2026-05-18T14:22:04,430 Created temporary directory: /tmp/pip-ephem-wheel-cache-_idmh2x4
2026-05-18T14:22:04,432 Created temporary directory: /tmp/pip-build-tracker-fe3guunc
2026-05-18T14:22:04,432 Initialized build tracking at /tmp/pip-build-tracker-fe3guunc
2026-05-18T14:22:04,433 Created build tracker: /tmp/pip-build-tracker-fe3guunc
2026-05-18T14:22:04,433 Entered build tracker: /tmp/pip-build-tracker-fe3guunc
2026-05-18T14:22:04,434 Created temporary directory: /tmp/pip-wheel-l0c3vmg3
2026-05-18T14:22:04,437 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-05-18T14:22:04,440 Created temporary directory: /tmp/pip-ephem-wheel-cache-_biv2y55
2026-05-18T14:22:04,461 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-05-18T14:22:04,465 2 location(s) to search for versions of oligo-designer-toolsuite:
2026-05-18T14:22:04,465 * https://pypi.org/simple/oligo-designer-toolsuite/
2026-05-18T14:22:04,465 * https://www.piwheels.org/simple/oligo-designer-toolsuite/
2026-05-18T14:22:04,466 Fetching project page and analyzing links: https://pypi.org/simple/oligo-designer-toolsuite/
2026-05-18T14:22:04,467 Getting page https://pypi.org/simple/oligo-designer-toolsuite/
2026-05-18T14:22:04,468 Found index url https://pypi.org/simple
2026-05-18T14:22:04,694 Fetched page https://pypi.org/simple/oligo-designer-toolsuite/ as application/vnd.pypi.simple.v1+json
2026-05-18T14:22:04,697   Found link https://files.pythonhosted.org/packages/30/7d/53b4439584867f5e7b4c03bd92d22b60b17be79937a104d75f61fb6004c0/oligo-designer-toolsuite-0.1.3.tar.gz (from https://pypi.org/simple/oligo-designer-toolsuite/), version: 0.1.3
2026-05-18T14:22:04,698   Skipping link: No binaries permitted for oligo-designer-toolsuite: https://files.pythonhosted.org/packages/68/bb/bfaea8d0d8944ac071d4b61e62a9bd5009e1617dc808cf0e331ca19a6891/oligo_designer_toolsuite-1.0.0-py3-none-any.whl (from https://pypi.org/simple/oligo-designer-toolsuite/) (requires-python:>=3.9)
2026-05-18T14:22:04,699   Found link https://files.pythonhosted.org/packages/21/ec/995468b7da13564197e9d898e9726c3a9a1971b5bae1c2b3344ad40e9d95/oligo_designer_toolsuite-1.0.0.tar.gz (from https://pypi.org/simple/oligo-designer-toolsuite/) (requires-python:>=3.9), version: 1.0.0
2026-05-18T14:22:04,700   Skipping link: No binaries permitted for oligo-designer-toolsuite: https://files.pythonhosted.org/packages/35/77/952e8e7ad29b5c9a85e44b8cf1cfc2183cf46f16ad34c1a6bd6ca3bd6f18/oligo_designer_toolsuite-1.0.1-py3-none-any.whl (from https://pypi.org/simple/oligo-designer-toolsuite/) (requires-python:>=3.9)
2026-05-18T14:22:04,701   Found link https://files.pythonhosted.org/packages/cb/32/b4baba23fa70caa0c3c8818112e2114a9e7c1b68f4419f61c43d4a08359f/oligo_designer_toolsuite-1.0.1.tar.gz (from https://pypi.org/simple/oligo-designer-toolsuite/) (requires-python:>=3.9), version: 1.0.1
2026-05-18T14:22:04,702   Skipping link: No binaries permitted for oligo-designer-toolsuite: https://files.pythonhosted.org/packages/23/56/52a14110e15f1e226d92fbe5699f828f53c727219099968f6e415cf4a2b9/oligo_designer_toolsuite-2.0.0-py3-none-any.whl (from https://pypi.org/simple/oligo-designer-toolsuite/) (requires-python:<3.13,>=3.10)
2026-05-18T14:22:04,703   Found link https://files.pythonhosted.org/packages/60/e6/73df1c7f0e086a9a157fcd60d123330b34d7c8a41078788ae8d746e471d9/oligo_designer_toolsuite-2.0.0.tar.gz (from https://pypi.org/simple/oligo-designer-toolsuite/) (requires-python:<3.13,>=3.10), version: 2.0.0
2026-05-18T14:22:04,703   Skipping link: No binaries permitted for oligo-designer-toolsuite: https://files.pythonhosted.org/packages/df/31/62f69036179c9dd13382076263283c7595178c4a1fba7722c0218ef179e5/oligo_designer_toolsuite-2.0.1-py3-none-any.whl (from https://pypi.org/simple/oligo-designer-toolsuite/) (requires-python:<3.13,>=3.10)
2026-05-18T14:22:04,705   Found link https://files.pythonhosted.org/packages/ab/dd/980713594ae4e8d9228919f67a65b059b7ea740d6b308d1bdd48850189a9/oligo_designer_toolsuite-2.0.1.tar.gz (from https://pypi.org/simple/oligo-designer-toolsuite/) (requires-python:<3.13,>=3.10), version: 2.0.1
2026-05-18T14:22:04,706 Fetching project page and analyzing links: https://www.piwheels.org/simple/oligo-designer-toolsuite/
2026-05-18T14:22:04,706 Getting page https://www.piwheels.org/simple/oligo-designer-toolsuite/
2026-05-18T14:22:04,707 Found index url https://www.piwheels.org/simple
2026-05-18T14:22:04,932 Fetched page https://www.piwheels.org/simple/oligo-designer-toolsuite/ as text/html
2026-05-18T14:22:04,934   Skipping link: No binaries permitted for oligo-designer-toolsuite: https://www.piwheels.org/simple/oligo-designer-toolsuite/oligo_designer_toolsuite-2.0.0-py3-none-any.whl#sha256=83f27ac3bd1e07a9bdec7f9e62eef370e66b7ea702f68010c17e5d26472a8149 (from https://www.piwheels.org/simple/oligo-designer-toolsuite/) (requires-python:<3.13,>=3.10)
2026-05-18T14:22:04,935   Skipping link: No binaries permitted for oligo-designer-toolsuite: https://archive1.piwheels.org/simple/oligo-designer-toolsuite/oligo_designer_toolsuite-1.0.1-py3-none-any.whl#sha256=2576bcd79b2531811505aa8bfc566ef6b44b1d5c83145323513baeaa6478cd8d (from https://www.piwheels.org/simple/oligo-designer-toolsuite/) (requires-python:>=3.9)
2026-05-18T14:22:04,935   Skipping link: No binaries permitted for oligo-designer-toolsuite: https://archive1.piwheels.org/simple/oligo-designer-toolsuite/oligo_designer_toolsuite-1.0.0-py3-none-any.whl#sha256=66e23b03f70cf6559593867257b7f09ee3e84a2153067c47722fe72f0a10e308 (from https://www.piwheels.org/simple/oligo-designer-toolsuite/) (requires-python:>=3.9)
2026-05-18T14:22:04,936   Skipping link: No binaries permitted for oligo-designer-toolsuite: https://archive1.piwheels.org/simple/oligo-designer-toolsuite/oligo_designer_toolsuite-0.1.3-py3-none-any.whl#sha256=4bf8a7588ba687eb0867396faf6877ef08e980ee4f9fd41fcb5e9c9f9098c939 (from https://www.piwheels.org/simple/oligo-designer-toolsuite/)
2026-05-18T14:22:04,937 Skipping link: not a file: https://www.piwheels.org/simple/oligo-designer-toolsuite/
2026-05-18T14:22:04,937 Skipping link: not a file: https://pypi.org/simple/oligo-designer-toolsuite/
2026-05-18T14:22:04,957 Given no hashes to check 1 links for project 'oligo-designer-toolsuite': discarding no candidates
2026-05-18T14:22:04,974 Collecting oligo-designer-toolsuite==2.0.1
2026-05-18T14:22:04,977   Created temporary directory: /tmp/pip-unpack-bwa5y5lk
2026-05-18T14:22:05,215   Downloading oligo_designer_toolsuite-2.0.1.tar.gz (71.3 MB)
2026-05-18T14:22:25,060   Added oligo-designer-toolsuite==2.0.1 from https://files.pythonhosted.org/packages/ab/dd/980713594ae4e8d9228919f67a65b059b7ea740d6b308d1bdd48850189a9/oligo_designer_toolsuite-2.0.1.tar.gz to build tracker '/tmp/pip-build-tracker-fe3guunc'
2026-05-18T14:22:25,068   Created temporary directory: /tmp/pip-build-env-bbvpk26w
2026-05-18T14:22:25,073   Installing build dependencies: started
2026-05-18T14:22:25,075   Running command pip subprocess to install build dependencies
2026-05-18T14:22:26,298   Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11)
2026-05-18T14:22:26,787   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-05-18T14:22:26,813   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-05-18T14:22:28,590   Collecting setuptools>=61.0
2026-05-18T14:22:28,591     Obtaining dependency information for setuptools>=61.0 from https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl.metadata
2026-05-18T14:22:29,397     Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl.metadata (6.5 kB)
2026-05-18T14:22:29,805   Collecting setuptools_scm[toml]>=6.2
2026-05-18T14:22:29,806     Obtaining dependency information for setuptools_scm[toml]>=6.2 from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl.metadata
2026-05-18T14:22:31,507     Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl.metadata (6.5 kB)
2026-05-18T14:22:31,527   Discarding https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl#sha256=600c37b3fea2bb517f59d76792adae856d0b5ce7735b186e4cde804375251321 (from https://www.piwheels.org/simple/setuptools-scm/) (requires-python:>=3.10): Requested setuptools_scm>=6.2 from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl#sha256=600c37b3fea2bb517f59d76792adae856d0b5ce7735b186e4cde804375251321 has inconsistent Name: expected 'setuptools_scm', but metadata has 'setuptools-scm'
2026-05-18T14:22:31,569     Using cached setuptools_scm-10.0.5-py3-none-any.whl (21 kB)
2026-05-18T14:22:31,686   Collecting vcs-versioning>=1.0.0.dev0
2026-05-18T14:22:31,687     Obtaining dependency information for vcs-versioning>=1.0.0.dev0 from https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl.metadata
2026-05-18T14:22:31,707     Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl.metadata (1.6 kB)
2026-05-18T14:22:33,398   Collecting packaging>=20
2026-05-18T14:22:33,399     Obtaining dependency information for packaging>=20 from https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata
2026-05-18T14:22:33,415     Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata (3.5 kB)
2026-05-18T14:22:33,642   Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB)
2026-05-18T14:22:34,970   Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl (79 kB)
2026-05-18T14:22:35,331   Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB)
2026-05-18T14:22:36,498   Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB)
2026-05-18T14:22:36,552   Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl (79 kB)
2026-05-18T14:22:37,762   Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB)
2026-05-18T14:22:40,529   Installing collected packages: setuptools, packaging, vcs-versioning, setuptools_scm
2026-05-18T14:22:44,217     Creating /tmp/pip-build-env-bbvpk26w/overlay/local/bin
2026-05-18T14:22:44,219     changing mode of /tmp/pip-build-env-bbvpk26w/overlay/local/bin/vcs-versioning to 755
2026-05-18T14:22:44,349     changing mode of /tmp/pip-build-env-bbvpk26w/overlay/local/bin/setuptools-scm to 755
2026-05-18T14:22:44,377   Successfully installed packaging-26.2 setuptools-82.0.1 setuptools_scm-10.0.5 vcs-versioning-1.1.1
2026-05-18T14:22:44,664   Installing build dependencies: finished with status 'done'
2026-05-18T14:22:44,671   Getting requirements to build wheel: started
2026-05-18T14:22:44,673   Running command Getting requirements to build wheel
2026-05-18T14:22:45,408   /tmp/pip-build-env-bbvpk26w/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2026-05-18T14:22:45,409   !!

