6dcf9b5febce74804207ebcda3f2ee5a6d49131e191f2ff795d4861a/pirlygenes-4.6.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,334 Found link https://files.pythonhosted.org/packages/68/2f/c3dbab2eaba78118dab71442ab9ac7be3143e2a3c17fb313275c805dc420/pirlygenes-4.6.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 4.6.0 2026-04-16T23:40:15,335 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/63/0b/47839a8876cfb067cbe138f9a24a201fbf19530dc2e8611df7b8ed04f4a6/pirlygenes-4.6.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,336 Found link https://files.pythonhosted.org/packages/48/5c/a153920e17d1d29654dfdf144c7499daa6faf1bf96eafd55381209980e4d/pirlygenes-4.6.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 4.6.1 2026-04-16T23:40:15,336 Skipping link: No binaries permitted for pirlygenes: 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2026-04-16T23:40:15,340 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/cb/e7/89d330771e297453fb6aba89694d230a132245877e3480641a53f393ef88/pirlygenes-4.6.5-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,341 Found link https://files.pythonhosted.org/packages/ee/55/71e863a929e308b3d96a2a5367325892de2459bab419b2079c46c9756bef/pirlygenes-4.6.5.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 4.6.5 2026-04-16T23:40:15,341 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/41/9b/7d9a9ec9fe07a2c74478ed4b8cbc15b829b18f509efccd98b53fb7c1a823/pirlygenes-4.7.3-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,342 Found link https://files.pythonhosted.org/packages/2b/9a/3af553746081f2870303a614d8e02ad5d2b496260865384bb1bcf12cedc1/pirlygenes-4.7.3.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 4.7.3 2026-04-16T23:40:15,342 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/40/9c/fd8dea65354cabbb886d199f43f8df49b30af09a12dd2ebbaf27c192e84a/pirlygenes-4.8.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,343 Found link https://files.pythonhosted.org/packages/5a/71/0d417232ea9fd0cc6d60ab3cf2374e81e853a8bb91c166a34ffea7748db0/pirlygenes-4.8.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 4.8.0 2026-04-16T23:40:15,344 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/98/29/2c9378ca5e031cf38e492815b5295acc8dac36b6c8b639de936e19ebd2e2/pirlygenes-4.8.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,345 Found link https://files.pythonhosted.org/packages/56/25/2f020e53c756bfdaca762e0dbaa5b59d22ec77e7395d0d06c28eb7521aad/pirlygenes-4.8.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 4.8.1 2026-04-16T23:40:15,346 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/10/7f/731b4f89448f41b2c2134145708f4f3d5c266b36f5644cb50ad1668c123a/pirlygenes-4.9.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,347 Found link https://files.pythonhosted.org/packages/34/37/566fc1256bb2b6ce726ced3b2e8fafd6a500e8dae0598d94179ef35b1cfd/pirlygenes-4.9.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 4.9.0 2026-04-16T23:40:15,348 Fetching project page and analyzing links: https://www.piwheels.org/simple/pirlygenes/ 2026-04-16T23:40:15,348 Getting page https://www.piwheels.org/simple/pirlygenes/ 2026-04-16T23:40:15,349 Found index url https://www.piwheels.org/simple 2026-04-16T23:40:15,610 Fetched page https://www.piwheels.org/simple/pirlygenes/ as text/html 2026-04-16T23:40:15,631 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-4.7.3-py3-none-any.whl#sha256=81c97686416e99bab5c2db66680f16bed7dcdcbb56398cd1ec96d35dc58129b4 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,632 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-4.6.5-py3-none-any.whl#sha256=d2fc82d70f50dfaa93078f7103fd4f36a40e887a82e202facd0bfeb4fd197d6b (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,632 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-4.6.4-py3-none-any.whl#sha256=072b63e0733fb159bd13897a522f1497ab594f479fb20fc392330adb3bfec700 (from 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Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-4.5.1-py3-none-any.whl#sha256=6eac35e29431bae18ccfa02d623bf1cf4fcec1922dd694a7a9a589b23e75570f (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,636 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-4.5.0-py3-none-any.whl#sha256=5bf0c849f33c69ab15cf67dac7e3dfac015b955b53f7e91d146fa99995045fe7 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,636 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-4.4.1-py3-none-any.whl#sha256=988334da13352e16c9e430e9468b1f0811864375c156820c87f88721084de79d (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,637 Skipping link: No binaries permitted for pirlygenes: 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https://www.piwheels.org/simple/pirlygenes/pirlygenes-4.1.0-py3-none-any.whl#sha256=76779f2537039054e63e2b8f18abadbb914465cfda5ab8b46f368fa6808243e3 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,639 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-4.0.0-py3-none-any.whl#sha256=bd5eff37ffb71ddda7768ff59e5e9eff913afc92525bfa4b4518c143a18c8878 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,639 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-3.26.2-py3-none-any.whl#sha256=d66b658e411e47ea09be90c21189c5a7a0a861c2c2053c5976d08de9c4a0a124 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,640 Skipping link: No binaries permitted for pirlygenes: 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https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.3.0-py3-none-any.whl#sha256=88bf981b5ba9b7fa0a46232499d049d3faafaf76e258e3d09e1b65ba9f97b22d (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,667 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.2.1-py3-none-any.whl#sha256=5327c129eaf178c76a60b5257dfe32546f0c09dd8881ddb296f458e11934ccf7 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,667 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.2.0-py3-none-any.whl#sha256=09718fb06f1ce838406a07641c7df1df1ff56ad9bcca5e70f0dabeabf18d9eb6 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,668 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.1.0-py3-none-any.whl#sha256=6e0978a40a4b6a16e6e44012574ac0838b0abf01a40770a2b4c8e7db2aa583a6 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,669 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.0.1-py3-none-any.whl#sha256=0956b5fd3f21d43dea90b38bbc06628b327c49504aa0fc53d3d81d55208c6f5f (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,669 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.0.0-py3-none-any.whl#sha256=de738501d014cdb6760b96e01afa7d18cb8dac3d863d433e9ce8fce0172641f5 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,670 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-1.9.0-py3-none-any.whl#sha256=3be90370a11cc9b33de80e02b84f99700133addc5994e35bcb8b80b76f09f8ae (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,670 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-1.8.1-py3-none-any.whl#sha256=35f8427ceac3714bb6339609b7f3602ea81ea8b5642c4e760931e9a28263a28b (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,670 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-1.8.0-py3-none-any.whl#sha256=202a232caf63d7ad6c6d202e8d8c6c3f52bb57aa7bd124b14be89597a4637f02 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,671 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-1.7.0-py3-none-any.whl#sha256=01a45cdf8948ae1d8a8034363ecd9357088d1df4c99ffb9370f8d68432ff4fa7 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-16T23:40:15,671 Skipping link: not a file: https://www.piwheels.org/simple/pirlygenes/ 2026-04-16T23:40:15,672 Skipping link: not a file: https://pypi.org/simple/pirlygenes/ 2026-04-16T23:40:15,702 Given no hashes to check 1 links for project 'pirlygenes': discarding no candidates 2026-04-16T23:40:15,721 Collecting pirlygenes==4.8.0 2026-04-16T23:40:15,724 Created temporary directory: /tmp/pip-unpack-2kx7ygpr 2026-04-16T23:40:15,958 Downloading pirlygenes-4.8.0.tar.gz (7.4 MB) 2026-04-16T23:40:18,038 Added pirlygenes==4.8.0 from https://files.pythonhosted.org/packages/5a/71/0d417232ea9fd0cc6d60ab3cf2374e81e853a8bb91c166a34ffea7748db0/pirlygenes-4.8.0.tar.gz to build tracker '/tmp/pip-build-tracker-xlupa_uh' 2026-04-16T23:40:18,044 Created temporary directory: /tmp/pip-build-env-pq77lk7c 2026-04-16T23:40:18,049 Installing build dependencies: started 2026-04-16T23:40:18,050 Running command pip subprocess to install build dependencies 2026-04-16T23:40:18,080 Error processing line 1 of /home/piwheels/.local/lib/python3.11/site-packages/outofcuda_hook.pth: 2026-04-16T23:40:18,119 Traceback (most recent call last): 2026-04-16T23:40:18,120 File "", line 192, in addpackage 2026-04-16T23:40:18,121 File "", line 1, in 2026-04-16T23:40:18,122 ModuleNotFoundError: No module named 'outofcuda' 2026-04-16T23:40:18,123 Remainder of file ignored 2026-04-16T23:40:19,183 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-04-16T23:40:19,593 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-16T23:40:19,616 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-16T23:40:21,434 Collecting setuptools>=60 2026-04-16T23:40:21,539 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-04-16T23:40:21,934 Collecting setuptools-scm>=8.0 2026-04-16T23:40:21,951 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl (21 kB) 2026-04-16T23:40:22,036 Collecting vcs-versioning>=1.0.0.dev0 2026-04-16T23:40:22,054 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl (79 kB) 2026-04-16T23:40:22,237 Collecting packaging>=20 2026-04-16T23:40:22,255 Using cached https://www.piwheels.org/simple/packaging/packaging-26.1-py3-none-any.whl (95 kB) 2026-04-16T23:40:25,280 Installing collected packages: setuptools, packaging, vcs-versioning, setuptools-scm 2026-04-16T23:40:28,852 Creating /tmp/pip-build-env-pq77lk7c/overlay/local/bin 2026-04-16T23:40:28,854 changing mode of /tmp/pip-build-env-pq77lk7c/overlay/local/bin/vcs-versioning to 755 2026-04-16T23:40:28,957 changing mode of /tmp/pip-build-env-pq77lk7c/overlay/local/bin/setuptools-scm to 755 2026-04-16T23:40:28,985 Successfully installed packaging-26.1 setuptools-82.0.1 setuptools-scm-10.0.5 vcs-versioning-1.1.1 2026-04-16T23:40:29,267 Installing build dependencies: finished with status 'done' 2026-04-16T23:40:29,282 Getting requirements to build wheel: started 2026-04-16T23:40:29,283 Running command Getting requirements to build wheel 2026-04-16T23:40:29,922 toml section missing PosixPath('pyproject.toml') does not contain any of the tool sections: ['setuptools_scm', 'vcs-versioning'] 2026-04-16T23:40:30,030 /tmp/pip-build-env-pq77lk7c/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-16T23:40:30,031 !! 2026-04-16T23:40:30,032 ******************************************************************************** 2026-04-16T23:40:30,033 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-16T23:40:30,034 License :: OSI Approved :: Apache Software License 2026-04-16T23:40:30,035 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-16T23:40:30,036 ******************************************************************************** 2026-04-16T23:40:30,037 !! 