2026-05-15T16:52:27,028 Created temporary directory: /tmp/pip-ephem-wheel-cache-jlk50n20 2026-05-15T16:52:27,030 Created temporary directory: /tmp/pip-build-tracker-4wqgu6yg 2026-05-15T16:52:27,030 Initialized build tracking at /tmp/pip-build-tracker-4wqgu6yg 2026-05-15T16:52:27,031 Created build tracker: /tmp/pip-build-tracker-4wqgu6yg 2026-05-15T16:52:27,031 Entered build tracker: /tmp/pip-build-tracker-4wqgu6yg 2026-05-15T16:52:27,032 Created temporary directory: /tmp/pip-wheel-c_br0ojp 2026-05-15T16:52:27,035 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-05-15T16:52:27,037 Created temporary directory: /tmp/pip-ephem-wheel-cache-szcq5_8o 2026-05-15T16:52:27,059 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-05-15T16:52:27,063 2 location(s) to search for versions of vivarium-config-tree: 2026-05-15T16:52:27,063 * https://pypi.org/simple/vivarium-config-tree/ 2026-05-15T16:52:27,063 * https://www.piwheels.org/simple/vivarium-config-tree/ 2026-05-15T16:52:27,064 Fetching project page and analyzing links: https://pypi.org/simple/vivarium-config-tree/ 2026-05-15T16:52:27,065 Getting page https://pypi.org/simple/vivarium-config-tree/ 2026-05-15T16:52:27,066 Found index url https://pypi.org/simple 2026-05-15T16:52:27,292 Fetched page https://pypi.org/simple/vivarium-config-tree/ as application/vnd.pypi.simple.v1+json 2026-05-15T16:52:27,293 Skipping link: No binaries permitted for vivarium-config-tree: https://files.pythonhosted.org/packages/e6/df/ce5d6333a2390dabe238d547f3d36e533416f2bee85f6adf715054cd6430/vivarium_config_tree-5.0.0-py3-none-any.whl (from https://pypi.org/simple/vivarium-config-tree/) (requires-python:>=3.10) 2026-05-15T16:52:27,294 Found link https://files.pythonhosted.org/packages/17/9d/918fb9873e0d5d10cf3e1db56292b569e7334fba245561ca9180a2f47a89/vivarium_config_tree-5.0.0.tar.gz (from https://pypi.org/simple/vivarium-config-tree/) (requires-python:>=3.10), version: 5.0.0 2026-05-15T16:52:27,295 Fetching project page and analyzing links: https://www.piwheels.org/simple/vivarium-config-tree/ 2026-05-15T16:52:27,296 Getting page https://www.piwheels.org/simple/vivarium-config-tree/ 2026-05-15T16:52:27,297 Found index url https://www.piwheels.org/simple 2026-05-15T16:52:27,473 Fetched page https://www.piwheels.org/simple/vivarium-config-tree/ as text/html 2026-05-15T16:52:27,474 Skipping link: not a file: https://www.piwheels.org/simple/vivarium-config-tree/ 2026-05-15T16:52:27,475 Skipping link: not a file: https://pypi.org/simple/vivarium-config-tree/ 2026-05-15T16:52:27,494 Given no hashes to check 1 links for project 'vivarium-config-tree': discarding no candidates 2026-05-15T16:52:27,511 Collecting vivarium-config-tree==5.0.0 2026-05-15T16:52:27,514 Created temporary directory: /tmp/pip-unpack-t54oc14c 2026-05-15T16:52:27,666 Downloading vivarium_config_tree-5.0.0.tar.gz (33 kB) 2026-05-15T16:52:27,773 Added vivarium-config-tree==5.0.0 from https://files.pythonhosted.org/packages/17/9d/918fb9873e0d5d10cf3e1db56292b569e7334fba245561ca9180a2f47a89/vivarium_config_tree-5.0.0.tar.gz to build tracker '/tmp/pip-build-tracker-4wqgu6yg' 2026-05-15T16:52:27,780 Created temporary directory: /tmp/pip-build-env-ry2qaywo 2026-05-15T16:52:27,784 Installing build dependencies: started 2026-05-15T16:52:27,786 Running command pip subprocess to install build dependencies 2026-05-15T16:52:28,919 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-05-15T16:52:29,352 