2026-05-13T17:20:50,409 Created temporary directory: /tmp/pip-ephem-wheel-cache-lu8cmfi1
2026-05-13T17:20:50,411 Created temporary directory: /tmp/pip-build-tracker-vd5l3u0r
2026-05-13T17:20:50,412 Initialized build tracking at /tmp/pip-build-tracker-vd5l3u0r
2026-05-13T17:20:50,412 Created build tracker: /tmp/pip-build-tracker-vd5l3u0r
2026-05-13T17:20:50,413 Entered build tracker: /tmp/pip-build-tracker-vd5l3u0r
2026-05-13T17:20:50,413 Created temporary directory: /tmp/pip-wheel-pc6ykbxo
2026-05-13T17:20:50,417 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-05-13T17:20:50,419 Created temporary directory: /tmp/pip-ephem-wheel-cache-6lc5pvky
2026-05-13T17:20:50,441 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-05-13T17:20:50,444 2 location(s) to search for versions of ga4gh-va-spec:
2026-05-13T17:20:50,444 * https://pypi.org/simple/ga4gh-va-spec/
2026-05-13T17:20:50,444 * https://www.piwheels.org/simple/ga4gh-va-spec/
2026-05-13T17:20:50,445 Fetching project page and analyzing links: https://pypi.org/simple/ga4gh-va-spec/
2026-05-13T17:20:50,446 Getting page https://pypi.org/simple/ga4gh-va-spec/
2026-05-13T17:20:50,447 Found index url https://pypi.org/simple
2026-05-13T17:20:50,677 Fetched page https://pypi.org/simple/ga4gh-va-spec/ as application/vnd.pypi.simple.v1+json
2026-05-13T17:20:50,682   Skipping link: No binaries permitted for ga4gh-va-spec: https://files.pythonhosted.org/packages/19/98/0193ba36702117528036d926ba45cf6beb685559daa837d61ec405aecde5/ga4gh.va_spec-0.1.0-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10)
2026-05-13T17:20:50,683   Found link https://files.pythonhosted.org/packages/59/ce/80bef5bf8c614460c6522b70f44bf4c528ba470df639db9bac5abe2c2635/ga4gh_va_spec-0.1.0.tar.gz (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10), version: 0.1.0
2026-05-13T17:20:50,684   Skipping link: No binaries permitted for ga4gh-va-spec: https://files.pythonhosted.org/packages/6a/42/4d11ff68e3f45f711aea3dc2bcfdef91ef62e27ae2df3f3c16eaca9d467d/ga4gh.va_spec-0.1.1-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10)
2026-05-13T17:20:50,685   Found link https://files.pythonhosted.org/packages/8c/93/94b7b559972f512bc6e181102358753d9b9b113340fafc4af78bb4999a7a/ga4gh_va_spec-0.1.1.tar.gz (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10), version: 0.1.1
2026-05-13T17:20:50,686   Skipping link: No binaries permitted for ga4gh-va-spec: https://files.pythonhosted.org/packages/66/2e/d59a5a5367cb45f0fe81220079b7c152585430b97d68dbe4dd049cf80e93/ga4gh.va_spec-0.2.0a0-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10)
2026-05-13T17:20:50,687   Found link https://files.pythonhosted.org/packages/89/49/758a7a77a683ec127d4d7fffa5081bbc7b10ddc959af0f4622c81c74f617/ga4gh_va_spec-0.2.0a0.tar.gz (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10), version: 0.2.0a0
2026-05-13T17:20:50,688   Skipping link: No binaries permitted for ga4gh-va-spec: https://files.pythonhosted.org/packages/09/e5/e7686769b6ffa2cdc6d285a48088a929e9c1e73f031099f4dec7c8ab98a1/ga4gh_va_spec-0.2.0a1-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10)
2026-05-13T17:20:50,689   Found link https://files.pythonhosted.org/packages/9a/a8/50d697b7e07eb56e665af2caafdafb16590dcb6f5ff07d9dab2e8f6b3a05/ga4gh_va_spec-0.2.0a1.tar.gz (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10), version: 0.2.0a1
2026-05-13T17:20:50,690   Skipping link: No binaries permitted for ga4gh-va-spec: https://files.pythonhosted.org/packages/47/51/c1ba679b78b0385b7f7aa01c02af1c6e8af34b0038997b3a755dc873ce92/ga4gh_va_spec-0.2.0-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10)
2026-05-13T17:20:50,691   Found link https://files.pythonhosted.org/packages/41/44/e298f995f8db13a55aa67a4c93e5b8056df120436bf1324ebc611147dc9c/ga4gh_va_spec-0.2.0.tar.gz (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10), version: 0.2.0
