2026-04-19T18:55:11,937 Created temporary directory: /tmp/pip-ephem-wheel-cache-4o4d7ufu 2026-04-19T18:55:11,939 Created temporary directory: /tmp/pip-build-tracker-mb310s7s 2026-04-19T18:55:11,939 Initialized build tracking at /tmp/pip-build-tracker-mb310s7s 2026-04-19T18:55:11,940 Created build tracker: /tmp/pip-build-tracker-mb310s7s 2026-04-19T18:55:11,940 Entered build tracker: /tmp/pip-build-tracker-mb310s7s 2026-04-19T18:55:11,941 Created temporary directory: /tmp/pip-wheel-ipzjt2s5 2026-04-19T18:55:11,944 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-19T18:55:11,946 Created temporary directory: /tmp/pip-ephem-wheel-cache-xm1p18eb 2026-04-19T18:55:11,968 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-19T18:55:11,971 2 location(s) to search for versions of pirlygenes: 2026-04-19T18:55:11,971 * https://pypi.org/simple/pirlygenes/ 2026-04-19T18:55:11,971 * https://www.piwheels.org/simple/pirlygenes/ 2026-04-19T18:55:11,972 Fetching project page and analyzing links: https://pypi.org/simple/pirlygenes/ 2026-04-19T18:55:11,973 Getting page https://pypi.org/simple/pirlygenes/ 2026-04-19T18:55:11,974 Found index url https://pypi.org/simple 2026-04-19T18:55:12,145 Fetched page https://pypi.org/simple/pirlygenes/ as application/vnd.pypi.simple.v1+json 2026-04-19T18:55:12,184 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/2e/66/a994711ece0c32dc4037b2c20acb069375f8eb2c80bdcca3a9efa47fdaee/pirlygenes-1.7.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,185 Found link https://files.pythonhosted.org/packages/17/fe/bcdacc3535105e4aed789ffd67937b0a725f5eaf16e19e2d70d7d9994985/pirlygenes-1.7.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 1.7.0 2026-04-19T18:55:12,186 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/59/b0/3e2df98a4c7e570e430d5a43b78c4325669dc94f670df919535730ad97e4/pirlygenes-1.8.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,187 Found link https://files.pythonhosted.org/packages/4b/7c/57808dd823cb43e0775fef54e28607a61d6e34549ef6c21f02e85567e13a/pirlygenes-1.8.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 1.8.0 2026-04-19T18:55:12,188 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/9a/8d/f18f1d145c3cc415d28137493c5cb8e758516d9ac9633fc74cb4f86a318a/pirlygenes-1.8.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,189 Found link https://files.pythonhosted.org/packages/61/0c/c3f0aff27c3758ba3f3ee1f4a63a05238e02043251af230032d9ba555624/pirlygenes-1.8.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 1.8.1 2026-04-19T18:55:12,190 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/24/35/2c1111a823202625bf5719038d745faaa60ed3613bc790db7a365d0d9e91/pirlygenes-1.9.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,191 Found link https://files.pythonhosted.org/packages/00/21/33762d0e1497cb8f52920f8804591991b077145275a9bb472d54cb34bd3b/pirlygenes-1.9.0.tar.gz (from 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https://files.pythonhosted.org/packages/f0/57/519f98c3e3ce7414973c34a35b56e0123e63c2397c1c28a40f52096110e8/pirlygenes-2.0.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.0.1 2026-04-19T18:55:12,195 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/b2/a5/eb85bc710dc92ed90930681df0d0727ba7c8adce5f597218b60c8e749abb/pirlygenes-2.1.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,196 Found link https://files.pythonhosted.org/packages/ac/1c/535ab059a16f501c104975a9afdbe26292625c5f6b4565dfaff29827dae5/pirlygenes-2.1.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.1.0 2026-04-19T18:55:12,196 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/31/67/9fb299b51b80ea11807d6cca24343e9b5bcd4f343f5590f443f4ab27d256/pirlygenes-2.2.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,197 Found link https://files.pythonhosted.org/packages/de/bc/dcd2f53a5eb6548d7c18e70463efb3f452b5d8baacde0faf0c91fe00ce06/pirlygenes-2.2.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.2.0 2026-04-19T18:55:12,198 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/4d/d7/cc21525563dbe1ac4f165f25a3e301a8a8547316b959381b70653d000f17/pirlygenes-2.2.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,199 Found link https://files.pythonhosted.org/packages/1b/ca/c2c092e3d7b516325863b5b1d57c5be9837f8e60557858ef52efb985aa0d/pirlygenes-2.2.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.2.1 2026-04-19T18:55:12,200 Skipping link: No binaries permitted for pirlygenes: 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2026-04-19T18:55:12,203 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/8a/44/da6370091aea72fec9b67e936a15ae4ebdf9dff908aa9d19047e94159d04/pirlygenes-2.3.2-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,204 Found link https://files.pythonhosted.org/packages/10/a9/907cc4508814906e8c990c01f4f5a8e876d8494a06e48b3231bc8cb0fc76/pirlygenes-2.3.2.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.3.2 2026-04-19T18:55:12,205 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/3f/b6/830da154d45d5ac46ae4fec7615e8cad6fdc54a8977e3ad5d5b719b3e381/pirlygenes-2.4.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,206 Found link https://files.pythonhosted.org/packages/72/cb/85849617feaf50f329a0545583033d697e353ad48f34484f70c94a38a7fe/pirlygenes-2.4.0.tar.gz (from 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https://files.pythonhosted.org/packages/6a/f7/cd7bb912ebd9a8fd5678378444dd4cbf57614f841b83aca8d8ae68221512/pirlygenes-2.4.2.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.4.2 2026-04-19T18:55:12,209 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/06/ba/c6259e141db6ae01ab36e9b24878291184fa9551fbba7d8cc122d162370a/pirlygenes-2.5.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,210 Found link https://files.pythonhosted.org/packages/2a/02/a683073293d6e1567e993c5ddeb5b4f20cecf9c143b7c34ca69c6b0fe0bf/pirlygenes-2.5.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.5.0 2026-04-19T18:55:12,211 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/3b/3a/d237a82d8794a11a26a1ef9bfff88a11e9bdf47b1f6505e328954ced2b0e/pirlygenes-2.5.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,212 Found link https://files.pythonhosted.org/packages/b5/e2/879e92ab87381e4ef635263624155d4f2331588bc05aea8a223225f108f7/pirlygenes-2.5.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.5.1 2026-04-19T18:55:12,213 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/a4/c0/3c64fac1cdedad5802d2905b10f836c5a5d805a9dc0d0beeda285a065df3/pirlygenes-2.6.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,214 Found link https://files.pythonhosted.org/packages/2a/df/7ffd654f123a21c608210fe4ed416bda8e56ceb36743d27a8fa4b9eace1e/pirlygenes-2.6.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.6.0 2026-04-19T18:55:12,215 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/f0/d2/7ffa0b7cc699219de0878a38a56a56cdae06b1ca3c9ff50044206427a807/pirlygenes-2.6.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,215 Found link https://files.pythonhosted.org/packages/f6/b2/938ef2e7e5d2a6bee6875aeeb1ed25157d2cdbec1b11345a753cd45565e5/pirlygenes-2.6.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.6.1 2026-04-19T18:55:12,216 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/7b/fb/bc52d124faa5327f959bd76cc38660bc2a83aecb0407925ea1049ef3959b/pirlygenes-2.7.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,217 Found link https://files.pythonhosted.org/packages/15/67/d13b9f14153a2b9aea2b84de47f2e83691875d365f34778b508481422836/pirlygenes-2.7.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.7.0 2026-04-19T18:55:12,218 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/57/7c/f087e5968735238e4782164c5af185405be0eec060121b61c187f5c55429/pirlygenes-2.7.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,219 Found link https://files.pythonhosted.org/packages/0a/9f/6f1a18016493c71ae63b236e4e5186535b85f15188b969cfded686dec47a/pirlygenes-2.7.