2026-05-11T20:26:44,822 Created temporary directory: /tmp/pip-ephem-wheel-cache-lqllbhmx 2026-05-11T20:26:44,824 Created temporary directory: /tmp/pip-build-tracker-f5l8womv 2026-05-11T20:26:44,825 Initialized build tracking at /tmp/pip-build-tracker-f5l8womv 2026-05-11T20:26:44,826 Created build tracker: /tmp/pip-build-tracker-f5l8womv 2026-05-11T20:26:44,826 Entered build tracker: /tmp/pip-build-tracker-f5l8womv 2026-05-11T20:26:44,827 Created temporary directory: /tmp/pip-wheel-ydoyvydn 2026-05-11T20:26:44,830 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-05-11T20:26:44,832 Created temporary directory: /tmp/pip-ephem-wheel-cache-rmd8nfj3 2026-05-11T20:26:44,855 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-05-11T20:26:44,858 2 location(s) to search for versions of topaz-em: 2026-05-11T20:26:44,858 * https://pypi.org/simple/topaz-em/ 2026-05-11T20:26:44,858 * https://www.piwheels.org/simple/topaz-em/ 2026-05-11T20:26:44,859 Fetching project page and analyzing links: https://pypi.org/simple/topaz-em/ 2026-05-11T20:26:44,860 Getting page https://pypi.org/simple/topaz-em/ 2026-05-11T20:26:44,861 Found index url https://pypi.org/simple 2026-05-11T20:26:45,244 Fetched page https://pypi.org/simple/topaz-em/ as application/vnd.pypi.simple.v1+json 2026-05-11T20:26:45,253 Found link https://files.pythonhosted.org/packages/9a/cb/4f17f2c95da5e817fad0519039e7c11602b71852a4641109d9e482b6f559/topaz-em-0.2.0.tar.gz (from 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2026-05-11T20:26:45,269 Skipping link: No binaries permitted for topaz-em: https://files.pythonhosted.org/packages/d6/5d/f8715405f1fc39b0cddaf9434c8f609fcd296e49d7e0a637a88f69e56444/topaz_em-0.3.6-py3-none-any.whl (from https://pypi.org/simple/topaz-em/) (requires-python:<=3.12,>=3.8) 2026-05-11T20:26:45,271 Found link https://files.pythonhosted.org/packages/cd/29/268eb9a391c4fa7e151956f99e8d309d89fad9381fed9d2799d7e02737af/topaz_em-0.3.6.tar.gz (from https://pypi.org/simple/topaz-em/) (requires-python:<=3.12,>=3.8), version: 0.3.6 2026-05-11T20:26:45,271 Skipping link: No binaries permitted for topaz-em: https://files.pythonhosted.org/packages/43/8f/116313380191600f92b8cc038e2eda21d520cf5e7ccdc8c5f3e90970a8c3/topaz_em-0.3.7-py3-none-any.whl (from https://pypi.org/simple/topaz-em/) (requires-python:<=3.12,>=3.8) 2026-05-11T20:26:45,272 Found link https://files.pythonhosted.org/packages/27/b6/2426a0df9de7af9c1594cdf171606318e02a1e38d7cc01a0e9ba14c3b2ec/topaz_em-0.3.7.tar.gz (from 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https://archive1.piwheels.org/simple/topaz-em/topaz_em-0.3.15-py3-none-any.whl#sha256=cdfea5b1c56d0ea674083a8104b5f89dc3d969e535aae39a9710e82707ce1e9b (from https://www.piwheels.org/simple/topaz-em/) (requires-python:>=3.8,<=3.13) 2026-05-11T20:26:45,476 Skipping link: No binaries permitted for topaz-em: https://archive1.piwheels.org/simple/topaz-em/topaz_em-0.3.14-py3-none-any.whl#sha256=d385475e6b49bf34eb17fa0fe6bc5e94ed9ce014221b40637d6e82e6c07c814a (from https://www.piwheels.org/simple/topaz-em/) (requires-python:>=3.8,<=3.13) 2026-05-11T20:26:45,477 Skipping link: No binaries permitted for topaz-em: https://archive1.piwheels.org/simple/topaz-em/topaz_em-0.3.13-py3-none-any.whl#sha256=ca442d40872fc74201f9c591f52928033a98af038fd1f7c5525d9c0566491056 (from https://www.piwheels.org/simple/topaz-em/) (requires-python:>=3.8,<=3.13) 2026-05-11T20:26:45,477 Skipping link: No binaries permitted for topaz-em: https://archive1.piwheels.org/simple/topaz-em/topaz_em-0.3.12-py3-none-any.whl#sha256=8009571e4e8b33781ae127b7bea4f90f95946f98ad795ab242ce8c9c5b426395 (from https://www.piwheels.org/simple/topaz-em/) (requires-python:>=3.8,<=3.13) 2026-05-11T20:26:45,478 Skipping link: No binaries permitted for topaz-em: https://archive1.piwheels.org/simple/topaz-em/topaz_em-0.3.11-py3-none-any.whl#sha256=86d1a70ca61fa927d90fcc5eda0cc88285812be65b54b0cdfc72c0ce0276d903 (from https://www.piwheels.org/simple/topaz-em/) (requires-python:>=3.8,<=3.12) 2026-05-11T20:26:45,479 Skipping link: No binaries permitted for topaz-em: https://archive1.piwheels.org/simple/topaz-em/topaz_em-0.3.10-py3-none-any.whl#sha256=a489fa8637ff98b2eed0ba235eb6cc5ed622a6fbb4875bd72d15e37edad54138 (from https://www.piwheels.org/simple/topaz-em/) (requires-python:>=3.8,<=3.12) 2026-05-11T20:26:45,479 Skipping link: No binaries permitted for topaz-em: https://archive1.piwheels.org/simple/topaz-em/topaz_em-0.3.7-py3-none-any.whl#sha256=0c756dce2522eb38ba1cd3816bedc647836d775670e16d9c2bdaad42b0d74269 (from https://www.piwheels.org/simple/topaz-em/) (requires-python:>=3.8,<=3.12) 2026-05-11T20:26:45,480 Skipping link: No binaries permitted for topaz-em: https://archive1.piwheels.org/simple/topaz-em/topaz_em-0.3.6-py3-none-any.whl#sha256=31bcbe65121c60b695fc172e31e788af269904cb6f023d6ea7acaadd03fd01ff (from https://www.piwheels.org/simple/topaz-em/) (requires-python:>=3.8,<=3.12) 2026-05-11T20:26:45,480 Skipping link: No binaries permitted for topaz-em: https://archive1.piwheels.org/simple/topaz-em/topaz_em-0.3.5-py3-none-any.whl#sha256=a51b117556b0902d11bad3e1b0daaeb973ae7dcb00417b8bc07c1d895553d8a8 (from https://www.piwheels.org/simple/topaz-em/) (requires-python:>=3.8,<=3.12) 2026-05-11T20:26:45,481 Skipping link: No binaries permitted for topaz-em: https://archive1.piwheels.org/simple/topaz-em/topaz_em-0.3.4-py3-none-any.whl#sha256=b962fae383a6452ef55bc823afec9fd34b6f6bbb57274fa304f3a4a234f23dd1 (from https://www.piwheels.org/simple/topaz-em/) (requires-python:>=3.8,<=3.12) 2026-05-11T20:26:45,481 Skipping link: No binaries permitted for topaz-em: https://archive1.piwheels.org/simple/topaz-em/topaz_em-0.3.1-py3-none-any.whl#sha256=fcd3dfb22ccf0bcd8b54d07fc422adb69959f2e8f5a5391a18e3af1951f8ee8c (from https://www.piwheels.org/simple/topaz-em/) 2026-05-11T20:26:45,482 Skipping link: No binaries permitted for topaz-em: https://archive1.piwheels.org/simple/topaz-em/topaz_em-0.3.0-py3-none-any.whl#sha256=e5c103dabd6452cce717a507191eb761de4ee19c5ba288a4a302a3aa1b1ef6e8 (from https://www.piwheels.org/simple/topaz-em/) 2026-05-11T20:26:45,482 Skipping link: No binaries permitted for topaz-em: https://archive1.piwheels.org/simple/topaz-em/topaz_em-0.2.5-py3-none-any.whl#sha256=67328ced1dd8efa4457ae7bdcb631764345c2c993ffa5feece627ba2c4032a88 (from https://www.piwheels.org/simple/topaz-em/) 2026-05-11T20:26:45,483 Skipping link: No binaries permitted for topaz-em: https://archive1.piwheels.org/simple/topaz-em/topaz_em-0.2.5a0-py3-none-any.whl#sha256=40669a56d2963f8562b92b6384e04ddea6c49a71b42acd170fcd8e746daf07ea (from https://www.piwheels.org/simple/topaz-em/) 2026-05-11T20:26:45,483 Skipping link: No binaries permitted for topaz-em: https://archive1.piwheels.org/simple/topaz-em/topaz_em-0.2.4-py3-none-any.whl#sha256=25561ebcb450d9aa42ef63bf569d1b60dab233206b186bb02b246d8284b23b5b (from https://www.piwheels.org/simple/topaz-em/) 2026-05-11T20:26:45,484 Skipping link: No binaries permitted for topaz-em: https://archive1.piwheels.org/simple/topaz-em/topaz_em-0.2.3-py3-none-any.whl#sha256=5c4ee55a8cc36e266f4ec651f877a0838e708aa9cf6cc47b9dcbde3db09721bb (from https://www.piwheels.org/simple/topaz-em/) 2026-05-11T20:26:45,485 Skipping link: No binaries permitted for topaz-em: https://archive1.piwheels.org/simple/topaz-em/topaz_em-0.2.2-py3-none-any.whl#sha256=0a51911e290fe605f2fe66b679611e6c2c1029e9edb6a5d8d773f2d0b96c8a4d (from https://www.piwheels.org/simple/topaz-em/) 2026-05-11T20:26:45,485 Skipping link: No binaries permitted for topaz-em: https://archive1.piwheels.org/simple/topaz-em/topaz_em-0.2.1-py2.py3-none-any.whl#sha256=b2f6e70ec7312a3436aef3c8b489653949ebc068c5cbb4040faafbec7c6babaa (from https://www.piwheels.org/simple/topaz-em/) 2026-05-11T20:26:45,486 Skipping link: No binaries permitted for topaz-em: https://archive1.piwheels.org/simple/topaz-em/topaz_em-0.2.0-py2.py3-none-any.whl#sha256=1d1baffd7a4784078276df7728dc046ffaac7af882967260db369d674bc262f3 (from https://www.piwheels.org/simple/topaz-em/) 2026-05-11T20:26:45,487 Skipping link: not a file: https://www.piwheels.org/simple/topaz-em/ 2026-05-11T20:26:45,487 Skipping link: not a file: https://pypi.org/simple/topaz-em/ 2026-05-11T20:26:45,509 Given no hashes to check 1 links for project 'topaz-em': discarding no candidates 2026-05-11T20:26:45,527 Collecting topaz-em==0.3.20 2026-05-11T20:26:45,529 Created temporary directory: /tmp/pip-unpack-ofwayp1_ 2026-05-11T20:26:45,768 Downloading topaz_em-0.3.20.tar.gz (48.2 MB) 2026-05-11T20:26:54,439 Added topaz-em==0.3.20 from https://files.pythonhosted.org/packages/ba/d1/58dca5b408df64d54ce03c506618a7d42bceff15f5e07bc6918a49888d99/topaz_em-0.3.20.tar.gz to build tracker '/tmp/pip-build-tracker-f5l8womv' 2026-05-11T20:26:54,444 Created temporary directory: /tmp/pip-build-env-iv1wltyw 2026-05-11T20:26:54,449 Installing build dependencies: started 2026-05-11T20:26:54,450 Running command pip subprocess to install build dependencies 2026-05-11T20:26:55,591 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-05-11T20:26:56,019 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-05-11T20:26:56,042 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-05-11T20:26:57,800 Collecting setuptools>=61 2026-05-11T20:26:57,873 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-05-11T20:26:58,147 Collecting wheel 2026-05-11T20:26:58,161 Using cached https://www.piwheels.org/simple/wheel/wheel-0.47.0-py3-none-any.whl (32 kB) 2026-05-11T20:26:58,343 Collecting packaging>=24.0 2026-05-11T20:26:58,360 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB) 2026-05-11T20:27:01,234 Installing collected packages: setuptools, packaging, wheel 2026-05-11T20:27:04,678 Creating /tmp/pip-build-env-iv1wltyw/overlay/local/bin 2026-05-11T20:27:04,680 changing mode of /tmp/pip-build-env-iv1wltyw/overlay/local/bin/wheel to 755 2026-05-11T20:27:04,704 Successfully installed packaging-26.2 setuptools-82.0.1 wheel-0.47.0 2026-05-11T20:27:04,980 Installing build dependencies: finished with status 'done' 2026-05-11T20:27:04,987 Getting requirements to build wheel: started 2026-05-11T20:27:04,989 Running command Getting requirements to build wheel 2026-05-11T20:27:05,616 /tmp/pip-build-env-iv1wltyw/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-05-11T20:27:05,616 !! 2026-05-11T20:27:05,617 ******************************************************************************** 2026-05-11T20:27:05,618 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-05-11T20:27:05,620 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-05-11T20:27:05,620 or your builds will no longer be supported. 2026-05-11T20:27:05,622 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-11T20:27:05,622 ******************************************************************************** 2026-05-11T20:27:05,624 !! 2026-05-11T20:27:05,624 corresp(dist, value, root_dir) 2026-05-11T20:27:05,625 /tmp/pip-build-env-iv1wltyw/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsWarning: `install_requires` overwritten in `pyproject.toml` (dependencies) 2026-05-11T20:27:05,625 corresp(dist, value, root_dir) 2026-05-11T20:27:05,696 /tmp/pip-build-env-iv1wltyw/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-11T20:27:05,697 !! 