2026-05-13T17:20:50,692   Skipping link: No binaries permitted for ga4gh-va-spec: https://files.pythonhosted.org/packages/af/17/e9bbe881bec04925324fe94d2785be75b03076f3ad913f6c87a0a06f885b/ga4gh_va_spec-0.3.0-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10)
2026-05-13T17:20:50,693   Found link https://files.pythonhosted.org/packages/6b/aa/921c10ce7c771772f8a6730666e75fea541c2eaadf6ada14e1716bb707ba/ga4gh_va_spec-0.3.0.tar.gz (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10), version: 0.3.0
2026-05-13T17:20:50,693   Skipping link: No binaries permitted for ga4gh-va-spec: https://files.pythonhosted.org/packages/ee/3d/091b7b151714e8d44b046f130fc40ab45bf6b8de1b394f7080914730a5eb/ga4gh_va_spec-0.4.0-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10)
2026-05-13T17:20:50,694   Found link https://files.pythonhosted.org/packages/11/c5/cd5fc43c4dd8fa866ef1583b6bd266adbcf5649360815b90486ab189ac02/ga4gh_va_spec-0.4.0.tar.gz (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10), version: 0.4.0
2026-05-13T17:20:50,694   Skipping link: No binaries permitted for ga4gh-va-spec: https://files.pythonhosted.org/packages/bd/32/ee457d5fd9f1500b40e9f1a6e9e2c7bb11adb9c6ffe13f4083e6687b456e/ga4gh_va_spec-0.4.1-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10)
2026-05-13T17:20:50,695   Found link https://files.pythonhosted.org/packages/66/a2/19f6e3f88341956dd5a4e486799a3222566b4c74145f32f7f18f04e84612/ga4gh_va_spec-0.4.1.tar.gz (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10), version: 0.4.1
2026-05-13T17:20:50,696   Skipping link: No binaries permitted for ga4gh-va-spec: https://files.pythonhosted.org/packages/8f/56/30ec07f32b9ea08f13fd03dc60dbcbaa45cdc26c9a62945cb08a0d8316f7/ga4gh_va_spec-0.4.2-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10)
2026-05-13T17:20:50,697   Found link https://files.pythonhosted.org/packages/fd/f1/aa7f0d9b9be6a25b4b97099d519f08602883bcaf6ded0a9c643d8629522e/ga4gh_va_spec-0.4.2.tar.gz (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10), version: 0.4.2
2026-05-13T17:20:50,698   Skipping link: No binaries permitted for ga4gh-va-spec: https://files.pythonhosted.org/packages/93/9f/5bcd71b216a7d88d4c90f9ef92072b62bc2a0b7a2bf38aa6c5e76df53168/ga4gh_va_spec-0.4.3-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10)
2026-05-13T17:20:50,699   Found link https://files.pythonhosted.org/packages/87/5f/63c6dcfff61b9676c3ca999ed547f09c6f6262975b2d931919f8a33d104d/ga4gh_va_spec-0.4.3.tar.gz (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10), version: 0.4.3
2026-05-13T17:20:50,700   Skipping link: No binaries permitted for ga4gh-va-spec: https://files.pythonhosted.org/packages/12/0f/66ff9541b355323e9b9b4f421aa370e87a58babf39a071aa666a4865d0b9/ga4gh_va_spec-0.5.0a0-py3-none-any.whl (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10)
2026-05-13T17:20:50,700   Found link https://files.pythonhosted.org/packages/57/e5/6f9938e3198c49b957dbdaf2d14d5b672026af563283489cfc1bd247caa4/ga4gh_va_spec-0.5.0a0.tar.gz (from https://pypi.org/simple/ga4gh-va-spec/) (requires-python:>=3.10), version: 0.5.0a0
2026-05-13T17:20:50,701 Fetching project page and analyzing links: https://www.piwheels.org/simple/ga4gh-va-spec/
2026-05-13T17:20:50,702 Getting page https://www.piwheels.org/simple/ga4gh-va-spec/
2026-05-13T17:20:50,703 Found index url https://www.piwheels.org/simple
2026-05-13T17:20:50,879 Fetched page https://www.piwheels.org/simple/ga4gh-va-spec/ as text/html
2026-05-13T17:20:50,883   Skipping link: No binaries permitted for ga4gh-va-spec: https://archive1.piwheels.org/simple/ga4gh-va-spec/ga4gh_va_spec-0.4.3-py3-none-any.whl#sha256=f87d7568e006ee4c7fd7fcd4969af3504b5dc5be1eccc6c8bd6ec5da208e5b53 (from https://www.piwheels.org/simple/ga4gh-va-spec/) (requires-python:>=3.10)
