2026-05-13T17:05:35,183 Created temporary directory: /tmp/pip-ephem-wheel-cache-7k00yi3l 2026-05-13T17:05:35,185 Created temporary directory: /tmp/pip-build-tracker-2_4n8dji 2026-05-13T17:05:35,186 Initialized build tracking at /tmp/pip-build-tracker-2_4n8dji 2026-05-13T17:05:35,186 Created build tracker: /tmp/pip-build-tracker-2_4n8dji 2026-05-13T17:05:35,186 Entered build tracker: /tmp/pip-build-tracker-2_4n8dji 2026-05-13T17:05:35,187 Created temporary directory: /tmp/pip-wheel-u8rkug6h 2026-05-13T17:05:35,190 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-05-13T17:05:35,192 Created temporary directory: /tmp/pip-ephem-wheel-cache-x137zxj2 2026-05-13T17:05:35,214 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-05-13T17:05:35,217 2 location(s) to search for versions of skimgpt: 2026-05-13T17:05:35,217 * https://pypi.org/simple/skimgpt/ 2026-05-13T17:05:35,217 * https://www.piwheels.org/simple/skimgpt/ 2026-05-13T17:05:35,218 Fetching project page and analyzing links: https://pypi.org/simple/skimgpt/ 2026-05-13T17:05:35,219 Getting page https://pypi.org/simple/skimgpt/ 2026-05-13T17:05:35,220 Found index url https://pypi.org/simple 2026-05-13T17:05:35,447 Fetched page https://pypi.org/simple/skimgpt/ as application/vnd.pypi.simple.v1+json 2026-05-13T17:05:35,452 Skipping link: No binaries permitted for skimgpt: https://files.pythonhosted.org/packages/5b/e4/159fa6d31e797670c16a966f329e887553320fd41121ecbc37f1f42a927b/skimgpt-1.0.0-py3-none-any.whl (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-13T17:05:35,453 Found link https://files.pythonhosted.org/packages/4d/9e/f1e24804429e7da0e9280b116b97ba5810a130b52dd9ccecceadd6ccf55e/skimgpt-1.0.0.tar.gz (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10), version: 1.0.0 2026-05-13T17:05:35,454 Skipping link: No binaries permitted for skimgpt: https://files.pythonhosted.org/packages/7c/53/cc52c8549904b6c89d007f1068a31346c3e75f09cbbc90a8189e4f60f874/skimgpt-1.0.5-py3-none-any.whl (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-13T17:05:35,455 Found link https://files.pythonhosted.org/packages/38/40/2a659285343186f5bb160e4163f8f4e5b10687be47c4546ad4a8d3c6c16e/skimgpt-1.0.5.tar.gz (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10), version: 1.0.5 2026-05-13T17:05:35,455 Skipping link: No binaries permitted for skimgpt: https://files.pythonhosted.org/packages/ab/06/547b283132634bdd63656d313a025913d71ee5b1d612f3bfcc2d98331b99/skimgpt-1.0.6-py3-none-any.whl (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-13T17:05:35,456 Found link https://files.pythonhosted.org/packages/e4/49/56dc12f28a9a69bec4368adfa335368866c377cf787db7cff12019293df8/skimgpt-1.0.6.tar.gz (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10), version: 1.0.6 2026-05-13T17:05:35,457 Skipping link: No binaries permitted for skimgpt: https://files.pythonhosted.org/packages/36/a3/b40a6e16d6d7e25fcf2945fbc1c4d449933135d27a10f649b276f62ab304/skimgpt-1.1-py3-none-any.whl (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-13T17:05:35,458 Found link https://files.pythonhosted.org/packages/85/01/d401992a768ff3495f5e69595ef2fe1fd7f8c7dc5c3c433237cdafd0769e/skimgpt-1.1.tar.gz (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10), version: 1.1 2026-05-13T17:05:35,459 Skipping link: No binaries permitted for skimgpt: https://files.pythonhosted.org/packages/80/50/375197c9b2b61c37e2b8d8cd33499efdaaf60c1e0909dc5b8642ab27dfa8/skimgpt-1.2-py3-none-any.whl (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-13T17:05:35,460 Found link https://files.pythonhosted.org/packages/58/fb/fb5ef967d884a2fbf8328f2f83d016a56044c34950ab8b08e638fea90bec/skimgpt-1.2.tar.gz (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10), version: 1.2 2026-05-13T17:05:35,460 Skipping link: No binaries permitted for skimgpt: https://files.pythonhosted.org/packages/ce/3d/bcd1dfe57b3ee8c801068f70b93a0ec837f223c9ba58579fcf5e37f5f3e5/skimgpt-2.0.0-py3-none-any.whl (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-13T17:05:35,462 Found link https://files.pythonhosted.org/packages/42/85/156a9d7f9d57005e8bdee47a32d8a03e67c8945b2aa566f5fe69358a91b7/skimgpt-2.0.0.tar.gz (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10), version: 2.0.0 2026-05-13T17:05:35,462 Skipping link: No binaries permitted for skimgpt: https://files.pythonhosted.org/packages/65/51/2ba8c6987885f5fe0d82a0a1ab74c7fbd2dfb314b6cb3bb31925b08f1b8a/skimgpt-2.0.1-py3-none-any.whl (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-13T17:05:35,463 Found link https://files.pythonhosted.org/packages/ed/db/eacff4a9448c070b51b770a6c2f701fb1b2d837b0aea32ae7a08abe612f4/skimgpt-2.0.1.tar.gz (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10), version: 2.0.1 2026-05-13T17:05:35,464 Skipping link: No binaries permitted for skimgpt: https://files.pythonhosted.org/packages/1f/74/f03fc03f92872faaaae646a7a32cda4c689b4a898282ac67453e42b431d4/skimgpt-2.0.2-py3-none-any.whl (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-13T17:05:35,464 Found link https://files.pythonhosted.org/packages/ba/7a/a2a60fd5909477a7a2ea3f426c4fc018255de73507a1a00c5cf194dd5a70/skimgpt-2.0.2.tar.gz (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10), version: 2.0.2 2026-05-13T17:05:35,465 Skipping link: No binaries permitted for skimgpt: https://files.pythonhosted.org/packages/41/df/aa4d2bb2c2e59975ad7201c45e2ed0fd4b2a551ef9d26ef2a42712b8e6e3/skimgpt-2.0.3-py3-none-any.whl (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-13T17:05:35,466 Found link https://files.pythonhosted.org/packages/a7/64/d1b8e1d7ed026d6a18876525b616aa86575b8766ca6175b75b21793253a6/skimgpt-2.0.3.tar.gz (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10), version: 2.0.3 2026-05-13T17:05:35,466 Skipping link: No binaries permitted for skimgpt: https://files.pythonhosted.org/packages/5c/e4/fd7ed50d6b4aee928ab42f6e9ea4e8c8d7e39362ada86c59026b0057c5be/skimgpt-2.1-py3-none-any.whl (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-13T17:05:35,467 Found link https://files.pythonhosted.org/packages/41/06/f4bd1b81d7678d3fe7c66cb06b977a45e8b9be03354501ee99e3a9aa6b12/skimgpt-2.1.tar.gz (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10), version: 2.1 2026-05-13T17:05:35,468 Fetching project page and analyzing links: https://www.piwheels.org/simple/skimgpt/ 2026-05-13T17:05:35,469 Getting page https://www.piwheels.org/simple/skimgpt/ 2026-05-13T17:05:35,470 Found index url https://www.piwheels.org/simple 2026-05-13T17:05:35,658 Fetched page https://www.piwheels.org/simple/skimgpt/ as text/html 2026-05-13T17:05:35,662 Skipping link: No binaries permitted for skimgpt: https://www.piwheels.org/simple/skimgpt/skimgpt-2.1-py3-none-any.whl#sha256=95111b5d41f51f096d7581f210e2fcfab5b4956c22d52c6edc9342ddf4f886b8 (from https://www.piwheels.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-13T17:05:35,663 Skipping link: No binaries permitted for skimgpt: https://archive1.piwheels.org/simple/skimgpt/skimgpt-2.0.1-py3-none-any.whl#sha256=7facf52ed40df5f12628d4a87082df406a7a4d6d4547516d873870760e21790f (from https://www.piwheels.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-13T17:05:35,663 Skipping link: No binaries permitted for skimgpt: https://archive1.piwheels.org/simple/skimgpt/skimgpt-2.0.0-py3-none-any.whl#sha256=02e3c90f86cd6a5371cd622874f4f57fd3679d08cb1a2a1b5cf236552e9b003c (from https://www.piwheels.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-13T17:05:35,664 Skipping link: No binaries permitted for skimgpt: https://archive1.piwheels.org/simple/skimgpt/skimgpt-1.2-py3-none-any.whl#sha256=b4c4adbd30536892239d0d70fe47125b6e254968cae2cc74d10b71df90f3f55e (from https://www.piwheels.