2026-05-11T20:27:05,697 ******************************************************************************** 2026-05-11T20:27:05,698 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-11T20:27:05,699 License :: OSI Approved :: GNU General Public License v3 (GPLv3) 2026-05-11T20:27:05,700 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-11T20:27:05,700 ******************************************************************************** 2026-05-11T20:27:05,701 !! 2026-05-11T20:27:05,702 dist._finalize_license_expression() 2026-05-11T20:27:05,702 /tmp/pip-build-env-iv1wltyw/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-11T20:27:05,702 !! 2026-05-11T20:27:05,704 ******************************************************************************** 2026-05-11T20:27:05,704 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-11T20:27:05,705 License :: OSI Approved :: GNU General Public License v3 (GPLv3) 2026-05-11T20:27:05,707 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-11T20:27:05,707 ******************************************************************************** 2026-05-11T20:27:05,708 !! 2026-05-11T20:27:05,709 self._finalize_license_expression() 2026-05-11T20:27:05,709 running egg_info 2026-05-11T20:27:05,712 writing topaz_em.egg-info/PKG-INFO 2026-05-11T20:27:05,716 writing dependency_links to topaz_em.egg-info/dependency_links.txt 2026-05-11T20:27:05,718 writing entry points to topaz_em.egg-info/entry_points.txt 2026-05-11T20:27:05,720 writing requirements to topaz_em.egg-info/requires.txt 2026-05-11T20:27:05,721 writing top-level names to topaz_em.egg-info/top_level.txt 2026-05-11T20:27:05,752 reading manifest file 'topaz_em.egg-info/SOURCES.txt' 2026-05-11T20:27:05,758 reading manifest template 'MANIFEST.in' 2026-05-11T20:27:05,761 adding license file 'LICENSE' 2026-05-11T20:27:05,766 writing manifest file 'topaz_em.egg-info/SOURCES.txt' 2026-05-11T20:27:05,864 Getting requirements to build wheel: finished with status 'done' 2026-05-11T20:27:05,867 Created temporary directory: /tmp/pip-modern-metadata-cn0n911w 2026-05-11T20:27:05,869 Preparing metadata (pyproject.toml): started 2026-05-11T20:27:05,871 Running command Preparing metadata (pyproject.toml) 2026-05-11T20:27:06,437 /tmp/pip-build-env-iv1wltyw/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-05-11T20:27:06,437 !! 2026-05-11T20:27:06,439 ******************************************************************************** 2026-05-11T20:27:06,439 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-05-11T20:27:06,440 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-05-11T20:27:06,441 or your builds will no longer be supported. 2026-05-11T20:27:06,442 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-11T20:27:06,443 ******************************************************************************** 2026-05-11T20:27:06,444 !! 2026-05-11T20:27:06,444 corresp(dist, value, root_dir) 2026-05-11T20:27:06,445 /tmp/pip-build-env-iv1wltyw/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsWarning: `install_requires` overwritten in `pyproject.toml` (dependencies) 2026-05-11T20:27:06,445 corresp(dist, value, root_dir) 2026-05-11T20:27:06,512 /tmp/pip-build-env-iv1wltyw/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-11T20:27:06,512 !! 2026-05-11T20:27:06,513 ******************************************************************************** 2026-05-11T20:27:06,514 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-11T20:27:06,515 License :: OSI Approved :: GNU General Public License v3 (GPLv3) 2026-05-11T20:27:06,516 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-11T20:27:06,516 ******************************************************************************** 2026-05-11T20:27:06,517 !! 2026-05-11T20:27:06,518 dist._finalize_license_expression() 2026-05-11T20:27:06,518 /tmp/pip-build-env-iv1wltyw/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-11T20:27:06,519 !! 2026-05-11T20:27:06,520 ******************************************************************************** 2026-05-11T20:27:06,521 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-11T20:27:06,522 License :: OSI Approved :: GNU General Public License v3 (GPLv3) 2026-05-11T20:27:06,523 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-11T20:27:06,524 ******************************************************************************** 2026-05-11T20:27:06,525 !! 2026-05-11T20:27:06,526 self._finalize_license_expression() 2026-05-11T20:27:06,526 running dist_info 2026-05-11T20:27:06,533 creating /tmp/pip-modern-metadata-cn0n911w/topaz_em.egg-info 2026-05-11T20:27:06,534 writing /tmp/pip-modern-metadata-cn0n911w/topaz_em.egg-info/PKG-INFO 2026-05-11T20:27:06,538 writing dependency_links to /tmp/pip-modern-metadata-cn0n911w/topaz_em.egg-info/dependency_links.txt 2026-05-11T20:27:06,540 writing entry points to /tmp/pip-modern-metadata-cn0n911w/topaz_em.egg-info/entry_points.txt 2026-05-11T20:27:06,541 writing requirements to /tmp/pip-modern-metadata-cn0n911w/topaz_em.egg-info/requires.txt 2026-05-11T20:27:06,542 writing top-level names to /tmp/pip-modern-metadata-cn0n911w/topaz_em.egg-info/top_level.txt 2026-05-11T20:27:06,544 writing manifest file '/tmp/pip-modern-metadata-cn0n911w/topaz_em.egg-info/SOURCES.txt' 2026-05-11T20:27:06,573 reading manifest file '/tmp/pip-modern-metadata-cn0n911w/topaz_em.egg-info/SOURCES.txt' 2026-05-11T20:27:06,575 reading manifest template 'MANIFEST.in' 2026-05-11T20:27:06,577 adding license file 'LICENSE' 2026-05-11T20:27:06,582 writing manifest file '/tmp/pip-modern-metadata-cn0n911w/topaz_em.egg-info/SOURCES.txt' 2026-05-11T20:27:06,583 creating '/tmp/pip-modern-metadata-cn0n911w/topaz_em-0.3.20.dist-info' 2026-05-11T20:27:06,709 Preparing metadata (pyproject.toml): finished with status 'done' 2026-05-11T20:27:06,716 Source in /tmp/pip-wheel-ydoyvydn/topaz-em_654d8472b24047e9ac1b8d8e31187520 has version 0.3.20, which satisfies requirement