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-05-15T16:52:29,375 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-05-15T16:52:31,141 Collecting setuptools>=61.0 2026-05-15T16:52:31,142 Obtaining dependency information for setuptools>=61.0 from https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl.metadata 2026-05-15T16:52:31,157 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl.metadata (6.5 kB) 2026-05-15T16:52:31,506 Collecting setuptools_scm[toml]>=8.0 2026-05-15T16:52:31,507 Obtaining dependency information for setuptools_scm[toml]>=8.0 from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl.metadata 2026-05-15T16:52:31,524 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl.metadata (6.5 kB) 2026-05-15T16:52:31,534 Discarding https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl#sha256=600c37b3fea2bb517f59d76792adae856d0b5ce7735b186e4cde804375251321 (from https://www.piwheels.org/simple/setuptools-scm/) (requires-python:>=3.10): Requested setuptools_scm>=8.0 from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl#sha256=600c37b3fea2bb517f59d76792adae856d0b5ce7735b186e4cde804375251321 has inconsistent Name: expected 'setuptools_scm', but metadata has 'setuptools-scm' 2026-05-15T16:52:31,557 Using cached setuptools_scm-10.0.5-py3-none-any.whl (21 kB) 2026-05-15T16:52:31,642 Collecting vcs-versioning>=1.0.0.dev0 2026-05-15T16:52:31,643 Obtaining dependency information for vcs-versioning>=1.0.0.dev0 from https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl.metadata 2026-05-15T16:52:31,658 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl.metadata (1.6 kB) 2026-05-15T16:52:31,839 Collecting packaging>=20 2026-05-15T16:52:31,840 Obtaining dependency information for packaging>=20 from https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata 2026-05-15T16:52:31,854 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata (3.5 kB) 2026-05-15T16:52:32,074 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB) 2026-05-15T16:52:32,095 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl (79 kB) 2026-05-15T16:52:32,188 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-05-15T16:52:32,222 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB) 2026-05-15T16:52:32,248 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl (79 kB) 2026-05-15T16:52:32,343 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-05-15T16:52:35,100 Installing collected packages: setuptools, packaging, vcs-versioning, setuptools_scm 2026-05-15T16:52:38,808 Creating /tmp/pip-build-env-ry2qaywo/overlay/local/bin 2026-05-15T16:52:38,811 changing mode of /tmp/pip-build-env-ry2qaywo/overlay/local/bin/vcs-versioning to 755 2026-05-15T16:52:38,938 changing mode of /tmp/pip-build-env-ry2qaywo/overlay/local/bin/setuptools-scm to 755 2026-05-15T16:52:38,967 Successfully installed packaging-26.2 setuptools-82.0.1 setuptools_scm-10.0.5 vcs-versioning-1.1.1 2026-05-15T16:52:39,259 Installing build dependencies: finished with status 'done' 2026-05-15T16:52:39,266 Getting requirements to build wheel: started 2026-05-15T16:52:39,268 Running command Getting requirements to build wheel 2026-05-15T16:52:40,018 /tmp/pip-build-env-ry2qaywo/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-05-15T16:52:40,018 !! 2026-05-15T16:52:40,019 ******************************************************************************** 2026-05-15T16:52:40,020 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-05-15T16:52:40,021 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-05-15T16:52:40,021 or your builds will no longer be supported. 