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-13T17:05:35,665 Skipping link: No binaries permitted for skimgpt: https://archive1.piwheels.org/simple/skimgpt/skimgpt-1.1-py3-none-any.whl#sha256=480c4ea401f7b080c2c4f06dbde341d6c4dba2629b04b574e64e4fe18979326b (from https://www.piwheels.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-13T17:05:35,666 Skipping link: No binaries permitted for skimgpt: https://archive1.piwheels.org/simple/skimgpt/skimgpt-1.0.6-py3-none-any.whl#sha256=a974ad27fdafa96f8e13df016211ba558c585668756dc22dc6bab39e6ad87f5c (from https://www.piwheels.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-13T17:05:35,666 Skipping link: No binaries permitted for skimgpt: https://archive1.piwheels.org/simple/skimgpt/skimgpt-1.0.5-py3-none-any.whl#sha256=4e4532d70e84030ef8e4886eadc21b1bec5f8478e56e5178ffe3e4b10d0e5872 (from https://www.piwheels.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-13T17:05:35,666 Skipping link: No binaries permitted for skimgpt: https://archive1.piwheels.org/simple/skimgpt/skimgpt-1.0.0-py3-none-any.whl#sha256=4d72bc94b7b7efab9758f02986de73ee8e6624597343dba106c538245c978553 (from https://www.piwheels.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-13T17:05:35,667 Skipping link: not a file: https://www.piwheels.org/simple/skimgpt/ 2026-05-13T17:05:35,667 Skipping link: not a file: https://pypi.org/simple/skimgpt/ 2026-05-13T17:05:35,687 Given no hashes to check 1 links for project 'skimgpt': discarding no candidates 2026-05-13T17:05:35,705 Collecting skimgpt==2.0.2 2026-05-13T17:05:35,708 Created temporary directory: /tmp/pip-unpack-69j07_4y 2026-05-13T17:05:35,941 Downloading skimgpt-2.0.2.tar.gz (234 kB) 2026-05-13T17:05:36,188 Added skimgpt==2.0.2 from https://files.pythonhosted.org/packages/ba/7a/a2a60fd5909477a7a2ea3f426c4fc018255de73507a1a00c5cf194dd5a70/skimgpt-2.0.2.tar.gz to build tracker '/tmp/pip-build-tracker-2_4n8dji' 2026-05-13T17:05:36,197 Created temporary directory: /tmp/pip-build-env-01om6rr3 2026-05-13T17:05:36,201 Installing build dependencies: started 2026-05-13T17:05:36,202 Running command pip subprocess to install build dependencies 2026-05-13T17:05:37,316 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-05-13T17:05:37,768 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-05-13T17:05:37,790 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-05-13T17:05:39,589 Collecting setuptools>=45 2026-05-13T17:05:39,590 Obtaining dependency information for setuptools>=45 from https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl.metadata 2026-05-13T17:05:39,608 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl.metadata (6.5 kB) 2026-05-13T17:05:39,842 Collecting wheel 2026-05-13T17:05:39,843 Obtaining dependency information for wheel from https://www.piwheels.org/simple/wheel/wheel-0.47.0-py3-none-any.whl.metadata 2026-05-13T17:05:39,856 Using cached https://www.piwheels.org/simple/wheel/wheel-0.47.0-py3-none-any.whl.metadata (2.3 kB) 2026-05-13T17:05:40,195 Collecting setuptools_scm[toml]>=6.2 2026-05-13T17:05:40,196 Obtaining dependency information for setuptools_scm[toml]>=6.2 from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl.metadata 2026-05-13T17:05:40,210 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl.metadata (6.5 kB) 2026-05-13T17:05:40,220 Discarding https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl#sha256=600c37b3fea2bb517f59d76792adae856d0b5ce7735b186e4cde804375251321 (from https://www.piwheels.org/simple/setuptools-scm/) (requires-python:>=3.10): Requested setuptools_scm>=6.2 from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl#sha256=600c37b3fea2bb517f59d76792adae856d0b5ce7735b186e4cde804375251321 has inconsistent Name: expected 'setuptools_scm', but metadata has 'setuptools-scm' 2026-05-13T17:05:40,243 Using cached setuptools_scm-10.0.5-py3-none-any.whl (21 kB) 2026-05-13T17:05:40,427 Collecting packaging>=24.0 2026-05-13T17:05:40,428 Obtaining dependency information for packaging>=24.0 from https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata 2026-05-13T17:05:40,442 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata (3.5 kB) 2026-05-13T17:05:40,525 Collecting vcs-versioning>=1.0.0.dev0 2026-05-13T17:05:40,526 Obtaining dependency information for vcs-versioning>=1.0.0.dev0 from https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl.metadata 2026-05-13T17:05:40,542 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl.metadata (1.6 kB) 2026-05-13T17:05:40,780 Using cached https://www.piwheels.org/simple/wheel/wheel-0.47.0-py3-none-any.whl (32 kB) 2026-05-13T17:05:40,798 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB) 2026-05-13T17:05:40,822 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl (79 kB) 2026-05-13T17:05:40,916 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-05-13T17:05:40,957 Using cached https://www.piwheels.org/simple/wheel/wheel-0.47.0-py3-none-any.whl (32 kB) 2026-05-13T17:05:40,980 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB) 2026-05-13T17:05:41,004 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl (79 kB) 2026-05-13T17:05:41,108 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-05-13T17:05:43,872 Installing collected packages: setuptools, packaging, wheel, vcs-versioning, setuptools_scm 2026-05-13T17:05:47,329 Creating /tmp/pip-build-env-01om6rr3/overlay/local/bin 2026-05-13T17:05:47,331 changing mode of /tmp/pip-build-env-01om6rr3/overlay/local/bin/wheel to 755 2026-05-13T17:05:47,672 changing mode of /tmp/pip-build-env-01om6rr3/overlay/local/bin/vcs-versioning to 755 2026-05-13T17:05:47,782 changing mode of /tmp/pip-build-env-01om6rr3/overlay/local/bin/setuptools-scm to 755 2026-05-13T17:05:47,817 Successfully installed packaging-26.2 setuptools-82.0.1 setuptools_scm-10.0.5 vcs-versioning-1.1.1 wheel-0.47.0 2026-05-13T17:05:48,118 Installing build dependencies: finished with status 'done' 2026-05-13T17:05:48,124 Getting requirements to build wheel: started 2026-05-13T17:05:48,125 Running command Getting requirements to build wheel 2026-05-13T17:05:48,831 /tmp/pip-build-env-01om6rr3/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-05-13T17:05:48,832 !! 2026-05-13T17:05:48,833 ******************************************************************************** 2026-05-13T17:05:48,833 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-05-13T17:05:48,834 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-05-13T17:05:48,835 or your builds will no longer be supported. 2026-05-13T17:05:48,836 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-13T17:05:48,837 ******************************************************************************** 2026-05-13T17:05:48,838 !! 2026-05-13T17:05:48,838 corresp(dist, value, root_dir) 2026-05-13T17:05:48,908 /tmp/pip-build-env-01om6rr3/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-13T17:05:48,909 !! 2026-05-13T17:05:48,910 ******************************************************************************** 2026-05-13T17:05:48,910 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-13T17:05:48,911 License :: OSI Approved :: MIT License 2026-05-13T17:05:48,912 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-13T17:05:48,913 ******************************************************************************** 2026-05-13T17:05:48,914 !! 2026-05-13T17:05:48,914 dist._finalize_license_expression() 2026-05-13T17:05:48,915 /tmp/pip-build-env-01om6rr3/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-13T17:05:48,915 !! 2026-05-13T17:05:48,916 ******************************************************************************** 2026-05-13T17:05:48,917 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-13T17:05:48,918 License :: OSI Approved :: MIT License 2026-05-13T17:05:48,919 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-13T17:05:48,919 ******************************************************************************** 2026-05-13T17:05:48,920 !! 