topaz-em==0.3.20 from https://files.pythonhosted.org/packages/ba/d1/58dca5b408df64d54ce03c506618a7d42bceff15f5e07bc6918a49888d99/topaz_em-0.3.20.tar.gz 2026-05-11T20:27:06,717 Removed topaz-em==0.3.20 from https://files.pythonhosted.org/packages/ba/d1/58dca5b408df64d54ce03c506618a7d42bceff15f5e07bc6918a49888d99/topaz_em-0.3.20.tar.gz from build tracker '/tmp/pip-build-tracker-f5l8womv' 2026-05-11T20:27:06,726 Created temporary directory: /tmp/pip-unpack-e_x4153j 2026-05-11T20:27:06,726 Building wheels for collected packages: topaz-em 2026-05-11T20:27:06,731 Created temporary directory: /tmp/pip-wheel-t0_g8ex9 2026-05-11T20:27:06,732 Destination directory: /tmp/pip-wheel-t0_g8ex9 2026-05-11T20:27:06,734 Building wheel for topaz-em (pyproject.toml): started 2026-05-11T20:27:06,735 Running command Building wheel for topaz-em (pyproject.toml) 2026-05-11T20:27:07,300 /tmp/pip-build-env-iv1wltyw/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-05-11T20:27:07,301 !! 2026-05-11T20:27:07,302 ******************************************************************************** 2026-05-11T20:27:07,302 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-05-11T20:27:07,303 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-05-11T20:27:07,304 or your builds will no longer be supported. 2026-05-11T20:27:07,305 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-11T20:27:07,305 ******************************************************************************** 2026-05-11T20:27:07,306 !! 2026-05-11T20:27:07,307 corresp(dist, value, root_dir) 2026-05-11T20:27:07,307 /tmp/pip-build-env-iv1wltyw/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsWarning: `install_requires` overwritten in `pyproject.toml` (dependencies) 2026-05-11T20:27:07,308 corresp(dist, value, root_dir) 2026-05-11T20:27:07,369 /tmp/pip-build-env-iv1wltyw/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-11T20:27:07,370 !! 2026-05-11T20:27:07,371 ******************************************************************************** 2026-05-11T20:27:07,372 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-11T20:27:07,373 License :: OSI Approved :: GNU General Public License v3 (GPLv3) 2026-05-11T20:27:07,374 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-11T20:27:07,374 ******************************************************************************** 2026-05-11T20:27:07,376 !! 2026-05-11T20:27:07,376 dist._finalize_license_expression() 2026-05-11T20:27:07,377 /tmp/pip-build-env-iv1wltyw/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-11T20:27:07,377 !! 2026-05-11T20:27:07,378 ******************************************************************************** 2026-05-11T20:27:07,379 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-11T20:27:07,380 License :: OSI Approved :: GNU General Public License v3 (GPLv3) 2026-05-11T20:27:07,381 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-11T20:27:07,382 ******************************************************************************** 2026-05-11T20:27:07,383 !! 2026-05-11T20:27:07,384 self._finalize_license_expression() 2026-05-11T20:27:07,384 running bdist_wheel 2026-05-11T20:27:07,394 running build 2026-05-11T20:27:07,395 running build_py 2026-05-11T20:27:07,401 creating build/lib/topaz 2026-05-11T20:27:07,403 copying topaz/filters.py -> build/lib/topaz 2026-05-11T20:27:07,406 copying topaz/mrc.py -> build/lib/topaz 2026-05-11T20:27:07,408 copying topaz/main.py -> build/lib/topaz 2026-05-11T20:27:07,410 copying topaz/methods.py -> build/lib/topaz 2026-05-11T20:27:07,413 copying topaz/_version.py -> build/lib/topaz 2026-05-11T20:27:07,414 copying topaz/algorithms.py -> build/lib/topaz 2026-05-11T20:27:07,416 copying topaz/cuda.py -> build/lib/topaz 2026-05-11T20:27:07,418 copying topaz/torch.py -> build/lib/topaz 2026-05-11T20:27:07,420 copying topaz/extract.py -> build/lib/topaz 2026-05-11T20:27:07,422 copying topaz/stats.py -> build/lib/topaz 2026-05-11T20:27:07,425 copying topaz/metrics.py -> build/lib/topaz 2026-05-11T20:27:07,427 copying topaz/__init__.py -> build/lib/topaz 2026-05-11T20:27:07,429 copying topaz/training.py -> build/lib/topaz 2026-05-11T20:27:07,432 copying topaz/denoise.py -> build/lib/topaz 2026-05-11T20:27:07,434 copying topaz/predict.py -> build/lib/topaz 2026-05-11T20:27:07,437 creating build/lib/topaz/utils 2026-05-11T20:27:07,438 copying topaz/utils/image.py -> build/lib/topaz/utils 2026-05-11T20:27:07,440 copying topaz/utils/conversions.py -> build/lib/topaz/utils 2026-05-11T20:27:07,442 copying topaz/utils/picks.py -> build/lib/topaz/utils 2026-05-11T20:27:07,445 copying topaz/utils/star.py -> build/lib/topaz/utils 2026-05-11T20:27:07,447 copying topaz/utils/printing.py -> build/lib/topaz/utils 2026-05-11T20:27:07,449 copying topaz/utils/files.py -> build/lib/topaz/utils 2026-05-11T20:27:07,451 copying topaz/utils/__init__.py -> build/lib/topaz/utils 2026-05-11T20:27:07,453 creating build/lib/topaz/denoising 2026-05-11T20:27:07,454 copying topaz/denoising/datasets.py -> build/lib/topaz/denoising 2026-05-11T20:27:07,456 copying topaz/denoising/__init__.py -> build/lib/topaz/denoising 2026-05-11T20:27:07,458 copying topaz/denoising/models.py -> build/lib/topaz/denoising 2026-05-11T20:27:07,461 creating build/lib/topaz/model 2026-05-11T20:27:07,462 copying topaz/model/factory.py -> build/lib/topaz/model 2026-05-11T20:27:07,464 copying topaz/model/utils.py -> build/lib/topaz/model 2026-05-11T20:27:07,466 copying topaz/model/classifier.py -> build/lib/topaz/model 2026-05-11T20:27:07,468 copying topaz/model/__init__.py -> build/lib/topaz/model 2026-05-11T20:27:07,470 copying topaz/model/generative.py -> build/lib/topaz/model 2026-05-11T20:27:07,472 creating