2026-05-13T17:20:50,884   Skipping link: No binaries permitted for ga4gh-va-spec: https://archive1.piwheels.org/simple/ga4gh-va-spec/ga4gh_va_spec-0.4.2-py3-none-any.whl#sha256=75041b8ee64e19d6a912daf8f1e77c015d4ee180c552bf091ffbff554bbd14f7 (from https://www.piwheels.org/simple/ga4gh-va-spec/) (requires-python:>=3.10)
2026-05-13T17:20:50,884   Skipping link: No binaries permitted for ga4gh-va-spec: https://archive1.piwheels.org/simple/ga4gh-va-spec/ga4gh_va_spec-0.4.1-py3-none-any.whl#sha256=6cc4cde9738b92f4bf360fb931d4cc1d15acdc0c146ba49b726150ee77c7c14b (from https://www.piwheels.org/simple/ga4gh-va-spec/) (requires-python:>=3.10)
2026-05-13T17:20:50,885   Skipping link: No binaries permitted for ga4gh-va-spec: https://archive1.piwheels.org/simple/ga4gh-va-spec/ga4gh_va_spec-0.4.0-py3-none-any.whl#sha256=2b510909c18e5b0fa66bd1e8c7219caf4041013a6fce44b501983e397353a43d (from https://www.piwheels.org/simple/ga4gh-va-spec/) (requires-python:>=3.10)
2026-05-13T17:20:50,885   Skipping link: No binaries permitted for ga4gh-va-spec: https://archive1.piwheels.org/simple/ga4gh-va-spec/ga4gh_va_spec-0.3.0-py3-none-any.whl#sha256=c5c4049c86a30fc0b3c642a5f068aa51eb67788c3261cdd24ebe9a7d9c4d4845 (from https://www.piwheels.org/simple/ga4gh-va-spec/) (requires-python:>=3.10)
2026-05-13T17:20:50,886   Skipping link: No binaries permitted for ga4gh-va-spec: https://archive1.piwheels.org/simple/ga4gh-va-spec/ga4gh_va_spec-0.2.0-py3-none-any.whl#sha256=56ca42b95d4e4abe9f2c82c471d09d7d57f81eb03cc9f074dcb40d92ae691c3c (from https://www.piwheels.org/simple/ga4gh-va-spec/) (requires-python:>=3.10)
2026-05-13T17:20:50,886   Skipping link: No binaries permitted for ga4gh-va-spec: https://archive1.piwheels.org/simple/ga4gh-va-spec/ga4gh_va_spec-0.2.0a1-py3-none-any.whl#sha256=433210b527d5e260b131efd5deea3441ab9c0295675d6aef60621f8729d53c01 (from https://www.piwheels.org/simple/ga4gh-va-spec/) (requires-python:>=3.10)
2026-05-13T17:20:50,887   Skipping link: No binaries permitted for ga4gh-va-spec: https://archive1.piwheels.org/simple/ga4gh-va-spec/ga4gh.va_spec-0.2.0a0-py3-none-any.whl#sha256=7b8f6e00b9a607843bec784da99ee486228f6cad96c7765b6a51299afb86d74b (from https://www.piwheels.org/simple/ga4gh-va-spec/) (requires-python:>=3.10)
2026-05-13T17:20:50,887   Skipping link: No binaries permitted for ga4gh-va-spec: https://archive1.piwheels.org/simple/ga4gh-va-spec/ga4gh.va_spec-0.1.1-py3-none-any.whl#sha256=6e274d2eced41895395ae3f0559c77094ad3eb07aed85f8efe833563b0f4dba9 (from https://www.piwheels.org/simple/ga4gh-va-spec/) (requires-python:>=3.10)
2026-05-13T17:20:50,888   Skipping link: No binaries permitted for ga4gh-va-spec: https://archive1.piwheels.org/simple/ga4gh-va-spec/ga4gh.va_spec-0.1.0-py3-none-any.whl#sha256=9e9e02d89981f64141688a9f5ce0b38aaa4dd9b1bf45cb485496a0c4521f2491 (from https://www.piwheels.org/simple/ga4gh-va-spec/) (requires-python:>=3.10)
2026-05-13T17:20:50,889 Skipping link: not a file: https://www.piwheels.org/simple/ga4gh-va-spec/
2026-05-13T17:20:50,889 Skipping link: not a file: https://pypi.org/simple/ga4gh-va-spec/
2026-05-13T17:20:50,909 Given no hashes to check 1 links for project 'ga4gh-va-spec': discarding no candidates
2026-05-13T17:20:50,926 Collecting ga4gh-va-spec==0.5.0a0
2026-05-13T17:20:50,929   Created temporary directory: /tmp/pip-unpack-k9h_nkbc
2026-05-13T17:20:51,081   Downloading ga4gh_va_spec-0.5.0a0.tar.gz (46 kB)
2026-05-13T17:20:51,223   Added ga4gh-va-spec==0.5.0a0 from https://files.pythonhosted.org/packages/57/e5/6f9938e3198c49b957dbdaf2d14d5b672026af563283489cfc1bd247caa4/ga4gh_va_spec-0.5.0a0.tar.gz to build tracker '/tmp/pip-build-tracker-vd5l3u0r'