2026-05-15T16:52:40,022 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-15T16:52:40,023 ******************************************************************************** 2026-05-15T16:52:40,023 !! 2026-05-15T16:52:40,024 corresp(dist, value, root_dir) 2026-05-15T16:52:40,103 running egg_info 2026-05-15T16:52:40,110 writing src/vivarium_config_tree.egg-info/PKG-INFO 2026-05-15T16:52:40,117 writing dependency_links to src/vivarium_config_tree.egg-info/dependency_links.txt 2026-05-15T16:52:40,120 writing requirements to src/vivarium_config_tree.egg-info/requires.txt 2026-05-15T16:52:40,122 writing top-level names to src/vivarium_config_tree.egg-info/top_level.txt 2026-05-15T16:52:40,157 /tmp/pip-build-env-ry2qaywo/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-05-15T16:52:40,157 return get_active_overrides().subprocess_timeout 2026-05-15T16:52:40,165 listing git files failed - pretending there aren't any 2026-05-15T16:52:40,170 reading manifest file 'src/vivarium_config_tree.egg-info/SOURCES.txt' 2026-05-15T16:52:40,177 adding license file 'LICENSE.txt' 2026-05-15T16:52:40,180 writing manifest file 'src/vivarium_config_tree.egg-info/SOURCES.txt' 2026-05-15T16:52:40,284 Getting requirements to build wheel: finished with status 'done' 2026-05-15T16:52:40,288 Created temporary directory: /tmp/pip-modern-metadata-p0zflfc0 2026-05-15T16:52:40,290 Preparing metadata (pyproject.toml): started 2026-05-15T16:52:40,292 Running command Preparing metadata (pyproject.toml) 2026-05-15T16:52:40,955 /tmp/pip-build-env-ry2qaywo/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-05-15T16:52:40,956 !! 2026-05-15T16:52:40,957 ******************************************************************************** 2026-05-15T16:52:40,957 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-05-15T16:52:40,959 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-05-15T16:52:40,959 or your builds will no longer be supported. 2026-05-15T16:52:40,960 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-15T16:52:40,961 ******************************************************************************** 2026-05-15T16:52:40,962 !! 2026-05-15T16:52:40,963 corresp(dist, value, root_dir) 2026-05-15T16:52:41,039 running dist_info 2026-05-15T16:52:41,053 creating /tmp/pip-modern-metadata-p0zflfc0/vivarium_config_tree.egg-info 2026-05-15T16:52:41,054 writing /tmp/pip-modern-metadata-p0zflfc0/vivarium_config_tree.egg-info/PKG-INFO 2026-05-15T16:52:41,061 writing dependency_links to /tmp/pip-modern-metadata-p0zflfc0/vivarium_config_tree.egg-info/dependency_links.txt 2026-05-15T16:52:41,064 writing requirements to /tmp/pip-modern-metadata-p0zflfc0/vivarium_config_tree.egg-info/requires.txt 2026-05-15T16:52:41,066 writing top-level names to /tmp/pip-modern-metadata-p0zflfc0/vivarium_config_tree.egg-info/top_level.txt 2026-05-15T16:52:41,067 writing manifest file '/tmp/pip-modern-metadata-p0zflfc0/vivarium_config_tree.egg-info/SOURCES.txt' 2026-05-15T16:52:41,099 /tmp/pip-build-env-ry2qaywo/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-05-15T16:52:41,100 return get_active_overrides().subprocess_timeout 2026-05-15T16:52:41,107 listing git files failed - pretending there aren't any 2026-05-15T16:52:41,111 reading manifest file '/tmp/pip-modern-metadata-p0zflfc0/vivarium_config_tree.egg-info/SOURCES.txt' 2026-05-15T16:52:41,113 adding license file 