build/lib/topaz/commands 2026-05-11T20:27:07,474 copying topaz/commands/train_test_split.py -> build/lib/topaz/commands 2026-05-11T20:27:07,476 copying topaz/commands/normalize.py -> build/lib/topaz/commands 2026-05-11T20:27:07,478 copying topaz/commands/denoise3d.py -> build/lib/topaz/commands 2026-05-11T20:27:07,480 copying topaz/commands/scale_coordinates.py -> build/lib/topaz/commands 2026-05-11T20:27:07,482 copying topaz/commands/star_to_coordinates.py -> build/lib/topaz/commands 2026-05-11T20:27:07,484 copying topaz/commands/convert.py -> build/lib/topaz/commands 2026-05-11T20:27:07,486 copying topaz/commands/gui.py -> build/lib/topaz/commands 2026-05-11T20:27:07,488 copying topaz/commands/split.py -> build/lib/topaz/commands 2026-05-11T20:27:07,490 copying topaz/commands/coordinates_to_boxes.py -> build/lib/topaz/commands 2026-05-11T20:27:07,492 copying topaz/commands/boxes_to_coordinates.py -> build/lib/topaz/commands 2026-05-11T20:27:07,494 copying topaz/commands/preprocess.py -> build/lib/topaz/commands 2026-05-11T20:27:07,495 copying topaz/commands/train.py -> build/lib/topaz/commands 2026-05-11T20:27:07,498 copying topaz/commands/extract.py -> build/lib/topaz/commands 2026-05-11T20:27:07,500 copying topaz/commands/precision_recall_curve.py -> build/lib/topaz/commands 2026-05-11T20:27:07,502 copying topaz/commands/__init__.py -> build/lib/topaz/commands 2026-05-11T20:27:07,504 copying topaz/commands/downsample.py -> build/lib/topaz/commands 2026-05-11T20:27:07,505 copying topaz/commands/star_particles_threshold.py -> build/lib/topaz/commands 2026-05-11T20:27:07,507 copying topaz/commands/coordinates_to_star.py -> build/lib/topaz/commands 2026-05-11T20:27:07,509 copying topaz/commands/coordinates_to_eman2_json.py -> build/lib/topaz/commands 2026-05-11T20:27:07,511 copying topaz/commands/segment.py -> build/lib/topaz/commands 2026-05-11T20:27:07,513 copying topaz/commands/denoise.py -> build/lib/topaz/commands 2026-05-11T20:27:07,515 copying topaz/commands/particle_stack.py -> build/lib/topaz/commands 2026-05-11T20:27:07,518 creating build/lib/topaz/transform 2026-05-11T20:27:07,519 copying topaz/transform/__init__.py -> build/lib/topaz/transform 2026-05-11T20:27:07,521 copying topaz/transform/scaled_gaussian_mixture.py -> build/lib/topaz/transform 2026-05-11T20:27:07,524 creating build/lib/topaz/utils/data 2026-05-11T20:27:07,525 copying topaz/utils/data/train_test_split_micrographs.py -> build/lib/topaz/utils/data 2026-05-11T20:27:07,527 copying topaz/utils/data/partition.py -> build/lib/topaz/utils/data 2026-05-11T20:27:07,529 copying topaz/utils/data/coordinates.py -> build/lib/topaz/utils/data 2026-05-11T20:27:07,531 copying topaz/utils/data/loader.py -> build/lib/topaz/utils/data 2026-05-11T20:27:07,533 copying topaz/utils/data/sampler.py -> build/lib/topaz/utils/data 2026-05-11T20:27:07,535 copying topaz/utils/data/__init__.py -> build/lib/topaz/utils/data 2026-05-11T20:27:07,537 copying topaz/utils/data/memory_mapped_data.py -> build/lib/topaz/utils/data 2026-05-11T20:27:07,540 creating build/lib/topaz/model/features 2026-05-11T20:27:07,541 copying topaz/model/features/basic.py -> build/lib/topaz/model/features 2026-05-11T20:27:07,543 copying topaz/model/features/densenet.py -> build/lib/topaz/model/features 2026-05-11T20:27:07,546 copying topaz/model/features/__init__.py -> build/lib/topaz/model/features 2026-05-11T20:27:07,547 copying topaz/model/features/msnet.py -> build/lib/topaz/model/features 2026-05-11T20:27:07,550 copying topaz/model/features/resnet.py -> build/lib/topaz/model/features 2026-05-11T20:27:07,553 running egg_info 2026-05-11T20:27:07,562 writing topaz_em.egg-info/PKG-INFO 2026-05-11T20:27:07,566 writing dependency_links to topaz_em.egg-info/dependency_links.txt 2026-05-11T20:27:07,567 writing entry points to topaz_em.egg-info/entry_points.txt 2026-05-11T20:27:07,569 writing requirements to topaz_em.egg-info/requires.txt 2026-05-11T20:27:07,570 writing top-level names to topaz_em.egg-info/top_level.txt 2026-05-11T20:27:07,589 reading manifest file 'topaz_em.egg-info/SOURCES.txt' 2026-05-11T20:27:07,596 reading manifest template 'MANIFEST.in' 2026-05-11T20:27:07,598 adding license file 'LICENSE' 2026-05-11T20:27:07,604 writing manifest file 'topaz_em.egg-info/SOURCES.txt' 2026-05-11T20:27:07,613 creating build/lib/topaz/gui 2026-05-11T20:27:07,614 copying topaz/gui/topaz.html -> build/lib/topaz/gui 2026-05-11T20:27:07,625 creating build/lib/topaz/pretrained/detector 2026-05-11T20:27:07,627 copying topaz/pretrained/detector/resnet16_u32.sav -> build/lib/topaz/pretrained/detector 2026-05-11T20:27:07,664 copying topaz/pretrained/detector/resnet16_u64.sav -> build/lib/topaz/pretrained/detector 2026-05-11T20:27:07,769 copying topaz/pretrained/detector/resnet8_u32.sav -> build/lib/topaz/pretrained/detector 2026-05-11T20:27:07,790 copying topaz/pretrained/detector/resnet8_u64.sav -> build/lib/topaz/pretrained/detector 2026-05-11T20:27:07,871 creating build/lib/topaz/pretrained/denoise 2026-05-11T20:27:07,873 copying topaz/pretrained/denoise/affine_L1_v0.2.2.sav -> build/lib/topaz/pretrained/denoise 2026-05-11T20:27:07,876 copying topaz/pretrained/denoise/fcnn_L1_v0.2.2.sav -> build/lib/topaz/pretrained/denoise 2026-05-11T20:27:07,911 copying topaz/pretrained/denoise/unet-3d-10a-v0.2.4.sav -> build/lib/topaz/pretrained/denoise 2026-05-11T20:27:08,086 copying topaz/pretrained/denoise/unet-3d-20a-v0.2.4.sav -> build/lib/topaz/pretrained/denoise 2026-05-11T20:27:08,253 copying topaz/pretrained/denoise/unet_L2_v0.2.1.sav -> build/lib/topaz/pretrained/denoise 2026-05-11T20:27:08,312 copying topaz/pretrained/denoise/unet_L2_v0.2.2.sav -> build/lib/topaz/pretrained/denoise 2026-05-11T20:27:08,386 