2026-05-13T17:05:48,921 self._finalize_license_expression() 2026-05-13T17:05:48,922 running egg_info 2026-05-13T17:05:48,930 writing skimgpt.egg-info/PKG-INFO 2026-05-13T17:05:48,936 writing dependency_links to skimgpt.egg-info/dependency_links.txt 2026-05-13T17:05:48,938 writing entry points to skimgpt.egg-info/entry_points.txt 2026-05-13T17:05:48,941 writing requirements to skimgpt.egg-info/requires.txt 2026-05-13T17:05:48,943 writing top-level names to skimgpt.egg-info/top_level.txt 2026-05-13T17:05:48,989 /tmp/pip-build-env-01om6rr3/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-05-13T17:05:48,990 return get_active_overrides().subprocess_timeout 2026-05-13T17:05:48,997 listing git files failed - pretending there aren't any 2026-05-13T17:05:49,002 reading manifest file 'skimgpt.egg-info/SOURCES.txt' 2026-05-13T17:05:49,008 reading manifest template 'MANIFEST.in' 2026-05-13T17:05:49,010 warning: no files found matching 'main.py' 2026-05-13T17:05:49,011 warning: no files found matching 'run_multiple_analyses.sh' 2026-05-13T17:05:49,012 warning: no files found matching '*.py' under directory 'src' 2026-05-13T17:05:49,013 warning: no files found matching '*.sh' under directory 'src' 2026-05-13T17:05:49,015 warning: no previously-included files found matching 'test/*' 2026-05-13T17:05:49,016 warning: no previously-included files found matching '.git*' 2026-05-13T17:05:49,016 warning: no previously-included files found matching '.pytest_cache' 2026-05-13T17:05:49,017 warning: no previously-included files found matching '__pycache__' 2026-05-13T17:05:49,018 warning: no previously-included files found matching '*.pyc' 2026-05-13T17:05:49,018 warning: no previously-included files found matching '.ipynb_checkpoints' 2026-05-13T17:05:49,023 writing manifest file 'skimgpt.egg-info/SOURCES.txt' 2026-05-13T17:05:49,128 Getting requirements to build wheel: finished with status 'done' 2026-05-13T17:05:49,131 Created temporary directory: /tmp/pip-modern-metadata-iwc2t0fe 2026-05-13T17:05:49,134 Preparing metadata (pyproject.toml): started 2026-05-13T17:05:49,135 Running command Preparing metadata (pyproject.toml) 2026-05-13T17:05:49,810 /tmp/pip-build-env-01om6rr3/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-05-13T17:05:49,810 !! 2026-05-13T17:05:49,811 ******************************************************************************** 2026-05-13T17:05:49,812 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-05-13T17:05:49,813 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-05-13T17:05:49,813 or your builds will no longer be supported. 2026-05-13T17:05:49,814 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-13T17:05:49,815 ******************************************************************************** 2026-05-13T17:05:49,816 !! 2026-05-13T17:05:49,816 corresp(dist, value, root_dir) 2026-05-13T17:05:49,885 /tmp/pip-build-env-01om6rr3/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-13T17:05:49,886 !! 2026-05-13T17:05:49,887 ******************************************************************************** 2026-05-13T17:05:49,887 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-13T17:05:49,888 License :: OSI Approved :: MIT License 2026-05-13T17:05:49,890 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-13T17:05:49,890 ******************************************************************************** 2026-05-13T17:05:49,891 !! 2026-05-13T17:05:49,892 dist._finalize_license_expression() 2026-05-13T17:05:49,893 /tmp/pip-build-env-01om6rr3/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-13T17:05:49,893 !! 2026-05-13T17:05:49,895 ******************************************************************************** 2026-05-13T17:05:49,895 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-13T17:05:49,897 License :: OSI Approved :: MIT License 2026-05-13T17:05:49,898 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-13T17:05:49,898 ******************************************************************************** 2026-05-13T17:05:49,899 !! 2026-05-13T17:05:49,900 self._finalize_license_expression() 2026-05-13T17:05:49,901 running dist_info 2026-05-13T17:05:49,916 creating /tmp/pip-modern-metadata-iwc2t0fe/skimgpt.egg-info 2026-05-13T17:05:49,917 writing /tmp/pip-modern-metadata-iwc2t0fe/skimgpt.egg-info/PKG-INFO 2026-05-13T17:05:49,924 writing dependency_links to /tmp/pip-modern-metadata-iwc2t0fe/skimgpt.egg-info/dependency_links.txt 2026-05-13T17:05:49,925 writing entry points to /tmp/pip-modern-metadata-iwc2t0fe/skimgpt.egg-info/entry_points.txt 2026-05-13T17:05:49,929 writing requirements to /tmp/pip-modern-metadata-iwc2t0fe/skimgpt.egg-info/requires.txt 2026-05-13T17:05:49,930 writing top-level names to /tmp/pip-modern-metadata-iwc2t0fe/skimgpt.egg-info/top_level.txt 2026-05-13T17:05:49,932 writing manifest file '/tmp/pip-modern-metadata-iwc2t0fe/skimgpt.egg-info/SOURCES.txt' 2026-05-13T17:05:49,974 /tmp/pip-build-env-01om6rr3/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-05-13T17:05:49,975 return get_active_overrides().subprocess_timeout 2026-05-13T17:05:49,981 listing git files failed - pretending there aren't any 2026-05-13T17:05:49,986 reading manifest file '/tmp/pip-modern-metadata-iwc2t0fe/skimgpt.egg-info/SOURCES.txt' 2026-05-13T17:05:49,988 reading manifest template 'MANIFEST.in' 2026-05-13T17:05:49,989 warning: no files found matching 'main.py' 2026-05-13T17:05:49,990 warning: no files found matching 'run_multiple_analyses.sh' 2026-05-13T17:05:49,991 warning: no files found matching '*.py' under directory 'src' 2026-05-13T17:05:49,991 warning: no files found matching '*.sh' under directory 'src' 2026-05-13T17:05:49,993 warning: no previously-included files found matching 'test/*' 2026-05-13T17:05:49,994 warning: no previously-included files found matching '.git*' 2026-05-13T17:05:49,995 warning: no previously-included files found matching '.pytest_cache' 2026-05-13T17:05:49,996 warning: no previously-included files found matching '__pycache__' 2026-05-13T17:05:49,996 warning: no previously-included files found matching '*.pyc' 2026-05-13T17:05:49,997 warning: no previously-included files found matching '.ipynb_checkpoints' 2026-05-13T17:05:50,001 writing manifest file '/tmp/pip-modern-metadata-iwc2t0fe/skimgpt.egg-info/SOURCES.txt' 2026-05-13T17:05:50,003 creating '/tmp/pip-modern-metadata-iwc2t0fe/skimgpt-2.0.2.dist-info' 2026-05-13T17:05:50,136 Preparing metadata (pyproject.toml): finished with status 'done' 2026-05-13T17:05:50,142 Source in /tmp/pip-wheel-u8rkug6h/skimgpt_4cfc8789aa694523984b48397b3fbb4a has version 2.0.2, which satisfies requirement skimgpt==2.0.2 from https://files.pythonhosted.org/packages/ba/7a/a2a60fd5909477a7a2ea3f426c4fc018255de73507a1a00c5cf194dd5a70/skimgpt-2.0.2.tar.gz 2026-05-13T17:05:50,143 Removed skimgpt==2.0.2 from https://files.pythonhosted.org/packages/ba/7a/a2a60fd5909477a7a2ea3f426c4fc018255de73507a1a00c5cf194dd5a70/skimgpt-2.0.2.tar.gz from build tracker '/tmp/pip-build-tracker-2_4n8dji' 2026-05-13T17:05:50,149 Created temporary directory: /tmp/pip-unpack-4sfb_4y9 2026-05-13T17:05:50,149 Building wheels for collected packages: skimgpt 2026-05-13T17:05:50,154 Created temporary directory: /tmp/pip-wheel-9jluymgp 2026-05-13T17:05:50,155 Destination directory: /tmp/pip-wheel-9jluymgp 2026-05-13T17:05:50,157 Building wheel for skimgpt (pyproject.toml): started 2026-05-13T17:05:50,159 Running command Building wheel for skimgpt (pyproject.toml) 2026-05-13T17:05:50,833 /tmp/pip-build-env-01om6rr3/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-05-13T17:05:50,833 !! 