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.7.1 2026-04-19T18:55:12,220 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/34/d6/ffd2ae0d7511cb22ee2b857520a19acb21ff834f8d8baaa2e70c4c542d7f/pirlygenes-2.8.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,220 Found link https://files.pythonhosted.org/packages/33/84/8cd197f6dc1169477bc562d9d667a30ccb0488747c3fe5682e91dea7e16c/pirlygenes-2.8.0.tar.gz (from 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https://files.pythonhosted.org/packages/70/9e/1157f5be862f2934c4601e58c170f604ec09a41f39353e19db0cfabd3747/pirlygenes-2.9.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.9.0 2026-04-19T18:55:12,224 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/6b/80/dfbdeb2a06952345e1a272f55eea07270f41c478be600056c0df5b0271d6/pirlygenes-2.10.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,225 Found link https://files.pythonhosted.org/packages/16/66/a9669f568842a86ec7b40ca9405cdefdafbd5835aebefa7f042f28db4735/pirlygenes-2.10.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 2.10.0 2026-04-19T18:55:12,226 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/fd/49/2f105db973d6a1c5529814f286d8e1a30d25f4ad3186069ad88a2b12de73/pirlygenes-2.11.0-py3-none-any.whl (from 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https://files.pythonhosted.org/packages/3c/63/246b845b7227c37a250db7fb0857c042afc2a189657900b0bfee25cd573b/pirlygenes-4.21.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 4.21.0 2026-04-19T18:55:12,354 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/9a/c6/1c792c9835b86e15182150ee74b4b91b1c8a11aeff74e062b9f91b29b8f3/pirlygenes-4.22.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,355 Found link https://files.pythonhosted.org/packages/29/23/9b067fb0f43a46beeff94705f06a62eddf2d2ea07d603f1b6bff314ee825/pirlygenes-4.22.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 4.22.0 2026-04-19T18:55:12,356 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/25/0b/26eb662d30b0cfe08229ad41bfb4e3cc8176c2de3291472fc27a2b3c454a/pirlygenes-4.22.1-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,357 Found link https://files.pythonhosted.org/packages/0b/79/0c209c92cceac9c5070045cf13504a267981edfbe6c77bf9baf447cf8ae5/pirlygenes-4.22.1.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 4.22.1 2026-04-19T18:55:12,357 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/9c/c3/f24c74464fa2bbbae8a8df97550dbcb11ed188ef84fa5fdf834534cb2103/pirlygenes-4.22.2-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,358 Found link https://files.pythonhosted.org/packages/1e/67/7a8a35df0a3f6943c870a14ebbdc458fa6b94ae07abc808b498a62bf59ab/pirlygenes-4.22.2.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 4.22.2 2026-04-19T18:55:12,359 Skipping link: No binaries permitted for pirlygenes: 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2026-04-19T18:55:12,362 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/07/d9/5bda6256d00f9445a333f04d2b7d05a01678e3a7939e07cdec163c820444/pirlygenes-4.24.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,363 Found link https://files.pythonhosted.org/packages/c0/ad/c748fa27bba2dbae03945649ec6edb5e54581862fc693bb4867fb10e7819/pirlygenes-4.24.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 4.24.0 2026-04-19T18:55:12,364 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/90/79/340de0a5794609f5bc87dc0a48d44c09a8f621038668bdcea13100ab61db/pirlygenes-4.25.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,365 Found link https://files.pythonhosted.org/packages/fc/03/2c3dcd92f9922c74b267e85ca1c4388b3dff044faa430a0a3cd39d674b26/pirlygenes-4.25.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 4.25.0 2026-04-19T18:55:12,366 Skipping link: No binaries permitted for pirlygenes: https://files.pythonhosted.org/packages/e1/bc/23fdf59510c4e4508b92ba2b59303275d591a7569678fe67dbb7c9aed553/pirlygenes-4.26.0-py3-none-any.whl (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,366 Found link https://files.pythonhosted.org/packages/f8/33/d74d95e69684a2e147223620a64cac0505831d966f7901bb8cb71c03ab17/pirlygenes-4.26.0.tar.gz (from https://pypi.org/simple/pirlygenes/) (requires-python:>=3.9), version: 4.26.0 2026-04-19T18:55:12,367 Fetching project page and analyzing links: https://www.piwheels.org/simple/pirlygenes/ 2026-04-19T18:55:12,368 Getting page https://www.piwheels.org/simple/pirlygenes/ 2026-04-19T18:55:12,369 Found index url https://www.piwheels.org/simple 2026-04-19T18:55:12,540 Fetched page https://www.piwheels.org/simple/pirlygenes/ as text/html 2026-04-19T18:55:12,570 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-4.25.0-py3-none-any.whl#sha256=795152fcea6e6bfc026a9e204e4bc56776a47a322d7333c11255268ea3619020 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,571 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-4.24.0-py3-none-any.whl#sha256=94f9f48c54715f4ed68b9c978fde4741f7e1a3f760400f0a0958418baa80400d (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,572 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-4.23.0-py3-none-any.whl#sha256=4aa59937bbbb56fc178db480f073fb913704551d1af76d306b70cb5b16d4e5ab (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,572 Skipping link: No binaries permitted for pirlygenes: 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https://www.piwheels.org/simple/pirlygenes/pirlygenes-3.20.1-py3-none-any.whl#sha256=86e4220265038750afe45430276a66744522c0f8a937f2c655768ef400798145 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,605 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-3.20.0-py3-none-any.whl#sha256=ff29ba6cf440e8202bb947f4583c987c80f95476dc13ab4d64d053bbf1e559dc (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,605 Skipping link: No binaries permitted for pirlygenes: https://www.piwheels.org/simple/pirlygenes/pirlygenes-3.18.0-py3-none-any.whl#sha256=5b17ce44e37ecbad6a524c3d837efdb6136271e5a74d1101eed11cbf21694c8b (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,606 Skipping link: No binaries permitted for pirlygenes: 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https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-3.16.0-py3-none-any.whl#sha256=6efbd35f9ef2a58a80782a1b4fd6916cec576adf30e28b0b5c461eb36b861ca8 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,608 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-3.15.1-py3-none-any.whl#sha256=382099ae42ae099e6ee19d47847dded6aa7dea10ddfc457f0d9072be76024b70 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,609 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-3.15.0-py3-none-any.whl#sha256=49824052e155ec70ad9ac304e03076602cd05f7e3179093a90896576cae978df (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,609 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-3.14.1-py3-none-any.whl#sha256=062d277a87b1b983d7ba8e6dc670194e6000ec37acd07f00b04d3e99adbc17cc (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,610 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-3.14.0-py3-none-any.whl#sha256=0c1c54241e14cf3132c8654a0d4ae56128ef5bbe252dba4063f95ecbeb5656a4 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,610 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-3.13.0-py3-none-any.whl#sha256=714cca4f7ed4becf11d1a06faaac0767c47e5abdad0ae798f639014a483f310a (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,611 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-3.9.1-py3-none-any.whl#sha256=01c3382cd3a9e5b1098522145014e000ced5cb416e8bb9b0b0a4342fb73d3861 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,612 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-3.9.0-py3-none-any.whl#sha256=8a5d019750603a574ab513958ccda679a3fb9bc3fc5e0bf9ee3a4ab981ce11cd (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,612 