2026-05-13T17:20:51,231   Created temporary directory: /tmp/pip-build-env-72vco3ql
2026-05-13T17:20:51,236   Installing build dependencies: started
2026-05-13T17:20:51,237   Running command pip subprocess to install build dependencies
2026-05-13T17:20:52,377   Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11)
2026-05-13T17:20:52,829   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-05-13T17:20:52,853   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-05-13T17:20:54,611   Collecting setuptools>=65.3
2026-05-13T17:20:54,612     Obtaining dependency information for setuptools>=65.3 from https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl.metadata
2026-05-13T17:20:54,626     Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl.metadata (6.5 kB)
2026-05-13T17:20:54,966   Collecting setuptools_scm>=8
2026-05-13T17:20:54,968     Obtaining dependency information for setuptools_scm>=8 from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl.metadata
2026-05-13T17:20:54,985     Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl.metadata (6.5 kB)
2026-05-13T17:20:54,996   Discarding https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl#sha256=600c37b3fea2bb517f59d76792adae856d0b5ce7735b186e4cde804375251321 (from https://www.piwheels.org/simple/setuptools-scm/) (requires-python:>=3.10): Requested setuptools_scm>=8 from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl#sha256=600c37b3fea2bb517f59d76792adae856d0b5ce7735b186e4cde804375251321 has inconsistent Name: expected 'setuptools_scm', but metadata has 'setuptools-scm'
2026-05-13T17:20:55,019     Using cached setuptools_scm-10.0.5-py3-none-any.whl (21 kB)
2026-05-13T17:20:55,102   Collecting vcs-versioning>=1.0.0.dev0
2026-05-13T17:20:55,103     Obtaining dependency information for vcs-versioning>=1.0.0.dev0 from https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl.metadata
2026-05-13T17:20:55,117     Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl.metadata (1.6 kB)
2026-05-13T17:20:55,308   Collecting packaging>=20
2026-05-13T17:20:55,309     Obtaining dependency information for packaging>=20 from https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata
2026-05-13T17:20:55,326     Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata (3.5 kB)
2026-05-13T17:20:55,529   Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB)
2026-05-13T17:20:55,549   Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl (79 kB)
2026-05-13T17:20:55,639   Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB)
2026-05-13T17:20:55,685   Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB)
2026-05-13T17:20:55,745   Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl (79 kB)
2026-05-13T17:20:55,834   Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB)
2026-05-13T17:20:58,594   Installing collected packages: setuptools, packaging, vcs-versioning, setuptools_scm
2026-05-13T17:21:02,579     Creating /tmp/pip-build-env-72vco3ql/overlay/local/bin
2026-05-13T17:21:02,581     changing mode of /tmp/pip-build-env-72vco3ql/overlay/local/bin/vcs-versioning to 755
2026-05-13T17:21:02,687     changing mode of /tmp/pip-build-env-72vco3ql/overlay/local/bin/setuptools-scm to 755
2026-05-13T17:21:02,714   Successfully installed packaging-26.2 setuptools-82.0.1 setuptools_scm-10.0.5 vcs-versioning-1.1.1
2026-05-13T17:21:03,007   Installing build dependencies: finished with status 'done'
2026-05-13T17:21:03,014   Getting requirements to build wheel: started
2026-05-13T17:21:03,015   Running command Getting requirements to build wheel
2026-05-13T17:21:03,743   /tmp/pip-build-env-72vco3ql/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2026-05-13T17:21:03,743   !!

