2026-05-07T03:46:57,246 Created temporary directory: /tmp/pip-ephem-wheel-cache-o5qb0jry 2026-05-07T03:46:57,248 Created temporary directory: /tmp/pip-build-tracker-ywoohpmf 2026-05-07T03:46:57,248 Initialized build tracking at /tmp/pip-build-tracker-ywoohpmf 2026-05-07T03:46:57,249 Created build tracker: /tmp/pip-build-tracker-ywoohpmf 2026-05-07T03:46:57,249 Entered build tracker: /tmp/pip-build-tracker-ywoohpmf 2026-05-07T03:46:57,250 Created temporary directory: /tmp/pip-wheel-lyc_3vfy 2026-05-07T03:46:57,253 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-05-07T03:46:57,256 Created temporary directory: /tmp/pip-ephem-wheel-cache-zrtliejp 2026-05-07T03:46:57,278 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-05-07T03:46:57,281 2 location(s) to search for versions of tidytcells: 2026-05-07T03:46:57,281 * https://pypi.org/simple/tidytcells/ 2026-05-07T03:46:57,281 * https://www.piwheels.org/simple/tidytcells/ 2026-05-07T03:46:57,282 Fetching project page and analyzing links: https://pypi.org/simple/tidytcells/ 2026-05-07T03:46:57,283 Getting page https://pypi.org/simple/tidytcells/ 2026-05-07T03:46:57,284 Found index url https://pypi.org/simple 2026-05-07T03:46:57,524 Fetched page https://pypi.org/simple/tidytcells/ as application/vnd.pypi.simple.v1+json 2026-05-07T03:46:57,539 Skipping link: No binaries permitted for tidytcells: 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https://archive1.piwheels.org/simple/tidytcells/tidytcells-1.1.1-py3-none-any.whl#sha256=5e993eb19511c5ba5e2601b1199b28b4c08d800e18109fa73ab0b7d6b678c06b (from https://www.piwheels.org/simple/tidytcells/) (requires-python:>=3.6) 2026-05-07T03:46:57,810 Skipping link: No binaries permitted for tidytcells: https://archive1.piwheels.org/simple/tidytcells/tidytcells-1.1.0-py3-none-any.whl#sha256=155401cf2f1ec2bae6bb6533dd31ab35f6eb28fbcc437a1d7298a1c0170d790b (from https://www.piwheels.org/simple/tidytcells/) (requires-python:>=3.6) 2026-05-07T03:46:57,811 Skipping link: No binaries permitted for tidytcells: https://archive1.piwheels.org/simple/tidytcells/tidytcells-1.0.0-py3-none-any.whl#sha256=b81c7a24f12818d8615a095d0e96d05c2436f7211710a5f6b6cc4ea2b4ea174e (from https://www.piwheels.org/simple/tidytcells/) (requires-python:>=3.6) 2026-05-07T03:46:57,811 Skipping link: No binaries permitted for tidytcells: https://archive1.piwheels.org/simple/tidytcells/tidytcells-0.2.0-py3-none-any.whl#sha256=0c0f622287336936c979aef5380b9c248119506899097dceeffab2d53dba5450 (from https://www.piwheels.org/simple/tidytcells/) (requires-python:>=3.10) 2026-05-07T03:46:57,812 Skipping link: No binaries permitted for tidytcells: https://archive1.piwheels.org/simple/tidytcells/tidytcells-0.1.0-py3-none-any.whl#sha256=e7160a0d65c6d4d7a271eee2d0529231e9ffd002edd965959ba56c18083d5f4c (from https://www.piwheels.org/simple/tidytcells/) (requires-python:>=3.10) 2026-05-07T03:46:57,812 Skipping link: No binaries permitted for tidytcells: https://archive1.piwheels.org/simple/tidytcells/tidytcells-0.0.5-py3-none-any.whl#sha256=e8e7640c3b6e76605f9755a68c4f2bf5223570a9118fda900f4be726558347ea (from https://www.piwheels.org/simple/tidytcells/) (requires-python:>=3.10) 2026-05-07T03:46:57,813 Skipping link: No binaries permitted for tidytcells: https://archive1.piwheels.org/simple/tidytcells/tidytcells-0.0.4-py3-none-any.whl#sha256=b6a29bf5529be0dbbd20063907b612e4e5b56d6173361b90aced5c40916464b6 (from https://www.piwheels.org/simple/tidytcells/) (requires-python:>=3.10) 2026-05-07T03:46:57,813 Skipping link: No binaries permitted for tidytcells: https://archive1.piwheels.org/simple/tidytcells/tidytcells-0.0.3-py3-none-any.whl#sha256=919339e45c7abb0e3da387ec879f5a86c91023d0162d124b8230b39e93676ad5 (from https://www.piwheels.org/simple/tidytcells/) (requires-python:>=3.10) 2026-05-07T03:46:57,814 Skipping link: No binaries permitted for tidytcells: https://archive1.piwheels.org/simple/tidytcells/tidytcells-0.0.2-py3-none-any.whl#sha256=8114364b68c0798f2699ba7315f4d9dcc701ff382b39d3394ce8e0fc0d5b60ac (from https://www.piwheels.org/simple/tidytcells/) (requires-python:>=3.10) 2026-05-07T03:46:57,814 Skipping link: No binaries permitted for tidytcells: https://archive1.piwheels.org/simple/tidytcells/tidytcells-0.0.1-py3-none-any.whl#sha256=f83cc959182da20d9aee6022c4bf0a32746ee87059d71b8c02eb592860962043 (from https://www.piwheels.org/simple/tidytcells/) (requires-python:>=3.10) 2026-05-07T03:46:57,815 Skipping link: not a file: https://www.piwheels.org/simple/tidytcells/ 2026-05-07T03:46:57,816 