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-3.8.0-py3-none-any.whl#sha256=8647e92b624b8f8e566be6ac2fe3db4da2c918e4b50e72f19c44ef7091244be9 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,613 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-3.7.0-py3-none-any.whl#sha256=314bf8c48fa380a0f57c6db57a0cc51ff515eb8bcbe76f35efcd288708c8db22 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,614 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-3.6.0-py3-none-any.whl#sha256=102d759271fe20631692f659a53b89532340331dd43449ebd9b2ecb9b1227904 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,614 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-3.5.0-py3-none-any.whl#sha256=ed66b0d6ee8bce3057a9eee4e3479cb013f235ada0d0b65385f2b9c28d03bf78 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,615 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-3.4.0-py3-none-any.whl#sha256=3163d9bc66fc382f57d04c43c6e1aa6686b86b6149cc0d0950943eae1713f354 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,615 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-3.3.0-py3-none-any.whl#sha256=63aa8303d4a13748d514a39bb8efe52dc60565cff43ad06dd76a653967ccb33a (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,616 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-3.2.0-py3-none-any.whl#sha256=85fead9c44e027431aae1b82b31093d2cb7006e21cd01d33b7445eb8c9948f40 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,616 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-3.1.0-py3-none-any.whl#sha256=4251fa90f4f8fb242c184fedde61659c34349d8fc56ee826de4488e5c5c11039 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,617 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-3.0.0-py3-none-any.whl#sha256=40b6b1094f878a48f7ccf12418b061fe33d3a8fd773093523159c983af518352 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,617 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.14.0-py3-none-any.whl#sha256=057ce48582bffd44e37684068b1e64e750349609703d93d80efa875cb9b00d12 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,618 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.13.0-py3-none-any.whl#sha256=e13770f973755e3b8db3fc2f70e2d674dd6055486bb4c242b0663dc91da8137d (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,619 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.12.0-py3-none-any.whl#sha256=4186f04e1d7c70e23fa5546b20cdac46e49b68e86fc5bda42db5151921548f5d (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,619 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.11.0-py3-none-any.whl#sha256=fb3178b049345f9c0317f2836b267df8ff2b0f59ce7ddaf5dd9b25db24deae3d (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,620 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.10.0-py3-none-any.whl#sha256=393a743c2c0abdcbb8f787acfe60892c2335aa4a6be80038396dc5b27473274c (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,620 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.9.0-py3-none-any.whl#sha256=ca97e53c115bc9d06958ccce0494c60d942faba3dd044564ca15284523b8ec19 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,621 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.8.1-py3-none-any.whl#sha256=1b346af13b190e47650615724130b80dc1044b25269d3603013a7436e13f4ab6 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,622 Skipping link: No binaries permitted for pirlygenes: 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https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.6.1-py3-none-any.whl#sha256=7f45bca601f637ca0bfa8466169c84685b60a3dd5fcb8d07132cd1fa4159f3a8 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,624 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.6.0-py3-none-any.whl#sha256=99581a72b34217d895a9e9377aebff39d3cccb34eea0c01f3056f29d8ea69479 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,624 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.5.1-py3-none-any.whl#sha256=b097b3f8b48f33c23fc888588f0644e92b3b973d37536ae992576cff3d2c550a (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,625 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.5.0-py3-none-any.whl#sha256=7ed846a4e0950617d0103bb8a51b54f0f00bfa982caa83c9013067f52251e39e (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,625 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.4.2-py3-none-any.whl#sha256=25793e34918b22dc36562123fdf4e753df72f9cc712aa69c1f151b96a09ab68a (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,626 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.4.1-py3-none-any.whl#sha256=a8a045cb5d44a0dc2d8d5b5d15f847d44c7fcbf4e65dfb65be5127275d30604c (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,627 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.4.0-py3-none-any.whl#sha256=06c550405b77c1a7f42776114270baca28b88844cd57d5a0f5e0ed554ee215dc (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,627 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.3.2-py3-none-any.whl#sha256=dc55fdcf24cb20e6e920706a735f11dc23aaaf50051f4a01414854d27c76e89f (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,628 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.3.1-py3-none-any.whl#sha256=c90c60420627308e8f538bbaa1306ced6e7699e82818b6016119c5b5661936b0 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,628 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.3.0-py3-none-any.whl#sha256=88bf981b5ba9b7fa0a46232499d049d3faafaf76e258e3d09e1b65ba9f97b22d (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,629 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.2.1-py3-none-any.whl#sha256=5327c129eaf178c76a60b5257dfe32546f0c09dd8881ddb296f458e11934ccf7 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,630 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.2.0-py3-none-any.whl#sha256=09718fb06f1ce838406a07641c7df1df1ff56ad9bcca5e70f0dabeabf18d9eb6 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,630 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.1.0-py3-none-any.whl#sha256=6e0978a40a4b6a16e6e44012574ac0838b0abf01a40770a2b4c8e7db2aa583a6 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,631 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.0.1-py3-none-any.whl#sha256=0956b5fd3f21d43dea90b38bbc06628b327c49504aa0fc53d3d81d55208c6f5f (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,631 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-2.0.0-py3-none-any.whl#sha256=de738501d014cdb6760b96e01afa7d18cb8dac3d863d433e9ce8fce0172641f5 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,631 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-1.9.0-py3-none-any.whl#sha256=3be90370a11cc9b33de80e02b84f99700133addc5994e35bcb8b80b76f09f8ae (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,632 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-1.8.1-py3-none-any.whl#sha256=35f8427ceac3714bb6339609b7f3602ea81ea8b5642c4e760931e9a28263a28b (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,632 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-1.8.0-py3-none-any.whl#sha256=202a232caf63d7ad6c6d202e8d8c6c3f52bb57aa7bd124b14be89597a4637f02 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,633 Skipping link: No binaries permitted for pirlygenes: https://archive1.piwheels.org/simple/pirlygenes/pirlygenes-1.7.0-py3-none-any.whl#sha256=01a45cdf8948ae1d8a8034363ecd9357088d1df4c99ffb9370f8d68432ff4fa7 (from https://www.piwheels.org/simple/pirlygenes/) (requires-python:>=3.9) 2026-04-19T18:55:12,634 Skipping link: not a file: https://www.piwheels.org/simple/pirlygenes/ 2026-04-19T18:55:12,634 Skipping link: not a file: https://pypi.org/simple/pirlygenes/ 2026-04-19T18:55:12,668 Given no hashes to check 1 links for project 'pirlygenes': discarding no candidates 2026-04-19T18:55:12,690 Collecting pirlygenes==4.26.0 2026-04-19T18:55:12,692 Created temporary directory: /tmp/pip-unpack-7a_cmk05 2026-04-19T18:55:12,935 