2026-05-18T14:22:45,410           ********************************************************************************
2026-05-18T14:22:45,410           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2026-05-18T14:22:45,412           By 2027-Feb-18, you need to update your project and remove deprecated calls
2026-05-18T14:22:45,412           or your builds will no longer be supported.

2026-05-18T14:22:45,413           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-05-18T14:22:45,414           ********************************************************************************

2026-05-18T14:22:45,414   !!
2026-05-18T14:22:45,415     corresp(dist, value, root_dir)
2026-05-18T14:22:45,486   /tmp/pip-build-env-bbvpk26w/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-05-18T14:22:45,487   !!

2026-05-18T14:22:45,488           ********************************************************************************
2026-05-18T14:22:45,488           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-05-18T14:22:45,489           License :: OSI Approved :: MIT License

2026-05-18T14:22:45,490           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-05-18T14:22:45,491           ********************************************************************************

2026-05-18T14:22:45,492   !!
2026-05-18T14:22:45,492     dist._finalize_license_expression()
2026-05-18T14:22:45,495   /tmp/pip-build-env-bbvpk26w/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-05-18T14:22:45,496   !!

2026-05-18T14:22:45,497           ********************************************************************************
2026-05-18T14:22:45,497           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-05-18T14:22:45,498           License :: OSI Approved :: MIT License

2026-05-18T14:22:45,499           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-05-18T14:22:45,500           ********************************************************************************

2026-05-18T14:22:45,501   !!
2026-05-18T14:22:45,502     self._finalize_license_expression()
2026-05-18T14:22:45,504   running egg_info
2026-05-18T14:22:45,511   writing oligo_designer_toolsuite.egg-info/PKG-INFO
2026-05-18T14:22:45,517   writing dependency_links to oligo_designer_toolsuite.egg-info/dependency_links.txt
2026-05-18T14:22:45,519   writing entry points to oligo_designer_toolsuite.egg-info/entry_points.txt
2026-05-18T14:22:45,522   writing requirements to oligo_designer_toolsuite.egg-info/requires.txt
2026-05-18T14:22:45,523   writing top-level names to oligo_designer_toolsuite.egg-info/top_level.txt
2026-05-18T14:22:45,557   /tmp/pip-build-env-bbvpk26w/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly.
2026-05-18T14:22:45,558     return get_active_overrides().subprocess_timeout
2026-05-18T14:22:45,565   listing git files failed - pretending there aren't any
2026-05-18T14:22:45,570   reading manifest file 'oligo_designer_toolsuite.egg-info/SOURCES.txt'
2026-05-18T14:22:45,590   reading manifest template 'MANIFEST.in'
2026-05-18T14:22:45,596   no previously-included directories found matching 'tests'
2026-05-18T14:22:45,597   no previously-included directories found matching 'docs'
2026-05-18T14:22:45,597   no previously-included directories found matching 'tutorials'
2026-05-18T14:22:45,598   adding license file 'LICENSE'
2026-05-18T14:22:45,603   writing manifest file 'oligo_designer_toolsuite.egg-info/SOURCES.txt'
2026-05-18T14:22:45,707   Getting requirements to build wheel: finished with status 'done'
2026-05-18T14:22:45,711   Created temporary directory: /tmp/pip-modern-metadata-4g7p11pc
2026-05-18T14:22:45,713   Preparing metadata (pyproject.toml): started
2026-05-18T14:22:45,714   Running command Preparing metadata (pyproject.toml)
2026-05-18T14:22:46,381   /tmp/pip-build-env-bbvpk26w/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2026-05-18T14:22:46,381   !!

2026-05-18T14:22:46,382           ********************************************************************************
2026-05-18T14:22:46,382           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2026-05-18T14:22:46,383           By 2027-Feb-18, you need to update your project and remove deprecated calls
2026-05-18T14:22:46,384           or your builds will no longer be supported.

2026-05-18T14:22:46,385           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-05-18T14:22:46,385           ********************************************************************************

2026-05-18T14:22:46,386   !!
2026-05-18T14:22:46,387     corresp(dist, value, root_dir)
2026-05-18T14:22:46,458   /tmp/pip-build-env-bbvpk26w/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-05-18T14:22:46,458   !!

2026-05-18T14:22:46,459           ********************************************************************************
2026-05-18T14:22:46,460           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-05-18T14:22:46,461           License :: OSI Approved :: MIT License

2026-05-18T14:22:46,462           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-05-18T14:22:46,463           ********************************************************************************

2026-05-18T14:22:46,464   !!
2026-05-18T14:22:46,465     dist._finalize_license_expression()
2026-05-18T14:22:46,468   /tmp/pip-build-env-bbvpk26w/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-05-18T14:22:46,468   !!

2026-05-18T14:22:46,469           ********************************************************************************
2026-05-18T14:22:46,470           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-05-18T14:22:46,471           License :: OSI Approved :: MIT License

2026-05-18T14:22:46,473           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-05-18T14:22:46,473           ********************************************************************************

2026-05-18T14:22:46,475   !!
2026-05-18T14:22:46,475     self._finalize_license_expression()
2026-05-18T14:22:46,476   running dist_info
2026-05-18T14:22:46,490   creating /tmp/pip-modern-metadata-4g7p11pc/oligo_designer_toolsuite.egg-info
2026-05-18T14:22:46,491   writing /tmp/pip-modern-metadata-4g7p11pc/oligo_designer_toolsuite.egg-info/PKG-INFO
2026-05-18T14:22:46,497   writing dependency_links to /tmp/pip-modern-metadata-4g7p11pc/oligo_designer_toolsuite.egg-info/dependency_links.txt
2026-05-18T14:22:46,500   writing entry points to /tmp/pip-modern-metadata-4g7p11pc/oligo_designer_toolsuite.egg-info/entry_points.txt
2026-05-18T14:22:46,503   writing requirements to /tmp/pip-modern-metadata-4g7p11pc/oligo_designer_toolsuite.egg-info/requires.txt
2026-05-18T14:22:46,504   writing top-level names to /tmp/pip-modern-metadata-4g7p11pc/oligo_designer_toolsuite.egg-info/top_level.txt
2026-05-18T14:22:46,505   writing manifest file '/tmp/pip-modern-metadata-4g7p11pc/oligo_designer_toolsuite.egg-info/SOURCES.txt'
2026-05-18T14:22:46,536   /tmp/pip-build-env-bbvpk26w/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly.
2026-05-18T14:22:46,537     return get_active_overrides().subprocess_timeout
2026-05-18T14:22:46,544   listing git files failed - pretending there aren't any
2026-05-18T14:22:46,548   reading manifest file '/tmp/pip-modern-metadata-4g7p11pc/oligo_designer_toolsuite.egg-info/SOURCES.txt'
2026-05-18T14:22:46,550   reading manifest template 'MANIFEST.in'
2026-05-18T14:22:46,554   no previously-included directories found matching 'tests'
2026-05-18T14:22:46,555   no previously-included directories found matching 'docs'
2026-05-18T14:22:46,555   no previously-included directories found matching 'tutorials'
2026-05-18T14:22:46,556   adding license file 'LICENSE'
2026-05-18T14:22:46,560   writing manifest file '/tmp/pip-modern-metadata-4g7p11pc/oligo_designer_toolsuite.egg-info/SOURCES.txt'
2026-05-18T14:22:46,561   creating '/tmp/pip-modern-metadata-4g7p11pc/oligo_designer_toolsuite-2.0.1.dist-info'
2026-05-18T14:22:46,696   Preparing metadata (pyproject.toml): finished with status 'done'
2026-05-18T14:22:46,702   Source in /tmp/pip-wheel-l0c3vmg3/oligo-designer-toolsuite_25665f50ddf2403aab7181fbb65df9bc has version 2.0.1, which satisfies requirement oligo-designer-toolsuite==2.0.1 from https://files.pythonhosted.org/packages/ab/dd/980713594ae4e8d9228919f67a65b059b7ea740d6b308d1bdd48850189a9/oligo_designer_toolsuite-2.0.1.tar.gz
2026-05-18T14:22:46,703   Removed oligo-designer-toolsuite==2.0.1 from https://files.pythonhosted.org/packages/ab/dd/980713594ae4e8d9228919f67a65b059b7ea740d6b308d1bdd48850189a9/oligo_designer_toolsuite-2.0.1.tar.gz from build tracker '/tmp/pip-build-tracker-fe3guunc'
2026-05-18T14:22:46,710 Created temporary directory: /tmp/pip-unpack-9aafysxu
2026-05-18T14:22:46,711 Building wheels for collected packages: oligo-designer-toolsuite
2026-05-18T14:22:46,716   Created temporary directory: /tmp/pip-wheel-fv9cchse
2026-05-18T14:22:46,716   Destination directory: /tmp/pip-wheel-fv9cchse
2026-05-18T14:22:46,719   Building wheel for oligo-designer-toolsuite (pyproject.toml): started
2026-05-18T14:22:46,720   Running command Building wheel for oligo-designer-toolsuite (pyproject.toml)
2026-05-18T14:22:47,365   /tmp/pip-build-env-bbvpk26w/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2026-05-18T14:22:47,366   !!