Skipping link: not a file: https://pypi.org/simple/tidytcells/ 2026-05-07T03:46:57,841 Given no hashes to check 1 links for project 'tidytcells': discarding no candidates 2026-05-07T03:46:57,860 Collecting tidytcells==2.2.1 2026-05-07T03:46:57,863 Created temporary directory: /tmp/pip-unpack-a8wcuviv 2026-05-07T03:46:58,094 Downloading tidytcells-2.2.1.tar.gz (108 kB) 2026-05-07T03:46:58,340 Added tidytcells==2.2.1 from https://files.pythonhosted.org/packages/94/b3/0a35839dae286989f88c3b356e3ae3cb4266ddf8cec2c94126c9c20dadc2/tidytcells-2.2.1.tar.gz to build tracker '/tmp/pip-build-tracker-ywoohpmf' 2026-05-07T03:46:58,344 Created temporary directory: /tmp/pip-build-env-s5hiiesm 2026-05-07T03:46:58,349 Installing build dependencies: started 2026-05-07T03:46:58,351 Running command pip subprocess to install build dependencies 2026-05-07T03:46:59,480 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-05-07T03:46:59,966 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-05-07T03:46:59,989 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-05-07T03:47:01,765 Collecting setuptools 2026-05-07T03:47:01,848 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-05-07T03:47:04,814 Installing collected packages: setuptools 2026-05-07T03:47:07,782 Successfully installed setuptools-82.0.1 2026-05-07T03:47:08,050 Installing build dependencies: finished with status 'done' 2026-05-07T03:47:08,057 Getting requirements to build wheel: started 2026-05-07T03:47:08,058 Running command Getting requirements to build wheel 2026-05-07T03:47:08,661 No `packages` or `py_modules` configuration, performing automatic discovery. 2026-05-07T03:47:08,661 `src-layout` detected -- analysing ./src 2026-05-07T03:47:08,668 discovered packages -- ['tidytcells', 'tidytcells._resources', 'tidytcells.tr', 'tidytcells.ig', 'tidytcells.aa', 'tidytcells._standardized_gene_symbol', 'tidytcells.mh', 'tidytcells._utils', 'tidytcells.junction', 'tidytcells._query_engine'] 2026-05-07T03:47:08,669 discovered py_modules -- [] 2026-05-07T03:47:08,747 /tmp/pip-build-env-s5hiiesm/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-07T03:47:08,747 !! 2026-05-07T03:47:08,748 ******************************************************************************** 2026-05-07T03:47:08,749 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-07T03:47:08,750 License :: OSI Approved :: MIT License 2026-05-07T03:47:08,751 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-07T03:47:08,752 ******************************************************************************** 2026-05-07T03:47:08,753 !! 2026-05-07T03:47:08,753 dist._finalize_license_expression() 2026-05-07T03:47:08,754 /tmp/pip-build-env-s5hiiesm/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-07T03:47:08,755 !! 2026-05-07T03:47:08,756 ******************************************************************************** 2026-05-07T03:47:08,757 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-07T03:47:08,758 License :: OSI Approved :: MIT License 2026-05-07T03:47:08,759 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-07T03:47:08,760 ******************************************************************************** 2026-05-07T03:47:08,761 !! 2026-05-07T03:47:08,762 self._finalize_license_expression() 2026-05-07T03:47:08,762 running egg_info 2026-05-07T03:47:08,766 writing src/tidytcells.egg-info/PKG-INFO 2026-05-07T03:47:08,772 writing dependency_links to src/tidytcells.egg-info/dependency_links.txt 2026-05-07T03:47:08,775 writing requirements to src/tidytcells.egg-info/requires.txt 2026-05-07T03:47:08,776 writing top-level names to src/tidytcells.egg-info/top_level.txt 2026-05-07T03:47:08,805 reading manifest file 'src/tidytcells.egg-info/SOURCES.txt' 2026-05-07T03:47:08,810 reading manifest template 'MANIFEST.in' 2026-05-07T03:47:08,811 adding license file 'LICENSE.txt' 2026-05-07T03:47:08,816 writing manifest file 'src/tidytcells.egg-info/SOURCES.txt' 2026-05-07T03:47:08,914 Getting requirements to build wheel: finished with status 'done' 2026-05-07T03:47:08,918 Created temporary directory: /tmp/pip-modern-metadata-s39g_uc2 2026-05-07T03:47:08,920 Preparing metadata (pyproject.toml): started 2026-05-07T03:47:08,921 Running command Preparing metadata (pyproject.toml) 2026-05-07T03:47:09,477 No `packages` or `py_modules` configuration, performing automatic discovery. 