2026-05-19T17:09:18,260 Created temporary directory: /tmp/pip-ephem-wheel-cache-n4yj8e6m
2026-05-19T17:09:18,262 Created temporary directory: /tmp/pip-build-tracker-1cki1shz
2026-05-19T17:09:18,263 Initialized build tracking at /tmp/pip-build-tracker-1cki1shz
2026-05-19T17:09:18,263 Created build tracker: /tmp/pip-build-tracker-1cki1shz
2026-05-19T17:09:18,264 Entered build tracker: /tmp/pip-build-tracker-1cki1shz
2026-05-19T17:09:18,265 Created temporary directory: /tmp/pip-wheel-rj1w0os0
2026-05-19T17:09:18,267 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-05-19T17:09:18,270 Created temporary directory: /tmp/pip-ephem-wheel-cache-p25e40mh
2026-05-19T17:09:18,291 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-05-19T17:09:18,295 2 location(s) to search for versions of oligo-designer-toolsuite:
2026-05-19T17:09:18,295 * https://pypi.org/simple/oligo-designer-toolsuite/
2026-05-19T17:09:18,295 * https://www.piwheels.org/simple/oligo-designer-toolsuite/
2026-05-19T17:09:18,296 Fetching project page and analyzing links: https://pypi.org/simple/oligo-designer-toolsuite/
2026-05-19T17:09:18,296 Getting page https://pypi.org/simple/oligo-designer-toolsuite/
2026-05-19T17:09:18,298 Found index url https://pypi.org/simple
2026-05-19T17:09:18,526 Fetched page https://pypi.org/simple/oligo-designer-toolsuite/ as application/vnd.pypi.simple.v1+json
2026-05-19T17:09:18,529   Found link https://files.pythonhosted.org/packages/30/7d/53b4439584867f5e7b4c03bd92d22b60b17be79937a104d75f61fb6004c0/oligo-designer-toolsuite-0.1.3.tar.gz (from https://pypi.org/simple/oligo-designer-toolsuite/), version: 0.1.3
2026-05-19T17:09:18,530   Skipping link: No binaries permitted for oligo-designer-toolsuite: https://files.pythonhosted.org/packages/68/bb/bfaea8d0d8944ac071d4b61e62a9bd5009e1617dc808cf0e331ca19a6891/oligo_designer_toolsuite-1.0.0-py3-none-any.whl (from https://pypi.org/simple/oligo-designer-toolsuite/) (requires-python:>=3.9)
2026-05-19T17:09:18,531   Found link https://files.pythonhosted.org/packages/21/ec/995468b7da13564197e9d898e9726c3a9a1971b5bae1c2b3344ad40e9d95/oligo_designer_toolsuite-1.0.0.tar.gz (from https://pypi.org/simple/oligo-designer-toolsuite/) (requires-python:>=3.9), version: 1.0.0
2026-05-19T17:09:18,531   Skipping link: No binaries permitted for oligo-designer-toolsuite: https://files.pythonhosted.org/packages/35/77/952e8e7ad29b5c9a85e44b8cf1cfc2183cf46f16ad34c1a6bd6ca3bd6f18/oligo_designer_toolsuite-1.0.1-py3-none-any.whl (from https://pypi.org/simple/oligo-designer-toolsuite/) (requires-python:>=3.9)
2026-05-19T17:09:18,532   Found link https://files.pythonhosted.org/packages/cb/32/b4baba23fa70caa0c3c8818112e2114a9e7c1b68f4419f61c43d4a08359f/oligo_designer_toolsuite-1.0.1.tar.gz (from https://pypi.org/simple/oligo-designer-toolsuite/) (requires-python:>=3.9), version: 1.0.1
2026-05-19T17:09:18,533   Skipping link: No binaries permitted for oligo-designer-toolsuite: https://files.pythonhosted.org/packages/23/56/52a14110e15f1e226d92fbe5699f828f53c727219099968f6e415cf4a2b9/oligo_designer_toolsuite-2.0.0-py3-none-any.whl (from https://pypi.org/simple/oligo-designer-toolsuite/) (requires-python:<3.13,>=3.10)
2026-05-19T17:09:18,534   Found link https://files.pythonhosted.org/packages/60/e6/73df1c7f0e086a9a157fcd60d123330b34d7c8a41078788ae8d746e471d9/oligo_designer_toolsuite-2.0.0.tar.gz (from https://pypi.org/simple/oligo-designer-toolsuite/) (requires-python:<3.13,>=3.10), version: 2.0.0
2026-05-19T17:09:18,535   Skipping link: No binaries permitted for oligo-designer-toolsuite: https://files.pythonhosted.org/packages/df/31/62f69036179c9dd13382076263283c7595178c4a1fba7722c0218ef179e5/oligo_designer_toolsuite-2.0.1-py3-none-any.whl (from https://pypi.org/simple/oligo-designer-toolsuite/) (requires-python:<3.13,>=3.10)
2026-05-19T17:09:18,536   Found link https://files.pythonhosted.org/packages/ab/dd/980713594ae4e8d9228919f67a65b059b7ea740d6b308d1bdd48850189a9/oligo_designer_toolsuite-2.0.1.tar.gz (from https://pypi.org/simple/oligo-designer-toolsuite/) (requires-python:<3.13,>=3.10), version: 2.0.1
2026-05-19T17:09:18,537   Skipping link: No binaries permitted for oligo-designer-toolsuite: https://files.pythonhosted.org/packages/aa/84/c2a934bdeb71805a94eedde01b2e45130e1eaa2bf4cf596f33e8e57dd41c/oligo_designer_toolsuite-2.1.0-py3-none-any.whl (from https://pypi.org/simple/oligo-designer-toolsuite/) (requires-python:<3.13,>=3.10)
2026-05-19T17:09:18,538   Found link https://files.pythonhosted.org/packages/1f/9e/c76e63c17a98f8f628e2161b77122cbb8a7d74bcd25b2198e0f13eb3b9e7/oligo_designer_toolsuite-2.1.0.tar.gz (from https://pypi.org/simple/oligo-designer-toolsuite/) (requires-python:<3.13,>=3.10), version: 2.1.0
2026-05-19T17:09:18,538 Fetching project page and analyzing links: https://www.piwheels.org/simple/oligo-designer-toolsuite/
2026-05-19T17:09:18,539 Getting page https://www.piwheels.org/simple/oligo-designer-toolsuite/
2026-05-19T17:09:18,540 Found index url https://www.piwheels.org/simple
2026-05-19T17:09:23,678 WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLZeroReturnError(6, 'TLS/SSL connection has been closed (EOF) (_ssl.c:992)'))': /simple/oligo-designer-toolsuite/
2026-05-19T17:09:28,851 Fetched page https://www.piwheels.org/simple/oligo-designer-toolsuite/ as text/html
2026-05-19T17:09:28,860   Skipping link: No binaries permitted for oligo-designer-toolsuite: https://www.piwheels.org/simple/oligo-designer-toolsuite/oligo_designer_toolsuite-2.0.1-py3-none-any.whl#sha256=a4d72de0783822a847c68b9dbf4223e163efe7c0f9707e1e8d60999d593fabb1 (from https://www.piwheels.org/simple/oligo-designer-toolsuite/) (requires-python:<3.13,>=3.10)