Downloading pirlygenes-4.26.0.tar.gz (21.7 MB) 2026-04-19T18:55:18,360 Added pirlygenes==4.26.0 from https://files.pythonhosted.org/packages/f8/33/d74d95e69684a2e147223620a64cac0505831d966f7901bb8cb71c03ab17/pirlygenes-4.26.0.tar.gz to build tracker '/tmp/pip-build-tracker-mb310s7s' 2026-04-19T18:55:18,366 Created temporary directory: /tmp/pip-build-env-28f3rw88 2026-04-19T18:55:18,370 Installing build dependencies: started 2026-04-19T18:55:18,372 Running command pip subprocess to install build dependencies 2026-04-19T18:55:19,511 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-04-19T18:55:19,999 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-04-19T18:55:20,022 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-04-19T18:55:21,908 Collecting setuptools>=60 2026-04-19T18:55:21,996 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-04-19T18:55:22,379 Collecting setuptools-scm>=8.0 2026-04-19T18:55:22,394 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl (21 kB) 2026-04-19T18:55:22,501 Collecting vcs-versioning>=1.0.0.dev0 2026-04-19T18:55:22,530 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl (79 kB) 2026-04-19T18:55:22,710 Collecting packaging>=20 2026-04-19T18:55:22,736 Using cached https://www.piwheels.org/simple/packaging/packaging-26.1-py3-none-any.whl (95 kB) 2026-04-19T18:55:25,715 Installing collected packages: setuptools, packaging, vcs-versioning, setuptools-scm 2026-04-19T18:55:29,304 Creating /tmp/pip-build-env-28f3rw88/overlay/local/bin 2026-04-19T18:55:29,306 changing mode of /tmp/pip-build-env-28f3rw88/overlay/local/bin/vcs-versioning to 755 2026-04-19T18:55:29,416 changing mode of /tmp/pip-build-env-28f3rw88/overlay/local/bin/setuptools-scm to 755 2026-04-19T18:55:29,442 Successfully installed packaging-26.1 setuptools-82.0.1 setuptools-scm-10.0.5 vcs-versioning-1.1.1 2026-04-19T18:55:29,729 Installing build dependencies: finished with status 'done' 2026-04-19T18:55:29,747 Getting requirements to build wheel: started 2026-04-19T18:55:29,748 Running command Getting requirements to build wheel 2026-04-19T18:55:30,416 toml section missing PosixPath('pyproject.toml') does not contain any of the tool sections: ['setuptools_scm', 'vcs-versioning'] 2026-04-19T18:55:30,537 /tmp/pip-build-env-28f3rw88/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-19T18:55:30,538 !! 2026-04-19T18:55:30,539 ******************************************************************************** 2026-04-19T18:55:30,539 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-19T18:55:30,541 License :: OSI Approved :: Apache Software License 2026-04-19T18:55:30,542 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-19T18:55:30,543 ******************************************************************************** 2026-04-19T18:55:30,544 !! 2026-04-19T18:55:30,544 dist._finalize_license_expression() 2026-04-19T18:55:30,545 /tmp/pip-build-env-28f3rw88/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-19T18:55:30,545 !! 2026-04-19T18:55:30,546 ******************************************************************************** 2026-04-19T18:55:30,547 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-19T18:55:30,548 License :: OSI Approved :: Apache Software License 2026-04-19T18:55:30,549 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-19T18:55:30,550 ******************************************************************************** 2026-04-19T18:55:30,551 !! 2026-04-19T18:55:30,552 self._finalize_license_expression() 2026-04-19T18:55:30,553 running egg_info 2026-04-19T18:55:30,561 writing pirlygenes.egg-info/PKG-INFO 2026-04-19T18:55:30,567 writing dependency_links to pirlygenes.egg-info/dependency_links.txt 2026-04-19T18:55:30,569 writing entry points to pirlygenes.egg-info/entry_points.txt 2026-04-19T18:55:30,571 writing requirements to pirlygenes.egg-info/requires.txt 2026-04-19T18:55:30,572 writing top-level names to pirlygenes.egg-info/top_level.txt 2026-04-19T18:55:30,618 /tmp/pip-build-env-28f3rw88/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-04-19T18:55:30,618 return get_active_overrides().subprocess_timeout 2026-04-19T18:55:30,627 listing git files failed - pretending there aren't any 2026-04-19T18:55:30,636 reading manifest file 'pirlygenes.egg-info/SOURCES.txt' 2026-04-19T18:55:30,649 adding license file 'LICENSE' 2026-04-19T18:55:30,657 writing manifest file 'pirlygenes.egg-info/SOURCES.txt' 2026-04-19T18:55:30,763 Getting requirements to build wheel: finished with status 'done' 2026-04-19T18:55:30,766 Created temporary directory: /tmp/pip-modern-metadata-ig9kuxi8 2026-04-19T18:55:30,769 Preparing metadata (pyproject.toml): started 2026-04-19T18:55:30,770 Running command Preparing metadata (pyproject.toml) 2026-04-19T18:55:31,430 toml section missing PosixPath('pyproject.toml') does not contain any of the tool sections: ['setuptools_scm', 'vcs-versioning'] 2026-04-19T18:55:31,545 /tmp/pip-build-env-28f3rw88/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-19T18:55:31,546 !! 2026-04-19T18:55:31,547 ******************************************************************************** 2026-04-19T18:55:31,547 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-19T18:55:31,549 License :: OSI Approved :: Apache Software License 2026-04-19T18:55:31,550 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-19T18:55:31,551 ******************************************************************************** 2026-04-19T18:55:31,552 !! 2026-04-19T18:55:31,553 dist._finalize_license_expression() 2026-04-19T18:55:31,553 /tmp/pip-build-env-28f3rw88/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-19T18:55:31,554 !! 2026-04-19T18:55:31,555 ******************************************************************************** 2026-04-19T18:55:31,556 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-19T18:55:31,557 License :: OSI Approved :: Apache Software License 2026-04-19T18:55:31,558 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-19T18:55:31,559 ******************************************************************************** 2026-04-19T18:55:31,560 !! 2026-04-19T18:55:31,560 self._finalize_license_expression() 2026-04-19T18:55:31,561 running dist_info 2026-04-19T18:55:31,577 creating /tmp/pip-modern-metadata-ig9kuxi8/pirlygenes.egg-info 2026-04-19T18:55:31,578 writing /tmp/pip-modern-metadata-ig9kuxi8/pirlygenes.egg-info/PKG-INFO 2026-04-19T18:55:31,583 writing dependency_links to /tmp/pip-modern-metadata-ig9kuxi8/pirlygenes.egg-info/dependency_links.txt 2026-04-19T18:55:31,585 writing entry points to /tmp/pip-modern-metadata-ig9kuxi8/pirlygenes.egg-info/entry_points.txt 2026-04-19T18:55:31,587 writing requirements to /tmp/pip-modern-metadata-ig9kuxi8/pirlygenes.egg-info/requires.txt 2026-04-19T18:55:31,589 writing top-level names to /tmp/pip-modern-metadata-ig9kuxi8/pirlygenes.egg-info/top_level.txt 2026-04-19T18:55:31,590 writing manifest file '/tmp/pip-modern-metadata-ig9kuxi8/pirlygenes.egg-info/SOURCES.txt' 2026-04-19T18:55:31,631 /tmp/pip-build-env-28f3rw88/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-04-19T18:55:31,632 return get_active_overrides().subprocess_timeout 2026-04-19T18:55:31,639 listing git files failed - pretending there aren't any 2026-04-19T18:55:31,647 reading manifest file '/tmp/pip-modern-metadata-ig9kuxi8/pirlygenes.egg-info/SOURCES.txt' 2026-04-19T18:55:31,649 adding license file 'LICENSE' 2026-04-19T18:55:31,654 writing manifest file '/tmp/pip-modern-metadata-ig9kuxi8/pirlygenes.egg-info/SOURCES.txt' 2026-04-19T18:55:31,656 creating '/tmp/pip-modern-metadata-ig9kuxi8/pirlygenes-4.26.0.dist-info' 2026-04-19T18:55:31,794 Preparing metadata (pyproject.toml): finished with status 'done' 2026-04-19T18:55:31,801 Source in /tmp/pip-wheel-ipzjt2s5/pirlygenes_69690ccc60b0485ea64c9819b1583839 has version 4.26.0, which satisfies requirement pirlygenes==4.26.0 from https://files.pythonhosted.org/packages/f8/33/d74d95e69684a2e147223620a64cac0505831d966f7901bb8cb71c03ab17/pirlygenes-4.26.0.tar.gz 2026-04-19T18:55:31,801 Removed pirlygenes==4.26.0 from https://files.pythonhosted.org/packages/f8/33/d74d95e69684a2e147223620a64cac0505831d966f7901bb8cb71c03ab17/pirlygenes-4.26.0.tar.gz from build tracker '/tmp/pip-build-tracker-mb310s7s' 2026-04-19T18:55:31,810 Created temporary directory: /tmp/pip-unpack-jc1oexsm 2026-04-19T18:55:31,811 Building wheels for collected packages: pirlygenes 2026-04-19T18:55:31,815 Created temporary directory: /tmp/pip-wheel-3hc4caiq 2026-04-19T18:55:31,816 Destination directory: /tmp/pip-wheel-3hc4caiq 2026-04-19T18:55:31,818 Building wheel for pirlygenes (pyproject.toml): started 2026-04-19T18:55:31,820 Running command Building wheel for pirlygenes (pyproject.toml) 2026-04-19T18:55:32,432 toml section missing PosixPath('pyproject.toml') does not contain any of the tool sections: ['setuptools_scm', 'vcs-versioning'] 2026-04-19T18:55:32,539 /tmp/pip-build-env-28f3rw88/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-19T18:55:32,540 !! 