2026-05-13T17:05:50,835 ******************************************************************************** 2026-05-13T17:05:50,835 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-05-13T17:05:50,836 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-05-13T17:05:50,837 or your builds will no longer be supported. 2026-05-13T17:05:50,838 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-13T17:05:50,838 ******************************************************************************** 2026-05-13T17:05:50,840 !! 2026-05-13T17:05:50,840 corresp(dist, value, root_dir) 2026-05-13T17:05:50,901 /tmp/pip-build-env-01om6rr3/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-13T17:05:50,901 !! 2026-05-13T17:05:50,903 ******************************************************************************** 2026-05-13T17:05:50,903 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-13T17:05:50,904 License :: OSI Approved :: MIT License 2026-05-13T17:05:50,905 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-13T17:05:50,906 ******************************************************************************** 2026-05-13T17:05:50,907 !! 2026-05-13T17:05:50,907 dist._finalize_license_expression() 2026-05-13T17:05:50,908 /tmp/pip-build-env-01om6rr3/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-13T17:05:50,908 !! 2026-05-13T17:05:50,909 ******************************************************************************** 2026-05-13T17:05:50,910 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-13T17:05:50,911 License :: OSI Approved :: MIT License 2026-05-13T17:05:50,912 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-13T17:05:50,912 ******************************************************************************** 2026-05-13T17:05:50,913 !! 2026-05-13T17:05:50,913 self._finalize_license_expression() 2026-05-13T17:05:50,914 running bdist_wheel 2026-05-13T17:05:50,933 running build 2026-05-13T17:05:50,933 running build_py 2026-05-13T17:05:50,935 creating build/lib/skimgpt 2026-05-13T17:05:50,938 copying skimgpt/pubmed_fetcher.py -> build/lib/skimgpt 2026-05-13T17:05:50,940 copying skimgpt/relevance_chtc.py -> build/lib/skimgpt 2026-05-13T17:05:50,943 copying skimgpt/relevance_helper.py -> build/lib/skimgpt 2026-05-13T17:05:50,945 copying skimgpt/main.py -> build/lib/skimgpt 2026-05-13T17:05:50,948 copying skimgpt/eval_JSON_results.py -> build/lib/skimgpt 2026-05-13T17:05:50,950 copying skimgpt/utils.py -> build/lib/skimgpt 2026-05-13T17:05:50,953 copying skimgpt/scoring_guidelines.py -> build/lib/skimgpt 2026-05-13T17:05:50,956 copying skimgpt/skim_and_km_api.py -> build/lib/skimgpt 2026-05-13T17:05:50,958 copying skimgpt/relevance_triton.py -> build/lib/skimgpt 2026-05-13T17:05:50,961 copying skimgpt/htcondor_helper.py -> build/lib/skimgpt 2026-05-13T17:05:50,963 copying skimgpt/classifier.py -> build/lib/skimgpt 2026-05-13T17:05:50,966 copying skimgpt/cost_estimator.py -> build/lib/skimgpt 2026-05-13T17:05:50,968 copying skimgpt/prompt_library.py -> build/lib/skimgpt 2026-05-13T17:05:50,971 copying skimgpt/triton_client.py -> build/lib/skimgpt 2026-05-13T17:05:50,973 copying skimgpt/retry.py -> build/lib/skimgpt 2026-05-13T17:05:50,975 copying skimgpt/__init__.py -> build/lib/skimgpt 2026-05-13T17:05:50,978 creating build/lib/skimgpt/visualization 2026-05-13T17:05:50,979 copying skimgpt/visualization/plot_hyp_stats.py -> build/lib/skimgpt/visualization 2026-05-13T17:05:50,981 copying skimgpt/visualization/hyp_stats.py -> build/lib/skimgpt/visualization 2026-05-13T17:05:50,984 copying skimgpt/visualization/plot_separate_runs.py -> build/lib/skimgpt/visualization 2026-05-13T17:05:50,987 copying skimgpt/visualization/__init__.py -> build/lib/skimgpt/visualization 2026-05-13T17:05:50,989 copying skimgpt/visualization/bayesian_ci.py -> build/lib/skimgpt/visualization 2026-05-13T17:05:50,991 running egg_info 2026-05-13T17:05:51,004 writing skimgpt.egg-info/PKG-INFO 2026-05-13T17:05:51,009 writing dependency_links to skimgpt.egg-info/dependency_links.txt 2026-05-13T17:05:51,011 writing entry points to skimgpt.egg-info/entry_points.txt 2026-05-13T17:05:51,014 writing requirements to skimgpt.egg-info/requires.txt 2026-05-13T17:05:51,015 writing top-level names to skimgpt.egg-info/top_level.txt 2026-05-13T17:05:51,050 /tmp/pip-build-env-01om6rr3/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-05-13T17:05:51,050 return get_active_overrides().subprocess_timeout 2026-05-13T17:05:51,057 listing git files failed - pretending there aren't any 2026-05-13T17:05:51,061 reading manifest file 'skimgpt.egg-info/SOURCES.txt' 2026-05-13T17:05:51,066 reading manifest template 'MANIFEST.in' 2026-05-13T17:05:51,067 warning: no files found matching 'main.py' 2026-05-13T17:05:51,068 warning: no files found matching 'run_multiple_analyses.sh' 2026-05-13T17:05:51,068 warning: no files found matching '*.py' under directory 'src' 2026-05-13T17:05:51,069 warning: no files found matching '*.sh' under directory 'src' 2026-05-13T17:05:51,070 warning: no previously-included files found matching 'test/*' 2026-05-13T17:05:51,071 warning: no previously-included files found matching '.git*' 2026-05-13T17:05:51,072 warning: no previously-included files found matching '.pytest_cache' 2026-05-13T17:05:51,072 warning: no previously-included files found matching '__pycache__' 2026-05-13T17:05:51,073 warning: no previously-included files found matching '*.pyc' 2026-05-13T17:05:51,074 warning: no previously-included files found matching '.ipynb_checkpoints' 2026-05-13T17:05:51,078 writing manifest file 'skimgpt.egg-info/SOURCES.txt' 2026-05-13T17:05:51,081 /tmp/pip-build-env-01om6rr3/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'skimgpt.visualization.example_data.CVD_HormonevsStatins' is absent from the `packages` configuration. 2026-05-13T17:05:51,082 !! 2026-05-13T17:05:51,083 ******************************************************************************** 2026-05-13T17:05:51,084 ############################ 2026-05-13T17:05:51,084 # Package would be ignored # 2026-05-13T17:05:51,085 ############################ 2026-05-13T17:05:51,085 Python recognizes 'skimgpt.visualization.example_data.CVD_HormonevsStatins' as an importable package[^1], 2026-05-13T17:05:51,086 but it is absent from setuptools' `packages` configuration. 2026-05-13T17:05:51,087 This leads to an ambiguous overall configuration. If you want to distribute this 2026-05-13T17:05:51,088 package, please make sure that 'skimgpt.visualization.example_data.CVD_HormonevsStatins' is explicitly added 2026-05-13T17:05:51,088 to the `packages` configuration field. 2026-05-13T17:05:51,089 Alternatively, you can also rely on setuptools' discovery methods 2026-05-13T17:05:51,090 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-05-13T17:05:51,091 instead of `find_packages(...)`/`find:`). 2026-05-13T17:05:51,092 You can read more about "package discovery" on setuptools documentation page: 2026-05-13T17:05:51,092 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-05-13T17:05:51,093 If you don't want 'skimgpt.visualization.example_data.CVD_HormonevsStatins' to be distributed and are 2026-05-13T17:05:51,094 already explicitly excluding 'skimgpt.visualization.example_data.CVD_HormonevsStatins' via 2026-05-13T17:05:51,095 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-05-13T17:05:51,095 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-05-13T17:05:51,096 combination with a more fine grained `package-data` configuration. 2026-05-13T17:05:51,097 You can read more about "package data files" on setuptools documentation page: 2026-05-13T17:05:51,098 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-05-13T17:05:51,099 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-05-13T17:05:51,100 even if it does not contain any `.py` files. 