2026-05-07T03:47:09,477 `src-layout` detected -- analysing ./src 2026-05-07T03:47:09,482 discovered packages -- ['tidytcells', 'tidytcells._resources', 'tidytcells.tr', 'tidytcells.ig', 'tidytcells.aa', 'tidytcells._standardized_gene_symbol', 'tidytcells.mh', 'tidytcells._utils', 'tidytcells.junction', 'tidytcells._query_engine'] 2026-05-07T03:47:09,482 discovered py_modules -- [] 2026-05-07T03:47:09,557 /tmp/pip-build-env-s5hiiesm/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-07T03:47:09,558 !! 2026-05-07T03:47:09,559 ******************************************************************************** 2026-05-07T03:47:09,559 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-07T03:47:09,560 License :: OSI Approved :: MIT License 2026-05-07T03:47:09,561 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-07T03:47:09,562 ******************************************************************************** 2026-05-07T03:47:09,563 !! 2026-05-07T03:47:09,563 dist._finalize_license_expression() 2026-05-07T03:47:09,564 /tmp/pip-build-env-s5hiiesm/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-07T03:47:09,564 !! 2026-05-07T03:47:09,565 ******************************************************************************** 2026-05-07T03:47:09,566 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-07T03:47:09,567 License :: OSI Approved :: MIT License 2026-05-07T03:47:09,568 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-07T03:47:09,569 ******************************************************************************** 2026-05-07T03:47:09,570 !! 2026-05-07T03:47:09,571 self._finalize_license_expression() 2026-05-07T03:47:09,571 running dist_info 2026-05-07T03:47:09,579 creating /tmp/pip-modern-metadata-s39g_uc2/tidytcells.egg-info 2026-05-07T03:47:09,580 writing /tmp/pip-modern-metadata-s39g_uc2/tidytcells.egg-info/PKG-INFO 2026-05-07T03:47:09,586 writing dependency_links to /tmp/pip-modern-metadata-s39g_uc2/tidytcells.egg-info/dependency_links.txt 2026-05-07T03:47:09,589 writing requirements to /tmp/pip-modern-metadata-s39g_uc2/tidytcells.egg-info/requires.txt 2026-05-07T03:47:09,590 writing top-level names to /tmp/pip-modern-metadata-s39g_uc2/tidytcells.egg-info/top_level.txt 2026-05-07T03:47:09,592 writing manifest file '/tmp/pip-modern-metadata-s39g_uc2/tidytcells.egg-info/SOURCES.txt' 2026-05-07T03:47:09,618 reading manifest file '/tmp/pip-modern-metadata-s39g_uc2/tidytcells.egg-info/SOURCES.txt' 2026-05-07T03:47:09,619 reading manifest template 'MANIFEST.in' 2026-05-07T03:47:09,621 adding license file 'LICENSE.txt' 2026-05-07T03:47:09,625 writing manifest file '/tmp/pip-modern-metadata-s39g_uc2/tidytcells.egg-info/SOURCES.txt' 2026-05-07T03:47:09,626 creating '/tmp/pip-modern-metadata-s39g_uc2/tidytcells-2.2.1.dist-info' 2026-05-07T03:47:09,747 Preparing metadata (pyproject.toml): finished with status 'done' 2026-05-07T03:47:09,752 Source in /tmp/pip-wheel-lyc_3vfy/tidytcells_857e30d94768463cbbd9edd52ad32aee has version 2.2.1, which satisfies requirement tidytcells==2.2.1 from https://files.pythonhosted.org/packages/94/b3/0a35839dae286989f88c3b356e3ae3cb4266ddf8cec2c94126c9c20dadc2/tidytcells-2.2.1.tar.gz 2026-05-07T03:47:09,753 Removed tidytcells==2.2.1 from https://files.pythonhosted.org/packages/94/b3/0a35839dae286989f88c3b356e3ae3cb4266ddf8cec2c94126c9c20dadc2/tidytcells-2.2.1.tar.gz from build tracker '/tmp/pip-build-tracker-ywoohpmf' 2026-05-07T03:47:09,758 Created temporary directory: /tmp/pip-unpack-a_f_1i7s 2026-05-07T03:47:09,759 Building wheels for collected packages: tidytcells 2026-05-07T03:47:09,764 Created temporary directory: /tmp/pip-wheel-l1wybsbi 2026-05-07T03:47:09,765 Destination directory: /tmp/pip-wheel-l1wybsbi 2026-05-07T03:47:09,767 Building wheel for tidytcells (pyproject.toml): started 2026-05-07T03:47:09,768 Running command Building wheel for tidytcells (pyproject.toml) 2026-05-07T03:47:10,310 No `packages` or `py_modules` configuration, performing automatic discovery. 2026-05-07T03:47:10,310 `src-layout` detected -- analysing ./src 2026-05-07T03:47:10,315 discovered packages -- ['tidytcells', 'tidytcells._resources', 'tidytcells.tr', 'tidytcells.ig', 'tidytcells.aa', 'tidytcells._standardized_gene_symbol', 'tidytcells.mh', 'tidytcells._utils', 'tidytcells.junction', 'tidytcells._query_engine'] 2026-05-07T03:47:10,316 discovered py_modules -- [] 2026-05-07T03:47:10,385 /tmp/pip-build-env-s5hiiesm/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-07T03:47:10,386 !! 