copying topaz/pretrained/denoise/unet_small_L1_v0.2.2.sav -> build/lib/topaz/pretrained/denoise 2026-05-11T20:27:08,437 installing to build/bdist.linux-armv7l/wheel 2026-05-11T20:27:08,438 running install 2026-05-11T20:27:08,461 running install_lib 2026-05-11T20:27:08,466 creating build/bdist.linux-armv7l/wheel 2026-05-11T20:27:08,468 creating build/bdist.linux-armv7l/wheel/topaz 2026-05-11T20:27:08,469 copying build/lib/topaz/filters.py -> build/bdist.linux-armv7l/wheel/./topaz 2026-05-11T20:27:08,471 copying build/lib/topaz/mrc.py -> build/bdist.linux-armv7l/wheel/./topaz 2026-05-11T20:27:08,474 creating build/bdist.linux-armv7l/wheel/topaz/utils 2026-05-11T20:27:08,475 copying build/lib/topaz/utils/image.py -> build/bdist.linux-armv7l/wheel/./topaz/utils 2026-05-11T20:27:08,478 creating build/bdist.linux-armv7l/wheel/topaz/utils/data 2026-05-11T20:27:08,479 copying build/lib/topaz/utils/data/train_test_split_micrographs.py -> build/bdist.linux-armv7l/wheel/./topaz/utils/data 2026-05-11T20:27:08,481 copying build/lib/topaz/utils/data/partition.py -> build/bdist.linux-armv7l/wheel/./topaz/utils/data 2026-05-11T20:27:08,483 copying build/lib/topaz/utils/data/coordinates.py -> build/bdist.linux-armv7l/wheel/./topaz/utils/data 2026-05-11T20:27:08,484 copying build/lib/topaz/utils/data/loader.py -> build/bdist.linux-armv7l/wheel/./topaz/utils/data 2026-05-11T20:27:08,487 copying build/lib/topaz/utils/data/sampler.py -> build/bdist.linux-armv7l/wheel/./topaz/utils/data 2026-05-11T20:27:08,489 copying build/lib/topaz/utils/data/__init__.py -> build/bdist.linux-armv7l/wheel/./topaz/utils/data 2026-05-11T20:27:08,491 copying build/lib/topaz/utils/data/memory_mapped_data.py -> build/bdist.linux-armv7l/wheel/./topaz/utils/data 2026-05-11T20:27:08,493 copying build/lib/topaz/utils/conversions.py -> build/bdist.linux-armv7l/wheel/./topaz/utils 2026-05-11T20:27:08,495 copying build/lib/topaz/utils/picks.py -> build/bdist.linux-armv7l/wheel/./topaz/utils 2026-05-11T20:27:08,498 copying build/lib/topaz/utils/star.py -> build/bdist.linux-armv7l/wheel/./topaz/utils 2026-05-11T20:27:08,499 copying build/lib/topaz/utils/printing.py -> build/bdist.linux-armv7l/wheel/./topaz/utils 2026-05-11T20:27:08,501 copying build/lib/topaz/utils/files.py -> build/bdist.linux-armv7l/wheel/./topaz/utils 2026-05-11T20:27:08,504 copying build/lib/topaz/utils/__init__.py -> build/bdist.linux-armv7l/wheel/./topaz/utils 2026-05-11T20:27:08,505 copying build/lib/topaz/main.py -> build/bdist.linux-armv7l/wheel/./topaz 2026-05-11T20:27:08,507 copying build/lib/topaz/methods.py -> build/bdist.linux-armv7l/wheel/./topaz 2026-05-11T20:27:08,510 copying build/lib/topaz/_version.py -> build/bdist.linux-armv7l/wheel/./topaz 2026-05-11T20:27:08,512 creating build/bdist.linux-armv7l/wheel/topaz/denoising 2026-05-11T20:27:08,513 copying build/lib/topaz/denoising/datasets.py -> build/bdist.linux-armv7l/wheel/./topaz/denoising 2026-05-11T20:27:08,516 copying build/lib/topaz/denoising/__init__.py -> build/bdist.linux-armv7l/wheel/./topaz/denoising 2026-05-11T20:27:08,517 copying build/lib/topaz/denoising/models.py -> build/bdist.linux-armv7l/wheel/./topaz/denoising 2026-05-11T20:27:08,520 copying build/lib/topaz/algorithms.py -> build/bdist.linux-armv7l/wheel/./topaz 2026-05-11T20:27:08,522 copying build/lib/topaz/cuda.py -> build/bdist.linux-armv7l/wheel/./topaz 2026-05-11T20:27:08,524 creating build/bdist.linux-armv7l/wheel/topaz/model 2026-05-11T20:27:08,525 copying build/lib/topaz/model/factory.py -> build/bdist.linux-armv7l/wheel/./topaz/model 2026-05-11T20:27:08,527 copying build/lib/topaz/model/utils.py -> build/bdist.linux-armv7l/wheel/./topaz/model 2026-05-11T20:27:08,530 copying build/lib/topaz/model/classifier.py -> build/bdist.linux-armv7l/wheel/./topaz/model 2026-05-11T20:27:08,532 creating build/bdist.linux-armv7l/wheel/topaz/model/features 2026-05-11T20:27:08,533 copying build/lib/topaz/model/features/basic.py -> build/bdist.linux-armv7l/wheel/./topaz/model/features 2026-05-11T20:27:08,535 copying build/lib/topaz/model/features/densenet.py -> build/bdist.linux-armv7l/wheel/./topaz/model/features 2026-05-11T20:27:08,537 copying build/lib/topaz/model/features/__init__.py -> build/bdist.linux-armv7l/wheel/./topaz/model/features 2026-05-11T20:27:08,538 copying build/lib/topaz/model/features/msnet.py -> build/bdist.linux-armv7l/wheel/./topaz/model/features 2026-05-11T20:27:08,541 copying build/lib/topaz/model/features/resnet.py -> build/bdist.linux-armv7l/wheel/./topaz/model/features 2026-05-11T20:27:08,543 copying build/lib/topaz/model/__init__.py -> build/bdist.linux-armv7l/wheel/./topaz/model 2026-05-11T20:27:08,545 copying build/lib/topaz/model/generative.py -> build/bdist.linux-armv7l/wheel/./topaz/model 2026-05-11T20:27:08,547 copying build/lib/topaz/torch.py -> build/bdist.linux-armv7l/wheel/./topaz 2026-05-11T20:27:08,548 copying build/lib/topaz/extract.py -> build/bdist.linux-armv7l/wheel/./topaz 2026-05-11T20:27:08,551 copying build/lib/topaz/stats.py -> build/bdist.linux-armv7l/wheel/./topaz 2026-05-11T20:27:08,553 creating build/bdist.linux-armv7l/wheel/topaz/commands 2026-05-11T20:27:08,554 copying build/lib/topaz/commands/train_test_split.py -> build/bdist.linux-armv7l/wheel/./topaz/commands 2026-05-11T20:27:08,557 copying build/lib/topaz/commands/normalize.py -> build/bdist.linux-armv7l/wheel/./topaz/commands 2026-05-11T20:27:08,558 copying build/lib/topaz/commands/denoise3d.py -> build/bdist.linux-armv7l/wheel/./topaz/commands 2026-05-11T20:27:08,561 copying build/lib/topaz/commands/scale_coordinates.py -> build/bdist.linux-armv7l/wheel/./topaz/commands 2026-05-11T20:27:08,562 copying build/lib/topaz/commands/star_to_coordinates.py -> build/bdist.linux-armv7l/wheel/./topaz/commands 2026-05-11T20:27:08,564 copying build/lib/topaz/commands/convert.py -> build/bdist.linux-armv7l/wheel/./topaz/commands 2026-05-11T20:27:08,566 copying build/lib/topaz/commands/gui.py -> build/bdist.linux-armv7l/wheel/./topaz/commands 2026-05-11T20:27:08,568 copying build/lib/topaz/commands/split.py -> build/bdist.linux-armv7l/wheel/./topaz/commands 2026-05-11T20:27:08,570 copying build/lib/topaz/commands/coordinates_to_boxes.py -> build/bdist.linux-armv7l/wheel/./topaz/commands 2026-05-11T20:27:08,572 copying build/lib/topaz/commands/boxes_to_coordinates.py -> build/bdist.linux-armv7l/wheel/./topaz/commands 2026-05-11T20:27:08,574 copying build/lib/topaz/commands/preprocess.py -> build/bdist.linux-armv7l/wheel/./topaz/commands 2026-05-11T20:27:08,576 copying build/lib/topaz/commands/train.py -> build/bdist.linux-armv7l/wheel/./topaz/commands 2026-05-11T20:27:08,578 copying build/lib/topaz/commands/extract.py -> build/bdist.linux-armv7l/wheel/./topaz/commands 2026-05-11T20:27:08,580 copying build/lib/topaz/commands/precision_recall_curve.py -> build/bdist.linux-armv7l/wheel/./topaz/commands 2026-05-11T20:27:08,582 copying build/lib/topaz/commands/__init__.py -> build/bdist.linux-armv7l/wheel/./topaz/commands 2026-05-11T20:27:08,583 copying build/lib/topaz/commands/downsample.py -> build/bdist.linux-armv7l/wheel/./topaz/commands 2026-05-11T20:27:08,585 copying build/lib/topaz/commands/star_particles_threshold.py -> build/bdist.linux-armv7l/wheel/./topaz/commands 2026-05-11T20:27:08,587 copying build/lib/topaz/commands/coordinates_to_star.py -> build/bdist.linux-armv7l/wheel/./topaz/commands 2026-05-11T20:27:08,588 copying build/lib/topaz/commands/coordinates_to_eman2_json.py -> build/bdist.linux-armv7l/wheel/./topaz/commands 2026-05-11T20:27:08,590 copying build/lib/topaz/commands/segment.py -> build/bdist.linux-armv7l/wheel/./topaz/commands 2026-05-11T20:27:08,592 copying build/lib/topaz/commands/denoise.py -> build/bdist.linux-armv7l/wheel/./topaz/commands 2026-05-11T20:27:08,595 copying build/lib/topaz/commands/particle_stack.py -> build/bdist.linux-armv7l/wheel/./topaz/commands 2026-05-11T20:27:08,597 copying build/lib/topaz/metrics.py -> build/bdist.linux-armv7l/wheel/./topaz 2026-05-11T20:27:08,599 creating build/bdist.linux-armv7l/wheel/topaz/pretrained 2026-05-11T20:27:08,601 creating build/bdist.linux-armv7l/wheel/topaz/pretrained/detector 2026-05-11T20:27:08,602 copying build/lib/topaz/pretrained/detector/resnet16_u64.sav -> build/bdist.linux-armv7l/wheel/./topaz/pretrained/detector 2026-05-11T20:27:08,710 copying build/lib/topaz/pretrained/detector/resnet8_u32.sav -> build/bdist.linux-armv7l/wheel/./topaz/pretrained/detector 2026-05-11T20:27:08,731 copying build/lib/topaz/pretrained/detector/resnet8_u64.sav -> build/bdist.linux-armv7l/wheel/./topaz/pretrained/detector 2026-05-11T20:27:08,803 copying build/lib/topaz/pretrained/detector/resnet16_u32.sav -> build/bdist.linux-armv7l/wheel/./topaz/pretrained/detector 2026-05-11T20:27:08,835 creating build/bdist.linux-armv7l/wheel/topaz/pretrained/denoise 2026-05-11T20:27:08,836 copying build/lib/topaz/pretrained/denoise/unet_small_L1_v0.2.2.sav -> build/bdist.linux-armv7l/wheel/./topaz/pretrained/denoise 2026-05-11T20:27:08,876 copying build/lib/topaz/pretrained/denoise/affine_L1_v0.2.2.sav -> build/bdist.linux-armv7l/wheel/./topaz/pretrained/denoise 2026-05-11T20:27:08,878 copying build/lib/topaz/pretrained/denoise/unet_L2_v0.2.1.sav -> build/bdist.linux-armv7l/wheel/./topaz/pretrained/denoise 2026-05-11T20:27:08,936 copying build/lib/topaz/pretrained/denoise/unet-3d-20a-v0.2.4.sav -> build/bdist.linux-armv7l/wheel/./topaz/pretrained/denoise 2026-05-11T20:27:09,112 copying build/lib/topaz/pretrained/denoise/fcnn_L1_v0.2.2.sav -> build/bdist.linux-armv7l/wheel/./topaz/pretrained/denoise 2026-05-11T20:27:09,145 copying build/lib/topaz/pretrained/denoise/unet-3d-10a-v0.2.4.sav -> build/bdist.linux-armv7l/wheel/./topaz/pretrained/denoise 2026-05-11T20:27:09,322 copying build/lib/topaz/pretrained/denoise/unet_L2_v0.2.2.sav -> build/bdist.linux-armv7l/wheel/./topaz/pretrained/denoise 2026-05-11T20:27:09,390 copying build/lib/topaz/__init__.py -> build/bdist.linux-armv7l/wheel/./topaz 2026-05-11T20:27:09,392 copying build/lib/topaz/training.py -> build/bdist.linux-armv7l/wheel/./topaz 2026-05-11T20:27:09,395 copying build/lib/topaz/denoise.py -> build/bdist.linux-armv7l/wheel/./topaz 2026-05-11T20:27:09,398 creating build/bdist.linux-armv7l/wheel/topaz/transform 2026-05-11T20:27:09,399 copying build/lib/topaz/transform/__init__.py -> build/bdist.linux-armv7l/wheel/./topaz/transform 2026-05-11T20:27:09,401 copying build/lib/topaz/transform/scaled_gaussian_mixture.py -> build/bdist.linux-armv7l/wheel/./topaz/transform 2026-05-11T20:27:09,403 copying build/lib/topaz/predict.py -> build/bdist.linux-armv7l/wheel/./topaz 2026-05-11T20:27:09,405 creating build/bdist.linux-armv7l/wheel/topaz/gui 2026-05-11T20:27:09,406 copying build/lib/topaz/gui/topaz.html -> build/bdist.linux-armv7l/wheel/./topaz/gui 2026-05-11T20:27:09,417 running install_egg_info 2026-05-11T20:27:09,422 Copying topaz_em.egg-info to build/bdist.linux-armv7l/wheel/./topaz_em-0.3.20-py3.11.egg-info 2026-05-11T20:27:09,434 running install_scripts 2026-05-11T20:27:09,447 creating build/bdist.linux-armv7l/wheel/topaz_em-0.3.20.dist-info/WHEEL 2026-05-11T20:27:09,449 creating '/tmp/pip-wheel-t0_g8ex9/.tmp-2l_45mo6/topaz_em-0.3.20-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-05-11T20:27:09,452 adding 'topaz/__init__.py' 2026-05-11T20:27:09,453 adding 'topaz/_version.py' 2026-05-11T20:27:09,454 adding 'topaz/algorithms.py' 2026-05-11T20:27:09,456 adding 