2026-05-19T17:09:28,862   Skipping link: No binaries permitted for oligo-designer-toolsuite: https://www.piwheels.org/simple/oligo-designer-toolsuite/oligo_designer_toolsuite-2.0.0-py3-none-any.whl#sha256=83f27ac3bd1e07a9bdec7f9e62eef370e66b7ea702f68010c17e5d26472a8149 (from https://www.piwheels.org/simple/oligo-designer-toolsuite/) (requires-python:<3.13,>=3.10)
2026-05-19T17:09:28,863   Skipping link: No binaries permitted for oligo-designer-toolsuite: https://archive1.piwheels.org/simple/oligo-designer-toolsuite/oligo_designer_toolsuite-1.0.1-py3-none-any.whl#sha256=2576bcd79b2531811505aa8bfc566ef6b44b1d5c83145323513baeaa6478cd8d (from https://www.piwheels.org/simple/oligo-designer-toolsuite/) (requires-python:>=3.9)
2026-05-19T17:09:28,864   Skipping link: No binaries permitted for oligo-designer-toolsuite: https://archive1.piwheels.org/simple/oligo-designer-toolsuite/oligo_designer_toolsuite-1.0.0-py3-none-any.whl#sha256=66e23b03f70cf6559593867257b7f09ee3e84a2153067c47722fe72f0a10e308 (from https://www.piwheels.org/simple/oligo-designer-toolsuite/) (requires-python:>=3.9)
2026-05-19T17:09:28,865   Skipping link: No binaries permitted for oligo-designer-toolsuite: https://archive1.piwheels.org/simple/oligo-designer-toolsuite/oligo_designer_toolsuite-0.1.3-py3-none-any.whl#sha256=4bf8a7588ba687eb0867396faf6877ef08e980ee4f9fd41fcb5e9c9f9098c939 (from https://www.piwheels.org/simple/oligo-designer-toolsuite/)
2026-05-19T17:09:28,865 Skipping link: not a file: https://www.piwheels.org/simple/oligo-designer-toolsuite/
2026-05-19T17:09:28,866 Skipping link: not a file: https://pypi.org/simple/oligo-designer-toolsuite/
2026-05-19T17:09:28,894 Given no hashes to check 1 links for project 'oligo-designer-toolsuite': discarding no candidates
2026-05-19T17:09:28,920 Collecting oligo-designer-toolsuite==2.1.0
2026-05-19T17:09:28,923   Created temporary directory: /tmp/pip-unpack-p2ikxpg_
2026-05-19T17:09:29,174   Downloading oligo_designer_toolsuite-2.1.0.tar.gz (71.3 MB)
2026-05-19T17:09:48,925   Added oligo-designer-toolsuite==2.1.0 from https://files.pythonhosted.org/packages/1f/9e/c76e63c17a98f8f628e2161b77122cbb8a7d74bcd25b2198e0f13eb3b9e7/oligo_designer_toolsuite-2.1.0.tar.gz to build tracker '/tmp/pip-build-tracker-1cki1shz'
2026-05-19T17:09:48,933   Created temporary directory: /tmp/pip-build-env-pdx72q66
2026-05-19T17:09:48,938   Installing build dependencies: started
2026-05-19T17:09:48,939   Running command pip subprocess to install build dependencies
2026-05-19T17:09:50,094   Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11)
2026-05-19T17:09:50,526   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-05-19T17:09:50,549   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-05-19T17:09:53,721   Collecting setuptools>=61.0
2026-05-19T17:09:53,722     Obtaining dependency information for setuptools>=61.0 from https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl.metadata
2026-05-19T17:09:53,738     Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl.metadata (6.5 kB)
2026-05-19T17:09:54,091   Collecting setuptools_scm[toml]>=6.2
2026-05-19T17:09:54,092     Obtaining dependency information for setuptools_scm[toml]>=6.2 from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl.metadata
2026-05-19T17:09:54,108     Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl.metadata (6.5 kB)
2026-05-19T17:09:54,118   Discarding https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl#sha256=600c37b3fea2bb517f59d76792adae856d0b5ce7735b186e4cde804375251321 (from https://www.piwheels.org/simple/setuptools-scm/) (requires-python:>=3.10): Requested setuptools_scm>=6.2 from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl#sha256=600c37b3fea2bb517f59d76792adae856d0b5ce7735b186e4cde804375251321 has inconsistent Name: expected 'setuptools_scm', but metadata has 'setuptools-scm'
2026-05-19T17:09:54,142     Using cached setuptools_scm-10.0.5-py3-none-any.whl (21 kB)
2026-05-19T17:09:54,228   Collecting vcs-versioning>=1.0.0.dev0
2026-05-19T17:09:54,228     Obtaining dependency information for vcs-versioning>=1.0.0.dev0 from https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl.metadata
2026-05-19T17:09:54,243     Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl.metadata (1.6 kB)
2026-05-19T17:09:54,429   Collecting packaging>=20
2026-05-19T17:09:54,430     Obtaining dependency information for packaging>=20 from https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata
2026-05-19T17:09:54,444     Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata (3.5 kB)
2026-05-19T17:09:54,663   Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB)
2026-05-19T17:09:54,683   Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl (79 kB)
2026-05-19T17:09:54,761   Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB)
2026-05-19T17:09:54,802   Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB)
2026-05-19T17:09:54,832   Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl (79 kB)
2026-05-19T17:09:54,920   Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB)
2026-05-19T17:09:57,674   Installing collected packages: setuptools, packaging, vcs-versioning, setuptools_scm
2026-05-19T17:10:01,316     Creating /tmp/pip-build-env-pdx72q66/overlay/local/bin
2026-05-19T17:10:01,319     changing mode of /tmp/pip-build-env-pdx72q66/overlay/local/bin/vcs-versioning to 755
2026-05-19T17:10:01,442     changing mode of /tmp/pip-build-env-pdx72q66/overlay/local/bin/setuptools-scm to 755
2026-05-19T17:10:01,471   Successfully installed packaging-26.2 setuptools-82.0.1 setuptools_scm-10.0.5 vcs-versioning-1.1.1
2026-05-19T17:10:01,765   Installing build dependencies: finished with status 'done'
2026-05-19T17:10:01,773   Getting requirements to build wheel: started
2026-05-19T17:10:01,774   Running command Getting requirements to build wheel
2026-05-19T17:10:02,618   /tmp/pip-build-env-pdx72q66/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2026-05-19T17:10:02,618   !!