2026-04-16T23:40:30,038 dist._finalize_license_expression() 2026-04-16T23:40:30,038 /tmp/pip-build-env-pq77lk7c/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-16T23:40:30,039 !! 2026-04-16T23:40:30,040 ******************************************************************************** 2026-04-16T23:40:30,040 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-16T23:40:30,041 License :: OSI Approved :: Apache Software License 2026-04-16T23:40:30,043 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-16T23:40:30,043 ******************************************************************************** 2026-04-16T23:40:30,044 !! 2026-04-16T23:40:30,045 self._finalize_license_expression() 2026-04-16T23:40:30,046 running egg_info 2026-04-16T23:40:30,054 writing pirlygenes.egg-info/PKG-INFO 2026-04-16T23:40:30,060 writing dependency_links to pirlygenes.egg-info/dependency_links.txt 2026-04-16T23:40:30,062 writing entry points to pirlygenes.egg-info/entry_points.txt 2026-04-16T23:40:30,063 writing requirements to pirlygenes.egg-info/requires.txt 2026-04-16T23:40:30,065 writing top-level names to pirlygenes.egg-info/top_level.txt 2026-04-16T23:40:30,108 /tmp/pip-build-env-pq77lk7c/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-04-16T23:40:30,108 return get_active_overrides().subprocess_timeout 2026-04-16T23:40:30,115 listing git files failed - pretending there aren't any 2026-04-16T23:40:30,125 reading manifest file 'pirlygenes.egg-info/SOURCES.txt' 2026-04-16T23:40:30,136 adding license file 'LICENSE' 2026-04-16T23:40:30,143 writing manifest file 'pirlygenes.egg-info/SOURCES.txt' 2026-04-16T23:40:30,247 Getting requirements to build wheel: finished with status 'done' 2026-04-16T23:40:30,251 Created temporary directory: /tmp/pip-modern-metadata-dxqciw1w 2026-04-16T23:40:30,253 Preparing metadata (pyproject.toml): started 2026-04-16T23:40:30,255 Running command Preparing metadata (pyproject.toml) 2026-04-16T23:40:30,845 toml section missing PosixPath('pyproject.toml') does not contain any of the tool sections: ['setuptools_scm', 'vcs-versioning'] 2026-04-16T23:40:30,950 /tmp/pip-build-env-pq77lk7c/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-16T23:40:30,951 !! 2026-04-16T23:40:30,952 ******************************************************************************** 2026-04-16T23:40:30,952 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-16T23:40:30,954 License :: OSI Approved :: Apache Software License 2026-04-16T23:40:30,955 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-16T23:40:30,956 ******************************************************************************** 2026-04-16T23:40:30,957 !! 2026-04-16T23:40:30,958 dist._finalize_license_expression() 2026-04-16T23:40:30,958 /tmp/pip-build-env-pq77lk7c/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-16T23:40:30,959 !! 2026-04-16T23:40:30,960 ******************************************************************************** 2026-04-16T23:40:30,961 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-16T23:40:30,962 License :: OSI Approved :: Apache Software License 2026-04-16T23:40:30,963 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-16T23:40:30,964 ******************************************************************************** 2026-04-16T23:40:30,965 !! 2026-04-16T23:40:30,965 self._finalize_license_expression() 2026-04-16T23:40:30,966 running dist_info 2026-04-16T23:40:30,979 creating /tmp/pip-modern-metadata-dxqciw1w/pirlygenes.egg-info 2026-04-16T23:40:30,980 writing /tmp/pip-modern-metadata-dxqciw1w/pirlygenes.egg-info/PKG-INFO 2026-04-16T23:40:30,985 writing dependency_links to /tmp/pip-modern-metadata-dxqciw1w/pirlygenes.egg-info/dependency_links.txt 2026-04-16T23:40:30,987 writing entry points to /tmp/pip-modern-metadata-dxqciw1w/pirlygenes.egg-info/entry_points.txt 2026-04-16T23:40:30,989 writing requirements to /tmp/pip-modern-metadata-dxqciw1w/pirlygenes.egg-info/requires.txt 2026-04-16T23:40:30,990 writing top-level names to /tmp/pip-modern-metadata-dxqciw1w/pirlygenes.egg-info/top_level.txt 2026-04-16T23:40:30,992 writing manifest file '/tmp/pip-modern-metadata-dxqciw1w/pirlygenes.egg-info/SOURCES.txt' 2026-04-16T23:40:31,030 /tmp/pip-build-env-pq77lk7c/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-04-16T23:40:31,031 return get_active_overrides().subprocess_timeout 2026-04-16T23:40:31,038 listing git files failed - pretending there aren't any 2026-04-16T23:40:31,046 reading manifest file '/tmp/pip-modern-metadata-dxqciw1w/pirlygenes.egg-info/SOURCES.txt' 2026-04-16T23:40:31,048 adding license file 'LICENSE' 2026-04-16T23:40:31,052 writing manifest file '/tmp/pip-modern-metadata-dxqciw1w/pirlygenes.egg-info/SOURCES.txt' 2026-04-16T23:40:31,053 creating '/tmp/pip-modern-metadata-dxqciw1w/pirlygenes-4.8.0.dist-info' 2026-04-16T23:40:31,189 Preparing metadata (pyproject.toml): finished with status 'done' 2026-04-16T23:40:31,196 Source in /tmp/pip-wheel-atafd8_i/pirlygenes_6971419a077f4013a527141474dd7b90 has version 4.8.0, which satisfies requirement pirlygenes==4.8.0 from https://files.pythonhosted.org/packages/5a/71/0d417232ea9fd0cc6d60ab3cf2374e81e853a8bb91c166a34ffea7748db0/pirlygenes-4.8.0.tar.gz 2026-04-16T23:40:31,197 Removed pirlygenes==4.8.0 from