2026-04-19T18:55:32,541 ******************************************************************************** 2026-04-19T18:55:32,542 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-19T18:55:32,543 License :: OSI Approved :: Apache Software License 2026-04-19T18:55:32,544 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-19T18:55:32,545 ******************************************************************************** 2026-04-19T18:55:32,546 !! 2026-04-19T18:55:32,546 dist._finalize_license_expression() 2026-04-19T18:55:32,547 /tmp/pip-build-env-28f3rw88/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-04-19T18:55:32,547 !! 2026-04-19T18:55:32,549 ******************************************************************************** 2026-04-19T18:55:32,549 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-04-19T18:55:32,550 License :: OSI Approved :: Apache Software License 2026-04-19T18:55:32,551 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-04-19T18:55:32,552 ******************************************************************************** 2026-04-19T18:55:32,553 !! 2026-04-19T18:55:32,554 self._finalize_license_expression() 2026-04-19T18:55:32,554 running bdist_wheel 2026-04-19T18:55:32,576 running build 2026-04-19T18:55:32,576 running build_py 2026-04-19T18:55:32,579 creating build/lib/pirlygenes 2026-04-19T18:55:32,581 copying pirlygenes/plot_subtype_signature.py -> build/lib/pirlygenes 2026-04-19T18:55:32,583 copying pirlygenes/cohort_deconvolve.py -> build/lib/pirlygenes 2026-04-19T18:55:32,585 copying pirlygenes/plot_scatter.py -> build/lib/pirlygenes 2026-04-19T18:55:32,588 copying pirlygenes/brief.py -> build/lib/pirlygenes 2026-04-19T18:55:32,590 copying pirlygenes/version.py -> build/lib/pirlygenes 2026-04-19T18:55:32,592 copying pirlygenes/plot_data_helpers.py -> build/lib/pirlygenes 2026-04-19T18:55:32,594 copying pirlygenes/confidence.py -> build/lib/pirlygenes 2026-04-19T18:55:32,597 copying pirlygenes/sample_quality.py -> build/lib/pirlygenes 2026-04-19T18:55:32,599 copying pirlygenes/aggregate_gene_expression.py -> build/lib/pirlygenes 2026-04-19T18:55:32,601 copying pirlygenes/format.py -> build/lib/pirlygenes 2026-04-19T18:55:32,604 copying pirlygenes/tcga_decompose.py -> build/lib/pirlygenes 2026-04-19T18:55:32,606 copying pirlygenes/cli.py -> build/lib/pirlygenes 2026-04-19T18:55:32,612 copying pirlygenes/plot_therapy.py -> build/lib/pirlygenes 2026-04-19T18:55:32,614 copying pirlygenes/plot_target_deep_dive.py -> build/lib/pirlygenes 2026-04-19T18:55:32,617 copying pirlygenes/therapy_response.py -> build/lib/pirlygenes 2026-04-19T18:55:32,619 copying pirlygenes/plot_strip.py -> build/lib/pirlygenes 2026-04-19T18:55:32,621 copying pirlygenes/sample_context.py -> build/lib/pirlygenes 2026-04-19T18:55:32,624 copying pirlygenes/healthy_vs_tumor.py -> build/lib/pirlygenes 2026-04-19T18:55:32,627 copying pirlygenes/provenance.py -> build/lib/pirlygenes 2026-04-19T18:55:32,629 copying pirlygenes/plot.py -> build/lib/pirlygenes 2026-04-19T18:55:32,631 copying pirlygenes/gene_names.py -> build/lib/pirlygenes 2026-04-19T18:55:32,633 copying pirlygenes/gene_sets_cancer.py -> build/lib/pirlygenes 2026-04-19T18:55:32,637 copying pirlygenes/tumor_purity.py -> build/lib/pirlygenes 2026-04-19T18:55:32,641 copying pirlygenes/gene_ids.py -> build/lib/pirlygenes 2026-04-19T18:55:32,643 copying pirlygenes/plot_tumor_expr.py -> build/lib/pirlygenes 2026-04-19T18:55:32,646 copying pirlygenes/plot_embedding.py -> build/lib/pirlygenes 2026-04-19T18:55:32,650 copying pirlygenes/common.py -> build/lib/pirlygenes 2026-04-19T18:55:32,652 copying pirlygenes/__init__.py -> build/lib/pirlygenes 2026-04-19T18:55:32,654 copying pirlygenes/load_dataset.py -> build/lib/pirlygenes 2026-04-19T18:55:32,656 copying pirlygenes/load_expression.py -> build/lib/pirlygenes 2026-04-19T18:55:32,659 copying pirlygenes/transcript_to_gene.py -> build/lib/pirlygenes 2026-04-19T18:55:32,661 running egg_info 2026-04-19T18:55:32,676 writing pirlygenes.egg-info/PKG-INFO 2026-04-19T18:55:32,680 writing dependency_links to pirlygenes.egg-info/dependency_links.txt 2026-04-19T18:55:32,682 writing entry points to pirlygenes.egg-info/entry_points.txt 2026-04-19T18:55:32,684 writing requirements to pirlygenes.egg-info/requires.txt 2026-04-19T18:55:32,685 writing top-level names to pirlygenes.egg-info/top_level.txt 2026-04-19T18:55:32,719 /tmp/pip-build-env-28f3rw88/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-04-19T18:55:32,719 return get_active_overrides().subprocess_timeout 2026-04-19T18:55:32,727 listing git files failed - pretending there aren't any 2026-04-19T18:55:32,734 reading manifest file 'pirlygenes.egg-info/SOURCES.txt' 2026-04-19T18:55:32,744 adding license file 'LICENSE' 2026-04-19T18:55:32,752 writing manifest file 'pirlygenes.egg-info/SOURCES.txt' 2026-04-19T18:55:32,756 /tmp/pip-build-env-28f3rw88/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'pirlygenes.data' is absent from the `packages` configuration. 2026-04-19T18:55:32,756 !! 2026-04-19T18:55:32,758 ******************************************************************************** 2026-04-19T18:55:32,758 ############################ 2026-04-19T18:55:32,758 # Package would be ignored # 2026-04-19T18:55:32,759 ############################ 2026-04-19T18:55:32,759 Python recognizes 'pirlygenes.data' as an importable package[^1], 2026-04-19T18:55:32,760 but it is absent from setuptools' `packages` configuration. 2026-04-19T18:55:32,760 This leads to an ambiguous overall configuration. If you want to distribute this 2026-04-19T18:55:32,761 package, please make sure that 'pirlygenes.data' is explicitly added 2026-04-19T18:55:32,761 to the `packages` configuration field. 2026-04-19T18:55:32,762 Alternatively, you can also rely on setuptools' discovery methods 2026-04-19T18:55:32,762 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-04-19T18:55:32,763 instead of `find_packages(...)`/`find:`). 2026-04-19T18:55:32,764 You can read more about "package discovery" on setuptools documentation page: 2026-04-19T18:55:32,764 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-04-19T18:55:32,765 If you don't want 'pirlygenes.data' to be distributed and are 2026-04-19T18:55:32,766 already explicitly excluding 'pirlygenes.data' via 2026-04-19T18:55:32,766 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-04-19T18:55:32,766 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-04-19T18:55:32,767 combination with a more fine grained `package-data` configuration. 