2026-05-19T17:10:02,619           ********************************************************************************
2026-05-19T17:10:02,620           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2026-05-19T17:10:02,621           By 2027-Feb-18, you need to update your project and remove deprecated calls
2026-05-19T17:10:02,621           or your builds will no longer be supported.

2026-05-19T17:10:02,622           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-05-19T17:10:02,623           ********************************************************************************

2026-05-19T17:10:02,623   !!
2026-05-19T17:10:02,624     corresp(dist, value, root_dir)
2026-05-19T17:10:02,696   /tmp/pip-build-env-pdx72q66/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-05-19T17:10:02,697   !!

2026-05-19T17:10:02,698           ********************************************************************************
2026-05-19T17:10:02,698           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-05-19T17:10:02,700           License :: OSI Approved :: MIT License

2026-05-19T17:10:02,701           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-05-19T17:10:02,702           ********************************************************************************

2026-05-19T17:10:02,703   !!
2026-05-19T17:10:02,704     dist._finalize_license_expression()
2026-05-19T17:10:02,705   /tmp/pip-build-env-pdx72q66/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-05-19T17:10:02,706   !!

2026-05-19T17:10:02,707           ********************************************************************************
2026-05-19T17:10:02,708           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-05-19T17:10:02,709           License :: OSI Approved :: MIT License

2026-05-19T17:10:02,710           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-05-19T17:10:02,710           ********************************************************************************

2026-05-19T17:10:02,711   !!
2026-05-19T17:10:02,712     self._finalize_license_expression()
2026-05-19T17:10:02,714   running egg_info
2026-05-19T17:10:02,722   writing oligo_designer_toolsuite.egg-info/PKG-INFO
2026-05-19T17:10:02,728   writing dependency_links to oligo_designer_toolsuite.egg-info/dependency_links.txt
2026-05-19T17:10:02,730   writing entry points to oligo_designer_toolsuite.egg-info/entry_points.txt
2026-05-19T17:10:02,734   writing requirements to oligo_designer_toolsuite.egg-info/requires.txt
2026-05-19T17:10:02,735   writing top-level names to oligo_designer_toolsuite.egg-info/top_level.txt
2026-05-19T17:10:02,771   /tmp/pip-build-env-pdx72q66/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly.
2026-05-19T17:10:02,771     return get_active_overrides().subprocess_timeout
2026-05-19T17:10:02,779   listing git files failed - pretending there aren't any
2026-05-19T17:10:02,784   reading manifest file 'oligo_designer_toolsuite.egg-info/SOURCES.txt'
2026-05-19T17:10:02,810   reading manifest template 'MANIFEST.in'
2026-05-19T17:10:02,815   no previously-included directories found matching 'tests'
2026-05-19T17:10:02,816   no previously-included directories found matching 'docs'
2026-05-19T17:10:02,817   no previously-included directories found matching 'tutorials'
2026-05-19T17:10:02,817   adding license file 'LICENSE'
2026-05-19T17:10:02,823   writing manifest file 'oligo_designer_toolsuite.egg-info/SOURCES.txt'
2026-05-19T17:10:02,928   Getting requirements to build wheel: finished with status 'done'
2026-05-19T17:10:02,931   Created temporary directory: /tmp/pip-modern-metadata-284rsn7n
2026-05-19T17:10:02,933   Preparing metadata (pyproject.toml): started
2026-05-19T17:10:02,934   Running command Preparing metadata (pyproject.toml)
2026-05-19T17:10:03,600   /tmp/pip-build-env-pdx72q66/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2026-05-19T17:10:03,600   !!