'LICENSE.txt' 2026-05-15T16:52:41,116 writing manifest file '/tmp/pip-modern-metadata-p0zflfc0/vivarium_config_tree.egg-info/SOURCES.txt' 2026-05-15T16:52:41,117 creating '/tmp/pip-modern-metadata-p0zflfc0/vivarium_config_tree-5.0.0.dist-info' 2026-05-15T16:52:41,247 Preparing metadata (pyproject.toml): finished with status 'done' 2026-05-15T16:52:41,252 Source in /tmp/pip-wheel-c_br0ojp/vivarium-config-tree_4e21f4e3621b403fbacffce69f28dec4 has version 5.0.0, which satisfies requirement vivarium-config-tree==5.0.0 from https://files.pythonhosted.org/packages/17/9d/918fb9873e0d5d10cf3e1db56292b569e7334fba245561ca9180a2f47a89/vivarium_config_tree-5.0.0.tar.gz 2026-05-15T16:52:41,253 Removed vivarium-config-tree==5.0.0 from https://files.pythonhosted.org/packages/17/9d/918fb9873e0d5d10cf3e1db56292b569e7334fba245561ca9180a2f47a89/vivarium_config_tree-5.0.0.tar.gz from build tracker '/tmp/pip-build-tracker-4wqgu6yg' 2026-05-15T16:52:41,258 Created temporary directory: /tmp/pip-unpack-jxf9lomz 2026-05-15T16:52:41,259 Building wheels for collected packages: vivarium-config-tree 2026-05-15T16:52:41,264 Created temporary directory: /tmp/pip-wheel-r274x085 2026-05-15T16:52:41,264 Destination directory: /tmp/pip-wheel-r274x085 2026-05-15T16:52:41,267 Building wheel for vivarium-config-tree (pyproject.toml): started 2026-05-15T16:52:41,268 Running command Building wheel for vivarium-config-tree (pyproject.toml) 2026-05-15T16:52:41,914 /tmp/pip-build-env-ry2qaywo/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-05-15T16:52:41,914 !! 2026-05-15T16:52:41,916 ******************************************************************************** 2026-05-15T16:52:41,916 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-05-15T16:52:41,917 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-05-15T16:52:41,918 or your builds will no longer be supported. 2026-05-15T16:52:41,919 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-15T16:52:41,920 ******************************************************************************** 2026-05-15T16:52:41,921 !! 2026-05-15T16:52:41,921 corresp(dist, value, root_dir) 2026-05-15T16:52:41,985 running bdist_wheel 2026-05-15T16:52:42,010 running build 2026-05-15T16:52:42,010 running build_py 2026-05-15T16:52:42,012 creating build/lib/vivarium/config_tree 2026-05-15T16:52:42,015 copying src/vivarium/config_tree/exceptions.py -> build/lib/vivarium/config_tree 2026-05-15T16:52:42,017 copying src/vivarium/config_tree/types.py -> build/lib/vivarium/config_tree 2026-05-15T16:52:42,019 copying src/vivarium/config_tree/utilities.py -> build/lib/vivarium/config_tree 2026-05-15T16:52:42,022 copying src/vivarium/config_tree/__init__.py -> build/lib/vivarium/config_tree 2026-05-15T16:52:42,024 copying src/vivarium/config_tree/main.py -> build/lib/vivarium/config_tree 2026-05-15T16:52:42,026 running egg_info 2026-05-15T16:52:42,039 writing src/vivarium_config_tree.egg-info/PKG-INFO 2026-05-15T16:52:42,045 writing dependency_links to src/vivarium_config_tree.egg-info/dependency_links.txt 2026-05-15T16:52:42,048 writing requirements to src/vivarium_config_tree.egg-info/requires.txt 2026-05-15T16:52:42,049 writing top-level names to src/vivarium_config_tree.egg-info/top_level.txt 2026-05-15T16:52:42,074 /tmp/pip-build-env-ry2qaywo/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-05-15T16:52:42,074 return get_active_overrides().subprocess_timeout 2026-05-15T16:52:42,081 listing git files failed - pretending