2026-04-19T18:55:32,768 You can read more about "package data files" on setuptools documentation page: 2026-04-19T18:55:32,769 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-04-19T18:55:32,771 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-04-19T18:55:32,772 even if it does not contain any `.py` files. 2026-04-19T18:55:32,772 On the other hand, currently there is no concept of package data 2026-04-19T18:55:32,773 directory, all directories are treated like packages. 2026-04-19T18:55:32,773 ******************************************************************************** 2026-04-19T18:55:32,774 !! 2026-04-19T18:55:32,775 check.warn(importable) 2026-04-19T18:55:32,775 /tmp/pip-build-env-28f3rw88/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'pirlygenes.decomposition' is absent from the `packages` configuration. 2026-04-19T18:55:32,776 !! 2026-04-19T18:55:32,777 ******************************************************************************** 2026-04-19T18:55:32,777 ############################ 2026-04-19T18:55:32,778 # Package would be ignored # 2026-04-19T18:55:32,779 ############################ 2026-04-19T18:55:32,779 Python recognizes 'pirlygenes.decomposition' as an importable package[^1], 2026-04-19T18:55:32,780 but it is absent from setuptools' `packages` configuration. 2026-04-19T18:55:32,781 This leads to an ambiguous overall configuration. If you want to distribute this 2026-04-19T18:55:32,781 package, please make sure that 'pirlygenes.decomposition' is explicitly added 2026-04-19T18:55:32,782 to the `packages` configuration field. 2026-04-19T18:55:32,783 Alternatively, you can also rely on setuptools' discovery methods 2026-04-19T18:55:32,783 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-04-19T18:55:32,784 instead of `find_packages(...)`/`find:`). 2026-04-19T18:55:32,785 You can read more about "package discovery" on setuptools documentation page: 2026-04-19T18:55:32,786 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-04-19T18:55:32,787 If you don't want 'pirlygenes.decomposition' to be distributed and are 2026-04-19T18:55:32,787 already explicitly excluding 'pirlygenes.decomposition' via 2026-04-19T18:55:32,788 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-04-19T18:55:32,788 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-04-19T18:55:32,788 combination with a more fine grained `package-data` configuration. 2026-04-19T18:55:32,790 You can read more about "package data files" on setuptools documentation page: 2026-04-19T18:55:32,790 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-04-19T18:55:32,792 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-04-19T18:55:32,792 even if it does not contain any `.py` files. 2026-04-19T18:55:32,792 On the other hand, currently there is no concept of package data 2026-04-19T18:55:32,793 directory, all directories are treated like packages. 2026-04-19T18:55:32,793 ******************************************************************************** 2026-04-19T18:55:32,794 !! 2026-04-19T18:55:32,794 check.warn(importable) 2026-04-19T18:55:32,795 copying pirlygenes/PLAN-1.4.0-radioligand.md -> build/lib/pirlygenes 2026-04-19T18:55:32,795 creating build/lib/pirlygenes/data 2026-04-19T18:55:32,796 copying pirlygenes/data/ADC-approved.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:32,796 copying pirlygenes/data/ADC-trials.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:32,797 copying pirlygenes/data/ADC-withdrawn.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:32,797 copying pirlygenes/data/CAR-T-approved.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:32,798 copying pirlygenes/data/TCR-T-approved.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:32,798 copying pirlygenes/data/TCR-T-trials.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:32,799 copying pirlygenes/data/artifact-expectations.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:32,799 copying pirlygenes/data/bispecific-antibodies-approved.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:32,800 copying pirlygenes/data/cancer-driver-genes.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:32,800 copying pirlygenes/data/cancer-driver-variants.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:32,802 copying pirlygenes/data/cancer-family-panels.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:32,805 copying pirlygenes/data/cancer-key-genes.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:32,809 copying pirlygenes/data/cancer-surfaceome.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:32,811 copying pirlygenes/data/cancer-testis-antigens.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:32,815 copying pirlygenes/data/cancer-type-genes.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:32,818 copying pirlygenes/data/cancer-type-registry.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:32,821 copying pirlygenes/data/culture-stress-genes.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:32,823 copying pirlygenes/data/degradation-gene-pairs.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:32,825 copying pirlygenes/data/ensembl-id-aliases.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:32,828 copying pirlygenes/data/estimate-signatures.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:32,831 copying pirlygenes/data/extra-tx-mappings.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:32,833 copying pirlygenes/data/ffpe-sensitive-markers.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:32,835 copying pirlygenes/data/gene-sets.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:32,838 copying pirlygenes/data/heme-tumor-up-vs-matched-normal.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:32,840 copying pirlygenes/data/housekeeping-genes.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:32,842 copying pirlygenes/data/hpa-cell-type-expression.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:32,951 copying pirlygenes/data/lineage-genes.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:32,953 copying pirlygenes/data/mitochondrial-genes.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:32,955 copying pirlygenes/data/multispecific-tcell-engager-trials.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:32,958 copying pirlygenes/data/pan-cancer-expression.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:33,124 copying pirlygenes/data/radioligand-targets.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:33,126 copying pirlygenes/data/subtype-deconvolved-expression.csv.gz -> build/lib/pirlygenes/data 2026-04-19T18:55:33,272 copying pirlygenes/data/surface-proteins.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:33,279 copying pirlygenes/data/tcga-deconvolved-expression.csv.gz -> build/lib/pirlygenes/data 2026-04-19T18:55:33,364 copying pirlygenes/data/therapy-response-signatures.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:33,367 copying pirlygenes/data/tme-markers.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:33,370 copying pirlygenes/data/tumor-up-vs-matched-normal.csv -> build/lib/pirlygenes/data 2026-04-19T18:55:33,372 creating build/lib/pirlygenes/decomposition 2026-04-19T18:55:33,374 copying pirlygenes/decomposition/__init__.py -> build/lib/pirlygenes/decomposition 2026-04-19T18:55:33,376 copying pirlygenes/decomposition/engine.py -> build/lib/pirlygenes/decomposition 2026-04-19T18:55:33,380 copying pirlygenes/decomposition/panels.py -> build/lib/pirlygenes/decomposition 2026-04-19T18:55:33,383 copying pirlygenes/decomposition/plot.py -> build/lib/pirlygenes/decomposition 2026-04-19T18:55:33,386 copying pirlygenes/decomposition/signature.py -> build/lib/pirlygenes/decomposition 2026-04-19T18:55:33,389 copying pirlygenes/decomposition/templates.py -> build/lib/pirlygenes/decomposition 2026-04-19T18:55:33,407 installing to build/bdist.linux-armv7l/wheel 2026-04-19T18:55:33,407 running install 2026-04-19T18:55:33,431 running install_lib 2026-04-19T18:55:33,439 creating build/bdist.linux-armv7l/wheel 2026-04-19T18:55:33,442 creating build/bdist.linux-armv7l/wheel/pirlygenes 2026-04-19T18:55:33,443 copying build/lib/pirlygenes/plot_subtype_signature.