2026-05-19T17:10:03,601           ********************************************************************************
2026-05-19T17:10:03,602           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2026-05-19T17:10:03,603           By 2027-Feb-18, you need to update your project and remove deprecated calls
2026-05-19T17:10:03,604           or your builds will no longer be supported.

2026-05-19T17:10:03,605           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-05-19T17:10:03,606           ********************************************************************************

2026-05-19T17:10:03,607   !!
2026-05-19T17:10:03,608     corresp(dist, value, root_dir)
2026-05-19T17:10:03,677   /tmp/pip-build-env-pdx72q66/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-05-19T17:10:03,677   !!

2026-05-19T17:10:03,678           ********************************************************************************
2026-05-19T17:10:03,679           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-05-19T17:10:03,680           License :: OSI Approved :: MIT License

2026-05-19T17:10:03,681           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-05-19T17:10:03,682           ********************************************************************************

2026-05-19T17:10:03,683   !!
2026-05-19T17:10:03,684     dist._finalize_license_expression()
2026-05-19T17:10:03,686   /tmp/pip-build-env-pdx72q66/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-05-19T17:10:03,687   !!

2026-05-19T17:10:03,688           ********************************************************************************
2026-05-19T17:10:03,689           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-05-19T17:10:03,690           License :: OSI Approved :: MIT License

2026-05-19T17:10:03,691           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-05-19T17:10:03,691           ********************************************************************************

2026-05-19T17:10:03,693   !!
2026-05-19T17:10:03,693     self._finalize_license_expression()
2026-05-19T17:10:03,694   running dist_info
2026-05-19T17:10:03,708   creating /tmp/pip-modern-metadata-284rsn7n/oligo_designer_toolsuite.egg-info
2026-05-19T17:10:03,709   writing /tmp/pip-modern-metadata-284rsn7n/oligo_designer_toolsuite.egg-info/PKG-INFO
2026-05-19T17:10:03,715   writing dependency_links to /tmp/pip-modern-metadata-284rsn7n/oligo_designer_toolsuite.egg-info/dependency_links.txt
2026-05-19T17:10:03,717   writing entry points to /tmp/pip-modern-metadata-284rsn7n/oligo_designer_toolsuite.egg-info/entry_points.txt
2026-05-19T17:10:03,720   writing requirements to /tmp/pip-modern-metadata-284rsn7n/oligo_designer_toolsuite.egg-info/requires.txt
2026-05-19T17:10:03,721   writing top-level names to /tmp/pip-modern-metadata-284rsn7n/oligo_designer_toolsuite.egg-info/top_level.txt
2026-05-19T17:10:03,722   writing manifest file '/tmp/pip-modern-metadata-284rsn7n/oligo_designer_toolsuite.egg-info/SOURCES.txt'
2026-05-19T17:10:03,752   /tmp/pip-build-env-pdx72q66/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly.
2026-05-19T17:10:03,753     return get_active_overrides().subprocess_timeout
2026-05-19T17:10:03,759   listing git files failed - pretending there aren't any
2026-05-19T17:10:03,763   reading manifest file '/tmp/pip-modern-metadata-284rsn7n/oligo_designer_toolsuite.egg-info/SOURCES.txt'
2026-05-19T17:10:03,765   reading manifest template 'MANIFEST.in'
2026-05-19T17:10:03,769   no previously-included directories found matching 'tests'
2026-05-19T17:10:03,769   no previously-included directories found matching 'docs'
2026-05-19T17:10:03,770   no previously-included directories found matching 'tutorials'
2026-05-19T17:10:03,771   adding license file 'LICENSE'
2026-05-19T17:10:03,774   writing manifest file '/tmp/pip-modern-metadata-284rsn7n/oligo_designer_toolsuite.egg-info/SOURCES.txt'
2026-05-19T17:10:03,775   creating '/tmp/pip-modern-metadata-284rsn7n/oligo_designer_toolsuite-2.1.0.dist-info'
2026-05-19T17:10:03,908   Preparing metadata (pyproject.toml): finished with status 'done'
2026-05-19T17:10:03,914   Source in /tmp/pip-wheel-rj1w0os0/oligo-designer-toolsuite_6ee335d4fd914c4b9b7f12f02f78dcca has version 2.1.0, which satisfies requirement oligo-designer-toolsuite==2.1.0 from https://files.pythonhosted.org/packages/1f/9e/c76e63c17a98f8f628e2161b77122cbb8a7d74bcd25b2198e0f13eb3b9e7/oligo_designer_toolsuite-2.1.0.tar.gz
2026-05-19T17:10:03,915   Removed oligo-designer-toolsuite==2.1.0 from https://files.pythonhosted.org/packages/1f/9e/c76e63c17a98f8f628e2161b77122cbb8a7d74bcd25b2198e0f13eb3b9e7/oligo_designer_toolsuite-2.1.0.tar.gz from build tracker '/tmp/pip-build-tracker-1cki1shz'
2026-05-19T17:10:03,922 Created temporary directory: /tmp/pip-unpack-sjjat8hs
2026-05-19T17:10:03,923 Building wheels for collected packages: oligo-designer-toolsuite
2026-05-19T17:10:03,927   Created temporary directory: /tmp/pip-wheel-_ixonsny
2026-05-19T17:10:03,928   Destination directory: /tmp/pip-wheel-_ixonsny
2026-05-19T17:10:03,930   Building wheel for oligo-designer-toolsuite (pyproject.toml): started
2026-05-19T17:10:03,931   Running command Building wheel for oligo-designer-toolsuite (pyproject.toml)
2026-05-19T17:10:04,572   /tmp/pip-build-env-pdx72q66/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2026-05-19T17:10:04,572   !!