https://files.pythonhosted.org/packages/5a/71/0d417232ea9fd0cc6d60ab3cf2374e81e853a8bb91c166a34ffea7748db0/pirlygenes-4.8.0.tar.gz from build tracker '/tmp/pip-build-tracker-xlupa_uh' 2026-04-16T23:40:31,206 Created temporary directory: /tmp/pip-unpack-zxfrsvxt 2026-04-16T23:40:31,206 Building wheels for collected packages: pirlygenes 2026-04-16T23:40:31,210 Created temporary directory: /tmp/pip-wheel-fp7gmtr9 2026-04-16T23:40:31,211 Destination directory: /tmp/pip-wheel-fp7gmtr9 2026-04-16T23:40:31,213 Building wheel for pirlygenes (pyproject.toml): started 2026-04-16T23:40:31,214 Running command Building wheel for pirlygenes (pyproject.toml) 2026-04-16T23:40:31,799 toml section missing PosixPath('pyproject.toml') does not contain any of the tool sections: ['setuptools_scm', 'vcs-versioning'] 2026-04-16T23:40:31,899 /tmp/pip-build-env-pq77lk7c/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-16T23:40:31,900 !! 2026-04-16T23:40:31,901 ******************************************************************************** 2026-04-16T23:40:31,902 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-16T23:40:31,903 License :: OSI Approved :: Apache Software License 2026-04-16T23:40:31,905 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-16T23:40:31,906 ******************************************************************************** 2026-04-16T23:40:31,907 !! 2026-04-16T23:40:31,908 dist._finalize_license_expression() 2026-04-16T23:40:31,908 /tmp/pip-build-env-pq77lk7c/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-16T23:40:31,909 !! 2026-04-16T23:40:31,910 ******************************************************************************** 2026-04-16T23:40:31,910 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-16T23:40:31,911 License :: OSI Approved :: Apache Software License 2026-04-16T23:40:31,913 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-16T23:40:31,913 ******************************************************************************** 2026-04-16T23:40:31,914 !! 2026-04-16T23:40:31,915 self._finalize_license_expression() 2026-04-16T23:40:31,915 running bdist_wheel 2026-04-16T23:40:31,934 running build 2026-04-16T23:40:31,934 running build_py 2026-04-16T23:40:31,936 creating build/lib/pirlygenes 2026-04-16T23:40:31,938 copying pirlygenes/__init__.py -> build/lib/pirlygenes 2026-04-16T23:40:31,940 copying pirlygenes/load_dataset.py -> build/lib/pirlygenes 2026-04-16T23:40:31,942 copying pirlygenes/version.py -> build/lib/pirlygenes 2026-04-16T23:40:31,944 copying pirlygenes/plot_strip.py -> build/lib/pirlygenes 2026-04-16T23:40:31,947 copying pirlygenes/sample_context.py -> build/lib/pirlygenes 2026-04-16T23:40:31,950 copying pirlygenes/gene_names.py -> build/lib/pirlygenes 2026-04-16T23:40:31,951 copying pirlygenes/plot_therapy.py -> build/lib/pirlygenes 2026-04-16T23:40:31,954 copying pirlygenes/sample_quality.py -> build/lib/pirlygenes 2026-04-16T23:40:31,957 copying pirlygenes/plot_embedding.py -> build/lib/pirlygenes 2026-04-16T23:40:31,960 copying pirlygenes/plot_target_deep_dive.py -> build/lib/pirlygenes 2026-04-16T23:40:31,963 copying pirlygenes/plot_subtype_signature.py -> build/lib/pirlygenes 2026-04-16T23:40:31,965 copying pirlygenes/plot_tumor_expr.py -> build/lib/pirlygenes 2026-04-16T23:40:31,968 copying pirlygenes/load_expression.py -> build/lib/pirlygenes 2026-04-16T23:40:31,971 copying pirlygenes/transcript_to_gene.py -> build/lib/pirlygenes 2026-04-16T23:40:31,973 copying pirlygenes/tumor_purity.py -> build/lib/pirlygenes 2026-04-16T23:40:31,977 copying pirlygenes/plot_data_helpers.py -> build/lib/pirlygenes 2026-04-16T23:40:31,979 copying pirlygenes/gene_sets_cancer.py -> build/lib/pirlygenes 2026-04-16T23:40:31,983 copying pirlygenes/cli.py -> build/lib/pirlygenes 2026-04-16T23:40:31,988 copying pirlygenes/aggregate_gene_expression.py -> build/lib/pirlygenes 2026-04-16T23:40:31,990 copying pirlygenes/plot.py -> build/lib/pirlygenes 2026-04-16T23:40:31,992 copying pirlygenes/gene_ids.py -> build/lib/pirlygenes 2026-04-16T23:40:31,994 copying pirlygenes/common.py -> build/lib/pirlygenes 2026-04-16T23:40:31,997 copying pirlygenes/plot_scatter.py -> build/lib/pirlygenes 2026-04-16T23:40:31,999 copying pirlygenes/therapy_response.py -> build/lib/pirlygenes 2026-04-16T23:40:32,001 running egg_info 2026-04-16T23:40:32,016 writing pirlygenes.egg-info/PKG-INFO 2026-04-16T23:40:32,021 writing dependency_links to pirlygenes.egg-info/dependency_links.txt 2026-04-16T23:40:32,023 writing entry points to pirlygenes.egg-info/entry_points.txt 2026-04-16T23:40:32,025 writing requirements to pirlygenes.egg-info/requires.txt 2026-04-16T23:40:32,026 writing top-level names to pirlygenes.egg-info/top_level.txt 2026-04-16T23:40:32,057 /tmp/pip-build-env-pq77lk7c/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-04-16T23:40:32,057 return get_active_overrides().subprocess_timeout 2026-04-16T23:40:32,063 listing git files failed - pretending there aren't any 2026-04-16T23:40:32,071 reading manifest file 'pirlygenes.egg-info/SOURCES.txt' 2026-04-16T23:40:32,079 adding license file 'LICENSE' 2026-04-16T23:40:32,086 writing manifest file 'pirlygenes.egg-info/SOURCES.txt' 2026-04-16T23:40:32,089 /tmp/pip-build-env-pq77lk7c/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'pirlygenes.data' is absent from the `packages` configuration. 2026-04-16T23:40:32,090 !! 