2026-05-07T03:47:10,387 ******************************************************************************** 2026-05-07T03:47:10,387 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-07T03:47:10,388 License :: OSI Approved :: MIT License 2026-05-07T03:47:10,389 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-07T03:47:10,390 ******************************************************************************** 2026-05-07T03:47:10,391 !! 2026-05-07T03:47:10,392 dist._finalize_license_expression() 2026-05-07T03:47:10,393 /tmp/pip-build-env-s5hiiesm/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-07T03:47:10,393 !! 2026-05-07T03:47:10,395 ******************************************************************************** 2026-05-07T03:47:10,395 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-07T03:47:10,397 License :: OSI Approved :: MIT License 2026-05-07T03:47:10,398 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-07T03:47:10,398 ******************************************************************************** 2026-05-07T03:47:10,399 !! 2026-05-07T03:47:10,400 self._finalize_license_expression() 2026-05-07T03:47:10,401 running bdist_wheel 2026-05-07T03:47:10,411 running build 2026-05-07T03:47:10,412 running build_py 2026-05-07T03:47:10,417 creating build/lib/tidytcells 2026-05-07T03:47:10,419 copying src/tidytcells/__init__.py -> build/lib/tidytcells 2026-05-07T03:47:10,422 creating build/lib/tidytcells/_resources 2026-05-07T03:47:10,423 copying src/tidytcells/_resources/__init__.py -> build/lib/tidytcells/_resources 2026-05-07T03:47:10,425 creating build/lib/tidytcells/tr 2026-05-07T03:47:10,426 copying src/tidytcells/tr/_query.py -> build/lib/tidytcells/tr 2026-05-07T03:47:10,428 copying src/tidytcells/tr/_standardize.py -> build/lib/tidytcells/tr 2026-05-07T03:47:10,431 copying src/tidytcells/tr/_get_aa_sequence.py -> build/lib/tidytcells/tr 2026-05-07T03:47:10,433 copying src/tidytcells/tr/__init__.py -> build/lib/tidytcells/tr 2026-05-07T03:47:10,435 creating build/lib/tidytcells/ig 2026-05-07T03:47:10,436 copying src/tidytcells/ig/_query.py -> build/lib/tidytcells/ig 2026-05-07T03:47:10,438 copying src/tidytcells/ig/_standardize.py -> build/lib/tidytcells/ig 2026-05-07T03:47:10,440 copying src/tidytcells/ig/_get_aa_sequence.py -> build/lib/tidytcells/ig 2026-05-07T03:47:10,442 copying src/tidytcells/ig/__init__.py -> build/lib/tidytcells/ig 2026-05-07T03:47:10,444 creating build/lib/tidytcells/aa 2026-05-07T03:47:10,445 copying src/tidytcells/aa/_standardize.py -> build/lib/tidytcells/aa 2026-05-07T03:47:10,447 copying src/tidytcells/aa/__init__.py -> build/lib/tidytcells/aa 2026-05-07T03:47:10,449 creating build/lib/tidytcells/_standardized_gene_symbol 2026-05-07T03:47:10,450 copying src/tidytcells/_standardized_gene_symbol/standardized_hla_symbol.py -> build/lib/tidytcells/_standardized_gene_symbol 2026-05-07T03:47:10,452 copying src/tidytcells/_standardized_gene_symbol/standardized_mus_musculus_tr_symbol.py -> build/lib/tidytcells/_standardized_gene_symbol 2026-05-07T03:47:10,454 copying src/tidytcells/_standardized_gene_symbol/standardized_homo_sapiens_ig_symbol.py -> build/lib/tidytcells/_standardized_gene_symbol 2026-05-07T03:47:10,455 copying src/tidytcells/_standardized_gene_symbol/standardized_tr_symbol.py -> build/lib/tidytcells/_standardized_gene_symbol 2026-05-07T03:47:10,458 copying src/tidytcells/_standardized_gene_symbol/standardized_mus_musculus_mh_symbol.py -> build/lib/tidytcells/_standardized_gene_symbol 2026-05-07T03:47:10,459 copying src/tidytcells/_standardized_gene_symbol/standardized_gene_symbol.py -> build/lib/tidytcells/_standardized_gene_symbol 2026-05-07T03:47:10,461 copying src/tidytcells/_standardized_gene_symbol/standardized_homo_sapiens_tr_symbol.py -> build/lib/tidytcells/_standardized_gene_symbol 2026-05-07T03:47:10,463 copying src/tidytcells/_standardized_gene_symbol/__init__.py -> build/lib/tidytcells/_standardized_gene_symbol 2026-05-07T03:47:10,464 copying src/tidytcells/_standardized_gene_symbol/standardized_ig_symbol.py -> build/lib/tidytcells/_standardized_gene_symbol 2026-05-07T03:47:10,467 creating build/lib/tidytcells/mh 2026-05-07T03:47:10,468 copying src/tidytcells/mh/_get_class.py -> build/lib/tidytcells/mh 2026-05-07T03:47:10,470 copying src/tidytcells/mh/_get_chain.py -> build/lib/tidytcells/mh 2026-05-07T03:47:10,471 copying src/tidytcells/mh/_query.py -> build/lib/tidytcells/mh 2026-05-07T03:47:10,473 copying src/tidytcells/mh/_standardize.py -> build/lib/tidytcells/mh 2026-05-07T03:47:10,475 copying src/tidytcells/mh/__init__.py -> build/lib/tidytcells/mh 2026-05-07T03:47:10,477 creating build/lib/tidytcells/_utils 2026-05-07T03:47:10,478 copying src/tidytcells/_utils/parameter.py -> build/lib/tidytcells/_utils 2026-05-07T03:47:10,480 copying src/tidytcells/_utils/string_cleaning.py -> build/lib/tidytcells/_utils 2026-05-07T03:47:10,482 copying src/tidytcells/_utils/conserved_aa_lookup.py -> build/lib/tidytcells/_utils 2026-05-07T03:47:10,483 copying src/tidytcells/_utils/warnings.py -> build/lib/tidytcells/_utils 2026-05-07T03:47:10,485 copying src/tidytcells/_utils/__init__.py -> build/lib/tidytcells/_utils 2026-05-07T03:47:10,487 creating build/lib/tidytcells/junction 2026-05-07T03:47:10,488 copying src/tidytcells/junction/_standardize.py -> build/lib/tidytcells/junction 2026-05-07T03:47:10,490 copying src/tidytcells/junction/__init__.py -> build/lib/tidytcells/junction 2026-05-07T03:47:10,493 creating build/lib/tidytcells/_query_engine 2026-05-07T03:47:10,494 copying src/tidytcells/_query_engine/hla_query_engine.py -> build/lib/tidytcells/_query_engine 2026-05-07T03:47:10,496 copying src/tidytcells/_query_engine/homo_sapiens_ig_query_engine.py -> build/lib/tidytcells/_query_engine 2026-05-07T03:47:10,497 copying src/tidytcells/_query_engine/tr_query_engine.py -> build/lib/tidytcells/_query_engine 2026-05-07T03:47:10,499 copying src/tidytcells/_query_engine/query_engine.py -> build/lib/tidytcells/_query_engine 2026-05-07T03:47:10,501 copying src/tidytcells/_query_engine/mus_musculus_tr_query_engine.py -> build/lib/tidytcells/_query_engine 2026-05-07T03:47:10,503 copying src/tidytcells/_query_engine/homo_sapiens_tr_query_engine.py -> build/lib/tidytcells/_query_engine 2026-05-07T03:47:10,504 copying src/tidytcells/_query_engine/__init__.py -> build/lib/tidytcells/_query_engine 2026-05-07T03:47:10,506 copying src/tidytcells/_query_engine/mus_musculus_mh_query_engine.py -> build/lib/tidytcells/_query_engine 2026-05-07T03:47:10,508 running egg_info 2026-05-07T03:47:10,518 writing src/tidytcells.egg-info/PKG-INFO 2026-05-07T03:47:10,523 writing dependency_links to src/tidytcells.egg-info/dependency_links.txt 2026-05-07T03:47:10,525 writing requirements to src/tidytcells.egg-info/requires.txt 2026-05-07T03:47:10,527 writing top-level names to src/tidytcells.egg-info/top_level.txt 2026-05-07T03:47:10,543 reading manifest file 'src/tidytcells.egg-info/SOURCES.txt' 2026-05-07T03:47:10,548 reading manifest template 'MANIFEST.in' 2026-05-07T03:47:10,549 adding license file 'LICENSE.txt' 2026-05-07T03:47:10,554 writing manifest file 'src/tidytcells.egg-info/SOURCES.txt' 2026-05-07T03:47:10,561 copying src/tidytcells/_resources/homosapiens_ig_aa_sequences.json -> build/lib/tidytcells/_resources 2026-05-07T03:47:10,567 copying src/tidytcells/_resources/homosapiens_ig_synonyms.json -> build/lib/tidytcells/_resources 2026-05-07T03:47:10,569 copying src/tidytcells/_resources/homosapiens_mh_synonyms.json -> build/lib/tidytcells/_resources 2026-05-07T03:47:10,571 copying src/tidytcells/_resources/homosapiens_tr_aa_sequences.json -> build/lib/tidytcells/_resources 2026-05-07T03:47:10,576 copying src/tidytcells/_resources/homosapiens_tr_synonyms.json -> build/lib/tidytcells/_resources 2026-05-07T03:47:10,578 copying src/tidytcells/_resources/musmusculus_mh_synonyms.json -> build/lib/tidytcells/_resources 2026-05-07T03:47:10,581 copying src/tidytcells/_resources/musmusculus_tr_aa_sequences.json -> build/lib/tidytcells/_resources 2026-05-07T03:47:10,586 copying src/tidytcells/_resources/valid_homosapiens_ig.json -> build/lib/tidytcells/_resources 2026-05-07T03:47:10,589 copying src/tidytcells/_resources/valid_homosapiens_mh.json -> build/lib/tidytcells/_resources 2026-05-07T03:47:10,602 copying src/tidytcells/_resources/valid_homosapiens_tr.json -> build/lib/tidytcells/_resources 2026-05-07T03:47:10,604 copying src/tidytcells/_resources/valid_musmusculus_mh.json -> build/lib/tidytcells/_resources 2026-05-07T03:47:10,606 copying src/tidytcells/_resources/valid_musmusculus_tr.json -> build/lib/tidytcells/_resources 2026-05-07T03:47:10,622 installing to build/bdist.linux-armv7l/wheel 2026-05-07T03:47:10,622 running install 2026-05-07T03:47:10,645 running install_lib 2026-05-07T03:47:10,651 creating build/bdist.linux-armv7l/wheel 2026-05-07T03:47:10,653 creating build/bdist.linux-armv7l/wheel/tidytcells 2026-05-07T03:47:10,654 creating build/bdist.linux-armv7l/wheel/tidytcells/_resources 2026-05-07T03:47:10,655 copying build/lib/tidytcells/_resources/valid_homosapiens_tr.json -> build/bdist.linux-armv7l/wheel/./tidytcells/_resources 2026-05-07T03:47:10,658 copying build/lib/tidytcells/_resources/homosapiens_tr_aa_sequences.json -> build/bdist.linux-armv7l/wheel/./tidytcells/_resources 2026-05-07T03:47:10,662 copying build/lib/tidytcells/_resources/homosapiens_ig_aa_sequences.json -> build/bdist.linux-armv7l/wheel/./tidytcells/_resources 2026-05-07T03:47:10,668 copying build/lib/tidytcells/_resources/valid_musmusculus_mh.json -> build/bdist.linux-armv7l/wheel/./tidytcells/_resources 2026-05-07T03:47:10,670 copying build/lib/tidytcells/_resources/valid_homosapiens_mh.json -> build/bdist.linux-armv7l/wheel/./tidytcells/_resources 2026-05-07T03:47:10,685 copying build/lib/tidytcells/_resources/musmusculus_tr_aa_sequences.json -> build/bdist.linux-armv7l/wheel/./tidytcells/_resources 2026-05-07T03:47:10,689 copying build/lib/tidytcells/_resources/homosapiens_ig_synonyms.json -> build/bdist.linux-armv7l/wheel/./tidytcells/_resources 2026-05-07T03:47:10,691 copying build/lib/tidytcells/_resources/valid_musmusculus_tr.json -> build/bdist.linux-armv7l/wheel/./tidytcells/_resources 2026-05-07T03:47:10,694 copying build/lib/tidytcells/_resources/valid_homosapiens_ig.json -> build/bdist.linux-armv7l/wheel/./tidytcells/_resources 2026-05-07T03:47:10,697 copying build/lib/tidytcells/_resources/homosapiens_tr_synonyms.json -> build/bdist.linux-armv7l/wheel/./tidytcells/_resources 2026-05-07T03:47:10,699 copying build/lib/tidytcells/_resources/homosapiens_mh_synonyms.json -> build/bdist.linux-armv7l/wheel/./tidytcells/_resources 2026-05-07T03:47:10,701 copying build/lib/tidytcells/_resources/musmusculus_mh_synonyms.json -> build/bdist.linux-armv7l/wheel/./tidytcells/_resources 2026-05-07T03:47:10,703 copying build/lib/tidytcells/_resources/__init__.py -> build/bdist.linux-armv7l/wheel/./tidytcells/_resources 2026-05-07T03:47:10,706 creating build/bdist.linux-armv7l/wheel/tidytcells/tr 2026-05-07T03:47:10,707 copying build/lib/tidytcells/tr/_query.py -> build/bdist.linux-armv7l/wheel/./tidytcells/tr 2026-05-07T03:47:10,709 copying build/lib/tidytcells/tr/_standardize.py -> build/bdist.linux-armv7l/wheel/./tidytcells/tr 2026-05-07T03:47:10,711 copying build/lib/tidytcells/tr/_get_aa_sequence.py -> build/bdist.linux-armv7l/wheel/./tidytcells/tr 2026-05-07T03:47:10,713 copying build/lib/tidytcells/tr/__init__.py -> build/bdist.linux-armv7l/wheel/./tidytcells/tr 2026-05-07T03:47:10,715 creating build/bdist.linux-armv7l/wheel/tidytcells/ig 2026-05-07T03:47:10,716 copying build/lib/tidytcells/ig/_query.py -> build/bdist.linux-armv7l/wheel/./tidytcells/ig 2026-05-07T03:47:10,718 copying build/lib/tidytcells/ig/_standardize.py -> build/bdist.linux-armv7l/wheel/./tidytcells/ig 2026-05-07T03:47:10,720 copying build/lib/tidytcells/ig/_get_aa_sequence.py -> build/bdist.linux-armv7l/wheel/./tidytcells/ig 2026-05-07T03:47:10,722 copying build/lib/tidytcells/ig/__init__.py -> build/bdist.linux-armv7l/wheel/./tidytcells/ig 2026-05-07T03:47:10,724 creating build/bdist.linux-armv7l/wheel/tidytcells/aa 2026-05-07T03:47:10,725 copying build/lib/tidytcells/aa/_standardize.py -> build/bdist.linux-armv7l/wheel/./tidytcells/aa 2026-05-07T03:47:10,727 copying build/lib/tidytcells/aa/__init__.py -> build/bdist.linux-armv7l/wheel/./tidytcells/aa 2026-05-07T03:47:10,729 creating build/bdist.linux-armv7l/wheel/tidytcells/_standardized_gene_symbol 2026-05-07T03:47:10,730 copying build/lib/tidytcells/_standardized_gene_symbol/standardized_hla_symbol.py -> build/bdist.linux-armv7l/wheel/./tidytcells/_standardized_gene_symbol 2026-05-07T03:47:10,733 copying build/lib/tidytcells/_standardized_gene_symbol/standardized_mus_musculus_tr_symbol.py -> build/bdist.linux-armv7l/wheel/./tidytcells/_standardized_gene_symbol 2026-05-07T03:47:10,734 copying build/lib/tidytcells/_standardized_gene_symbol/standardized_homo_sapiens_ig_symbol.py -> build/bdist.linux-armv7l/wheel/./tidytcells/_standardized_gene_symbol 2026-05-07T03:47:10,736 copying build/lib/tidytcells/_standardized_gene_symbol/standardized_tr_symbol.py -> build/bdist.linux-armv7l/wheel/./tidytcells/_standardized_gene_symbol 2026-05-07T03:47:10,738 copying build/lib/tidytcells/_standardized_gene_symbol/standardized_mus_musculus_mh_symbol.py -> build/bdist.linux-armv7l/wheel/./tidytcells/_standardized_gene_symbol 2026-05-07T03:47:10,740 copying build/lib/tidytcells/_standardized_gene_symbol/standardized_gene_symbol.py -> build/bdist.linux-armv7l/wheel/./tidytcells/_standardized_gene_symbol 2026-05-07T03:47:10,742 copying build/lib/tidytcells/_standardized_gene_symbol/standardized_homo_sapiens_tr_symbol.py -> build/bdist.linux-armv7l/wheel/./tidytcells/_standardized_gene_symbol 