2026-05-19T17:10:04,573           ********************************************************************************
2026-05-19T17:10:04,574           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2026-05-19T17:10:04,575           By 2027-Feb-18, you need to update your project and remove deprecated calls
2026-05-19T17:10:04,576           or your builds will no longer be supported.

2026-05-19T17:10:04,577           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-05-19T17:10:04,577           ********************************************************************************

2026-05-19T17:10:04,578   !!
2026-05-19T17:10:04,579     corresp(dist, value, root_dir)
2026-05-19T17:10:04,641   /tmp/pip-build-env-pdx72q66/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-05-19T17:10:04,641   !!

2026-05-19T17:10:04,642           ********************************************************************************
2026-05-19T17:10:04,643           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-05-19T17:10:04,644           License :: OSI Approved :: MIT License

2026-05-19T17:10:04,645           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-05-19T17:10:04,645           ********************************************************************************

2026-05-19T17:10:04,646   !!
2026-05-19T17:10:04,647     dist._finalize_license_expression()
2026-05-19T17:10:04,651   /tmp/pip-build-env-pdx72q66/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-05-19T17:10:04,652   !!

2026-05-19T17:10:04,653           ********************************************************************************
2026-05-19T17:10:04,653           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-05-19T17:10:04,654           License :: OSI Approved :: MIT License

2026-05-19T17:10:04,656           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-05-19T17:10:04,656           ********************************************************************************

2026-05-19T17:10:04,657   !!
2026-05-19T17:10:04,658     self._finalize_license_expression()
2026-05-19T17:10:04,658   running bdist_wheel
2026-05-19T17:10:04,679   running build
2026-05-19T17:10:04,680   running build_py
2026-05-19T17:10:04,681   creating build/lib/oligo_designer_toolsuite
2026-05-19T17:10:04,684   copying oligo_designer_toolsuite/_version.py -> build/lib/oligo_designer_toolsuite
2026-05-19T17:10:04,685   copying oligo_designer_toolsuite/_constants.py -> build/lib/oligo_designer_toolsuite
2026-05-19T17:10:04,687   copying oligo_designer_toolsuite/__init__.py -> build/lib/oligo_designer_toolsuite
2026-05-19T17:10:04,689   copying oligo_designer_toolsuite/_exceptions.py -> build/lib/oligo_designer_toolsuite
2026-05-19T17:10:04,691   running egg_info
2026-05-19T17:10:04,704   writing oligo_designer_toolsuite.egg-info/PKG-INFO
2026-05-19T17:10:04,709   writing dependency_links to oligo_designer_toolsuite.egg-info/dependency_links.txt
2026-05-19T17:10:04,711   writing entry points to oligo_designer_toolsuite.egg-info/entry_points.txt
2026-05-19T17:10:04,714   writing requirements to oligo_designer_toolsuite.egg-info/requires.txt
2026-05-19T17:10:04,715   writing top-level names to oligo_designer_toolsuite.egg-info/top_level.txt
2026-05-19T17:10:04,739   /tmp/pip-build-env-pdx72q66/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly.
2026-05-19T17:10:04,740     return get_active_overrides().subprocess_timeout
2026-05-19T17:10:04,746   listing git files failed - pretending there aren't any
2026-05-19T17:10:04,750   reading manifest file 'oligo_designer_toolsuite.egg-info/SOURCES.txt'
2026-05-19T17:10:04,757   reading manifest template 'MANIFEST.in'
2026-05-19T17:10:04,761   no previously-included directories found matching 'tests'
2026-05-19T17:10:04,762   no previously-included directories found matching 'docs'
2026-05-19T17:10:04,763   no previously-included directories found matching 'tutorials'
2026-05-19T17:10:04,763   adding license file 'LICENSE'
2026-05-19T17:10:04,769   writing manifest file 'oligo_designer_toolsuite.egg-info/SOURCES.txt'
2026-05-19T17:10:04,773   /tmp/pip-build-env-pdx72q66/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'oligo_designer_toolsuite.config' is absent from the `packages` configuration.
2026-05-19T17:10:04,773   !!

2026-05-19T17:10:04,774           ********************************************************************************
2026-05-19T17:10:04,775           ############################
2026-05-19T17:10:04,775           # Package would be ignored #
2026-05-19T17:10:04,775           ############################
2026-05-19T17:10:04,776           Python recognizes 'oligo_designer_toolsuite.config' as an importable package[^1],
2026-05-19T17:10:04,776           but it is absent from setuptools' `packages` configuration.

2026-05-19T17:10:04,777           This leads to an ambiguous overall configuration. If you want to distribute this
2026-05-19T17:10:04,778           package, please make sure that 'oligo_designer_toolsuite.config' is explicitly added
2026-05-19T17:10:04,778           to the `packages` configuration field.

2026-05-19T17:10:04,779           Alternatively, you can also rely on setuptools' discovery methods
2026-05-19T17:10:04,780           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2026-05-19T17:10:04,780           instead of `find_packages(...)`/`find:`).

2026-05-19T17:10:04,781           You can read more about "package discovery" on setuptools documentation page:

2026-05-19T17:10:04,782           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2026-05-19T17:10:04,784           If you don't want 'oligo_designer_toolsuite.config' to be distributed and are
2026-05-19T17:10:04,784           already explicitly excluding 'oligo_designer_toolsuite.config' via
2026-05-19T17:10:04,785           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2026-05-19T17:10:04,785           you can try to use `exclude_package_data`, or `include-package-data=False` in
2026-05-19T17:10:04,786           combination with a more fine grained `package-data` configuration.