2026-04-16T23:40:32,091 ******************************************************************************** 2026-04-16T23:40:32,092 ############################ 2026-04-16T23:40:32,092 # Package would be ignored # 2026-04-16T23:40:32,093 ############################ 2026-04-16T23:40:32,093 Python recognizes 'pirlygenes.data' as an importable package[^1], 2026-04-16T23:40:32,094 but it is absent from setuptools' `packages` configuration. 2026-04-16T23:40:32,095 This leads to an ambiguous overall configuration. If you want to distribute this 2026-04-16T23:40:32,096 package, please make sure that 'pirlygenes.data' is explicitly added 2026-04-16T23:40:32,097 to the `packages` configuration field. 2026-04-16T23:40:32,098 Alternatively, you can also rely on setuptools' discovery methods 2026-04-16T23:40:32,099 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-04-16T23:40:32,099 instead of `find_packages(...)`/`find:`). 2026-04-16T23:40:32,100 You can read more about "package discovery" on setuptools documentation page: 2026-04-16T23:40:32,101 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-04-16T23:40:32,102 If you don't want 'pirlygenes.data' to be distributed and are 2026-04-16T23:40:32,103 already explicitly excluding 'pirlygenes.data' via 2026-04-16T23:40:32,103 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-04-16T23:40:32,104 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-04-16T23:40:32,105 combination with a more fine grained `package-data` configuration. 2026-04-16T23:40:32,106 You can read more about "package data files" on setuptools documentation page: 2026-04-16T23:40:32,107 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-04-16T23:40:32,108 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-04-16T23:40:32,109 even if it does not contain any `.py` files. 2026-04-16T23:40:32,109 On the other hand, currently there is no concept of package data 2026-04-16T23:40:32,110 directory, all directories are treated like packages. 2026-04-16T23:40:32,110 ******************************************************************************** 2026-04-16T23:40:32,111 !! 2026-04-16T23:40:32,112 check.warn(importable) 2026-04-16T23:40:32,112 /tmp/pip-build-env-pq77lk7c/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'pirlygenes.decomposition' is absent from the `packages` configuration. 2026-04-16T23:40:32,113 !! 2026-04-16T23:40:32,114 ******************************************************************************** 2026-04-16T23:40:32,114 ############################ 2026-04-16T23:40:32,115 # Package would be ignored # 2026-04-16T23:40:32,115 ############################ 2026-04-16T23:40:32,116 Python recognizes 'pirlygenes.decomposition' as an importable package[^1], 2026-04-16T23:40:32,116 but it is absent from setuptools' `packages` configuration. 2026-04-16T23:40:32,117 This leads to an ambiguous overall configuration. If you want to distribute this 2026-04-16T23:40:32,118 package, please make sure that 'pirlygenes.decomposition' is explicitly added 2026-04-16T23:40:32,118 to the `packages` configuration field. 2026-04-16T23:40:32,119 Alternatively, you can also rely on setuptools' discovery methods 2026-04-16T23:40:32,120 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-04-16T23:40:32,120 instead of `find_packages(...)`/`find:`). 2026-04-16T23:40:32,122 You can read more about "package discovery" on setuptools documentation page: 2026-04-16T23:40:32,123 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-04-16T23:40:32,124 If you don't want 'pirlygenes.decomposition' to be distributed and are 2026-04-16T23:40:32,124 already explicitly excluding 'pirlygenes.decomposition' via 2026-04-16T23:40:32,125 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-04-16T23:40:32,125 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-04-16T23:40:32,126 combination with a more fine grained `package-data` configuration. 2026-04-16T23:40:32,127 You can read more about "package data files" on setuptools documentation page: 2026-04-16T23:40:32,128 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-04-16T23:40:32,129 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-04-16T23:40:32,130 even if it does not contain any `.py` files. 2026-04-16T23:40:32,130 On the other hand, currently there is no concept of package data 2026-04-16T23:40:32,131 directory, all directories are treated like packages. 2026-04-16T23:40:32,131 ******************************************************************************** 2026-04-16T23:40:32,132 !! 2026-04-16T23:40:32,132 check.warn(importable) 2026-04-16T23:40:32,133 copying pirlygenes/PLAN-1.4.0-radioligand.md -> build/lib/pirlygenes 2026-04-16T23:40:32,133 creating build/lib/pirlygenes/data 2026-04-16T23:40:32,134 copying pirlygenes/data/ADC-approved.csv -> build/lib/pirlygenes/data 2026-04-16T23:40:32,134 copying pirlygenes/data/ADC-trials.csv -> build/lib/pirlygenes/data 2026-04-16T23:40:32,134 copying pirlygenes/data/ADC-withdrawn.csv -> build/lib/pirlygenes/data 2026-04-16T23:40:32,135 copying pirlygenes/data/CAR-T-approved.csv -> build/lib/pirlygenes/data 2026-04-16T23:40:32,135 copying pirlygenes/data/TCR-T-approved.csv -> build/lib/pirlygenes/data 2026-04-16T23:40:32,136 copying pirlygenes/data/TCR-T-trials.csv -> build/lib/pirlygenes/data 2026-04-16T23:40:32,136 copying pirlygenes/data/bispecific-antibodies-approved.csv -> build/lib/pirlygenes/data 2026-04-16T23:40:32,137 copying pirlygenes/data/cancer-driver-genes.csv -> build/lib/pirlygenes/data 2026-04-16T23:40:32,137 copying