'topaz/cuda.py' 2026-05-11T20:27:09,459 adding 'topaz/denoise.py' 2026-05-11T20:27:09,461 adding 'topaz/extract.py' 2026-05-11T20:27:09,463 adding 'topaz/filters.py' 2026-05-11T20:27:09,473 adding 'topaz/main.py' 2026-05-11T20:27:09,475 adding 'topaz/methods.py' 2026-05-11T20:27:09,477 adding 'topaz/metrics.py' 2026-05-11T20:27:09,478 adding 'topaz/mrc.py' 2026-05-11T20:27:09,479 adding 'topaz/predict.py' 2026-05-11T20:27:09,481 adding 'topaz/stats.py' 2026-05-11T20:27:09,483 adding 'topaz/torch.py' 2026-05-11T20:27:09,487 adding 'topaz/training.py' 2026-05-11T20:27:09,489 adding 'topaz/commands/__init__.py' 2026-05-11T20:27:09,490 adding 'topaz/commands/boxes_to_coordinates.py' 2026-05-11T20:27:09,492 adding 'topaz/commands/convert.py' 2026-05-11T20:27:09,493 adding 'topaz/commands/coordinates_to_boxes.py' 2026-05-11T20:27:09,494 adding 'topaz/commands/coordinates_to_eman2_json.py' 2026-05-11T20:27:09,495 adding 'topaz/commands/coordinates_to_star.py' 2026-05-11T20:27:09,497 adding 'topaz/commands/denoise.py' 2026-05-11T20:27:09,499 adding 'topaz/commands/denoise3d.py' 2026-05-11T20:27:09,500 adding 'topaz/commands/downsample.py' 2026-05-11T20:27:09,501 adding 'topaz/commands/extract.py' 2026-05-11T20:27:09,502 adding 'topaz/commands/gui.py' 2026-05-11T20:27:09,504 adding 'topaz/commands/normalize.py' 2026-05-11T20:27:09,505 adding 'topaz/commands/particle_stack.py' 2026-05-11T20:27:09,506 adding 'topaz/commands/precision_recall_curve.py' 2026-05-11T20:27:09,507 adding 'topaz/commands/preprocess.py' 2026-05-11T20:27:09,509 adding 'topaz/commands/scale_coordinates.py' 2026-05-11T20:27:09,510 adding 'topaz/commands/segment.py' 2026-05-11T20:27:09,511 adding 'topaz/commands/split.py' 2026-05-11T20:27:09,512 adding 'topaz/commands/star_particles_threshold.py' 2026-05-11T20:27:09,513 adding 'topaz/commands/star_to_coordinates.py' 2026-05-11T20:27:09,515 adding 'topaz/commands/train.py' 2026-05-11T20:27:09,516 adding 'topaz/commands/train_test_split.py' 2026-05-11T20:27:09,518 adding 'topaz/denoising/__init__.py' 2026-05-11T20:27:09,521 adding 'topaz/denoising/datasets.py' 2026-05-11T20:27:09,523 adding 'topaz/denoising/models.py' 2026-05-11T20:27:09,578 adding 'topaz/gui/topaz.html' 2026-05-11T20:27:09,583 adding 'topaz/model/__init__.py' 2026-05-11T20:27:09,584 adding 'topaz/model/classifier.py' 2026-05-11T20:27:09,586 adding 'topaz/model/factory.py' 2026-05-11T20:27:09,587 adding 'topaz/model/generative.py' 2026-05-11T20:27:09,589 adding 'topaz/model/utils.py' 2026-05-11T20:27:09,590 adding 'topaz/model/features/__init__.py' 2026-05-11T20:27:09,591 adding 'topaz/model/features/basic.py' 2026-05-11T20:27:09,593 adding 'topaz/model/features/densenet.py' 2026-05-11T20:27:09,595 adding 'topaz/model/features/msnet.py' 2026-05-11T20:27:09,597 adding 'topaz/model/features/resnet.py' 2026-05-11T20:27:09,599 adding 'topaz/pretrained/denoise/affine_L1_v0.2.2.sav' 2026-05-11T20:27:09,903 adding 'topaz/pretrained/denoise/fcnn_L1_v0.2.2.sav' 2026-05-11T20:27:11,687 adding 'topaz/pretrained/denoise/unet-3d-10a-v0.2.4.sav' 2026-05-11T20:27:13,526 adding 'topaz/pretrained/denoise/unet-3d-20a-v0.2.4.sav' 2026-05-11T20:27:14,188 adding 'topaz/pretrained/denoise/unet_L2_v0.2.1.sav' 2026-05-11T20:27:14,891 adding 'topaz/pretrained/denoise/unet_L2_v0.2.2.sav' 2026-05-11T20:27:15,318 adding 'topaz/pretrained/denoise/unet_small_L1_v0.2.2.sav' 2026-05-11T20:27:15,612 adding 'topaz/pretrained/detector/resnet16_u32.sav' 2026-05-11T20:27:16,732 adding 'topaz/pretrained/detector/resnet16_u64.sav' 2026-05-11T20:27:16,977 adding 'topaz/pretrained/detector/resnet8_u32.sav' 2026-05-11T20:27:17,777 adding 'topaz/pretrained/detector/resnet8_u64.sav' 2026-05-11T20:27:17,811 adding 'topaz/transform/__init__.py' 2026-05-11T20:27:17,813 adding 'topaz/transform/scaled_gaussian_mixture.py' 2026-05-11T20:27:17,815 adding 'topaz/utils/__init__.py' 2026-05-11T20:27:17,817 adding 'topaz/utils/conversions.py' 2026-05-11T20:27:17,819 adding 'topaz/utils/files.py' 2026-05-11T20:27:17,821 adding 'topaz/utils/image.py' 2026-05-11T20:27:17,823 adding 'topaz/utils/picks.py' 2026-05-11T20:27:17,824 adding 'topaz/utils/printing.py' 2026-05-11T20:27:17,826 adding 'topaz/utils/star.py' 2026-05-11T20:27:17,828 adding 'topaz/utils/data/__init__.py' 2026-05-11T20:27:17,829 adding 'topaz/utils/data/coordinates.py' 2026-05-11T20:27:17,832 adding 'topaz/utils/data/loader.py' 2026-05-11T20:27:17,834 adding 'topaz/utils/data/memory_mapped_data.py' 2026-05-11T20:27:17,836 adding 'topaz/utils/data/partition.py' 2026-05-11T20:27:17,838 adding 'topaz/utils/data/sampler.py' 2026-05-11T20:27:17,840 adding 'topaz/utils/data/train_test_split_micrographs.py' 2026-05-11T20:27:17,848 adding 'topaz_em-0.3.20.dist-info/licenses/LICENSE' 2026-05-11T20:27:17,852 adding 'topaz_em-0.3.20.dist-info/METADATA' 2026-05-11T20:27:17,853 adding 'topaz_em-0.3.20.dist-info/WHEEL' 2026-05-11T20:27:17,855 adding 'topaz_em-0.3.20.dist-info/entry_points.txt' 2026-05-11T20:27:17,856 adding 'topaz_em-0.3.20.dist-info/top_level.txt' 2026-05-11T20:27:17,858 adding 'topaz_em-0.3.20.dist-info/RECORD' 2026-05-11T20:27:18,345 removing build/bdist.linux-armv7l/wheel 2026-05-11T20:27:18,487 Building wheel for topaz-em (pyproject.toml): finished with status 'done' 2026-05-11T20:27:19,481 Created wheel for topaz-em: filename=topaz_em-0.3.20-py3-none-any.whl size=48213000 sha256=0e464e423e9b9c9c1b02c0173b9ab22c48018c4f363c4371b975ab83257f8cf8 2026-05-11T20:27:19,482 Stored in directory: /tmp/pip-ephem-wheel-cache-rmd8nfj3/wheels/71/c8/52/94b8f6e1303a63f1d4bb2a2c305a2041f680e0b5fc7187f3d9 2026-05-11T20:27:19,516 Successfully built topaz-em 2026-05-11T20:27:20,625 Removed build tracker: '/tmp/pip-build-tracker-f5l8womv'