2026-05-19T17:10:04,787           You can read more about "package data files" on setuptools documentation page:

2026-05-19T17:10:04,788           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2026-05-19T17:10:04,789           [^1]: For Python, any directory (with suitable naming) can be imported,
2026-05-19T17:10:04,790                 even if it does not contain any `.py` files.
2026-05-19T17:10:04,791                 On the other hand, currently there is no concept of package data
2026-05-19T17:10:04,791                 directory, all directories are treated like packages.
2026-05-19T17:10:04,791           ********************************************************************************

2026-05-19T17:10:04,792   !!
2026-05-19T17:10:04,793     check.warn(importable)
2026-05-19T17:10:04,794   /tmp/pip-build-env-pdx72q66/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'oligo_designer_toolsuite.config.overrides' is absent from the `packages` configuration.
2026-05-19T17:10:04,794   !!

2026-05-19T17:10:04,795           ********************************************************************************
2026-05-19T17:10:04,796           ############################
2026-05-19T17:10:04,796           # Package would be ignored #
2026-05-19T17:10:04,797           ############################
2026-05-19T17:10:04,797           Python recognizes 'oligo_designer_toolsuite.config.overrides' as an importable package[^1],
2026-05-19T17:10:04,798           but it is absent from setuptools' `packages` configuration.

2026-05-19T17:10:04,799           This leads to an ambiguous overall configuration. If you want to distribute this
2026-05-19T17:10:04,799           package, please make sure that 'oligo_designer_toolsuite.config.overrides' is explicitly added
2026-05-19T17:10:04,800           to the `packages` configuration field.

2026-05-19T17:10:04,800           Alternatively, you can also rely on setuptools' discovery methods
2026-05-19T17:10:04,801           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2026-05-19T17:10:04,801           instead of `find_packages(...)`/`find:`).

2026-05-19T17:10:04,802           You can read more about "package discovery" on setuptools documentation page:

2026-05-19T17:10:04,803           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2026-05-19T17:10:04,804           If you don't want 'oligo_designer_toolsuite.config.overrides' to be distributed and are
2026-05-19T17:10:04,804           already explicitly excluding 'oligo_designer_toolsuite.config.overrides' via
2026-05-19T17:10:04,805           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2026-05-19T17:10:04,805           you can try to use `exclude_package_data`, or `include-package-data=False` in
2026-05-19T17:10:04,805           combination with a more fine grained `package-data` configuration.

2026-05-19T17:10:04,806           You can read more about "package data files" on setuptools documentation page:

2026-05-19T17:10:04,807           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2026-05-19T17:10:04,809           [^1]: For Python, any directory (with suitable naming) can be imported,
2026-05-19T17:10:04,809                 even if it does not contain any `.py` files.
2026-05-19T17:10:04,809                 On the other hand, currently there is no concept of package data
2026-05-19T17:10:04,810                 directory, all directories are treated like packages.
2026-05-19T17:10:04,810           ********************************************************************************

2026-05-19T17:10:04,811   !!
2026-05-19T17:10:04,812     check.warn(importable)
2026-05-19T17:10:04,812   /tmp/pip-build-env-pdx72q66/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'oligo_designer_toolsuite.config.pipelines' is absent from the `packages` configuration.
2026-05-19T17:10:04,813   !!

2026-05-19T17:10:04,814           ********************************************************************************
2026-05-19T17:10:04,814           ############################
2026-05-19T17:10:04,815           # Package would be ignored #
2026-05-19T17:10:04,815           ############################
2026-05-19T17:10:04,816           Python recognizes 'oligo_designer_toolsuite.config.pipelines' as an importable package[^1],
2026-05-19T17:10:04,816           but it is absent from setuptools' `packages` configuration.

2026-05-19T17:10:04,817           This leads to an ambiguous overall configuration. If you want to distribute this
2026-05-19T17:10:04,818           package, please make sure that 'oligo_designer_toolsuite.config.pipelines' is explicitly added
2026-05-19T17:10:04,818           to the `packages` configuration field.

2026-05-19T17:10:04,819           Alternatively, you can also rely on setuptools' discovery methods
2026-05-19T17:10:04,820           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2026-05-19T17:10:04,820           instead of `find_packages(...)`/`find:`).

2026-05-19T17:10:04,821           You can read more about "package discovery" on setuptools documentation page:

2026-05-19T17:10:04,823           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2026-05-19T17:10:04,824           If you don't want 'oligo_designer_toolsuite.config.pipelines' to be distributed and are
2026-05-19T17:10:04,824           already explicitly excluding 'oligo_designer_toolsuite.config.pipelines' via
2026-05-19T17:10:04,825           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2026-05-19T17:10:04,825           you can try to use `exclude_package_data`, or `include-package-data=False` in
2026-05-19T17:10:04,826           combination with a more fine grained `package-data` configuration.

2026-05-19T17:10:04,827           You can read more about "package data files" on setuptools documentation page:

2026-05-19T17:10:04,828           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2026-05-19T17:10:04,829           [^1]: For Python, any directory (with suitable naming) can be imported,
2026-05-19T17:10:04,829                 even if it does not contain any `.py` files.
2026-05-19T17:10:04,830                 On the other hand, currently there is no concept of package data
2026-05-19T17:10:04,830                 directory, all directories are treated like packages.
2026-05-19T17:10:04,831           ********************************************************************************

2026-05-19T17:10:04,831   !!
2026-05-19T17:10:04,832     check.warn(importable)
2026-05-19T17:10:04,832   /tmp/pip-build-env-pdx72q66/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'oligo_designer_toolsuite.database' is absent from the `packages` configuration.
2026-05-19T17:10:04,833   !!