2026-05-13T17:21:03,745           ********************************************************************************
2026-05-13T17:21:03,745           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2026-05-13T17:21:03,746           By 2027-Feb-18, you need to update your project and remove deprecated calls
2026-05-13T17:21:03,747           or your builds will no longer be supported.

2026-05-13T17:21:03,748           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-05-13T17:21:03,749           ********************************************************************************

2026-05-13T17:21:03,750   !!
2026-05-13T17:21:03,751     corresp(dist, value, root_dir)
2026-05-13T17:21:03,844   /tmp/pip-build-env-72vco3ql/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-05-13T17:21:03,845   !!

2026-05-13T17:21:03,846           ********************************************************************************
2026-05-13T17:21:03,846           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-05-13T17:21:03,848           License :: OSI Approved :: Apache Software License

2026-05-13T17:21:03,849           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-05-13T17:21:03,850           ********************************************************************************

2026-05-13T17:21:03,851   !!
2026-05-13T17:21:03,852     dist._finalize_license_expression()
2026-05-13T17:21:03,853   /tmp/pip-build-env-72vco3ql/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-05-13T17:21:03,854   !!

2026-05-13T17:21:03,855           ********************************************************************************
2026-05-13T17:21:03,856           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-05-13T17:21:03,857           License :: OSI Approved :: Apache Software License

2026-05-13T17:21:03,859           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-05-13T17:21:03,859           ********************************************************************************

2026-05-13T17:21:03,861   !!
2026-05-13T17:21:03,861     self._finalize_license_expression()
2026-05-13T17:21:03,862   running egg_info
2026-05-13T17:21:03,866   writing src/ga4gh.va_spec.egg-info/PKG-INFO
2026-05-13T17:21:03,872   writing dependency_links to src/ga4gh.va_spec.egg-info/dependency_links.txt
2026-05-13T17:21:03,875   writing requirements to src/ga4gh.va_spec.egg-info/requires.txt
2026-05-13T17:21:03,876   writing top-level names to src/ga4gh.va_spec.egg-info/top_level.txt
2026-05-13T17:21:03,916   /tmp/pip-build-env-72vco3ql/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly.
2026-05-13T17:21:03,917     return get_active_overrides().subprocess_timeout
2026-05-13T17:21:03,924   listing git files failed - pretending there aren't any
2026-05-13T17:21:03,929   reading manifest file 'src/ga4gh.va_spec.egg-info/SOURCES.txt'
2026-05-13T17:21:03,935   adding license file 'LICENSE'
2026-05-13T17:21:03,938   writing manifest file 'src/ga4gh.va_spec.egg-info/SOURCES.txt'
2026-05-13T17:21:04,043   Getting requirements to build wheel: finished with status 'done'
2026-05-13T17:21:04,046   Created temporary directory: /tmp/pip-modern-metadata-xp_1oc09
2026-05-13T17:21:04,048   Preparing metadata (pyproject.toml): started
2026-05-13T17:21:04,050   Running command Preparing metadata (pyproject.toml)
2026-05-13T17:21:04,708   /tmp/pip-build-env-72vco3ql/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2026-05-13T17:21:04,709   !!

2026-05-13T17:21:04,709           ********************************************************************************
2026-05-13T17:21:04,710           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2026-05-13T17:21:04,711           By 2027-Feb-18, you need to update your project and remove deprecated calls
2026-05-13T17:21:04,711           or your builds will no longer be supported.

2026-05-13T17:21:04,712           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-05-13T17:21:04,713           ********************************************************************************

2026-05-13T17:21:04,714   !!
2026-05-13T17:21:04,714     corresp(dist, value, root_dir)
2026-05-13T17:21:04,781   /tmp/pip-build-env-72vco3ql/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-05-13T17:21:04,781   !!

2026-05-13T17:21:04,782           ********************************************************************************
2026-05-13T17:21:04,783           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-05-13T17:21:04,784           License :: OSI Approved :: Apache Software License

2026-05-13T17:21:04,785           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-05-13T17:21:04,786           ********************************************************************************

2026-05-13T17:21:04,787   !!
2026-05-13T17:21:04,788     dist._finalize_license_expression()
2026-05-13T17:21:04,788   /tmp/pip-build-env-72vco3ql/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-05-13T17:21:04,789   !!

2026-05-13T17:21:04,790           ********************************************************************************
2026-05-13T17:21:04,791           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-05-13T17:21:04,792           License :: OSI Approved :: Apache Software License

2026-05-13T17:21:04,793           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-05-13T17:21:04,794           ********************************************************************************