2026-05-18T14:22:47,367           ********************************************************************************
2026-05-18T14:22:47,368           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2026-05-18T14:22:47,369           By 2027-Feb-18, you need to update your project and remove deprecated calls
2026-05-18T14:22:47,369           or your builds will no longer be supported.

2026-05-18T14:22:47,371           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-05-18T14:22:47,371           ********************************************************************************

2026-05-18T14:22:47,373   !!
2026-05-18T14:22:47,373     corresp(dist, value, root_dir)
2026-05-18T14:22:47,435   /tmp/pip-build-env-bbvpk26w/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-05-18T14:22:47,436   !!

2026-05-18T14:22:47,437           ********************************************************************************
2026-05-18T14:22:47,438           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-05-18T14:22:47,439           License :: OSI Approved :: MIT License

2026-05-18T14:22:47,440           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-05-18T14:22:47,441           ********************************************************************************

2026-05-18T14:22:47,443   !!
2026-05-18T14:22:47,443     dist._finalize_license_expression()
2026-05-18T14:22:47,444   /tmp/pip-build-env-bbvpk26w/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-05-18T14:22:47,445   !!

2026-05-18T14:22:47,446           ********************************************************************************
2026-05-18T14:22:47,446           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-05-18T14:22:47,447           License :: OSI Approved :: MIT License

2026-05-18T14:22:47,448           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-05-18T14:22:47,449           ********************************************************************************

2026-05-18T14:22:47,450   !!
2026-05-18T14:22:47,450     self._finalize_license_expression()
2026-05-18T14:22:47,451   running bdist_wheel
2026-05-18T14:22:47,471   running build
2026-05-18T14:22:47,471   running build_py
2026-05-18T14:22:47,473   creating build/lib/oligo_designer_toolsuite
2026-05-18T14:22:47,475   copying oligo_designer_toolsuite/_version.py -> build/lib/oligo_designer_toolsuite
2026-05-18T14:22:47,477   copying oligo_designer_toolsuite/__init__.py -> build/lib/oligo_designer_toolsuite
2026-05-18T14:22:47,479   copying oligo_designer_toolsuite/_constants.py -> build/lib/oligo_designer_toolsuite
2026-05-18T14:22:47,481   copying oligo_designer_toolsuite/_exceptions.py -> build/lib/oligo_designer_toolsuite
2026-05-18T14:22:47,483   running egg_info
2026-05-18T14:22:47,496   writing oligo_designer_toolsuite.egg-info/PKG-INFO
2026-05-18T14:22:47,501   writing dependency_links to oligo_designer_toolsuite.egg-info/dependency_links.txt
2026-05-18T14:22:47,503   writing entry points to oligo_designer_toolsuite.egg-info/entry_points.txt
2026-05-18T14:22:47,506   writing requirements to oligo_designer_toolsuite.egg-info/requires.txt
2026-05-18T14:22:47,507   writing top-level names to oligo_designer_toolsuite.egg-info/top_level.txt
2026-05-18T14:22:47,532   /tmp/pip-build-env-bbvpk26w/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly.
2026-05-18T14:22:47,532     return get_active_overrides().subprocess_timeout
2026-05-18T14:22:47,539   listing git files failed - pretending there aren't any
2026-05-18T14:22:47,543   reading manifest file 'oligo_designer_toolsuite.egg-info/SOURCES.txt'
2026-05-18T14:22:47,550   reading manifest template 'MANIFEST.in'
2026-05-18T14:22:47,554   no previously-included directories found matching 'tests'
2026-05-18T14:22:47,554   no previously-included directories found matching 'docs'
2026-05-18T14:22:47,555   no previously-included directories found matching 'tutorials'
2026-05-18T14:22:47,555   adding license file 'LICENSE'
2026-05-18T14:22:47,561   writing manifest file 'oligo_designer_toolsuite.egg-info/SOURCES.txt'
2026-05-18T14:22:47,564   /tmp/pip-build-env-bbvpk26w/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'oligo_designer_toolsuite.database' is absent from the `packages` configuration.
2026-05-18T14:22:47,565   !!

2026-05-18T14:22:47,566           ********************************************************************************
2026-05-18T14:22:47,567           ############################
2026-05-18T14:22:47,567           # Package would be ignored #
2026-05-18T14:22:47,568           ############################
2026-05-18T14:22:47,569           Python recognizes 'oligo_designer_toolsuite.database' as an importable package[^1],
2026-05-18T14:22:47,569           but it is absent from setuptools' `packages` configuration.

2026-05-18T14:22:47,570           This leads to an ambiguous overall configuration. If you want to distribute this
2026-05-18T14:22:47,571           package, please make sure that 'oligo_designer_toolsuite.database' is explicitly added
2026-05-18T14:22:47,572           to the `packages` configuration field.

2026-05-18T14:22:47,573           Alternatively, you can also rely on setuptools' discovery methods
2026-05-18T14:22:47,573           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2026-05-18T14:22:47,574           instead of `find_packages(...)`/`find:`).

2026-05-18T14:22:47,574           You can read more about "package discovery" on setuptools documentation page:

2026-05-18T14:22:47,575           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2026-05-18T14:22:47,576           If you don't want 'oligo_designer_toolsuite.database' to be distributed and are
2026-05-18T14:22:47,577           already explicitly excluding 'oligo_designer_toolsuite.database' via
2026-05-18T14:22:47,577           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2026-05-18T14:22:47,578           you can try to use `exclude_package_data`, or `include-package-data=False` in
2026-05-18T14:22:47,578           combination with a more fine grained `package-data` configuration.

2026-05-18T14:22:47,580           You can read more about "package data files" on setuptools documentation page:

2026-05-18T14:22:47,581           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2026-05-18T14:22:47,583           [^1]: For Python, any directory (with suitable naming) can be imported,
2026-05-18T14:22:47,583                 even if it does not contain any `.py` files.
2026-05-18T14:22:47,584                 On the other hand, currently there is no concept of package data
2026-05-18T14:22:47,584                 directory, all directories are treated like packages.
2026-05-18T14:22:47,585           ********************************************************************************

2026-05-18T14:22:47,586   !!
2026-05-18T14:22:47,586     check.warn(importable)
2026-05-18T14:22:47,587   /tmp/pip-build-env-bbvpk26w/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'oligo_designer_toolsuite.oligo_efficiency_filter' is absent from the `packages` configuration.
2026-05-18T14:22:47,587   !!

2026-05-18T14:22:47,589           ********************************************************************************
2026-05-18T14:22:47,589           ############################
2026-05-18T14:22:47,590           # Package would be ignored #
2026-05-18T14:22:47,590           ############################
2026-05-18T14:22:47,591           Python recognizes 'oligo_designer_toolsuite.oligo_efficiency_filter' as an importable package[^1],
2026-05-18T14:22:47,591           but it is absent from setuptools' `packages` configuration.

2026-05-18T14:22:47,592           This leads to an ambiguous overall configuration. If you want to distribute this
2026-05-18T14:22:47,593           package, please make sure that 'oligo_designer_toolsuite.oligo_efficiency_filter' is explicitly added
2026-05-18T14:22:47,593           to the `packages` configuration field.

2026-05-18T14:22:47,595           Alternatively, you can also rely on setuptools' discovery methods
2026-05-18T14:22:47,595           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2026-05-18T14:22:47,596           instead of `find_packages(...)`/`find:`).