2026-05-13T17:05:51,100 On the other hand, currently there is no concept of package data 2026-05-13T17:05:51,101 directory, all directories are treated like packages. 2026-05-13T17:05:51,101 ******************************************************************************** 2026-05-13T17:05:51,102 !! 2026-05-13T17:05:51,102 check.warn(importable) 2026-05-13T17:05:51,103 /tmp/pip-build-env-01om6rr3/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'skimgpt.visualization.example_data.autism_GPvsVaccine' is absent from the `packages` configuration. 2026-05-13T17:05:51,103 !! 2026-05-13T17:05:51,104 ******************************************************************************** 2026-05-13T17:05:51,105 ############################ 2026-05-13T17:05:51,105 # Package would be ignored # 2026-05-13T17:05:51,105 ############################ 2026-05-13T17:05:51,106 Python recognizes 'skimgpt.visualization.example_data.autism_GPvsVaccine' as an importable package[^1], 2026-05-13T17:05:51,106 but it is absent from setuptools' `packages` configuration. 2026-05-13T17:05:51,107 This leads to an ambiguous overall configuration. If you want to distribute this 2026-05-13T17:05:51,107 package, please make sure that 'skimgpt.visualization.example_data.autism_GPvsVaccine' is explicitly added 2026-05-13T17:05:51,108 to the `packages` configuration field. 2026-05-13T17:05:51,109 Alternatively, you can also rely on setuptools' discovery methods 2026-05-13T17:05:51,109 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-05-13T17:05:51,110 instead of `find_packages(...)`/`find:`). 2026-05-13T17:05:51,110 You can read more about "package discovery" on setuptools documentation page: 2026-05-13T17:05:51,111 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-05-13T17:05:51,112 If you don't want 'skimgpt.visualization.example_data.autism_GPvsVaccine' to be distributed and are 2026-05-13T17:05:51,113 already explicitly excluding 'skimgpt.visualization.example_data.autism_GPvsVaccine' via 2026-05-13T17:05:51,113 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-05-13T17:05:51,114 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-05-13T17:05:51,115 combination with a more fine grained `package-data` configuration. 2026-05-13T17:05:51,115 You can read more about "package data files" on setuptools documentation page: 2026-05-13T17:05:51,116 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-05-13T17:05:51,118 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-05-13T17:05:51,119 even if it does not contain any `.py` files. 2026-05-13T17:05:51,119 On the other hand, currently there is no concept of package data 2026-05-13T17:05:51,120 directory, all directories are treated like packages. 2026-05-13T17:05:51,120 ******************************************************************************** 2026-05-13T17:05:51,121 !! 2026-05-13T17:05:51,122 check.warn(importable) 2026-05-13T17:05:51,123 /tmp/pip-build-env-01om6rr3/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'skimgpt.visualization.example_data.autism_microbiomeVsGP' is absent from the `packages` configuration. 2026-05-13T17:05:51,123 !! 2026-05-13T17:05:51,124 ******************************************************************************** 2026-05-13T17:05:51,124 ############################ 2026-05-13T17:05:51,125 # Package would be ignored # 2026-05-13T17:05:51,126 ############################ 2026-05-13T17:05:51,126 Python recognizes 'skimgpt.visualization.example_data.autism_microbiomeVsGP' as an importable package[^1], 2026-05-13T17:05:51,127 but it is absent from setuptools' `packages` configuration. 2026-05-13T17:05:51,128 This leads to an ambiguous overall configuration. If you want to distribute this 2026-05-13T17:05:51,128 package, please make sure that 'skimgpt.visualization.example_data.autism_microbiomeVsGP' is explicitly added 2026-05-13T17:05:51,129 to the `packages` configuration field. 2026-05-13T17:05:51,130 Alternatively, you can also rely on setuptools' discovery methods 2026-05-13T17:05:51,130 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-05-13T17:05:51,131 instead of `find_packages(...)`/`find:`). 2026-05-13T17:05:51,132 You can read more about "package discovery" on setuptools documentation page: 2026-05-13T17:05:51,132 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-05-13T17:05:51,134 If you don't want 'skimgpt.visualization.example_data.autism_microbiomeVsGP' to be distributed and are 2026-05-13T17:05:51,134 already explicitly excluding 'skimgpt.visualization.example_data.autism_microbiomeVsGP' via 2026-05-13T17:05:51,135 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-05-13T17:05:51,135 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-05-13T17:05:51,136 combination with a more fine grained `package-data` configuration. 2026-05-13T17:05:51,137 You can read more about "package data files" on setuptools documentation page: 2026-05-13T17:05:51,138 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-05-13T17:05:51,139 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-05-13T17:05:51,139 even if it does not contain any `.py` files. 2026-05-13T17:05:51,140 On the other hand, currently there is no concept of package data 2026-05-13T17:05:51,141 directory, all directories are treated like packages. 2026-05-13T17:05:51,141 ******************************************************************************** 2026-05-13T17:05:51,142 !! 2026-05-13T17:05:51,143 check.warn(importable) 2026-05-13T17:05:51,143 /tmp/pip-build-env-01om6rr3/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'skimgpt.visualization.example_data.autism_microbiomevsVax' is absent from the `packages` configuration. 2026-05-13T17:05:51,144 !! 2026-05-13T17:05:51,144 ******************************************************************************** 2026-05-13T17:05:51,145 ############################ 2026-05-13T17:05:51,146 # Package would be ignored # 2026-05-13T17:05:51,146 ############################ 2026-05-13T17:05:51,147 Python recognizes 'skimgpt.visualization.example_data.autism_microbiomevsVax' as an importable package[^1], 2026-05-13T17:05:51,147 but it is absent from setuptools' `packages` configuration. 2026-05-13T17:05:51,149 This leads to an ambiguous overall configuration. If you want to distribute this 2026-05-13T17:05:51,149 package, please make sure that 'skimgpt.visualization.example_data.autism_microbiomevsVax' is explicitly added 2026-05-13T17:05:51,150 to the `packages` configuration field. 2026-05-13T17:05:51,151 Alternatively, you can also rely on setuptools' discovery methods 2026-05-13T17:05:51,151 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-05-13T17:05:51,152 instead of `find_packages(...)`/`find:`). 2026-05-13T17:05:51,153 You can read more about "package discovery" on setuptools documentation page: 2026-05-13T17:05:51,155 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-05-13T17:05:51,156 If you don't want 'skimgpt.visualization.example_data.autism_microbiomevsVax' to be distributed and are 2026-05-13T17:05:51,156 already explicitly excluding 'skimgpt.visualization.example_data.autism_microbiomevsVax' via 2026-05-13T17:05:51,157 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-05-13T17:05:51,158 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-05-13T17:05:51,158 combination with a more fine grained `package-data` configuration. 2026-05-13T17:05:51,159 You can read more about "package data files" on setuptools documentation page: 2026-05-13T17:05:51,160 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-05-13T17:05:51,162 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-05-13T17:05:51,162 even if it does not contain any `.py` files. 