2026-05-19T17:10:04,834           ********************************************************************************
2026-05-19T17:10:04,834           ############################
2026-05-19T17:10:04,835           # Package would be ignored #
2026-05-19T17:10:04,835           ############################
2026-05-19T17:10:04,836           Python recognizes 'oligo_designer_toolsuite.database' as an importable package[^1],
2026-05-19T17:10:04,836           but it is absent from setuptools' `packages` configuration.

2026-05-19T17:10:04,837           This leads to an ambiguous overall configuration. If you want to distribute this
2026-05-19T17:10:04,838           package, please make sure that 'oligo_designer_toolsuite.database' is explicitly added
2026-05-19T17:10:04,838           to the `packages` configuration field.

2026-05-19T17:10:04,839           Alternatively, you can also rely on setuptools' discovery methods
2026-05-19T17:10:04,839           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2026-05-19T17:10:04,840           instead of `find_packages(...)`/`find:`).

2026-05-19T17:10:04,841           You can read more about "package discovery" on setuptools documentation page:

2026-05-19T17:10:04,842           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2026-05-19T17:10:04,843           If you don't want 'oligo_designer_toolsuite.database' to be distributed and are
2026-05-19T17:10:04,843           already explicitly excluding 'oligo_designer_toolsuite.database' via
2026-05-19T17:10:04,844           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2026-05-19T17:10:04,844           you can try to use `exclude_package_data`, or `include-package-data=False` in
2026-05-19T17:10:04,845           combination with a more fine grained `package-data` configuration.

2026-05-19T17:10:04,846           You can read more about "package data files" on setuptools documentation page:

2026-05-19T17:10:04,847           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2026-05-19T17:10:04,848           [^1]: For Python, any directory (with suitable naming) can be imported,
2026-05-19T17:10:04,849                 even if it does not contain any `.py` files.
2026-05-19T17:10:04,849                 On the other hand, currently there is no concept of package data
2026-05-19T17:10:04,850                 directory, all directories are treated like packages.
2026-05-19T17:10:04,850           ********************************************************************************

2026-05-19T17:10:04,851   !!
2026-05-19T17:10:04,852     check.warn(importable)
2026-05-19T17:10:04,852   /tmp/pip-build-env-pdx72q66/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'oligo_designer_toolsuite.oligo_efficiency_filter' is absent from the `packages` configuration.
2026-05-19T17:10:04,853   !!

2026-05-19T17:10:04,854           ********************************************************************************
2026-05-19T17:10:04,854           ############################
2026-05-19T17:10:04,855           # Package would be ignored #
2026-05-19T17:10:04,855           ############################
2026-05-19T17:10:04,856           Python recognizes 'oligo_designer_toolsuite.oligo_efficiency_filter' as an importable package[^1],
2026-05-19T17:10:04,856           but it is absent from setuptools' `packages` configuration.

2026-05-19T17:10:04,857           This leads to an ambiguous overall configuration. If you want to distribute this
2026-05-19T17:10:04,857           package, please make sure that 'oligo_designer_toolsuite.oligo_efficiency_filter' is explicitly added
2026-05-19T17:10:04,858           to the `packages` configuration field.

2026-05-19T17:10:04,859           Alternatively, you can also rely on setuptools' discovery methods
2026-05-19T17:10:04,859           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2026-05-19T17:10:04,860           instead of `find_packages(...)`/`find:`).

2026-05-19T17:10:04,860           You can read more about "package discovery" on setuptools documentation page:

2026-05-19T17:10:04,861           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2026-05-19T17:10:04,862           If you don't want 'oligo_designer_toolsuite.oligo_efficiency_filter' to be distributed and are
2026-05-19T17:10:04,863           already explicitly excluding 'oligo_designer_toolsuite.oligo_efficiency_filter' via
2026-05-19T17:10:04,863           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2026-05-19T17:10:04,864           you can try to use `exclude_package_data`, or `include-package-data=False` in
2026-05-19T17:10:04,864           combination with a more fine grained `package-data` configuration.

2026-05-19T17:10:04,865           You can read more about "package data files" on setuptools documentation page:

2026-05-19T17:10:04,866           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2026-05-19T17:10:04,868           [^1]: For Python, any directory (with suitable naming) can be imported,
2026-05-19T17:10:04,868                 even if it does not contain any `.py` files.
2026-05-19T17:10:04,868                 On the other hand, currently there is no concept of package data
2026-05-19T17:10:04,869                 directory, all directories are treated like packages.
2026-05-19T17:10:04,869           ********************************************************************************

2026-05-19T17:10:04,871   !!
2026-05-19T17:10:04,871     check.warn(importable)
2026-05-19T17:10:04,871   /tmp/pip-build-env-pdx72q66/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'oligo_designer_toolsuite.oligo_property_calculator' is absent from the `packages` configuration.
2026-05-19T17:10:04,872   !!

2026-05-19T17:10:04,873           ********************************************************************************
2026-05-19T17:10:04,873           ############################
2026-05-19T17:10:04,874           # Package would be ignored #
2026-05-19T17:10:04,875           ############################
2026-05-19T17:10:04,875           Python recognizes 'oligo_designer_toolsuite.oligo_property_calculator' as an importable package[^1],
2026-05-19T17:10:04,876           but it is absent from setuptools' `packages` configuration.

2026-05-19T17:10:04,877           This leads to an ambiguous overall configuration. If you want to distribute this
2026-05-19T17:10:04,877           package, please make sure that 'oligo_designer_toolsuite.oligo_property_calculator' is explicitly added
2026-05-19T17:10:04,878           to the `packages` configuration field.

2026-05-19T17:10:04,879           Alternatively, you can also rely on setuptools' discovery methods
2026-05-19T17:10:04,879           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2026-05-19T17:10:04,880           instead of `find_packages(...)`/`find:`).