2026-05-18T14:22:47,597           You can read more about "package discovery" on setuptools documentation page:

2026-05-18T14:22:47,598           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2026-05-18T14:22:47,599           If you don't want 'oligo_designer_toolsuite.oligo_efficiency_filter' to be distributed and are
2026-05-18T14:22:47,600           already explicitly excluding 'oligo_designer_toolsuite.oligo_efficiency_filter' via
2026-05-18T14:22:47,601           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2026-05-18T14:22:47,601           you can try to use `exclude_package_data`, or `include-package-data=False` in
2026-05-18T14:22:47,602           combination with a more fine grained `package-data` configuration.

2026-05-18T14:22:47,603           You can read more about "package data files" on setuptools documentation page:

2026-05-18T14:22:47,604           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2026-05-18T14:22:47,606           [^1]: For Python, any directory (with suitable naming) can be imported,
2026-05-18T14:22:47,606                 even if it does not contain any `.py` files.
2026-05-18T14:22:47,607                 On the other hand, currently there is no concept of package data
2026-05-18T14:22:47,607                 directory, all directories are treated like packages.
2026-05-18T14:22:47,608           ********************************************************************************

2026-05-18T14:22:47,609   !!
2026-05-18T14:22:47,609     check.warn(importable)
2026-05-18T14:22:47,610   /tmp/pip-build-env-bbvpk26w/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'oligo_designer_toolsuite.oligo_property_calculator' is absent from the `packages` configuration.
2026-05-18T14:22:47,610   !!

2026-05-18T14:22:47,611           ********************************************************************************
2026-05-18T14:22:47,612           ############################
2026-05-18T14:22:47,612           # Package would be ignored #
2026-05-18T14:22:47,613           ############################
2026-05-18T14:22:47,613           Python recognizes 'oligo_designer_toolsuite.oligo_property_calculator' as an importable package[^1],
2026-05-18T14:22:47,614           but it is absent from setuptools' `packages` configuration.

2026-05-18T14:22:47,615           This leads to an ambiguous overall configuration. If you want to distribute this
2026-05-18T14:22:47,615           package, please make sure that 'oligo_designer_toolsuite.oligo_property_calculator' is explicitly added
2026-05-18T14:22:47,616           to the `packages` configuration field.

2026-05-18T14:22:47,617           Alternatively, you can also rely on setuptools' discovery methods
2026-05-18T14:22:47,618           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2026-05-18T14:22:47,619           instead of `find_packages(...)`/`find:`).

2026-05-18T14:22:47,620           You can read more about "package discovery" on setuptools documentation page:

2026-05-18T14:22:47,621           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2026-05-18T14:22:47,622           If you don't want 'oligo_designer_toolsuite.oligo_property_calculator' to be distributed and are
2026-05-18T14:22:47,622           already explicitly excluding 'oligo_designer_toolsuite.oligo_property_calculator' via
2026-05-18T14:22:47,623           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2026-05-18T14:22:47,624           you can try to use `exclude_package_data`, or `include-package-data=False` in
2026-05-18T14:22:47,625           combination with a more fine grained `package-data` configuration.

2026-05-18T14:22:47,626           You can read more about "package data files" on setuptools documentation page:

2026-05-18T14:22:47,627           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2026-05-18T14:22:47,628           [^1]: For Python, any directory (with suitable naming) can be imported,
2026-05-18T14:22:47,629                 even if it does not contain any `.py` files.
2026-05-18T14:22:47,630                 On the other hand, currently there is no concept of package data
2026-05-18T14:22:47,630                 directory, all directories are treated like packages.
2026-05-18T14:22:47,631           ********************************************************************************

2026-05-18T14:22:47,632   !!
2026-05-18T14:22:47,632     check.warn(importable)
2026-05-18T14:22:47,633   /tmp/pip-build-env-bbvpk26w/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'oligo_designer_toolsuite.oligo_property_filter' is absent from the `packages` configuration.
2026-05-18T14:22:47,634   !!

2026-05-18T14:22:47,635           ********************************************************************************
2026-05-18T14:22:47,635           ############################
2026-05-18T14:22:47,636           # Package would be ignored #
2026-05-18T14:22:47,636           ############################
2026-05-18T14:22:47,637           Python recognizes 'oligo_designer_toolsuite.oligo_property_filter' as an importable package[^1],
2026-05-18T14:22:47,637           but it is absent from setuptools' `packages` configuration.

2026-05-18T14:22:47,638           This leads to an ambiguous overall configuration. If you want to distribute this
2026-05-18T14:22:47,639           package, please make sure that 'oligo_designer_toolsuite.oligo_property_filter' is explicitly added
2026-05-18T14:22:47,639           to the `packages` configuration field.

2026-05-18T14:22:47,640           Alternatively, you can also rely on setuptools' discovery methods
2026-05-18T14:22:47,641           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2026-05-18T14:22:47,641           instead of `find_packages(...)`/`find:`).

2026-05-18T14:22:47,642           You can read more about "package discovery" on setuptools documentation page:

2026-05-18T14:22:47,643           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2026-05-18T14:22:47,644           If you don't want 'oligo_designer_toolsuite.oligo_property_filter' to be distributed and are
2026-05-18T14:22:47,645           already explicitly excluding 'oligo_designer_toolsuite.oligo_property_filter' via
2026-05-18T14:22:47,645           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2026-05-18T14:22:47,646           you can try to use `exclude_package_data`, or `include-package-data=False` in
2026-05-18T14:22:47,646           combination with a more fine grained `package-data` configuration.

2026-05-18T14:22:47,647           You can read more about "package data files" on setuptools documentation page:

2026-05-18T14:22:47,648           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2026-05-18T14:22:47,650           [^1]: For Python, any directory (with suitable naming) can be imported,
2026-05-18T14:22:47,651                 even if it does not contain any `.py` files.
2026-05-18T14:22:47,651                 On the other hand, currently there is no concept of package data
2026-05-18T14:22:47,652                 directory, all directories are treated like packages.
2026-05-18T14:22:47,652           ********************************************************************************

2026-05-18T14:22:47,653   !!
2026-05-18T14:22:47,654     check.warn(importable)
2026-05-18T14:22:47,654   /tmp/pip-build-env-bbvpk26w/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'oligo_designer_toolsuite.oligo_selection' is absent from the `packages` configuration.
2026-05-18T14:22:47,655   !!

2026-05-18T14:22:47,656           ********************************************************************************
2026-05-18T14:22:47,657           ############################
2026-05-18T14:22:47,657           # Package would be ignored #
2026-05-18T14:22:47,658           ############################
2026-05-18T14:22:47,658           Python recognizes 'oligo_designer_toolsuite.oligo_selection' as an importable package[^1],
2026-05-18T14:22:47,659           but it is absent from setuptools' `packages` configuration.

2026-05-18T14:22:47,660           This leads to an ambiguous overall configuration. If you want to distribute this
2026-05-18T14:22:47,660           package, please make sure that 'oligo_designer_toolsuite.oligo_selection' is explicitly added
2026-05-18T14:22:47,661           to the `packages` configuration field.

2026-05-18T14:22:47,662           Alternatively, you can also rely on setuptools' discovery methods
2026-05-18T14:22:47,663           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2026-05-18T14:22:47,664           instead of `find_packages(...)`/`find:`).

2026-05-18T14:22:47,665           You can read more about "package discovery" on setuptools documentation page:

2026-05-18T14:22:47,666           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2026-05-18T14:22:47,667           If you don't want 'oligo_designer_toolsuite.oligo_selection' to be distributed and are
2026-05-18T14:22:47,668           already explicitly excluding 'oligo_designer_toolsuite.oligo_selection' via
2026-05-18T14:22:47,669           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2026-05-18T14:22:47,669           you can try to use `exclude_package_data`, or `include-package-data=False` in
2026-05-18T14:22:47,670           combination with a more fine grained `package-data` configuration.

2026-05-18T14:22:47,671           You can read more about "package data files" on setuptools documentation page:

2026-05-18T14:22:47,672           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2026-05-18T14:22:47,674           [^1]: For Python, any directory (with suitable naming) can be imported,
2026-05-18T14:22:47,675                 even if it does not contain any `.py` files.
2026-05-18T14:22:47,676                 On the other hand, currently there is no concept of package data
2026-05-18T14:22:47,677                 directory, all directories are treated like packages.
2026-05-18T14:22:47,678           ********************************************************************************

2026-05-18T14:22:47,680   !!
2026-05-18T14:22:47,681     check.warn(importable)
2026-05-18T14:22:47,681   /tmp/pip-build-env-bbvpk26w/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'oligo_designer_toolsuite.oligo_specificity_filter' is absent from the `packages` configuration.
2026-05-18T14:22:47,682   !!

2026-05-18T14:22:47,684           ********************************************************************************
2026-05-18T14:22:47,684           ############################
2026-05-18T14:22:47,685           # Package would be ignored #
2026-05-18T14:22:47,686           ############################
2026-05-18T14:22:47,686           Python recognizes 'oligo_designer_toolsuite.oligo_specificity_filter' as an importable package[^1],
2026-05-18T14:22:47,687           but it is absent from setuptools' `packages` configuration.

2026-05-18T14:22:47,689           This leads to an ambiguous overall configuration. If you want to distribute this
2026-05-18T14:22:47,689           package, please make sure that 'oligo_designer_toolsuite.oligo_specificity_filter' is explicitly added
2026-05-18T14:22:47,690           to the `packages` configuration field.

2026-05-18T14:22:47,692           Alternatively, you can also rely on setuptools' discovery methods
2026-05-18T14:22:47,692           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2026-05-18T14:22:47,693           instead of `find_packages(...)`/`find:`).