2026-05-07T03:47:10,744 copying build/lib/tidytcells/_standardized_gene_symbol/__init__.py -> build/bdist.linux-armv7l/wheel/./tidytcells/_standardized_gene_symbol 2026-05-07T03:47:10,746 copying build/lib/tidytcells/_standardized_gene_symbol/standardized_ig_symbol.py -> build/bdist.linux-armv7l/wheel/./tidytcells/_standardized_gene_symbol 2026-05-07T03:47:10,748 creating build/bdist.linux-armv7l/wheel/tidytcells/mh 2026-05-07T03:47:10,749 copying build/lib/tidytcells/mh/_get_class.py -> build/bdist.linux-armv7l/wheel/./tidytcells/mh 2026-05-07T03:47:10,751 copying build/lib/tidytcells/mh/_get_chain.py -> build/bdist.linux-armv7l/wheel/./tidytcells/mh 2026-05-07T03:47:10,753 copying build/lib/tidytcells/mh/_query.py -> build/bdist.linux-armv7l/wheel/./tidytcells/mh 2026-05-07T03:47:10,755 copying build/lib/tidytcells/mh/_standardize.py -> build/bdist.linux-armv7l/wheel/./tidytcells/mh 2026-05-07T03:47:10,758 copying build/lib/tidytcells/mh/__init__.py -> build/bdist.linux-armv7l/wheel/./tidytcells/mh 2026-05-07T03:47:10,760 creating build/bdist.linux-armv7l/wheel/tidytcells/_utils 2026-05-07T03:47:10,761 copying build/lib/tidytcells/_utils/parameter.py -> build/bdist.linux-armv7l/wheel/./tidytcells/_utils 2026-05-07T03:47:10,763 copying build/lib/tidytcells/_utils/string_cleaning.py -> build/bdist.linux-armv7l/wheel/./tidytcells/_utils 2026-05-07T03:47:10,764 copying build/lib/tidytcells/_utils/conserved_aa_lookup.py -> build/bdist.linux-armv7l/wheel/./tidytcells/_utils 2026-05-07T03:47:10,766 copying build/lib/tidytcells/_utils/warnings.py -> build/bdist.linux-armv7l/wheel/./tidytcells/_utils 2026-05-07T03:47:10,768 copying build/lib/tidytcells/_utils/__init__.py -> build/bdist.linux-armv7l/wheel/./tidytcells/_utils 2026-05-07T03:47:10,770 creating build/bdist.linux-armv7l/wheel/tidytcells/junction 2026-05-07T03:47:10,771 copying build/lib/tidytcells/junction/_standardize.py -> build/bdist.linux-armv7l/wheel/./tidytcells/junction 2026-05-07T03:47:10,773 copying build/lib/tidytcells/junction/__init__.py -> build/bdist.linux-armv7l/wheel/./tidytcells/junction 2026-05-07T03:47:10,774 copying build/lib/tidytcells/__init__.py -> build/bdist.linux-armv7l/wheel/./tidytcells 2026-05-07T03:47:10,777 creating build/bdist.linux-armv7l/wheel/tidytcells/_query_engine 2026-05-07T03:47:10,778 copying build/lib/tidytcells/_query_engine/hla_query_engine.py -> build/bdist.linux-armv7l/wheel/./tidytcells/_query_engine 2026-05-07T03:47:10,780 copying build/lib/tidytcells/_query_engine/homo_sapiens_ig_query_engine.py -> build/bdist.linux-armv7l/wheel/./tidytcells/_query_engine 2026-05-07T03:47:10,781 copying build/lib/tidytcells/_query_engine/tr_query_engine.py -> build/bdist.linux-armv7l/wheel/./tidytcells/_query_engine 2026-05-07T03:47:10,783 copying build/lib/tidytcells/_query_engine/query_engine.py -> build/bdist.linux-armv7l/wheel/./tidytcells/_query_engine 2026-05-07T03:47:10,785 copying build/lib/tidytcells/_query_engine/mus_musculus_tr_query_engine.py -> build/bdist.linux-armv7l/wheel/./tidytcells/_query_engine 2026-05-07T03:47:10,787 copying build/lib/tidytcells/_query_engine/homo_sapiens_tr_query_engine.py -> build/bdist.linux-armv7l/wheel/./tidytcells/_query_engine 2026-05-07T03:47:10,788 copying build/lib/tidytcells/_query_engine/__init__.py -> build/bdist.linux-armv7l/wheel/./tidytcells/_query_engine 2026-05-07T03:47:10,790 copying build/lib/tidytcells/_query_engine/mus_musculus_mh_query_engine.py -> build/bdist.linux-armv7l/wheel/./tidytcells/_query_engine 2026-05-07T03:47:10,791 running install_egg_info 2026-05-07T03:47:10,796 Copying src/tidytcells.egg-info to build/bdist.linux-armv7l/wheel/./tidytcells-2.2.1-py3.11.egg-info 2026-05-07T03:47:10,805 running install_scripts 2026-05-07T03:47:10,814 creating build/bdist.linux-armv7l/wheel/tidytcells-2.2.1.dist-info/WHEEL 2026-05-07T03:47:10,817 creating '/tmp/pip-wheel-l1wybsbi/.tmp-38dv5i89/tidytcells-2.2.