pirlygenes/data/cancer-driver-variants.csv -> build/lib/pirlygenes/data 2026-04-16T23:40:32,138 copying pirlygenes/data/cancer-family-panels.csv -> build/lib/pirlygenes/data 2026-04-16T23:40:32,138 copying pirlygenes/data/cancer-surfaceome.csv -> build/lib/pirlygenes/data 2026-04-16T23:40:32,139 copying pirlygenes/data/cancer-testis-antigens.csv -> build/lib/pirlygenes/data 2026-04-16T23:40:32,139 copying pirlygenes/data/cancer-type-genes.csv -> build/lib/pirlygenes/data 2026-04-16T23:40:32,141 copying pirlygenes/data/culture-stress-genes.csv -> build/lib/pirlygenes/data 2026-04-16T23:40:32,143 copying pirlygenes/data/degradation-gene-pairs.csv -> build/lib/pirlygenes/data 2026-04-16T23:40:32,145 copying pirlygenes/data/ensembl-id-aliases.csv -> build/lib/pirlygenes/data 2026-04-16T23:40:32,148 copying pirlygenes/data/estimate-signatures.csv -> build/lib/pirlygenes/data 2026-04-16T23:40:32,150 copying pirlygenes/data/extra-tx-mappings.csv -> build/lib/pirlygenes/data 2026-04-16T23:40:32,153 copying pirlygenes/data/ffpe-sensitive-markers.csv -> build/lib/pirlygenes/data 2026-04-16T23:40:32,155 copying pirlygenes/data/gene-sets.csv -> build/lib/pirlygenes/data 2026-04-16T23:40:32,158 copying pirlygenes/data/housekeeping-genes.csv -> build/lib/pirlygenes/data 2026-04-16T23:40:32,160 copying pirlygenes/data/hpa-cell-type-expression.csv -> build/lib/pirlygenes/data 2026-04-16T23:40:32,277 copying pirlygenes/data/lineage-genes.csv -> build/lib/pirlygenes/data 2026-04-16T23:40:32,279 copying pirlygenes/data/mitochondrial-genes.csv -> build/lib/pirlygenes/data 2026-04-16T23:40:32,281 copying pirlygenes/data/multispecific-tcell-engager-trials.csv -> build/lib/pirlygenes/data 2026-04-16T23:40:32,284 copying pirlygenes/data/pan-cancer-expression.csv -> build/lib/pirlygenes/data 2026-04-16T23:40:32,451 copying pirlygenes/data/radioligand-targets.csv -> build/lib/pirlygenes/data 2026-04-16T23:40:32,453 copying pirlygenes/data/surface-proteins.csv -> build/lib/pirlygenes/data 2026-04-16T23:40:32,461 copying pirlygenes/data/therapy-response-signatures.csv -> build/lib/pirlygenes/data 2026-04-16T23:40:32,464 copying pirlygenes/data/tme-markers.csv -> build/lib/pirlygenes/data 2026-04-16T23:40:32,467 creating build/lib/pirlygenes/decomposition 2026-04-16T23:40:32,468 copying pirlygenes/decomposition/__init__.py -> build/lib/pirlygenes/decomposition 2026-04-16T23:40:32,470 copying pirlygenes/decomposition/engine.py -> build/lib/pirlygenes/decomposition 2026-04-16T23:40:32,473 copying pirlygenes/decomposition/panels.py -> build/lib/pirlygenes/decomposition 2026-04-16T23:40:32,476 copying pirlygenes/decomposition/plot.py -> build/lib/pirlygenes/decomposition 2026-04-16T23:40:32,479 copying pirlygenes/decomposition/signature.py -> build/lib/pirlygenes/decomposition 2026-04-16T23:40:32,481 copying pirlygenes/decomposition/templates.py -> build/lib/pirlygenes/decomposition 2026-04-16T23:40:32,498 installing to build/bdist.linux-armv7l/wheel 2026-04-16T23:40:32,498 running install 2026-04-16T23:40:32,521 running install_lib 2026-04-16T23:40:32,528 creating build/bdist.linux-armv7l/wheel 2026-04-16T23:40:32,531 creating build/bdist.linux-armv7l/wheel/pirlygenes 2026-04-16T23:40:32,532 copying build/lib/pirlygenes/__init__.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-16T23:40:32,534 copying build/lib/pirlygenes/load_dataset.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-16T23:40:32,535 copying build/lib/pirlygenes/version.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-16T23:40:32,537 copying build/lib/pirlygenes/plot_strip.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-16T23:40:32,539 copying build/lib/pirlygenes/sample_context.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-16T23:40:32,542 copying build/lib/pirlygenes/gene_names.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-16T23:40:32,544 copying build/lib/pirlygenes/plot_therapy.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-16T23:40:32,547 copying build/lib/pirlygenes/sample_quality.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-16T23:40:32,549 copying build/lib/pirlygenes/PLAN-1.4.0-radioligand.md -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-16T23:40:32,551 copying build/lib/pirlygenes/plot_embedding.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-16T23:40:32,554 copying build/lib/pirlygenes/plot_target_deep_dive.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-16T23:40:32,556 copying build/lib/pirlygenes/plot_subtype_signature.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-16T23:40:32,559 creating build/bdist.linux-armv7l/wheel/pirlygenes/data 2026-04-16T23:40:32,560 copying build/lib/pirlygenes/data/gene-sets.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-16T23:40:32,563 copying build/lib/pirlygenes/data/hpa-cell-type-expression.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-16T23:40:32,688 copying build/lib/pirlygenes/data/cancer-testis-antigens.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-16T23:40:32,691 copying build/lib/pirlygenes/data/ADC-trials.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-16T23:40:32,694 copying build/lib/pirlygenes/data/bispecific-antibodies-approved.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-16T23:40:32,697 copying build/lib/pirlygenes/data/ffpe-sensitive-markers.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-16T23:40:32,698 copying build/lib/pirlygenes/data/mitochondrial-genes.