2026-05-18T14:22:47,695           You can read more about "package discovery" on setuptools documentation page:

2026-05-18T14:22:47,697           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2026-05-18T14:22:47,698           If you don't want 'oligo_designer_toolsuite.oligo_specificity_filter' to be distributed and are
2026-05-18T14:22:47,700           already explicitly excluding 'oligo_designer_toolsuite.oligo_specificity_filter' via
2026-05-18T14:22:47,701           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2026-05-18T14:22:47,701           you can try to use `exclude_package_data`, or `include-package-data=False` in
2026-05-18T14:22:47,702           combination with a more fine grained `package-data` configuration.

2026-05-18T14:22:47,704           You can read more about "package data files" on setuptools documentation page:

2026-05-18T14:22:47,706           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2026-05-18T14:22:47,707           [^1]: For Python, any directory (with suitable naming) can be imported,
2026-05-18T14:22:47,708                 even if it does not contain any `.py` files.
2026-05-18T14:22:47,708                 On the other hand, currently there is no concept of package data
2026-05-18T14:22:47,709                 directory, all directories are treated like packages.
2026-05-18T14:22:47,709           ********************************************************************************

2026-05-18T14:22:47,710   !!
2026-05-18T14:22:47,711     check.warn(importable)
2026-05-18T14:22:47,711   /tmp/pip-build-env-bbvpk26w/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'oligo_designer_toolsuite.pipelines' is absent from the `packages` configuration.
2026-05-18T14:22:47,711   !!

2026-05-18T14:22:47,713           ********************************************************************************
2026-05-18T14:22:47,713           ############################
2026-05-18T14:22:47,714           # Package would be ignored #
2026-05-18T14:22:47,715           ############################
2026-05-18T14:22:47,715           Python recognizes 'oligo_designer_toolsuite.pipelines' as an importable package[^1],
2026-05-18T14:22:47,716           but it is absent from setuptools' `packages` configuration.

2026-05-18T14:22:47,717           This leads to an ambiguous overall configuration. If you want to distribute this
2026-05-18T14:22:47,717           package, please make sure that 'oligo_designer_toolsuite.pipelines' is explicitly added
2026-05-18T14:22:47,718           to the `packages` configuration field.

2026-05-18T14:22:47,718           Alternatively, you can also rely on setuptools' discovery methods
2026-05-18T14:22:47,719           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2026-05-18T14:22:47,720           instead of `find_packages(...)`/`find:`).

2026-05-18T14:22:47,721           You can read more about "package discovery" on setuptools documentation page:

2026-05-18T14:22:47,722           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2026-05-18T14:22:47,723           If you don't want 'oligo_designer_toolsuite.pipelines' to be distributed and are
2026-05-18T14:22:47,723           already explicitly excluding 'oligo_designer_toolsuite.pipelines' via
2026-05-18T14:22:47,724           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2026-05-18T14:22:47,725           you can try to use `exclude_package_data`, or `include-package-data=False` in
2026-05-18T14:22:47,725           combination with a more fine grained `package-data` configuration.

2026-05-18T14:22:47,726           You can read more about "package data files" on setuptools documentation page:

2026-05-18T14:22:47,727           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2026-05-18T14:22:47,729           [^1]: For Python, any directory (with suitable naming) can be imported,
2026-05-18T14:22:47,729                 even if it does not contain any `.py` files.
2026-05-18T14:22:47,732                 On the other hand, currently there is no concept of package data
2026-05-18T14:22:47,732                 directory, all directories are treated like packages.
2026-05-18T14:22:47,733           ********************************************************************************

2026-05-18T14:22:47,734   !!
2026-05-18T14:22:47,734     check.warn(importable)
2026-05-18T14:22:47,735   /tmp/pip-build-env-bbvpk26w/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'oligo_designer_toolsuite.sequence_generator' is absent from the `packages` configuration.
2026-05-18T14:22:47,735   !!

2026-05-18T14:22:47,737           ********************************************************************************
2026-05-18T14:22:47,737           ############################
2026-05-18T14:22:47,738           # Package would be ignored #
2026-05-18T14:22:47,738           ############################
2026-05-18T14:22:47,739           Python recognizes 'oligo_designer_toolsuite.sequence_generator' as an importable package[^1],
2026-05-18T14:22:47,739           but it is absent from setuptools' `packages` configuration.

2026-05-18T14:22:47,740           This leads to an ambiguous overall configuration. If you want to distribute this
2026-05-18T14:22:47,741           package, please make sure that 'oligo_designer_toolsuite.sequence_generator' is explicitly added
2026-05-18T14:22:47,741           to the `packages` configuration field.

2026-05-18T14:22:47,742           Alternatively, you can also rely on setuptools' discovery methods
2026-05-18T14:22:47,742           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2026-05-18T14:22:47,743           instead of `find_packages(...)`/`find:`).

2026-05-18T14:22:47,744           You can read more about "package discovery" on setuptools documentation page:

2026-05-18T14:22:47,745           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2026-05-18T14:22:47,746           If you don't want 'oligo_designer_toolsuite.sequence_generator' to be distributed and are
2026-05-18T14:22:47,746           already explicitly excluding 'oligo_designer_toolsuite.sequence_generator' via
2026-05-18T14:22:47,747           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2026-05-18T14:22:47,747           you can try to use `exclude_package_data`, or `include-package-data=False` in
2026-05-18T14:22:47,748           combination with a more fine grained `package-data` configuration.

2026-05-18T14:22:47,749           You can read more about "package data files" on setuptools documentation page:

2026-05-18T14:22:47,750           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2026-05-18T14:22:47,751           [^1]: For Python, any directory (with suitable naming) can be imported,
2026-05-18T14:22:47,752                 even if it does not contain any `.py` files.
2026-05-18T14:22:47,752                 On the other hand, currently there is no concept of package data
2026-05-18T14:22:47,753                 directory, all directories are treated like packages.
2026-05-18T14:22:47,753           ********************************************************************************

2026-05-18T14:22:47,755   !!
2026-05-18T14:22:47,755     check.warn(importable)
2026-05-18T14:22:47,756   /tmp/pip-build-env-bbvpk26w/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'oligo_designer_toolsuite.utils' is absent from the `packages` configuration.
2026-05-18T14:22:47,756   !!

2026-05-18T14:22:47,757           ********************************************************************************
2026-05-18T14:22:47,758           ############################
2026-05-18T14:22:47,758           # Package would be ignored #
2026-05-18T14:22:47,759           ############################
2026-05-18T14:22:47,759           Python recognizes 'oligo_designer_toolsuite.utils' as an importable package[^1],
2026-05-18T14:22:47,760           but it is absent from setuptools' `packages` configuration.

2026-05-18T14:22:47,761           This leads to an ambiguous overall configuration. If you want to distribute this
2026-05-18T14:22:47,761           package, please make sure that 'oligo_designer_toolsuite.utils' is explicitly added
2026-05-18T14:22:47,762           to the `packages` configuration field.

2026-05-18T14:22:47,763           Alternatively, you can also rely on setuptools' discovery methods
2026-05-18T14:22:47,764           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2026-05-18T14:22:47,764           instead of `find_packages(...)`/`find:`).

2026-05-18T14:22:47,765           You can read more about "package discovery" on setuptools documentation page:

2026-05-18T14:22:47,766           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2026-05-18T14:22:47,768           If you don't want 'oligo_designer_toolsuite.utils' to be distributed and are
2026-05-18T14:22:47,768           already explicitly excluding 'oligo_designer_toolsuite.utils' via
2026-05-18T14:22:47,768           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2026-05-18T14:22:47,769           you can try to use `exclude_package_data`, or `include-package-data=False` in
2026-05-18T14:22:47,769           combination with a more fine grained `package-data` configuration.

2026-05-18T14:22:47,770           You can read more about "package data files" on setuptools documentation page:

2026-05-18T14:22:47,771           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2026-05-18T14:22:47,772           [^1]: For Python, any directory (with suitable naming) can be imported,
2026-05-18T14:22:47,773                 even if it does not contain any `.py` files.
2026-05-18T14:22:47,773                 On the other hand, currently there is no concept of package data
2026-05-18T14:22:47,774                 directory, all directories are treated like packages.
2026-05-18T14:22:47,774           ********************************************************************************