2026-05-13T17:05:51,163 On the other hand, currently there is no concept of package data 2026-05-13T17:05:51,163 directory, all directories are treated like packages. 2026-05-13T17:05:51,164 ******************************************************************************** 2026-05-13T17:05:51,165 !! 2026-05-13T17:05:51,165 check.warn(importable) 2026-05-13T17:05:51,166 /tmp/pip-build-env-01om6rr3/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'skimgpt.visualization.example_data.cervical_cancer' is absent from the `packages` configuration. 2026-05-13T17:05:51,166 !! 2026-05-13T17:05:51,167 ******************************************************************************** 2026-05-13T17:05:51,168 ############################ 2026-05-13T17:05:51,168 # Package would be ignored # 2026-05-13T17:05:51,169 ############################ 2026-05-13T17:05:51,169 Python recognizes 'skimgpt.visualization.example_data.cervical_cancer' as an importable package[^1], 2026-05-13T17:05:51,169 but it is absent from setuptools' `packages` configuration. 2026-05-13T17:05:51,170 This leads to an ambiguous overall configuration. If you want to distribute this 2026-05-13T17:05:51,171 package, please make sure that 'skimgpt.visualization.example_data.cervical_cancer' is explicitly added 2026-05-13T17:05:51,171 to the `packages` configuration field. 2026-05-13T17:05:51,172 Alternatively, you can also rely on setuptools' discovery methods 2026-05-13T17:05:51,173 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-05-13T17:05:51,174 instead of `find_packages(...)`/`find:`). 2026-05-13T17:05:51,175 You can read more about "package discovery" on setuptools documentation page: 2026-05-13T17:05:51,176 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-05-13T17:05:51,177 If you don't want 'skimgpt.visualization.example_data.cervical_cancer' to be distributed and are 2026-05-13T17:05:51,177 already explicitly excluding 'skimgpt.visualization.example_data.cervical_cancer' via 2026-05-13T17:05:51,178 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-05-13T17:05:51,178 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-05-13T17:05:51,179 combination with a more fine grained `package-data` configuration. 2026-05-13T17:05:51,180 You can read more about "package data files" on setuptools documentation page: 2026-05-13T17:05:51,181 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-05-13T17:05:51,183 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-05-13T17:05:51,183 even if it does not contain any `.py` files. 2026-05-13T17:05:51,184 On the other hand, currently there is no concept of package data 2026-05-13T17:05:51,185 directory, all directories are treated like packages. 2026-05-13T17:05:51,185 ******************************************************************************** 2026-05-13T17:05:51,187 !! 2026-05-13T17:05:51,187 check.warn(importable) 2026-05-13T17:05:51,187 /tmp/pip-build-env-01om6rr3/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'skimgpt.visualization.example_data.peptic_ulcer' is absent from the `packages` configuration. 2026-05-13T17:05:51,188 !! 2026-05-13T17:05:51,189 ******************************************************************************** 2026-05-13T17:05:51,189 ############################ 2026-05-13T17:05:51,190 # Package would be ignored # 2026-05-13T17:05:51,190 ############################ 2026-05-13T17:05:51,190 Python recognizes 'skimgpt.visualization.example_data.peptic_ulcer' as an importable package[^1], 2026-05-13T17:05:51,191 but it is absent from setuptools' `packages` configuration. 2026-05-13T17:05:51,192 This leads to an ambiguous overall configuration. If you want to distribute this 2026-05-13T17:05:51,192 package, please make sure that 'skimgpt.visualization.example_data.peptic_ulcer' is explicitly added 2026-05-13T17:05:51,193 to the `packages` configuration field. 2026-05-13T17:05:51,194 Alternatively, you can also rely on setuptools' discovery methods 2026-05-13T17:05:51,194 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-05-13T17:05:51,195 instead of `find_packages(...)`/`find:`). 2026-05-13T17:05:51,196 You can read more about "package discovery" on setuptools documentation page: 2026-05-13T17:05:51,197 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-05-13T17:05:51,198 If you don't want 'skimgpt.visualization.example_data.peptic_ulcer' to be distributed and are 2026-05-13T17:05:51,198 already explicitly excluding 'skimgpt.visualization.example_data.peptic_ulcer' via 2026-05-13T17:05:51,199 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-05-13T17:05:51,200 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-05-13T17:05:51,200 combination with a more fine grained `package-data` configuration. 2026-05-13T17:05:51,202 You can read more about "package data files" on setuptools documentation page: 2026-05-13T17:05:51,203 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-05-13T17:05:51,205 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-05-13T17:05:51,206 even if it does not contain any `.py` files. 2026-05-13T17:05:51,207 On the other hand, currently there is no concept of package data 2026-05-13T17:05:51,207 directory, all directories are treated like packages. 2026-05-13T17:05:51,208 ******************************************************************************** 2026-05-13T17:05:51,209 !! 2026-05-13T17:05:51,209 check.warn(importable) 2026-05-13T17:05:51,210 /tmp/pip-build-env-01om6rr3/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'skimgpt.visualization.example_data.scrapie' is absent from the `packages` configuration. 2026-05-13T17:05:51,210 !! 2026-05-13T17:05:51,211 ******************************************************************************** 2026-05-13T17:05:51,212 ############################ 2026-05-13T17:05:51,213 # Package would be ignored # 2026-05-13T17:05:51,213 ############################ 2026-05-13T17:05:51,214 Python recognizes 'skimgpt.visualization.example_data.scrapie' as an importable package[^1], 2026-05-13T17:05:51,214 but it is absent from setuptools' `packages` configuration. 2026-05-13T17:05:51,215 This leads to an ambiguous overall configuration. If you want to distribute this 2026-05-13T17:05:51,216 package, please make sure that 'skimgpt.visualization.example_data.scrapie' is explicitly added 2026-05-13T17:05:51,217 to the `packages` configuration field. 2026-05-13T17:05:51,217 Alternatively, you can also rely on setuptools' discovery methods 2026-05-13T17:05:51,218 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-05-13T17:05:51,218 instead of `find_packages(...)`/`find:`). 2026-05-13T17:05:51,219 You can read more about "package discovery" on setuptools documentation page: 2026-05-13T17:05:51,220 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-05-13T17:05:51,220 If you don't want 'skimgpt.visualization.example_data.scrapie' to be distributed and are 2026-05-13T17:05:51,221 already explicitly excluding 'skimgpt.visualization.example_data.scrapie' via 2026-05-13T17:05:51,221 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-05-13T17:05:51,221 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-05-13T17:05:51,222 combination with a more fine grained `package-data` configuration. 2026-05-13T17:05:51,223 You can read more about "package data files" on setuptools documentation page: 2026-05-13T17:05:51,224 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-05-13T17:05:51,225 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-05-13T17:05:51,225 even if it does not contain any `.py` files. 