2026-05-13T17:21:04,795   !!
2026-05-13T17:21:04,795     self._finalize_license_expression()
2026-05-13T17:21:04,796   running dist_info
2026-05-13T17:21:04,809   creating /tmp/pip-modern-metadata-xp_1oc09/ga4gh.va_spec.egg-info
2026-05-13T17:21:04,810   writing /tmp/pip-modern-metadata-xp_1oc09/ga4gh.va_spec.egg-info/PKG-INFO
2026-05-13T17:21:04,815   writing dependency_links to /tmp/pip-modern-metadata-xp_1oc09/ga4gh.va_spec.egg-info/dependency_links.txt
2026-05-13T17:21:04,818   writing requirements to /tmp/pip-modern-metadata-xp_1oc09/ga4gh.va_spec.egg-info/requires.txt
2026-05-13T17:21:04,819   writing top-level names to /tmp/pip-modern-metadata-xp_1oc09/ga4gh.va_spec.egg-info/top_level.txt
2026-05-13T17:21:04,821   writing manifest file '/tmp/pip-modern-metadata-xp_1oc09/ga4gh.va_spec.egg-info/SOURCES.txt'
2026-05-13T17:21:04,858   /tmp/pip-build-env-72vco3ql/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly.
2026-05-13T17:21:04,859     return get_active_overrides().subprocess_timeout
2026-05-13T17:21:04,865   listing git files failed - pretending there aren't any
2026-05-13T17:21:04,869   reading manifest file '/tmp/pip-modern-metadata-xp_1oc09/ga4gh.va_spec.egg-info/SOURCES.txt'
2026-05-13T17:21:04,871   adding license file 'LICENSE'
2026-05-13T17:21:04,874   writing manifest file '/tmp/pip-modern-metadata-xp_1oc09/ga4gh.va_spec.egg-info/SOURCES.txt'
2026-05-13T17:21:04,875   creating '/tmp/pip-modern-metadata-xp_1oc09/ga4gh_va_spec-0.5.0a0.dist-info'
2026-05-13T17:21:05,007   Preparing metadata (pyproject.toml): finished with status 'done'
2026-05-13T17:21:05,014   Source in /tmp/pip-wheel-pc6ykbxo/ga4gh-va-spec_d749eb23541f4ccdb64eaa94143e1af5 has version 0.5.0a0, which satisfies requirement ga4gh-va-spec==0.5.0a0 from https://files.pythonhosted.org/packages/57/e5/6f9938e3198c49b957dbdaf2d14d5b672026af563283489cfc1bd247caa4/ga4gh_va_spec-0.5.0a0.tar.gz
2026-05-13T17:21:05,015   Removed ga4gh-va-spec==0.5.0a0 from https://files.pythonhosted.org/packages/57/e5/6f9938e3198c49b957dbdaf2d14d5b672026af563283489cfc1bd247caa4/ga4gh_va_spec-0.5.0a0.tar.gz from build tracker '/tmp/pip-build-tracker-vd5l3u0r'
2026-05-13T17:21:05,025 Created temporary directory: /tmp/pip-unpack-huinrycc
2026-05-13T17:21:05,026 Building wheels for collected packages: ga4gh-va-spec
2026-05-13T17:21:05,030   Created temporary directory: /tmp/pip-wheel-x6d9gvce
2026-05-13T17:21:05,031   Destination directory: /tmp/pip-wheel-x6d9gvce
2026-05-13T17:21:05,033   Building wheel for ga4gh-va-spec (pyproject.toml): started
2026-05-13T17:21:05,034   Running command Building wheel for ga4gh-va-spec (pyproject.toml)
2026-05-13T17:21:05,673   /tmp/pip-build-env-72vco3ql/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2026-05-13T17:21:05,673   !!

2026-05-13T17:21:05,674           ********************************************************************************
2026-05-13T17:21:05,675           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2026-05-13T17:21:05,676           By 2027-Feb-18, you need to update your project and remove deprecated calls
2026-05-13T17:21:05,676           or your builds will no longer be supported.

2026-05-13T17:21:05,678           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-05-13T17:21:05,678           ********************************************************************************

2026-05-13T17:21:05,679   !!
2026-05-13T17:21:05,680     corresp(dist, value, root_dir)
2026-05-13T17:21:05,739   /tmp/pip-build-env-72vco3ql/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-05-13T17:21:05,740   !!

2026-05-13T17:21:05,741           ********************************************************************************
2026-05-13T17:21:05,741           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-05-13T17:21:05,742           License :: OSI Approved :: Apache Software License

2026-05-13T17:21:05,744           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-05-13T17:21:05,745           ********************************************************************************

2026-05-13T17:21:05,746   !!
2026-05-13T17:21:05,747     dist._finalize_license_expression()
2026-05-13T17:21:05,747   /tmp/pip-build-env-72vco3ql/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-05-13T17:21:05,748   !!

2026-05-13T17:21:05,749           ********************************************************************************
2026-05-13T17:21:05,750           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-05-13T17:21:05,751           License :: OSI Approved :: Apache Software License

2026-05-13T17:21:05,751           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-05-13T17:21:05,752           ********************************************************************************