2026-05-18T14:22:47,775   !!
2026-05-18T14:22:47,775     check.warn(importable)
2026-05-18T14:22:47,776   creating build/lib/oligo_designer_toolsuite/database
2026-05-18T14:22:47,776   copying oligo_designer_toolsuite/database/__init__.py -> build/lib/oligo_designer_toolsuite/database
2026-05-18T14:22:47,777   copying oligo_designer_toolsuite/database/_oligo_database.py -> build/lib/oligo_designer_toolsuite/database
2026-05-18T14:22:47,777   copying oligo_designer_toolsuite/database/_reference_database.py -> build/lib/oligo_designer_toolsuite/database
2026-05-18T14:22:47,778   creating build/lib/oligo_designer_toolsuite/oligo_efficiency_filter
2026-05-18T14:22:47,778   copying oligo_designer_toolsuite/oligo_efficiency_filter/__init__.py -> build/lib/oligo_designer_toolsuite/oligo_efficiency_filter
2026-05-18T14:22:47,779   copying oligo_designer_toolsuite/oligo_efficiency_filter/_oligo_scoring.py -> build/lib/oligo_designer_toolsuite/oligo_efficiency_filter
2026-05-18T14:22:47,780   copying oligo_designer_toolsuite/oligo_efficiency_filter/_scorer_base.py -> build/lib/oligo_designer_toolsuite/oligo_efficiency_filter
2026-05-18T14:22:47,780   copying oligo_designer_toolsuite/oligo_efficiency_filter/_scorer_region_property.py -> build/lib/oligo_designer_toolsuite/oligo_efficiency_filter
2026-05-18T14:22:47,781   copying oligo_designer_toolsuite/oligo_efficiency_filter/_scorer_sequence_property.py -> build/lib/oligo_designer_toolsuite/oligo_efficiency_filter
2026-05-18T14:22:47,781   copying oligo_designer_toolsuite/oligo_efficiency_filter/_scorer_set_property.py -> build/lib/oligo_designer_toolsuite/oligo_efficiency_filter
2026-05-18T14:22:47,782   copying oligo_designer_toolsuite/oligo_efficiency_filter/_set_scoring.py -> build/lib/oligo_designer_toolsuite/oligo_efficiency_filter
2026-05-18T14:22:47,783   creating build/lib/oligo_designer_toolsuite/oligo_property_calculator
2026-05-18T14:22:47,783   copying oligo_designer_toolsuite/oligo_property_calculator/__init__.py -> build/lib/oligo_designer_toolsuite/oligo_property_calculator
2026-05-18T14:22:47,784   copying oligo_designer_toolsuite/oligo_property_calculator/_property_base.py -> build/lib/oligo_designer_toolsuite/oligo_property_calculator
2026-05-18T14:22:47,784   copying oligo_designer_toolsuite/oligo_property_calculator/_property_calculator.py -> build/lib/oligo_designer_toolsuite/oligo_property_calculator
2026-05-18T14:22:47,785   copying oligo_designer_toolsuite/oligo_property_calculator/_property_functions.py -> build/lib/oligo_designer_toolsuite/oligo_property_calculator
2026-05-18T14:22:47,785   copying oligo_designer_toolsuite/oligo_property_calculator/_property_region.py -> build/lib/oligo_designer_toolsuite/oligo_property_calculator
2026-05-18T14:22:47,786   copying oligo_designer_toolsuite/oligo_property_calculator/_property_sequence.py -> build/lib/oligo_designer_toolsuite/oligo_property_calculator
2026-05-18T14:22:47,787   creating build/lib/oligo_designer_toolsuite/oligo_property_filter
2026-05-18T14:22:47,788   copying oligo_designer_toolsuite/oligo_property_filter/__init__.py -> build/lib/oligo_designer_toolsuite/oligo_property_filter
2026-05-18T14:22:47,788   copying oligo_designer_toolsuite/oligo_property_filter/_filter_base.py -> build/lib/oligo_designer_toolsuite/oligo_property_filter
2026-05-18T14:22:47,789   copying oligo_designer_toolsuite/oligo_property_filter/_filter_experiment_specific.py -> build/lib/oligo_designer_toolsuite/oligo_property_filter
2026-05-18T14:22:47,789   copying oligo_designer_toolsuite/oligo_property_filter/_filter_experiment_unspecific.py -> build/lib/oligo_designer_toolsuite/oligo_property_filter
2026-05-18T14:22:47,790   copying oligo_designer_toolsuite/oligo_property_filter/_property_filter.py -> build/lib/oligo_designer_toolsuite/oligo_property_filter
2026-05-18T14:22:47,790   creating build/lib/oligo_designer_toolsuite/oligo_selection
2026-05-18T14:22:47,791   copying oligo_designer_toolsuite/oligo_selection/__init__.py -> build/lib/oligo_designer_toolsuite/oligo_selection
2026-05-18T14:22:47,792   copying oligo_designer_toolsuite/oligo_selection/_oligo_selection_base.py -> build/lib/oligo_designer_toolsuite/oligo_selection
2026-05-18T14:22:47,792   copying oligo_designer_toolsuite/oligo_selection/_oligo_selection_homogeneous_properties.py -> build/lib/oligo_designer_toolsuite/oligo_selection
2026-05-18T14:22:47,792   copying oligo_designer_toolsuite/oligo_selection/_oligo_selection_independent_sets.py -> build/lib/oligo_designer_toolsuite/oligo_selection
2026-05-18T14:22:47,793   creating build/lib/oligo_designer_toolsuite/oligo_specificity_filter
2026-05-18T14:22:47,793   copying oligo_designer_toolsuite/oligo_specificity_filter/__init__.py -> build/lib/oligo_designer_toolsuite/oligo_specificity_filter
2026-05-18T14:22:47,794   copying oligo_designer_toolsuite/oligo_specificity_filter/_filter_base.py -> build/lib/oligo_designer_toolsuite/oligo_specificity_filter
2026-05-18T14:22:47,795   copying oligo_designer_toolsuite/oligo_specificity_filter/_filter_blastn.py -> build/lib/oligo_designer_toolsuite/oligo_specificity_filter
2026-05-18T14:22:47,795   copying oligo_designer_toolsuite/oligo_specificity_filter/_filter_bowtie.py -> build/lib/oligo_designer_toolsuite/oligo_specificity_filter
2026-05-18T14:22:47,796   copying oligo_designer_toolsuite/oligo_specificity_filter/_filter_cross_hybridization.py -> build/lib/oligo_designer_toolsuite/oligo_specificity_filter
2026-05-18T14:22:47,796   copying oligo_designer_toolsuite/oligo_specificity_filter/_filter_exact_matches.py -> build/lib/oligo_designer_toolsuite/oligo_specificity_filter
2026-05-18T14:22:47,797   copying oligo_designer_toolsuite/oligo_specificity_filter/_filter_hybridization_probability.py -> build/lib/oligo_designer_toolsuite/oligo_specificity_filter
2026-05-18T14:22:47,798   copying oligo_designer_toolsuite/oligo_specificity_filter/_filter_variants.py -> build/lib/oligo_designer_toolsuite/oligo_specificity_filter
2026-05-18T14:22:47,798   copying oligo_designer_toolsuite/oligo_specificity_filter/_policies.py -> build/lib/oligo_designer_toolsuite/oligo_specificity_filter
2026-05-18T14:22:47,799   copying oligo_designer_toolsuite/oligo_specificity_filter/_specificity_filter.py -> build/lib/oligo_designer_toolsuite/oligo_specificity_filter
2026-05-18T14:22:47,799   creating build/lib/oligo_designer_toolsuite/pipelines
2026-05-18T14:22:47,800   copying oligo_designer_toolsuite/pipelines/__init__.py -> build/lib/oligo_designer_toolsuite/pipelines
2026-05-18T14:22:47,800   copying oligo_designer_toolsuite/pipelines/_cycle_hcr_probe_designer.py -> build/lib/oligo_designer_toolsuite/pipelines
2026-05-18T14:22:47,801   copying oligo_designer_toolsuite/pipelines/_genomic_region_generator.py -> build/lib/oligo_designer_toolsuite/pipelines
2026-05-18T14:22:47,801   copying oligo_designer_toolsuite/pipelines/_hcr_probe_designer.py -> build/lib/oligo_designer_toolsuite/pipelines
2026-05-18T14:22:47,802   copying oligo_designer_toolsuite/pipelines/_merfish_probe_designer.py -> build/lib/oligo_designer_toolsuite/pipelines
2026-05-18T14:22:47,803   copying oligo_designer_toolsuite/pipelines/_oligo_seq_probe_designer.py -> build/lib/oligo_designer_toolsuite/pipelines
2026-05-18T14:22:47,804   copying oligo_designer_toolsuite/pipelines/_scrinshot_probe_designer.py -> build/lib/oligo_designer_toolsuite/pipelines
2026-05-18T14:22:47,804   copying oligo_designer_toolsuite/pipelines/_seqfish_plus_probe_designer.py -> build/lib/oligo_designer_toolsuite/pipelines
2026-05-18T14:22:47,805   copying oligo_designer_toolsuite/pipelines/_utils.py -> build/lib/oligo_designer_toolsuite/pipelines
2026-05-18T14:22:47,805   creating build/lib/oligo_designer_toolsuite/sequence_generator
2026-05-18T14:22:47,805   copying oligo_designer_toolsuite/sequence_generator/__init__.py -> build/lib/oligo_designer_toolsuite/sequence_generator
2026-05-18T14:22:47,806   copying oligo_designer_toolsuite/sequence_generator/_ftp_loader.py -> build/lib/oligo_designer_toolsuite/sequence_generator
2026-05-18T14:22:47,806   copying oligo_designer_toolsuite/sequence_generator/_genomic_region_generator.py -> build/lib/oligo_designer_toolsuite/sequence_generator
2026-05-18T14:22:47,807   copying oligo_designer_toolsuite/sequence_generator/_oligo_sequence_generator.py -> build/lib/oligo_designer_toolsuite/sequence_generator
2026-05-18T14:22:47,807   creating build/lib/oligo_designer_toolsuite/utils
2026-05-18T14:22:47,808   copying oligo_designer_toolsuite/utils/__init__.py -> build/lib/oligo_designer_toolsuite/utils
2026-05-18T14:22:47,808   copying oligo_designer_toolsuite/utils/_checkers_and_helpers.py -> build/lib/oligo_designer_toolsuite/utils
2026-05-18T14:22:47,809   copying oligo_designer_toolsuite/utils/_database_processor.py -> build/lib/oligo_designer_toolsuite/utils
2026-05-18T14:22:47,809   copying oligo_designer_toolsuite/utils/_sequence_parser.py -> build/lib/oligo_designer_toolsuite/utils
2026-05-18T14:22:47,810   copying oligo_designer_toolsuite/utils/_sequence_processor.py -> build/lib/oligo_designer_toolsuite/utils
2026-05-18T14:22:47,810   installing to build/bdist.linux-armv7l/wheel