2026-05-13T17:05:51,226 On the other hand, currently there is no concept of package data 2026-05-13T17:05:51,226 directory, all directories are treated like packages. 2026-05-13T17:05:51,227 ******************************************************************************** 2026-05-13T17:05:51,228 !! 2026-05-13T17:05:51,229 check.warn(importable) 2026-05-13T17:05:51,229 copying skimgpt/run.sh -> build/lib/skimgpt 2026-05-13T17:05:51,230 copying skimgpt/visualization/bayesian_ci_commandline.txt -> build/lib/skimgpt/visualization 2026-05-13T17:05:51,230 copying skimgpt/visualization/hyp_stats_commandline.txt -> build/lib/skimgpt/visualization 2026-05-13T17:05:51,231 copying skimgpt/visualization/plot_hyp_stats_commandline.txt -> build/lib/skimgpt/visualization 2026-05-13T17:05:51,232 copying skimgpt/visualization/plot_separate_runs_commandline.txt -> build/lib/skimgpt/visualization 2026-05-13T17:05:51,232 creating build/lib/skimgpt/visualization/example_data/CVD_HormonevsStatins 2026-05-13T17:05:51,233 copying skimgpt/visualization/example_data/CVD_HormonevsStatins/km_hyp_stats.txt -> build/lib/skimgpt/visualization/example_data/CVD_HormonevsStatins 2026-05-13T17:05:51,234 copying skimgpt/visualization/example_data/CVD_HormonevsStatins/km_kept.txt -> build/lib/skimgpt/visualization/example_data/CVD_HormonevsStatins 2026-05-13T17:05:51,234 creating build/lib/skimgpt/visualization/example_data/autism_GPvsVaccine 2026-05-13T17:05:51,235 copying skimgpt/visualization/example_data/autism_GPvsVaccine/km_hyp_stats.txt -> build/lib/skimgpt/visualization/example_data/autism_GPvsVaccine 2026-05-13T17:05:51,235 copying skimgpt/visualization/example_data/autism_GPvsVaccine/km_kept.txt -> build/lib/skimgpt/visualization/example_data/autism_GPvsVaccine 2026-05-13T17:05:51,236 creating build/lib/skimgpt/visualization/example_data/autism_microbiomeVsGP 2026-05-13T17:05:51,236 copying skimgpt/visualization/example_data/autism_microbiomeVsGP/km_hyp_stats.txt -> build/lib/skimgpt/visualization/example_data/autism_microbiomeVsGP 2026-05-13T17:05:51,237 copying skimgpt/visualization/example_data/autism_microbiomeVsGP/km_kept.txt -> build/lib/skimgpt/visualization/example_data/autism_microbiomeVsGP 2026-05-13T17:05:51,238 creating build/lib/skimgpt/visualization/example_data/autism_microbiomevsVax 2026-05-13T17:05:51,238 copying skimgpt/visualization/example_data/autism_microbiomevsVax/km_hyp_stats.txt -> build/lib/skimgpt/visualization/example_data/autism_microbiomevsVax 2026-05-13T17:05:51,239 copying skimgpt/visualization/example_data/autism_microbiomevsVax/km_kept.txt -> build/lib/skimgpt/visualization/example_data/autism_microbiomevsVax 2026-05-13T17:05:51,239 creating build/lib/skimgpt/visualization/example_data/cervical_cancer 2026-05-13T17:05:51,240 copying skimgpt/visualization/example_data/cervical_cancer/km_hyp_stats.txt -> build/lib/skimgpt/visualization/example_data/cervical_cancer 2026-05-13T17:05:51,240 copying skimgpt/visualization/example_data/cervical_cancer/km_kept.txt -> build/lib/skimgpt/visualization/example_data/cervical_cancer 2026-05-13T17:05:51,240 creating build/lib/skimgpt/visualization/example_data/peptic_ulcer 2026-05-13T17:05:51,241 copying skimgpt/visualization/example_data/peptic_ulcer/km_hyp_stats.txt -> build/lib/skimgpt/visualization/example_data/peptic_ulcer 2026-05-13T17:05:51,241 copying skimgpt/visualization/example_data/peptic_ulcer/km_kept.txt -> build/lib/skimgpt/visualization/example_data/peptic_ulcer 2026-05-13T17:05:51,242 creating build/lib/skimgpt/visualization/example_data/scrapie 2026-05-13T17:05:51,242 copying skimgpt/visualization/example_data/scrapie/km_hyp_stats.txt -> build/lib/skimgpt/visualization/example_data/scrapie 2026-05-13T17:05:51,243 copying skimgpt/visualization/example_data/scrapie/km_kept.txt -> build/lib/skimgpt/visualization/example_data/scrapie 2026-05-13T17:05:51,243 installing to build/bdist.linux-armv7l/wheel 2026-05-13T17:05:51,244 running install 2026-05-13T17:05:51,244 running install_lib 2026-05-13T17:05:51,245 creating build/bdist.linux-armv7l/wheel 2026-05-13T17:05:51,245 creating build/bdist.linux-armv7l/wheel/skimgpt 2026-05-13T17:05:51,246 copying build/lib/skimgpt/pubmed_fetcher.py -> build/bdist.linux-armv7l/wheel/./skimgpt 2026-05-13T17:05:51,246 creating build/bdist.linux-armv7l/wheel/skimgpt/visualization 2026-05-13T17:05:51,247 copying build/lib/skimgpt/visualization/plot_hyp_stats.py -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization 2026-05-13T17:05:51,249 copying build/lib/skimgpt/visualization/plot_hyp_stats_commandline.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization 2026-05-13T17:05:51,251 copying build/lib/skimgpt/visualization/hyp_stats.py -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization 2026-05-13T17:05:51,254 creating build/bdist.linux-armv7l/wheel/skimgpt/visualization/example_data 2026-05-13T17:05:51,256 creating build/bdist.linux-armv7l/wheel/skimgpt/visualization/example_data/CVD_HormonevsStatins 2026-05-13T17:05:51,257 copying build/lib/skimgpt/visualization/example_data/CVD_HormonevsStatins/km_kept.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization/example_data/CVD_HormonevsStatins 2026-05-13T17:05:51,260 copying build/lib/skimgpt/visualization/example_data/CVD_HormonevsStatins/km_hyp_stats.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization/example_data/CVD_HormonevsStatins 2026-05-13T17:05:51,262 creating build/bdist.linux-armv7l/wheel/skimgpt/visualization/example_data/cervical_cancer 2026-05-13T17:05:51,263 copying build/lib/skimgpt/visualization/example_data/cervical_cancer/km_kept.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization/example_data/cervical_cancer 2026-05-13T17:05:51,267 copying build/lib/skimgpt/visualization/example_data/cervical_cancer/km_hyp_stats.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization/example_data/cervical_cancer 2026-05-13T17:05:51,271 creating build/bdist.linux-armv7l/wheel/skimgpt/visualization/example_data/scrapie 2026-05-13T17:05:51,272 copying build/lib/skimgpt/visualization/example_data/scrapie/km_kept.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization/example_data/scrapie 2026-05-13T17:05:51,275 copying build/lib/skimgpt/visualization/example_data/scrapie/km_hyp_stats.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization/example_data/scrapie 2026-05-13T17:05:51,278 creating build/bdist.linux-armv7l/wheel/skimgpt/visualization/example_data/autism_GPvsVaccine 2026-05-13T17:05:51,279 copying build/lib/skimgpt/visualization/example_data/autism_GPvsVaccine/km_kept.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization/example_data/autism_GPvsVaccine 2026-05-13T17:05:51,282 copying build/lib/skimgpt/visualization/example_data/autism_GPvsVaccine/km_hyp_stats.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization/example_data/autism_GPvsVaccine 2026-05-13T17:05:51,285 creating build/bdist.linux-armv7l/wheel/skimgpt/visualization/example_data/peptic_ulcer 2026-05-13T17:05:51,286 copying build/lib/skimgpt/visualization/example_data/peptic_ulcer/km_kept.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization/example_data/peptic_ulcer 2026-05-13T17:05:51,290 copying build/lib/skimgpt/visualization/example_data/peptic_ulcer/km_hyp_stats.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization/example_data/peptic_ulcer 2026-05-13T17:05:51,293 creating build/bdist.linux-armv7l/wheel/skimgpt/visualization/example_data/autism_microbiomevsVax 2026-05-13T17:05:51,294 copying build/lib/skimgpt/visualization/example_data/autism_microbiomevsVax/km_kept.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization/example_data/autism_microbiomevsVax 2026-05-13T17:05:51,297 copying build/lib/skimgpt/visualization/example_data/autism_microbiomevsVax/km_hyp_stats.