there aren't any 2026-05-15T16:52:42,085 reading manifest file 'src/vivarium_config_tree.egg-info/SOURCES.txt' 2026-05-15T16:52:42,089 adding license file 'LICENSE.txt' 2026-05-15T16:52:42,093 writing manifest file 'src/vivarium_config_tree.egg-info/SOURCES.txt' 2026-05-15T16:52:42,096 copying src/vivarium/config_tree/py.typed -> build/lib/vivarium/config_tree 2026-05-15T16:52:42,111 installing to build/bdist.linux-armv7l/wheel 2026-05-15T16:52:42,111 running install 2026-05-15T16:52:42,135 running install_lib 2026-05-15T16:52:42,142 creating build/bdist.linux-armv7l/wheel 2026-05-15T16:52:42,144 creating build/bdist.linux-armv7l/wheel/vivarium 2026-05-15T16:52:42,145 creating build/bdist.linux-armv7l/wheel/vivarium/config_tree 2026-05-15T16:52:42,147 copying build/lib/vivarium/config_tree/py.typed -> build/bdist.linux-armv7l/wheel/./vivarium/config_tree 2026-05-15T16:52:42,149 copying build/lib/vivarium/config_tree/exceptions.py -> build/bdist.linux-armv7l/wheel/./vivarium/config_tree 2026-05-15T16:52:42,151 copying build/lib/vivarium/config_tree/types.py -> build/bdist.linux-armv7l/wheel/./vivarium/config_tree 2026-05-15T16:52:42,153 copying build/lib/vivarium/config_tree/utilities.py -> build/bdist.linux-armv7l/wheel/./vivarium/config_tree 2026-05-15T16:52:42,155 copying build/lib/vivarium/config_tree/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/config_tree 2026-05-15T16:52:42,157 copying build/lib/vivarium/config_tree/main.py -> build/bdist.linux-armv7l/wheel/./vivarium/config_tree 2026-05-15T16:52:42,159 running install_egg_info 2026-05-15T16:52:42,166 Copying src/vivarium_config_tree.egg-info to build/bdist.linux-armv7l/wheel/./vivarium_config_tree-5.0.0-py3.11.egg-info 2026-05-15T16:52:42,176 running install_scripts 2026-05-15T16:52:42,188 creating build/bdist.linux-armv7l/wheel/vivarium_config_tree-5.0.0.dist-info/WHEEL 2026-05-15T16:52:42,191 creating '/tmp/pip-wheel-r274x085/.tmp-yw7r4r4r/vivarium_config_tree-5.0.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-05-15T16:52:42,194 adding 'vivarium/config_tree/__init__.py' 2026-05-15T16:52:42,195 adding 'vivarium/config_tree/exceptions.py' 2026-05-15T16:52:42,199 adding 'vivarium/config_tree/main.py' 2026-05-15T16:52:42,200 adding 'vivarium/config_tree/py.typed' 2026-05-15T16:52:42,201 adding 'vivarium/config_tree/types.py' 2026-05-15T16:52:42,203 adding 'vivarium/config_tree/utilities.py' 2026-05-15T16:52:42,206 adding 'vivarium_config_tree-5.0.0.dist-info/licenses/LICENSE.txt' 2026-05-15T16:52:42,207 adding 'vivarium_config_tree-5.0.0.dist-info/METADATA' 2026-05-15T16:52:42,208 adding 'vivarium_config_tree-5.0.0.dist-info/WHEEL' 2026-05-15T16:52:42,209 adding 'vivarium_config_tree-5.0.0.dist-info/top_level.txt' 2026-05-15T16:52:42,210 adding 'vivarium_config_tree-5.0.0.dist-info/RECORD' 2026-05-15T16:52:42,212 removing build/bdist.linux-armv7l/wheel 2026-05-15T16:52:42,321 Building wheel for vivarium-config-tree (pyproject.toml): finished with status 'done' 2026-05-15T16:52:42,326 Created wheel for vivarium-config-tree: filename=vivarium_config_tree-5.0.0-py3-none-any.whl size=13280 sha256=ca930f4dd43a9f669cd3947a346d7c7087b2c892f10e6784314434d351ebce75 2026-05-15T16:52:42,327 Stored in directory: /tmp/pip-ephem-wheel-cache-szcq5_8o/wheels/46/48/9c/da41ed0d359a42a96b7391650ce9d320b2ba9fad81e83bab0c 2026-05-15T16:52:42,338 Successfully built vivarium-config-tree 2026-05-15T16:52:42,341 Removed build tracker: '/tmp/pip-build-tracker-4wqgu6yg'