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-16T23:40:32,700 copying build/lib/pirlygenes/data/radioligand-targets.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-16T23:40:32,702 copying build/lib/pirlygenes/data/extra-tx-mappings.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-16T23:40:32,705 copying build/lib/pirlygenes/data/surface-proteins.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-16T23:40:32,712 copying build/lib/pirlygenes/data/CAR-T-approved.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-16T23:40:32,714 copying build/lib/pirlygenes/data/cancer-family-panels.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-16T23:40:32,716 copying build/lib/pirlygenes/data/cancer-type-genes.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-16T23:40:32,718 copying build/lib/pirlygenes/data/lineage-genes.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-16T23:40:32,720 copying build/lib/pirlygenes/data/TCR-T-approved.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-16T23:40:32,722 copying build/lib/pirlygenes/data/tme-markers.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-16T23:40:32,724 copying build/lib/pirlygenes/data/ensembl-id-aliases.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-16T23:40:32,727 copying build/lib/pirlygenes/data/degradation-gene-pairs.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-16T23:40:32,728 copying build/lib/pirlygenes/data/ADC-approved.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-16T23:40:32,730 copying build/lib/pirlygenes/data/cancer-driver-genes.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-16T23:40:32,733 copying build/lib/pirlygenes/data/culture-stress-genes.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-16T23:40:32,735 copying build/lib/pirlygenes/data/ADC-withdrawn.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-16T23:40:32,737 copying build/lib/pirlygenes/data/multispecific-tcell-engager-trials.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-16T23:40:32,739 copying build/lib/pirlygenes/data/TCR-T-trials.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-16T23:40:32,741 copying build/lib/pirlygenes/data/estimate-signatures.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-16T23:40:32,744 copying build/lib/pirlygenes/data/cancer-driver-variants.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-16T23:40:32,747 copying build/lib/pirlygenes/data/housekeeping-genes.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-16T23:40:32,749 copying build/lib/pirlygenes/data/therapy-response-signatures.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-16T23:40:32,751 copying build/lib/pirlygenes/data/pan-cancer-expression.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-16T23:40:32,918 copying build/lib/pirlygenes/data/cancer-surfaceome.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-16T23:40:32,920 copying build/lib/pirlygenes/plot_tumor_expr.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-16T23:40:32,924 copying build/lib/pirlygenes/load_expression.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-16T23:40:32,926 copying build/lib/pirlygenes/transcript_to_gene.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-16T23:40:32,928 copying build/lib/pirlygenes/tumor_purity.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-16T23:40:32,932 copying build/lib/pirlygenes/plot_data_helpers.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-16T23:40:32,934 copying build/lib/pirlygenes/gene_sets_cancer.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-16T23:40:32,937 copying build/lib/pirlygenes/cli.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-16T23:40:32,941 copying build/lib/pirlygenes/aggregate_gene_expression.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-16T23:40:32,944 copying build/lib/pirlygenes/plot.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-16T23:40:32,946 copying build/lib/pirlygenes/gene_ids.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-16T23:40:32,948 copying build/lib/pirlygenes/common.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-16T23:40:32,950 copying build/lib/pirlygenes/plot_scatter.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-16T23:40:32,953 copying build/lib/pirlygenes/therapy_response.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-16T23:40:32,955 creating build/bdist.linux-armv7l/wheel/pirlygenes/decomposition 2026-04-16T23:40:32,956 copying build/lib/pirlygenes/decomposition/panels.py -> build/bdist.linux-armv7l/wheel/./pirlygenes/decomposition 2026-04-16T23:40:32,959 copying build/lib/pirlygenes/decomposition/__init__.py -> build/bdist.linux-armv7l/wheel/./pirlygenes/decomposition 2026-04-16T23:40:32,961 copying build/lib/pirlygenes/decomposition/templates.py -> build/bdist.linux-armv7l/wheel/./pirlygenes/decomposition 2026-04-16T23:40:32,963 copying build/lib/pirlygenes/decomposition/engine.py -> build/bdist.linux-armv7l/wheel/./pirlygenes/decomposition 2026-04-16T23:40:32,966 copying build/lib/pirlygenes/decomposition/signature.py -> build/bdist.linux-armv7l/wheel/./pirlygenes/decomposition 2026-04-16T23:40:32,968 copying build/lib/pirlygenes/decomposition/plot.py -> build/bdist.linux-armv7l/wheel/./pirlygenes/decomposition 2026-04-16T23:40:32,970 running install_egg_info 2026-04-16T23:40:32,977 Copying pirlygenes.egg-info to build/bdist.linux-armv7l/wheel/./pirlygenes-4.8.0-py3.11.egg-info 2026-04-16T23:40:32,989 running install_scripts 2026-04-16T23:40:33,001 creating build/bdist.linux-armv7l/wheel/pirlygenes-4.8.0.dist-info/WHEEL 2026-04-16T23:40:33,004 creating '/tmp/pip-wheel-fp7gmtr9/.tmp-hxdwvket/pirlygenes-4.8.