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization/example_data/autism_microbiomevsVax 2026-05-13T17:05:51,299 creating build/bdist.linux-armv7l/wheel/skimgpt/visualization/example_data/autism_microbiomeVsGP 2026-05-13T17:05:51,300 copying build/lib/skimgpt/visualization/example_data/autism_microbiomeVsGP/km_kept.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization/example_data/autism_microbiomeVsGP 2026-05-13T17:05:51,303 copying build/lib/skimgpt/visualization/example_data/autism_microbiomeVsGP/km_hyp_stats.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization/example_data/autism_microbiomeVsGP 2026-05-13T17:05:51,306 copying build/lib/skimgpt/visualization/plot_separate_runs.py -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization 2026-05-13T17:05:51,308 copying build/lib/skimgpt/visualization/plot_separate_runs_commandline.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization 2026-05-13T17:05:51,310 copying build/lib/skimgpt/visualization/__init__.py -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization 2026-05-13T17:05:51,312 copying build/lib/skimgpt/visualization/hyp_stats_commandline.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization 2026-05-13T17:05:51,313 copying build/lib/skimgpt/visualization/bayesian_ci.py -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization 2026-05-13T17:05:51,316 copying build/lib/skimgpt/visualization/bayesian_ci_commandline.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization 2026-05-13T17:05:51,318 copying build/lib/skimgpt/relevance_chtc.py -> build/bdist.linux-armv7l/wheel/./skimgpt 2026-05-13T17:05:51,320 copying build/lib/skimgpt/relevance_helper.py -> build/bdist.linux-armv7l/wheel/./skimgpt 2026-05-13T17:05:51,322 copying build/lib/skimgpt/main.py -> build/bdist.linux-armv7l/wheel/./skimgpt 2026-05-13T17:05:51,325 copying build/lib/skimgpt/eval_JSON_results.py -> build/bdist.linux-armv7l/wheel/./skimgpt 2026-05-13T17:05:51,327 copying build/lib/skimgpt/utils.py -> build/bdist.linux-armv7l/wheel/./skimgpt 2026-05-13T17:05:51,330 copying build/lib/skimgpt/scoring_guidelines.py -> build/bdist.linux-armv7l/wheel/./skimgpt 2026-05-13T17:05:51,332 copying build/lib/skimgpt/skim_and_km_api.py -> build/bdist.linux-armv7l/wheel/./skimgpt 2026-05-13T17:05:51,334 copying build/lib/skimgpt/relevance_triton.py -> build/bdist.linux-armv7l/wheel/./skimgpt 2026-05-13T17:05:51,337 copying build/lib/skimgpt/htcondor_helper.py -> build/bdist.linux-armv7l/wheel/./skimgpt 2026-05-13T17:05:51,339 copying build/lib/skimgpt/classifier.py -> build/bdist.linux-armv7l/wheel/./skimgpt 2026-05-13T17:05:51,342 copying build/lib/skimgpt/run.sh -> build/bdist.linux-armv7l/wheel/./skimgpt 2026-05-13T17:05:51,343 copying build/lib/skimgpt/cost_estimator.py -> build/bdist.linux-armv7l/wheel/./skimgpt 2026-05-13T17:05:51,346 copying build/lib/skimgpt/prompt_library.py -> build/bdist.linux-armv7l/wheel/./skimgpt 2026-05-13T17:05:51,348 copying build/lib/skimgpt/triton_client.py -> build/bdist.linux-armv7l/wheel/./skimgpt 2026-05-13T17:05:51,351 copying build/lib/skimgpt/retry.py -> build/bdist.linux-armv7l/wheel/./skimgpt 2026-05-13T17:05:51,352 copying build/lib/skimgpt/__init__.py -> build/bdist.linux-armv7l/wheel/./skimgpt 2026-05-13T17:05:51,354 running install_egg_info 2026-05-13T17:05:51,361 Copying skimgpt.egg-info to build/bdist.linux-armv7l/wheel/./skimgpt-2.0.2-py3.11.egg-info 2026-05-13T17:05:51,372 running install_scripts 2026-05-13T17:05:51,381 creating build/bdist.linux-armv7l/wheel/skimgpt-2.0.2.dist-info/WHEEL 2026-05-13T17:05:51,383 creating '/tmp/pip-wheel-9jluymgp/.tmp-mwyqig3t/skimgpt-2.0.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-05-13T17:05:51,386 adding 'skimgpt/__init__.py' 2026-05-13T17:05:51,389 adding 'skimgpt/classifier.py' 2026-05-13T17:05:51,391 adding 'skimgpt/cost_estimator.py' 2026-05-13T17:05:51,392 adding 'skimgpt/eval_JSON_results.py' 2026-05-13T17:05:51,394 adding 'skimgpt/htcondor_helper.py' 2026-05-13T17:05:51,396 adding 'skimgpt/main.py' 2026-05-13T17:05:51,400 adding 'skimgpt/prompt_library.py' 2026-05-13T17:05:51,402 adding 'skimgpt/pubmed_fetcher.py' 2026-05-13T17:05:51,404 adding 'skimgpt/relevance_chtc.py' 2026-05-13T17:05:51,407 adding 'skimgpt/relevance_helper.py' 2026-05-13T17:05:51,410 adding 'skimgpt/relevance_triton.py' 2026-05-13T17:05:51,411 adding 'skimgpt/retry.py' 2026-05-13T17:05:51,412 adding 'skimgpt/run.sh' 2026-05-13T17:05:51,414 adding 'skimgpt/scoring_guidelines.py' 2026-05-13T17:05:51,416 adding 'skimgpt/skim_and_km_api.py' 2026-05-13T17:05:51,418 adding 'skimgpt/triton_client.py' 2026-05-13T17:05:51,422 adding 'skimgpt/utils.py' 2026-05-13T17:05:51,424 adding 'skimgpt/visualization/__init__.py' 2026-05-13T17:05:51,426 adding 'skimgpt/visualization/bayesian_ci.py' 2026-05-13T17:05:51,427 adding 'skimgpt/visualization/bayesian_ci_commandline.txt' 2026-05-13T17:05:51,431 adding 'skimgpt/visualization/hyp_stats.py' 2026-05-13T17:05:51,433 adding 'skimgpt/visualization/hyp_stats_commandline.txt' 2026-05-13T17:05:51,435 adding 'skimgpt/visualization/plot_hyp_stats.py' 2026-05-13T17:05:51,436 adding 'skimgpt/visualization/plot_hyp_stats_commandline.txt' 2026-05-13T17:05:51,438 adding 'skimgpt/visualization/plot_separate_runs.py' 2026-05-13T17:05:51,439 adding 'skimgpt/visualization/plot_separate_runs_commandline.txt' 2026-05-13T17:05:51,442 adding 'skimgpt/visualization/example_data/CVD_HormonevsStatins/km_hyp_stats.txt' 2026-05-13T17:05:51,445 adding 'skimgpt/visualization/example_data/CVD_HormonevsStatins/km_kept.txt' 2026-05-13T17:05:51,448 adding 'skimgpt/visualization/example_data/autism_GPvsVaccine/km_hyp_stats.txt' 2026-05-13T17:05:51,452 adding 'skimgpt/visualization/example_data/autism_GPvsVaccine/km_kept.txt' 2026-05-13T17:05:51,454 adding 'skimgpt/visualization/example_data/autism_microbiomeVsGP/km_hyp_stats.txt' 2026-05-13T17:05:51,457 adding 'skimgpt/visualization/example_data/autism_microbiomeVsGP/km_kept.txt' 2026-05-13T17:05:51,460 adding 'skimgpt/visualization/example_data/autism_microbiomevsVax/km_hyp_stats.txt' 2026-05-13T17:05:51,463 adding 'skimgpt/visualization/example_data/autism_microbiomevsVax/km_kept.txt' 2026-05-13T17:05:51,468 adding 'skimgpt/visualization/example_data/cervical_cancer/km_hyp_stats.txt' 2026-05-13T17:05:51,475 adding 'skimgpt/visualization/example_data/cervical_cancer/km_kept.txt' 2026-05-13T17:05:51,478 adding 'skimgpt/visualization/example_data/peptic_ulcer/km_hyp_stats.txt' 2026-05-13T17:05:51,482 adding 'skimgpt/visualization/example_data/peptic_ulcer/km_kept.txt' 2026-05-13T17:05:51,486 adding 'skimgpt/visualization/example_data/scrapie/km_hyp_stats.txt' 2026-05-13T17:05:51,490 adding 'skimgpt/visualization/example_data/scrapie/km_kept.txt' 2026-05-13T17:05:51,492 adding 'skimgpt-2.0.2.dist-info/METADATA' 2026-05-13T17:05:51,493 adding 'skimgpt-2.0.2.dist-info/WHEEL' 2026-05-13T17:05:51,494 adding 'skimgpt-2.0.2.dist-info/entry_points.txt' 2026-05-13T17:05:51,495 adding 'skimgpt-2.0.2.dist-info/top_level.txt' 2026-05-13T17:05:51,496 adding 'skimgpt-2.0.2.dist-info/RECORD' 2026-05-13T17:05:51,500 removing build/bdist.linux-armv7l/wheel 2026-05-13T17:05:51,617 Building wheel for skimgpt (pyproject.toml): finished with status 'done' 2026-05-13T17:05:51,626 Created wheel for skimgpt: filename=skimgpt-2.0.2-py3-none-any.whl size=172209 sha256=7bd216923629bb130dcd874dd9f1defd17de020c45835f04ecf09fffb5707595 2026-05-13T17:05:51,628 Stored in directory: /tmp/pip-ephem-wheel-cache-x137zxj2/wheels/d7/93/2f/89fd5901f6a1ab03e74b80dadd0a55aa2f21868c96cec00f19 2026-05-13T17:05:51,640 Successfully built skimgpt 2026-05-13T17:05:51,650 Removed build tracker: '/tmp/pip-build-tracker-2_4n8dji'