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-05-07T03:47:10,819 adding 'tidytcells/__init__.py' 2026-05-07T03:47:10,821 adding 'tidytcells/_query_engine/__init__.py' 2026-05-07T03:47:10,822 adding 'tidytcells/_query_engine/hla_query_engine.py' 2026-05-07T03:47:10,824 adding 'tidytcells/_query_engine/homo_sapiens_ig_query_engine.py' 2026-05-07T03:47:10,825 adding 'tidytcells/_query_engine/homo_sapiens_tr_query_engine.py' 2026-05-07T03:47:10,826 adding 'tidytcells/_query_engine/mus_musculus_mh_query_engine.py' 2026-05-07T03:47:10,828 adding 'tidytcells/_query_engine/mus_musculus_tr_query_engine.py' 2026-05-07T03:47:10,829 adding 'tidytcells/_query_engine/query_engine.py' 2026-05-07T03:47:10,830 adding 'tidytcells/_query_engine/tr_query_engine.py' 2026-05-07T03:47:10,832 adding 'tidytcells/_resources/__init__.py' 2026-05-07T03:47:10,843 adding 'tidytcells/_resources/homosapiens_ig_aa_sequences.json' 2026-05-07T03:47:10,846 adding 'tidytcells/_resources/homosapiens_ig_synonyms.json' 2026-05-07T03:47:10,847 adding 'tidytcells/_resources/homosapiens_mh_synonyms.json' 2026-05-07T03:47:10,853 adding 'tidytcells/_resources/homosapiens_tr_aa_sequences.json' 2026-05-07T03:47:10,856 adding 'tidytcells/_resources/homosapiens_tr_synonyms.json' 2026-05-07T03:47:10,857 adding 'tidytcells/_resources/musmusculus_mh_synonyms.json' 2026-05-07T03:47:10,866 adding 'tidytcells/_resources/musmusculus_tr_aa_sequences.json' 2026-05-07T03:47:10,869 adding 'tidytcells/_resources/valid_homosapiens_ig.json' 2026-05-07T03:47:10,897 adding 'tidytcells/_resources/valid_homosapiens_mh.json' 2026-05-07T03:47:10,904 adding 'tidytcells/_resources/valid_homosapiens_tr.json' 2026-05-07T03:47:10,905 adding 'tidytcells/_resources/valid_musmusculus_mh.json' 2026-05-07T03:47:10,907 adding 'tidytcells/_resources/valid_musmusculus_tr.json' 2026-05-07T03:47:10,909 adding 'tidytcells/_standardized_gene_symbol/__init__.py' 2026-05-07T03:47:10,910 adding 'tidytcells/_standardized_gene_symbol/standardized_gene_symbol.py' 2026-05-07T03:47:10,912 adding 'tidytcells/_standardized_gene_symbol/standardized_hla_symbol.py' 2026-05-07T03:47:10,913 adding 'tidytcells/_standardized_gene_symbol/standardized_homo_sapiens_ig_symbol.py' 2026-05-07T03:47:10,914 adding 'tidytcells/_standardized_gene_symbol/standardized_homo_sapiens_tr_symbol.py' 2026-05-07T03:47:10,915 adding 'tidytcells/_standardized_gene_symbol/standardized_ig_symbol.py' 2026-05-07T03:47:10,917 adding 'tidytcells/_standardized_gene_symbol/standardized_mus_musculus_mh_symbol.py' 2026-05-07T03:47:10,918 adding 'tidytcells/_standardized_gene_symbol/standardized_mus_musculus_tr_symbol.py' 2026-05-07T03:47:10,920 adding 'tidytcells/_standardized_gene_symbol/standardized_tr_symbol.py' 2026-05-07T03:47:10,921 adding 'tidytcells/_utils/__init__.py' 2026-05-07T03:47:10,923 adding 'tidytcells/_utils/conserved_aa_lookup.py' 2026-05-07T03:47:10,924 adding 'tidytcells/_utils/parameter.py' 2026-05-07T03:47:10,925 adding 'tidytcells/_utils/string_cleaning.py' 2026-05-07T03:47:10,926 adding 'tidytcells/_utils/warnings.py' 2026-05-07T03:47:10,928 adding 'tidytcells/aa/__init__.py' 2026-05-07T03:47:10,930 adding 'tidytcells/aa/_standardize.py' 2026-05-07T03:47:10,931 adding 'tidytcells/ig/__init__.py' 2026-05-07T03:47:10,933 adding 'tidytcells/ig/_get_aa_sequence.py' 2026-05-07T03:47:10,934 adding 'tidytcells/ig/_query.py' 2026-05-07T03:47:10,936 adding 'tidytcells/ig/_standardize.py' 2026-05-07T03:47:10,938 adding 'tidytcells/junction/__init__.py' 2026-05-07T03:47:10,939 adding 'tidytcells/junction/_standardize.py' 2026-05-07T03:47:10,941 adding 'tidytcells/mh/__init__.py' 2026-05-07T03:47:10,943 adding 'tidytcells/mh/_get_chain.py' 2026-05-07T03:47:10,944 adding 'tidytcells/mh/_get_class.py' 2026-05-07T03:47:10,945 adding 'tidytcells/mh/_query.py' 2026-05-07T03:47:10,947 adding 'tidytcells/mh/_standardize.py' 2026-05-07T03:47:10,949 adding 'tidytcells/tr/__init__.py' 2026-05-07T03:47:10,950 adding 'tidytcells/tr/_get_aa_sequence.py' 2026-05-07T03:47:10,952 adding 'tidytcells/tr/_query.py' 2026-05-07T03:47:10,954 adding 'tidytcells/tr/_standardize.py' 2026-05-07T03:47:10,956 adding 'tidytcells-2.2.1.dist-info/licenses/LICENSE.txt' 2026-05-07T03:47:10,957 adding 'tidytcells-2.2.1.dist-info/METADATA' 2026-05-07T03:47:10,958 adding 'tidytcells-2.2.1.dist-info/WHEEL' 2026-05-07T03:47:10,959 adding 'tidytcells-2.2.1.dist-info/top_level.txt' 2026-05-07T03:47:10,961 adding 'tidytcells-2.2.1.dist-info/RECORD' 2026-05-07T03:47:10,963 removing build/bdist.linux-armv7l/wheel 2026-05-07T03:47:11,077 Building wheel for tidytcells (pyproject.toml): finished with status 'done' 2026-05-07T03:47:11,084 Created wheel for tidytcells: filename=tidytcells-2.2.1-py3-none-any.whl size=127828 sha256=c007929e7660fb7b80518efa90534cb9329ac3c5a1c6569489ae33a11782f49c 2026-05-07T03:47:11,085 Stored in directory: /tmp/pip-ephem-wheel-cache-zrtliejp/wheels/62/c4/88/8cfe5503c1a09b4dbbfc97bf48dc270fddfe325d0207b6d7a6 2026-05-07T03:47:11,098 Successfully built tidytcells 2026-05-07T03:47:11,105 Removed build tracker: '/tmp/pip-build-tracker-ywoohpmf'