2026-05-18T14:22:47,811   running install
2026-05-18T14:22:47,817   running install_lib
2026-05-18T14:22:47,825   creating build/bdist.linux-armv7l/wheel
2026-05-18T14:22:47,827   creating build/bdist.linux-armv7l/wheel/oligo_designer_toolsuite
2026-05-18T14:22:47,829   creating build/bdist.linux-armv7l/wheel/oligo_designer_toolsuite/oligo_property_filter
2026-05-18T14:22:47,830   copying build/lib/oligo_designer_toolsuite/oligo_property_filter/_property_filter.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_property_filter
2026-05-18T14:22:47,833   copying build/lib/oligo_designer_toolsuite/oligo_property_filter/_filter_base.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_property_filter
2026-05-18T14:22:47,835   copying build/lib/oligo_designer_toolsuite/oligo_property_filter/_filter_experiment_specific.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_property_filter
2026-05-18T14:22:47,837   copying build/lib/oligo_designer_toolsuite/oligo_property_filter/__init__.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_property_filter
2026-05-18T14:22:47,839   copying build/lib/oligo_designer_toolsuite/oligo_property_filter/_filter_experiment_unspecific.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_property_filter
2026-05-18T14:22:47,842   creating build/bdist.linux-armv7l/wheel/oligo_designer_toolsuite/oligo_efficiency_filter
2026-05-18T14:22:47,843   copying build/lib/oligo_designer_toolsuite/oligo_efficiency_filter/_scorer_set_property.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_efficiency_filter
2026-05-18T14:22:47,845   copying build/lib/oligo_designer_toolsuite/oligo_efficiency_filter/_scorer_base.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_efficiency_filter
2026-05-18T14:22:47,847   copying build/lib/oligo_designer_toolsuite/oligo_efficiency_filter/_scorer_region_property.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_efficiency_filter
2026-05-18T14:22:47,850   copying build/lib/oligo_designer_toolsuite/oligo_efficiency_filter/_set_scoring.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_efficiency_filter
2026-05-18T14:22:47,852   copying build/lib/oligo_designer_toolsuite/oligo_efficiency_filter/_scorer_sequence_property.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_efficiency_filter
2026-05-18T14:22:47,855   copying build/lib/oligo_designer_toolsuite/oligo_efficiency_filter/__init__.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_efficiency_filter
2026-05-18T14:22:47,856   copying build/lib/oligo_designer_toolsuite/oligo_efficiency_filter/_oligo_scoring.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_efficiency_filter
2026-05-18T14:22:47,859   creating build/bdist.linux-armv7l/wheel/oligo_designer_toolsuite/utils
2026-05-18T14:22:47,860   copying build/lib/oligo_designer_toolsuite/utils/_checkers_and_helpers.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/utils
2026-05-18T14:22:47,862   copying build/lib/oligo_designer_toolsuite/utils/_database_processor.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/utils
2026-05-18T14:22:47,865   copying build/lib/oligo_designer_toolsuite/utils/_sequence_parser.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/utils
2026-05-18T14:22:47,867   copying build/lib/oligo_designer_toolsuite/utils/_sequence_processor.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/utils
2026-05-18T14:22:47,869   copying build/lib/oligo_designer_toolsuite/utils/__init__.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/utils
2026-05-18T14:22:47,872   creating build/bdist.linux-armv7l/wheel/oligo_designer_toolsuite/pipelines
2026-05-18T14:22:47,873   copying build/lib/oligo_designer_toolsuite/pipelines/_hcr_probe_designer.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/pipelines
2026-05-18T14:22:47,875   copying build/lib/oligo_designer_toolsuite/pipelines/_merfish_probe_designer.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/pipelines
2026-05-18T14:22:47,880   copying build/lib/oligo_designer_toolsuite/pipelines/_utils.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/pipelines
2026-05-18T14:22:47,882   copying build/lib/oligo_designer_toolsuite/pipelines/_oligo_seq_probe_designer.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/pipelines
2026-05-18T14:22:47,885   copying build/lib/oligo_designer_toolsuite/pipelines/_seqfish_plus_probe_designer.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/pipelines
2026-05-18T14:22:47,889   copying build/lib/oligo_designer_toolsuite/pipelines/_genomic_region_generator.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/pipelines
2026-05-18T14:22:47,892   copying build/lib/oligo_designer_toolsuite/pipelines/_scrinshot_probe_designer.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/pipelines
2026-05-18T14:22:47,895   copying build/lib/oligo_designer_toolsuite/pipelines/__init__.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/pipelines
2026-05-18T14:22:47,897   copying build/lib/oligo_designer_toolsuite/pipelines/_cycle_hcr_probe_designer.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/pipelines
2026-05-18T14:22:47,901   copying build/lib/oligo_designer_toolsuite/_version.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite
2026-05-18T14:22:47,903   creating build/bdist.linux-armv7l/wheel/oligo_designer_toolsuite/database
2026-05-18T14:22:47,904   copying build/lib/oligo_designer_toolsuite/database/_oligo_database.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/database
2026-05-18T14:22:47,907   copying build/lib/oligo_designer_toolsuite/database/_reference_database.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/database
2026-05-18T14:22:47,909   copying build/lib/oligo_designer_toolsuite/database/__init__.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/database
2026-05-18T14:22:47,912   creating build/bdist.linux-armv7l/wheel/oligo_designer_toolsuite/sequence_generator
2026-05-18T14:22:47,912   copying build/lib/oligo_designer_toolsuite/sequence_generator/_ftp_loader.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/sequence_generator
2026-05-18T14:22:47,915   copying build/lib/oligo_designer_toolsuite/sequence_generator/_genomic_region_generator.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/sequence_generator
2026-05-18T14:22:47,918   copying build/lib/oligo_designer_toolsuite/sequence_generator/_oligo_sequence_generator.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/sequence_generator
2026-05-18T14:22:47,921   copying build/lib/oligo_designer_toolsuite/sequence_generator/__init__.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/sequence_generator
2026-05-18T14:22:47,923   creating build/bdist.linux-armv7l/wheel/oligo_designer_toolsuite/oligo_selection
2026-05-18T14:22:47,924   copying build/lib/oligo_designer_toolsuite/oligo_selection/_oligo_selection_homogeneous_properties.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_selection
2026-05-18T14:22:47,926   copying build/lib/oligo_designer_toolsuite/oligo_selection/_oligo_selection_independent_sets.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_selection
2026-05-18T14:22:47,928   copying build/lib/oligo_designer_toolsuite/oligo_selection/__init__.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_selection
2026-05-18T14:22:47,930   copying build/lib/oligo_designer_toolsuite/oligo_selection/_oligo_selection_base.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_selection
2026-05-18T14:22:47,932   creating build/bdist.linux-armv7l/wheel/oligo_designer_toolsuite/oligo_property_calculator
2026-05-18T14:22:47,933   copying build/lib/oligo_designer_toolsuite/oligo_property_calculator/_property_base.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_property_calculator
2026-05-18T14:22:47,935   copying build/lib/oligo_designer_toolsuite/oligo_property_calculator/_property_sequence.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_property_calculator
2026-05-18T14:22:47,938   copying build/lib/oligo_designer_toolsuite/oligo_property_calculator/_property_calculator.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_property_calculator
2026-05-18T14:22:47,940   copying build/lib/oligo_designer_toolsuite/oligo_property_calculator/_property_region.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_property_calculator
2026-05-18T14:22:47,942   copying build/lib/oligo_designer_toolsuite/oligo_property_calculator/_property_functions.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_property_calculator
2026-05-18T14:22:47,945   copying build/lib/oligo_designer_toolsuite/oligo_property_calculator/__init__.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_property_calculator
2026-05-18T14:22:47,947   creating build/bdist.linux-armv7l/wheel/oligo_designer_toolsuite/oligo_specificity_filter
2026-05-18T14:22:47,948   copying build/lib/oligo_designer_toolsuite/oligo_specificity_filter/_specificity_filter.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_specificity_filter
2026-05-18T14:22:47,950   copying build/lib/oligo_designer_toolsuite/oligo_specificity_filter/_filter_cross_hybridization.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_specificity_filter