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-04-16T23:40:33,007 adding 'pirlygenes/PLAN-1.4.0-radioligand.md' 2026-04-16T23:40:33,008 adding 'pirlygenes/__init__.py' 2026-04-16T23:40:33,010 adding 'pirlygenes/aggregate_gene_expression.py' 2026-04-16T23:40:33,027 adding 'pirlygenes/cli.py' 2026-04-16T23:40:33,030 adding 'pirlygenes/common.py' 2026-04-16T23:40:33,031 adding 'pirlygenes/gene_ids.py' 2026-04-16T23:40:33,033 adding 'pirlygenes/gene_names.py' 2026-04-16T23:40:33,038 adding 'pirlygenes/gene_sets_cancer.py' 2026-04-16T23:40:33,040 adding 'pirlygenes/load_dataset.py' 2026-04-16T23:40:33,045 adding 'pirlygenes/load_expression.py' 2026-04-16T23:40:33,046 adding 'pirlygenes/plot.py' 2026-04-16T23:40:33,049 adding 'pirlygenes/plot_data_helpers.py' 2026-04-16T23:40:33,056 adding 'pirlygenes/plot_embedding.py' 2026-04-16T23:40:33,059 adding 'pirlygenes/plot_scatter.py' 2026-04-16T23:40:33,061 adding 'pirlygenes/plot_strip.py' 2026-04-16T23:40:33,063 adding 'pirlygenes/plot_subtype_signature.py' 2026-04-16T23:40:33,066 adding 'pirlygenes/plot_target_deep_dive.py' 2026-04-16T23:40:33,071 adding 'pirlygenes/plot_therapy.py' 2026-04-16T23:40:33,078 adding 'pirlygenes/plot_tumor_expr.py' 2026-04-16T23:40:33,084 adding 'pirlygenes/sample_context.py' 2026-04-16T23:40:33,087 adding 'pirlygenes/sample_quality.py' 2026-04-16T23:40:33,089 adding 'pirlygenes/therapy_response.py' 2026-04-16T23:40:33,091 adding 'pirlygenes/transcript_to_gene.py' 2026-04-16T23:40:33,101 adding 'pirlygenes/tumor_purity.py' 2026-04-16T23:40:33,102 adding 'pirlygenes/version.py' 2026-04-16T23:40:33,105 adding 'pirlygenes/data/ADC-approved.csv' 2026-04-16T23:40:33,109 adding 'pirlygenes/data/ADC-trials.csv' 2026-04-16T23:40:33,110 adding 'pirlygenes/data/ADC-withdrawn.csv' 2026-04-16T23:40:33,112 adding 'pirlygenes/data/CAR-T-approved.csv' 2026-04-16T23:40:33,113 adding 'pirlygenes/data/TCR-T-approved.csv' 2026-04-16T23:40:33,116 adding 'pirlygenes/data/TCR-T-trials.csv' 2026-04-16T23:40:33,118 adding 'pirlygenes/data/bispecific-antibodies-approved.csv' 2026-04-16T23:40:33,123 adding 'pirlygenes/data/cancer-driver-genes.csv' 2026-04-16T23:40:33,125 adding 'pirlygenes/data/cancer-driver-variants.csv' 2026-04-16T23:40:33,127 adding 'pirlygenes/data/cancer-family-panels.csv' 2026-04-16T23:40:33,128 adding 'pirlygenes/data/cancer-surfaceome.csv' 2026-04-16T23:40:33,134 adding 'pirlygenes/data/cancer-testis-antigens.csv' 2026-04-16T23:40:33,137 adding 'pirlygenes/data/cancer-type-genes.csv' 2026-04-16T23:40:33,138 adding 'pirlygenes/data/culture-stress-genes.csv' 2026-04-16T23:40:33,140 adding 'pirlygenes/data/degradation-gene-pairs.csv' 2026-04-16T23:40:33,142 adding 'pirlygenes/data/ensembl-id-aliases.csv' 2026-04-16T23:40:33,144 adding 'pirlygenes/data/estimate-signatures.csv' 2026-04-16T23:40:33,145 adding 'pirlygenes/data/extra-tx-mappings.csv' 2026-04-16T23:40:33,147 adding 'pirlygenes/data/ffpe-sensitive-markers.csv' 2026-04-16T23:40:33,148 adding 'pirlygenes/data/gene-sets.csv' 2026-04-16T23:40:33,149 adding 'pirlygenes/data/housekeeping-genes.csv' 2026-04-16T23:40:35,834 adding 'pirlygenes/data/hpa-cell-type-expression.csv' 2026-04-16T23:40:35,883 adding 'pirlygenes/data/lineage-genes.csv' 2026-04-16T23:40:35,884 adding 'pirlygenes/data/mitochondrial-genes.csv' 2026-04-16T23:40:35,886 adding 'pirlygenes/data/multispecific-tcell-engager-trials.csv' 2026-04-16T23:40:39,054 adding 'pirlygenes/data/pan-cancer-expression.csv' 2026-04-16T23:40:39,127 adding 'pirlygenes/data/radioligand-targets.csv' 2026-04-16T23:40:39,150 adding 'pirlygenes/data/surface-proteins.csv' 2026-04-16T23:40:39,154 adding 'pirlygenes/data/therapy-response-signatures.csv' 2026-04-16T23:40:39,156 adding 'pirlygenes/data/tme-markers.csv' 2026-04-16T23:40:39,157 adding 'pirlygenes/decomposition/__init__.py' 2026-04-16T23:40:39,163 adding 'pirlygenes/decomposition/engine.py' 2026-04-16T23:40:39,166 adding 'pirlygenes/decomposition/panels.py' 2026-04-16T23:40:39,169 adding 'pirlygenes/decomposition/plot.py' 2026-04-16T23:40:39,171 adding 'pirlygenes/decomposition/signature.py' 2026-04-16T23:40:39,174 adding 'pirlygenes/decomposition/templates.py' 2026-04-16T23:40:39,177 adding 'pirlygenes-4.8.0.dist-info/licenses/LICENSE' 2026-04-16T23:40:39,183 adding 'pirlygenes-4.8.0.dist-info/METADATA' 2026-04-16T23:40:39,185 adding 'pirlygenes-4.8.0.dist-info/WHEEL' 2026-04-16T23:40:39,186 adding 'pirlygenes-4.8.0.dist-info/entry_points.txt' 2026-04-16T23:40:39,187 adding 'pirlygenes-4.8.0.dist-info/top_level.txt' 2026-04-16T23:40:39,189 adding 'pirlygenes-4.8.0.dist-info/RECORD' 2026-04-16T23:40:39,269 removing build/bdist.linux-armv7l/wheel 2026-04-16T23:40:39,398 Building wheel for pirlygenes (pyproject.toml): finished with status 'done' 2026-04-16T23:40:39,543 Created wheel for pirlygenes: filename=pirlygenes-4.8.0-py3-none-any.whl size=6738023 sha256=60c51a8b4c62cde1f14d4673140ba1a2e5cf32b3a6a2b726f4a2913bc77f2294 2026-04-16T23:40:39,544 Stored in directory: /tmp/pip-ephem-wheel-cache-_ijgdu65/wheels/26/55/3a/abc1a68424a49e15cd2d9300e7604cdaa3c71fc3193787ae03 2026-04-16T23:40:39,565 Successfully built pirlygenes 2026-04-16T23:40:39,743 Removed build tracker: '/tmp/pip-build-tracker-xlupa_uh'