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-19T18:55:33,446 copying build/lib/pirlygenes/cohort_deconvolve.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-19T18:55:33,449 copying build/lib/pirlygenes/plot_scatter.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-19T18:55:33,452 copying build/lib/pirlygenes/brief.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-19T18:55:33,455 copying build/lib/pirlygenes/version.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-19T18:55:33,457 copying build/lib/pirlygenes/plot_data_helpers.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-19T18:55:33,460 copying build/lib/pirlygenes/confidence.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-19T18:55:33,463 copying build/lib/pirlygenes/sample_quality.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-19T18:55:33,466 creating build/bdist.linux-armv7l/wheel/pirlygenes/decomposition 2026-04-19T18:55:33,467 copying build/lib/pirlygenes/decomposition/signature.py -> build/bdist.linux-armv7l/wheel/./pirlygenes/decomposition 2026-04-19T18:55:33,470 copying build/lib/pirlygenes/decomposition/plot.py -> build/bdist.linux-armv7l/wheel/./pirlygenes/decomposition 2026-04-19T18:55:33,473 copying build/lib/pirlygenes/decomposition/engine.py -> build/bdist.linux-armv7l/wheel/./pirlygenes/decomposition 2026-04-19T18:55:33,476 copying build/lib/pirlygenes/decomposition/templates.py -> build/bdist.linux-armv7l/wheel/./pirlygenes/decomposition 2026-04-19T18:55:33,479 copying build/lib/pirlygenes/decomposition/panels.py -> build/bdist.linux-armv7l/wheel/./pirlygenes/decomposition 2026-04-19T18:55:33,482 copying build/lib/pirlygenes/decomposition/__init__.py -> build/bdist.linux-armv7l/wheel/./pirlygenes/decomposition 2026-04-19T18:55:33,484 copying build/lib/pirlygenes/aggregate_gene_expression.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-19T18:55:33,487 copying build/lib/pirlygenes/format.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-19T18:55:33,489 copying build/lib/pirlygenes/tcga_decompose.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-19T18:55:33,492 copying build/lib/pirlygenes/cli.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-19T18:55:33,497 copying build/lib/pirlygenes/PLAN-1.4.0-radioligand.md -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-19T18:55:33,499 copying build/lib/pirlygenes/plot_therapy.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-19T18:55:33,503 creating build/bdist.linux-armv7l/wheel/pirlygenes/data 2026-04-19T18:55:33,504 copying build/lib/pirlygenes/data/ADC-approved.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:33,506 copying build/lib/pirlygenes/data/artifact-expectations.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:33,508 copying build/lib/pirlygenes/data/extra-tx-mappings.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:33,510 copying build/lib/pirlygenes/data/gene-sets.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:33,512 copying build/lib/pirlygenes/data/subtype-deconvolved-expression.csv.gz -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:33,662 copying build/lib/pirlygenes/data/lineage-genes.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:33,664 copying build/lib/pirlygenes/data/cancer-driver-genes.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:33,667 copying build/lib/pirlygenes/data/housekeeping-genes.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:33,669 copying build/lib/pirlygenes/data/pan-cancer-expression.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:33,831 copying build/lib/pirlygenes/data/cancer-key-genes.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:33,835 copying build/lib/pirlygenes/data/mitochondrial-genes.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:33,837 copying build/lib/pirlygenes/data/tme-markers.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:33,838 copying build/lib/pirlygenes/data/heme-tumor-up-vs-matched-normal.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:33,841 copying build/lib/pirlygenes/data/TCR-T-approved.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:33,843 copying build/lib/pirlygenes/data/TCR-T-trials.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:33,845 copying build/lib/pirlygenes/data/ensembl-id-aliases.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:33,848 copying build/lib/pirlygenes/data/culture-stress-genes.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:33,850 copying build/lib/pirlygenes/data/degradation-gene-pairs.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:33,852 copying build/lib/pirlygenes/data/estimate-signatures.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:33,855 copying build/lib/pirlygenes/data/CAR-T-approved.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:33,857 copying build/lib/pirlygenes/data/surface-proteins.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:33,864 copying build/lib/pirlygenes/data/ffpe-sensitive-markers.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:33,866 copying build/lib/pirlygenes/data/cancer-family-panels.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:33,868 copying build/lib/pirlygenes/data/cancer-testis-antigens.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:33,872 copying build/lib/pirlygenes/data/ADC-withdrawn.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:33,874 copying build/lib/pirlygenes/data/cancer-type-genes.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:33,876 copying build/lib/pirlygenes/data/tcga-deconvolved-expression.csv.gz -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:33,952 copying build/lib/pirlygenes/data/ADC-trials.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:33,955 copying build/lib/pirlygenes/data/cancer-driver-variants.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:33,958 copying build/lib/pirlygenes/data/radioligand-targets.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:33,959 copying build/lib/pirlygenes/data/therapy-response-signatures.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:33,961 copying build/lib/pirlygenes/data/bispecific-antibodies-approved.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:33,963 copying build/lib/pirlygenes/data/cancer-type-registry.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:33,966 copying build/lib/pirlygenes/data/hpa-cell-type-expression.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:34,085 copying build/lib/pirlygenes/data/multispecific-tcell-engager-trials.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:34,087 copying build/lib/pirlygenes/data/tumor-up-vs-matched-normal.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:34,090 copying build/lib/pirlygenes/data/cancer-surfaceome.csv -> build/bdist.linux-armv7l/wheel/./pirlygenes/data 2026-04-19T18:55:34,092 copying build/lib/pirlygenes/plot_target_deep_dive.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-19T18:55:34,095 copying build/lib/pirlygenes/therapy_response.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-19T18:55:34,097 copying build/lib/pirlygenes/plot_strip.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-19T18:55:34,100 copying build/lib/pirlygenes/sample_context.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-19T18:55:34,103 copying build/lib/pirlygenes/healthy_vs_tumor.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-19T18:55:34,106 copying build/lib/pirlygenes/provenance.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-19T18:55:34,109 copying build/lib/pirlygenes/plot.