2026-05-18T14:22:47,952   copying build/lib/oligo_designer_toolsuite/oligo_specificity_filter/_filter_variants.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_specificity_filter
2026-05-18T14:22:47,955   copying build/lib/oligo_designer_toolsuite/oligo_specificity_filter/_policies.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_specificity_filter
2026-05-18T14:22:47,957   copying build/lib/oligo_designer_toolsuite/oligo_specificity_filter/_filter_base.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_specificity_filter
2026-05-18T14:22:47,960   copying build/lib/oligo_designer_toolsuite/oligo_specificity_filter/_filter_hybridization_probability.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_specificity_filter
2026-05-18T14:22:47,962   copying build/lib/oligo_designer_toolsuite/oligo_specificity_filter/_filter_bowtie.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_specificity_filter
2026-05-18T14:22:47,964   copying build/lib/oligo_designer_toolsuite/oligo_specificity_filter/_filter_blastn.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_specificity_filter
2026-05-18T14:22:47,967   copying build/lib/oligo_designer_toolsuite/oligo_specificity_filter/__init__.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_specificity_filter
2026-05-18T14:22:47,969   copying build/lib/oligo_designer_toolsuite/oligo_specificity_filter/_filter_exact_matches.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_specificity_filter
2026-05-18T14:22:47,971   copying build/lib/oligo_designer_toolsuite/__init__.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite
2026-05-18T14:22:47,973   copying build/lib/oligo_designer_toolsuite/_constants.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite
2026-05-18T14:22:47,974   copying build/lib/oligo_designer_toolsuite/_exceptions.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite
2026-05-18T14:22:47,976   running install_egg_info
2026-05-18T14:22:47,983   Copying oligo_designer_toolsuite.egg-info to build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite-2.0.1-py3.11.egg-info
2026-05-18T14:22:47,996   running install_scripts
2026-05-18T14:22:48,007   creating build/bdist.linux-armv7l/wheel/oligo_designer_toolsuite-2.0.1.dist-info/WHEEL
2026-05-18T14:22:48,010   creating '/tmp/pip-wheel-fv9cchse/.tmp-x646_s6t/oligo_designer_toolsuite-2.0.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2026-05-18T14:22:48,012   adding 'oligo_designer_toolsuite/__init__.py'
2026-05-18T14:22:48,013   adding 'oligo_designer_toolsuite/_constants.py'
2026-05-18T14:22:48,015   adding 'oligo_designer_toolsuite/_exceptions.py'
2026-05-18T14:22:48,016   adding 'oligo_designer_toolsuite/_version.py'
2026-05-18T14:22:48,018   adding 'oligo_designer_toolsuite/database/__init__.py'
2026-05-18T14:22:48,024   adding 'oligo_designer_toolsuite/database/_oligo_database.py'
2026-05-18T14:22:48,027   adding 'oligo_designer_toolsuite/database/_reference_database.py'
2026-05-18T14:22:48,029   adding 'oligo_designer_toolsuite/oligo_efficiency_filter/__init__.py'
2026-05-18T14:22:48,030   adding 'oligo_designer_toolsuite/oligo_efficiency_filter/_oligo_scoring.py'
2026-05-18T14:22:48,031   adding 'oligo_designer_toolsuite/oligo_efficiency_filter/_scorer_base.py'
2026-05-18T14:22:48,033   adding 'oligo_designer_toolsuite/oligo_efficiency_filter/_scorer_region_property.py'
2026-05-18T14:22:48,036   adding 'oligo_designer_toolsuite/oligo_efficiency_filter/_scorer_sequence_property.py'
2026-05-18T14:22:48,037   adding 'oligo_designer_toolsuite/oligo_efficiency_filter/_scorer_set_property.py'
2026-05-18T14:22:48,039   adding 'oligo_designer_toolsuite/oligo_efficiency_filter/_set_scoring.py'
2026-05-18T14:22:48,041   adding 'oligo_designer_toolsuite/oligo_property_calculator/__init__.py'
2026-05-18T14:22:48,042   adding 'oligo_designer_toolsuite/oligo_property_calculator/_property_base.py'
2026-05-18T14:22:48,043   adding 'oligo_designer_toolsuite/oligo_property_calculator/_property_calculator.py'
2026-05-18T14:22:48,046   adding 'oligo_designer_toolsuite/oligo_property_calculator/_property_functions.py'
2026-05-18T14:22:48,048   adding 'oligo_designer_toolsuite/oligo_property_calculator/_property_region.py'
2026-05-18T14:22:48,050   adding 'oligo_designer_toolsuite/oligo_property_calculator/_property_sequence.py'
2026-05-18T14:22:48,052   adding 'oligo_designer_toolsuite/oligo_property_filter/__init__.py'
2026-05-18T14:22:48,053   adding 'oligo_designer_toolsuite/oligo_property_filter/_filter_base.py'
2026-05-18T14:22:48,055   adding 'oligo_designer_toolsuite/oligo_property_filter/_filter_experiment_specific.py'
2026-05-18T14:22:48,057   adding 'oligo_designer_toolsuite/oligo_property_filter/_filter_experiment_unspecific.py'
2026-05-18T14:22:48,059   adding 'oligo_designer_toolsuite/oligo_property_filter/_property_filter.py'
2026-05-18T14:22:48,061   adding 'oligo_designer_toolsuite/oligo_selection/__init__.py'
2026-05-18T14:22:48,062   adding 'oligo_designer_toolsuite/oligo_selection/_oligo_selection_base.py'
2026-05-18T14:22:48,064   adding 'oligo_designer_toolsuite/oligo_selection/_oligo_selection_homogeneous_properties.py'
2026-05-18T14:22:48,066   adding 'oligo_designer_toolsuite/oligo_selection/_oligo_selection_independent_sets.py'
2026-05-18T14:22:48,068   adding 'oligo_designer_toolsuite/oligo_specificity_filter/__init__.py'
2026-05-18T14:22:48,071   adding 'oligo_designer_toolsuite/oligo_specificity_filter/_filter_base.py'
2026-05-18T14:22:48,075   adding 'oligo_designer_toolsuite/oligo_specificity_filter/_filter_blastn.py'
2026-05-18T14:22:48,078   adding 'oligo_designer_toolsuite/oligo_specificity_filter/_filter_bowtie.py'
2026-05-18T14:22:48,080   adding 'oligo_designer_toolsuite/oligo_specificity_filter/_filter_cross_hybridization.py'
2026-05-18T14:22:48,082   adding 'oligo_designer_toolsuite/oligo_specificity_filter/_filter_exact_matches.py'
2026-05-18T14:22:48,084   adding 'oligo_designer_toolsuite/oligo_specificity_filter/_filter_hybridization_probability.py'
2026-05-18T14:22:48,086   adding 'oligo_designer_toolsuite/oligo_specificity_filter/_filter_variants.py'
2026-05-18T14:22:48,088   adding 'oligo_designer_toolsuite/oligo_specificity_filter/_policies.py'
2026-05-18T14:22:48,089   adding 'oligo_designer_toolsuite/oligo_specificity_filter/_specificity_filter.py'
2026-05-18T14:22:48,091   adding 'oligo_designer_toolsuite/pipelines/__init__.py'
2026-05-18T14:22:48,102   adding 'oligo_designer_toolsuite/pipelines/_cycle_hcr_probe_designer.py'
2026-05-18T14:22:48,105   adding 'oligo_designer_toolsuite/pipelines/_genomic_region_generator.py'
2026-05-18T14:22:48,108   adding 'oligo_designer_toolsuite/pipelines/_hcr_probe_designer.py'
2026-05-18T14:22:48,122   adding 'oligo_designer_toolsuite/pipelines/_merfish_probe_designer.py'
2026-05-18T14:22:48,131   adding 'oligo_designer_toolsuite/pipelines/_oligo_seq_probe_designer.py'
2026-05-18T14:22:48,142   adding 'oligo_designer_toolsuite/pipelines/_scrinshot_probe_designer.py'
2026-05-18T14:22:48,156   adding 'oligo_designer_toolsuite/pipelines/_seqfish_plus_probe_designer.py'
2026-05-18T14:22:48,158   adding 'oligo_designer_toolsuite/pipelines/_utils.py'
2026-05-18T14:22:48,160   adding 'oligo_designer_toolsuite/sequence_generator/__init__.py'
2026-05-18T14:22:48,164   adding 'oligo_designer_toolsuite/sequence_generator/_ftp_loader.py'
2026-05-18T14:22:48,169   adding 'oligo_designer_toolsuite/sequence_generator/_genomic_region_generator.py'
2026-05-18T14:22:48,172   adding 'oligo_designer_toolsuite/sequence_generator/_oligo_sequence_generator.py'
2026-05-18T14:22:48,174   adding 'oligo_designer_toolsuite/utils/__init__.py'
2026-05-18T14:22:48,176   adding 'oligo_designer_toolsuite/utils/_checkers_and_helpers.py'
2026-05-18T14:22:48,178   adding 'oligo_designer_toolsuite/utils/_database_processor.py'
2026-05-18T14:22:48,181   adding 'oligo_designer_toolsuite/utils/_sequence_parser.py'
2026-05-18T14:22:48,183   adding 'oligo_designer_toolsuite/utils/_sequence_processor.py'
2026-05-18T14:22:48,186   adding 'oligo_designer_toolsuite-2.0.1.dist-info/licenses/LICENSE'
2026-05-18T14:22:48,188   adding 'oligo_designer_toolsuite-2.0.1.dist-info/METADATA'
2026-05-18T14:22:48,189   adding 'oligo_designer_toolsuite-2.0.1.dist-info/WHEEL'
2026-05-18T14:22:48,190   adding 'oligo_designer_toolsuite-2.0.1.dist-info/entry_points.txt'
2026-05-18T14:22:48,191   adding 'oligo_designer_toolsuite-2.0.1.dist-info/top_level.txt'
2026-05-18T14:22:48,193   adding 'oligo_designer_toolsuite-2.0.1.dist-info/RECORD'
2026-05-18T14:22:48,197   removing build/bdist.linux-armv7l/wheel
2026-05-18T14:22:48,317   Building wheel for oligo-designer-toolsuite (pyproject.toml): finished with status 'done'
2026-05-18T14:22:48,328   Created wheel for oligo-designer-toolsuite: filename=oligo_designer_toolsuite-2.0.1-py3-none-any.whl size=258260 sha256=a4d72de0783822a847c68b9dbf4223e163efe7c0f9707e1e8d60999d593fabb1
2026-05-18T14:22:48,329   Stored in directory: /tmp/pip-ephem-wheel-cache-_biv2y55/wheels/21/37/ea/8c189a78527cb5bf5c82eaa67b4554a24e242a48e9444ab715
2026-05-18T14:22:48,344 Successfully built oligo-designer-toolsuite
2026-05-18T14:22:48,354 Removed build tracker: '/tmp/pip-build-tracker-fe3guunc'