2026-05-13T17:21:05,753   !!
2026-05-13T17:21:05,753     self._finalize_license_expression()
2026-05-13T17:21:05,754   running bdist_wheel
2026-05-13T17:21:05,772   running build
2026-05-13T17:21:05,772   running build_py
2026-05-13T17:21:05,775   creating build/lib/ga4gh/va_spec
2026-05-13T17:21:05,777   copying src/ga4gh/va_spec/__init__.py -> build/lib/ga4gh/va_spec
2026-05-13T17:21:05,779   creating build/lib/ga4gh/va_spec/ccv_2022
2026-05-13T17:21:05,780   copying src/ga4gh/va_spec/ccv_2022/models.py -> build/lib/ga4gh/va_spec/ccv_2022
2026-05-13T17:21:05,783   copying src/ga4gh/va_spec/ccv_2022/__init__.py -> build/lib/ga4gh/va_spec/ccv_2022
2026-05-13T17:21:05,785   copying src/ga4gh/va_spec/ccv_2022/derived_evidence.py -> build/lib/ga4gh/va_spec/ccv_2022
2026-05-13T17:21:05,787   creating build/lib/ga4gh/va_spec/base
2026-05-13T17:21:05,788   copying src/ga4gh/va_spec/base/core.py -> build/lib/ga4gh/va_spec/base
2026-05-13T17:21:05,791   copying src/ga4gh/va_spec/base/validators.py -> build/lib/ga4gh/va_spec/base
2026-05-13T17:21:05,793   copying src/ga4gh/va_spec/base/__init__.py -> build/lib/ga4gh/va_spec/base
2026-05-13T17:21:05,795   copying src/ga4gh/va_spec/base/enums.py -> build/lib/ga4gh/va_spec/base
2026-05-13T17:21:05,797   copying src/ga4gh/va_spec/base/domain_entities.py -> build/lib/ga4gh/va_spec/base
2026-05-13T17:21:05,799   creating build/lib/ga4gh/va_spec/aac_2017
2026-05-13T17:21:05,800   copying src/ga4gh/va_spec/aac_2017/models.py -> build/lib/ga4gh/va_spec/aac_2017
2026-05-13T17:21:05,803   copying src/ga4gh/va_spec/aac_2017/__init__.py -> build/lib/ga4gh/va_spec/aac_2017
2026-05-13T17:21:05,805   creating build/lib/ga4gh/va_spec/acmg_2015
2026-05-13T17:21:05,806   copying src/ga4gh/va_spec/acmg_2015/models.py -> build/lib/ga4gh/va_spec/acmg_2015
2026-05-13T17:21:05,809   copying src/ga4gh/va_spec/acmg_2015/__init__.py -> build/lib/ga4gh/va_spec/acmg_2015
2026-05-13T17:21:05,810   running egg_info
2026-05-13T17:21:05,823   writing src/ga4gh.va_spec.egg-info/PKG-INFO
2026-05-13T17:21:05,828   writing dependency_links to src/ga4gh.va_spec.egg-info/dependency_links.txt
2026-05-13T17:21:05,830   writing requirements to src/ga4gh.va_spec.egg-info/requires.txt
2026-05-13T17:21:05,831   writing top-level names to src/ga4gh.va_spec.egg-info/top_level.txt
2026-05-13T17:21:05,860   /tmp/pip-build-env-72vco3ql/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly.
2026-05-13T17:21:05,861     return get_active_overrides().subprocess_timeout
2026-05-13T17:21:05,867   listing git files failed - pretending there aren't any
2026-05-13T17:21:05,872   reading manifest file 'src/ga4gh.va_spec.egg-info/SOURCES.txt'
2026-05-13T17:21:05,875   adding license file 'LICENSE'
2026-05-13T17:21:05,879   writing manifest file 'src/ga4gh.va_spec.egg-info/SOURCES.txt'
2026-05-13T17:21:05,898   installing to build/bdist.linux-armv7l/wheel
2026-05-13T17:21:05,899   running install
2026-05-13T17:21:05,922   running install_lib
2026-05-13T17:21:05,929   creating build/bdist.linux-armv7l/wheel
2026-05-13T17:21:05,931   creating build/bdist.linux-armv7l/wheel/ga4gh
2026-05-13T17:21:05,933   creating build/bdist.linux-armv7l/wheel/ga4gh/va_spec
2026-05-13T17:21:05,935   creating build/bdist.linux-armv7l/wheel/ga4gh/va_spec/ccv_2022
2026-05-13T17:21:05,936   copying build/lib/ga4gh/va_spec/ccv_2022/models.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/ccv_2022
2026-05-13T17:21:05,938   copying build/lib/ga4gh/va_spec/ccv_2022/__init__.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/ccv_2022
2026-05-13T17:21:05,940   copying build/lib/ga4gh/va_spec/ccv_2022/derived_evidence.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/ccv_2022
2026-05-13T17:21:05,942   copying build/lib/ga4gh/va_spec/__init__.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec
2026-05-13T17:21:05,945   creating build/bdist.linux-armv7l/wheel/ga4gh/va_spec/base
2026-05-13T17:21:05,946   copying build/lib/ga4gh/va_spec/base/core.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/base
2026-05-13T17:21:05,949   copying build/lib/ga4gh/va_spec/base/validators.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/base
2026-05-13T17:21:05,950   copying build/lib/ga4gh/va_spec/base/__init__.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/base
2026-05-13T17:21:05,952   copying build/lib/ga4gh/va_spec/base/enums.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/base
2026-05-13T17:21:05,955   copying build/lib/ga4gh/va_spec/base/domain_entities.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/base
2026-05-13T17:21:05,957   creating build/bdist.linux-armv7l/wheel/ga4gh/va_spec/aac_2017
2026-05-13T17:21:05,958   copying build/lib/ga4gh/va_spec/aac_2017/models.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/aac_2017
2026-05-13T17:21:05,961   copying build/lib/ga4gh/va_spec/aac_2017/__init__.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/aac_2017
2026-05-13T17:21:05,963   creating build/bdist.linux-armv7l/wheel/ga4gh/va_spec/acmg_2015
2026-05-13T17:21:05,964   copying build/lib/ga4gh/va_spec/acmg_2015/models.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/acmg_2015
2026-05-13T17:21:05,967   copying build/lib/ga4gh/va_spec/acmg_2015/__init__.py -> build/bdist.linux-armv7l/wheel/./ga4gh/va_spec/acmg_2015
2026-05-13T17:21:05,968   running install_egg_info
2026-05-13T17:21:05,975   Copying src/ga4gh.va_spec.egg-info to build/bdist.linux-armv7l/wheel/./ga4gh.va_spec-0.5.0a0-py3.11.egg-info
2026-05-13T17:21:05,986   running install_scripts
2026-05-13T17:21:05,997   creating build/bdist.linux-armv7l/wheel/ga4gh_va_spec-0.5.0a0.dist-info/WHEEL
2026-05-13T17:21:06,000   creating '/tmp/pip-wheel-x6d9gvce/.tmp-5xi544o5/ga4gh_va_spec-0.5.0a0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2026-05-13T17:21:06,003   adding 'ga4gh/va_spec/__init__.py'
2026-05-13T17:21:06,005   adding 'ga4gh/va_spec/aac_2017/__init__.py'
2026-05-13T17:21:06,007   adding 'ga4gh/va_spec/aac_2017/models.py'
2026-05-13T17:21:06,009   adding 'ga4gh/va_spec/acmg_2015/__init__.py'
2026-05-13T17:21:06,011   adding 'ga4gh/va_spec/acmg_2015/models.py'
2026-05-13T17:21:06,013   adding 'ga4gh/va_spec/base/__init__.py'
2026-05-13T17:21:06,017   adding 'ga4gh/va_spec/base/core.py'
2026-05-13T17:21:06,018   adding 'ga4gh/va_spec/base/domain_entities.py'
2026-05-13T17:21:06,020   adding 'ga4gh/va_spec/base/enums.py'
2026-05-13T17:21:06,021   adding 'ga4gh/va_spec/base/validators.py'
2026-05-13T17:21:06,023   adding 'ga4gh/va_spec/ccv_2022/__init__.py'
2026-05-13T17:21:06,024   adding 'ga4gh/va_spec/ccv_2022/derived_evidence.py'
2026-05-13T17:21:06,026   adding 'ga4gh/va_spec/ccv_2022/models.py'
2026-05-13T17:21:06,029   adding 'ga4gh_va_spec-0.5.0a0.dist-info/licenses/LICENSE'
2026-05-13T17:21:06,032   adding 'ga4gh_va_spec-0.5.0a0.dist-info/METADATA'
2026-05-13T17:21:06,033   adding 'ga4gh_va_spec-0.5.0a0.dist-info/WHEEL'
2026-05-13T17:21:06,034   adding 'ga4gh_va_spec-0.5.0a0.dist-info/top_level.txt'
2026-05-13T17:21:06,035   adding 'ga4gh_va_spec-0.5.0a0.dist-info/RECORD'
2026-05-13T17:21:06,037   removing build/bdist.linux-armv7l/wheel
2026-05-13T17:21:06,150   Building wheel for ga4gh-va-spec (pyproject.toml): finished with status 'done'
2026-05-13T17:21:06,155   Created wheel for ga4gh-va-spec: filename=ga4gh_va_spec-0.5.0a0-py3-none-any.whl size=34452 sha256=09d4bf679d12cebc4f1f35574b47e0b0a2d4744aabe14aabddeea818f959e317
2026-05-13T17:21:06,157   Stored in directory: /tmp/pip-ephem-wheel-cache-6lc5pvky/wheels/3b/9e/4c/30b1ba2c5b120fb6349321af383b0ee0e1086cf49ac9bef67b
2026-05-13T17:21:06,175 Successfully built ga4gh-va-spec
2026-05-13T17:21:06,178 Removed build tracker: '/tmp/pip-build-tracker-vd5l3u0r'