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-19T18:55:34,111 copying build/lib/pirlygenes/gene_names.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-19T18:55:34,113 copying build/lib/pirlygenes/gene_sets_cancer.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-19T18:55:34,117 copying build/lib/pirlygenes/tumor_purity.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-19T18:55:34,121 copying build/lib/pirlygenes/gene_ids.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-19T18:55:34,123 copying build/lib/pirlygenes/plot_tumor_expr.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-19T18:55:34,127 copying build/lib/pirlygenes/plot_embedding.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-19T18:55:34,130 copying build/lib/pirlygenes/common.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-19T18:55:34,133 copying build/lib/pirlygenes/__init__.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-19T18:55:34,135 copying build/lib/pirlygenes/load_dataset.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-19T18:55:34,137 copying build/lib/pirlygenes/load_expression.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-19T18:55:34,140 copying build/lib/pirlygenes/transcript_to_gene.py -> build/bdist.linux-armv7l/wheel/./pirlygenes 2026-04-19T18:55:34,142 running install_egg_info 2026-04-19T18:55:34,149 Copying pirlygenes.egg-info to build/bdist.linux-armv7l/wheel/./pirlygenes-4.26.0-py3.11.egg-info 2026-04-19T18:55:34,162 running install_scripts 2026-04-19T18:55:34,174 creating build/bdist.linux-armv7l/wheel/pirlygenes-4.26.0.dist-info/WHEEL 2026-04-19T18:55:34,176 creating '/tmp/pip-wheel-3hc4caiq/.tmp-3ri1btql/pirlygenes-4.26.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-04-19T18:55:34,179 adding 'pirlygenes/PLAN-1.4.0-radioligand.md' 2026-04-19T18:55:34,180 adding 'pirlygenes/__init__.py' 2026-04-19T18:55:34,182 adding 'pirlygenes/aggregate_gene_expression.py' 2026-04-19T18:55:34,185 adding 'pirlygenes/brief.py' 2026-04-19T18:55:34,205 adding 'pirlygenes/cli.py' 2026-04-19T18:55:34,208 adding 'pirlygenes/cohort_deconvolve.py' 2026-04-19T18:55:34,210 adding 'pirlygenes/common.py' 2026-04-19T18:55:34,211 adding 'pirlygenes/confidence.py' 2026-04-19T18:55:34,213 adding 'pirlygenes/format.py' 2026-04-19T18:55:34,215 adding 'pirlygenes/gene_ids.py' 2026-04-19T18:55:34,216 adding 'pirlygenes/gene_names.py' 2026-04-19T18:55:34,223 adding 'pirlygenes/gene_sets_cancer.py' 2026-04-19T18:55:34,227 adding 'pirlygenes/healthy_vs_tumor.py' 2026-04-19T18:55:34,229 adding 'pirlygenes/load_dataset.py' 2026-04-19T18:55:34,234 adding 'pirlygenes/load_expression.py' 2026-04-19T18:55:34,236 adding 'pirlygenes/plot.py' 2026-04-19T18:55:34,238 adding 'pirlygenes/plot_data_helpers.py' 2026-04-19T18:55:34,245 adding 'pirlygenes/plot_embedding.py' 2026-04-19T18:55:34,248 adding 'pirlygenes/plot_scatter.py' 2026-04-19T18:55:34,251 adding 'pirlygenes/plot_strip.py' 2026-04-19T18:55:34,252 adding 'pirlygenes/plot_subtype_signature.py' 2026-04-19T18:55:34,255 adding 'pirlygenes/plot_target_deep_dive.py' 2026-04-19T18:55:34,261 adding 'pirlygenes/plot_therapy.py' 2026-04-19T18:55:34,270 adding 'pirlygenes/plot_tumor_expr.py' 2026-04-19T18:55:34,272 adding 'pirlygenes/provenance.py' 2026-04-19T18:55:34,278 adding 'pirlygenes/sample_context.py' 2026-04-19T18:55:34,281 adding 'pirlygenes/sample_quality.py' 2026-04-19T18:55:34,284 adding 'pirlygenes/tcga_decompose.py' 2026-04-19T18:55:34,286 adding 'pirlygenes/therapy_response.py' 2026-04-19T18:55:34,287 adding 'pirlygenes/transcript_to_gene.py' 2026-04-19T18:55:34,299 adding 'pirlygenes/tumor_purity.py' 2026-04-19T18:55:34,300 adding 'pirlygenes/version.py' 2026-04-19T18:55:34,303 adding 'pirlygenes/data/ADC-approved.csv' 2026-04-19T18:55:34,307 adding 'pirlygenes/data/ADC-trials.csv' 2026-04-19T18:55:34,308 adding 'pirlygenes/data/ADC-withdrawn.csv' 2026-04-19T18:55:34,310 adding 'pirlygenes/data/CAR-T-approved.csv' 2026-04-19T18:55:34,311 adding 'pirlygenes/data/TCR-T-approved.csv' 2026-04-19T18:55:34,314 adding 'pirlygenes/data/TCR-T-trials.csv' 2026-04-19T18:55:34,316 adding 'pirlygenes/data/artifact-expectations.csv' 2026-04-19T18:55:34,317 adding 'pirlygenes/data/bispecific-antibodies-approved.csv' 2026-04-19T18:55:34,322 adding 'pirlygenes/data/cancer-driver-genes.csv' 2026-04-19T18:55:34,325 adding 'pirlygenes/data/cancer-driver-variants.csv' 2026-04-19T18:55:34,326 adding 'pirlygenes/data/cancer-family-panels.csv' 2026-04-19T18:55:34,337 adding 'pirlygenes/data/cancer-key-genes.csv' 2026-04-19T18:55:34,339 adding 'pirlygenes/data/cancer-surfaceome.csv' 2026-04-19T18:55:34,345 adding 'pirlygenes/data/cancer-testis-antigens.csv' 2026-04-19T18:55:34,348 adding 'pirlygenes/data/cancer-type-genes.csv' 2026-04-19T18:55:34,350 adding 'pirlygenes/data/cancer-type-registry.csv' 2026-04-19T18:55:34,352 adding 'pirlygenes/data/culture-stress-genes.csv' 2026-04-19T18:55:34,353 adding 'pirlygenes/data/degradation-gene-pairs.csv' 2026-04-19T18:55:34,355 adding 'pirlygenes/data/ensembl-id-aliases.csv' 2026-04-19T18:55:34,357 adding 'pirlygenes/data/estimate-signatures.csv' 2026-04-19T18:55:34,359 adding 'pirlygenes/data/extra-tx-mappings.csv' 2026-04-19T18:55:34,360 adding 'pirlygenes/data/ffpe-sensitive-markers.csv' 2026-04-19T18:55:34,361 adding 'pirlygenes/data/gene-sets.csv' 2026-04-19T18:55:34,363 adding 'pirlygenes/data/heme-tumor-up-vs-matched-normal.csv' 2026-04-19T18:55:34,364 adding 'pirlygenes/data/housekeeping-genes.csv' 2026-04-19T18:55:37,017 adding 'pirlygenes/data/hpa-cell-type-expression.csv' 2026-04-19T18:55:37,066 adding 'pirlygenes/data/lineage-genes.csv' 2026-04-19T18:55:37,067 adding 'pirlygenes/data/mitochondrial-genes.csv' 2026-04-19T18:55:37,069 adding 'pirlygenes/data/multispecific-tcell-engager-trials.csv' 2026-04-19T18:55:40,186 adding 'pirlygenes/data/pan-cancer-expression.csv' 2026-04-19T18:55:40,258 adding 'pirlygenes/data/radioligand-targets.csv' 2026-04-19T18:55:41,244 adding 'pirlygenes/data/subtype-deconvolved-expression.csv.gz' 2026-04-19T18:55:41,324 adding 'pirlygenes/data/surface-proteins.csv' 2026-04-19T18:55:41,832 adding 'pirlygenes/data/tcga-deconvolved-expression.csv.gz' 2026-04-19T18:55:41,864 adding 'pirlygenes/data/therapy-response-signatures.csv' 2026-04-19T18:55:41,865 adding 'pirlygenes/data/tme-markers.csv' 2026-04-19T18:55:41,866 adding 'pirlygenes/data/tumor-up-vs-matched-normal.csv' 2026-04-19T18:55:41,868 adding 'pirlygenes/decomposition/__init__.py' 2026-04-19T18:55:41,873 adding 'pirlygenes/decomposition/engine.py' 2026-04-19T18:55:41,876 adding 'pirlygenes/decomposition/panels.py' 2026-04-19T18:55:41,879 adding 'pirlygenes/decomposition/plot.py' 2026-04-19T18:55:41,881 adding 'pirlygenes/decomposition/signature.py' 2026-04-19T18:55:41,883 adding 'pirlygenes/decomposition/templates.py' 2026-04-19T18:55:41,886 adding 'pirlygenes-4.26.0.dist-info/licenses/LICENSE' 2026-04-19T18:55:41,892 adding 'pirlygenes-4.26.0.dist-info/METADATA' 2026-04-19T18:55:41,893 adding 'pirlygenes-4.26.0.dist-info/WHEEL' 2026-04-19T18:55:41,894 adding 'pirlygenes-4.26.0.dist-info/entry_points.txt' 2026-04-19T18:55:41,895 adding 'pirlygenes-4.26.0.dist-info/top_level.txt' 2026-04-19T18:55:41,897 adding 'pirlygenes-4.26.0.dist-info/RECORD' 2026-04-19T18:55:42,116 removing build/bdist.linux-armv7l/wheel 2026-04-19T18:55:42,254 Building wheel for pirlygenes (pyproject.toml): finished with status 'done' 2026-04-19T18:55:42,764 Created wheel for pirlygenes: filename=pirlygenes-4.26.0-py3-none-any.whl size=20993424 sha256=3576bd34bcd60a77a93a4f74f7ea0b800004f9d80239342d74f0bd870203e949 2026-04-19T18:55:42,766 Stored in directory: /tmp/pip-ephem-wheel-cache-xm1p18eb/wheels/8a/21/31/c1318e34e115ca1e5132da8442890d4444847ea5e0c8fcc522 2026-04-19T18:55:42,792 Successfully built pirlygenes 2026-04-19T18:55:43,276 Removed build tracker: '/tmp/pip-build-tracker-mb310s7s'