2026-05-19T17:10:04,881           You can read more about "package discovery" on setuptools documentation page:

2026-05-19T17:10:04,882           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2026-05-19T17:10:04,882           If you don't want 'oligo_designer_toolsuite.oligo_property_calculator' to be distributed and are
2026-05-19T17:10:04,883           already explicitly excluding 'oligo_designer_toolsuite.oligo_property_calculator' via
2026-05-19T17:10:04,883           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2026-05-19T17:10:04,884           you can try to use `exclude_package_data`, or `include-package-data=False` in
2026-05-19T17:10:04,884           combination with a more fine grained `package-data` configuration.

2026-05-19T17:10:04,885           You can read more about "package data files" on setuptools documentation page:

2026-05-19T17:10:04,886           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2026-05-19T17:10:04,887           [^1]: For Python, any directory (with suitable naming) can be imported,
2026-05-19T17:10:04,887                 even if it does not contain any `.py` files.
2026-05-19T17:10:04,888                 On the other hand, currently there is no concept of package data
2026-05-19T17:10:04,888                 directory, all directories are treated like packages.
2026-05-19T17:10:04,889           ********************************************************************************

2026-05-19T17:10:04,890   !!
2026-05-19T17:10:04,890     check.warn(importable)
2026-05-19T17:10:04,891   /tmp/pip-build-env-pdx72q66/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'oligo_designer_toolsuite.oligo_property_filter' is absent from the `packages` configuration.
2026-05-19T17:10:04,891   !!

2026-05-19T17:10:04,892           ********************************************************************************
2026-05-19T17:10:04,893           ############################
2026-05-19T17:10:04,893           # Package would be ignored #
2026-05-19T17:10:04,893           ############################
2026-05-19T17:10:04,894           Python recognizes 'oligo_designer_toolsuite.oligo_property_filter' as an importable package[^1],
2026-05-19T17:10:04,894           but it is absent from setuptools' `packages` configuration.

2026-05-19T17:10:04,895           This leads to an ambiguous overall configuration. If you want to distribute this
2026-05-19T17:10:04,896           package, please make sure that 'oligo_designer_toolsuite.oligo_property_filter' is explicitly added
2026-05-19T17:10:04,897           to the `packages` configuration field.

2026-05-19T17:10:04,897           Alternatively, you can also rely on setuptools' discovery methods
2026-05-19T17:10:04,898           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2026-05-19T17:10:04,898           instead of `find_packages(...)`/`find:`).

2026-05-19T17:10:04,899           You can read more about "package discovery" on setuptools documentation page:

2026-05-19T17:10:04,900           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2026-05-19T17:10:04,901           If you don't want 'oligo_designer_toolsuite.oligo_property_filter' to be distributed and are
2026-05-19T17:10:04,902           already explicitly excluding 'oligo_designer_toolsuite.oligo_property_filter' via
2026-05-19T17:10:04,902           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2026-05-19T17:10:04,903           you can try to use `exclude_package_data`, or `include-package-data=False` in
2026-05-19T17:10:04,904           combination with a more fine grained `package-data` configuration.

2026-05-19T17:10:04,905           You can read more about "package data files" on setuptools documentation page:

2026-05-19T17:10:04,906           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2026-05-19T17:10:04,907           [^1]: For Python, any directory (with suitable naming) can be imported,
2026-05-19T17:10:04,908                 even if it does not contain any `.py` files.
2026-05-19T17:10:04,908                 On the other hand, currently there is no concept of package data
2026-05-19T17:10:04,908                 directory, all directories are treated like packages.
2026-05-19T17:10:04,909           ********************************************************************************

2026-05-19T17:10:04,910   !!
2026-05-19T17:10:04,910     check.warn(importable)
2026-05-19T17:10:04,911   /tmp/pip-build-env-pdx72q66/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'oligo_designer_toolsuite.oligo_selection' is absent from the `packages` configuration.
2026-05-19T17:10:04,911   !!

2026-05-19T17:10:04,912           ********************************************************************************
2026-05-19T17:10:04,912           ############################
2026-05-19T17:10:04,913           # Package would be ignored #
2026-05-19T17:10:04,913           ############################
2026-05-19T17:10:04,914           Python recognizes 'oligo_designer_toolsuite.oligo_selection' as an importable package[^1],
2026-05-19T17:10:04,914           but it is absent from setuptools' `packages` configuration.

2026-05-19T17:10:04,915           This leads to an ambiguous overall configuration. If you want to distribute this
2026-05-19T17:10:04,915           package, please make sure that 'oligo_designer_toolsuite.oligo_selection' is explicitly added
2026-05-19T17:10:04,916           to the `packages` configuration field.

2026-05-19T17:10:04,917           Alternatively, you can also rely on setuptools' discovery methods
2026-05-19T17:10:04,917           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2026-05-19T17:10:04,918           instead of `find_packages(...)`/`find:`).

2026-05-19T17:10:04,919           You can read more about "package discovery" on setuptools documentation page:

2026-05-19T17:10:04,920           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2026-05-19T17:10:04,921           If you don't want 'oligo_designer_toolsuite.oligo_selection' to be distributed and are
2026-05-19T17:10:04,921           already explicitly excluding 'oligo_designer_toolsuite.oligo_selection' via
2026-05-19T17:10:04,922           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2026-05-19T17:10:04,922           you can try to use `exclude_package_data`, or `include-package-data=False` in
2026-05-19T17:10:04,923           combination with a more fine grained `package-data` configuration.

2026-05-19T17:10:04,924           You can read more about "package data files" on setuptools documentation page:

2026-05-19T17:10:04,925           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2026-05-19T17:10:04,926           [^1]: For Python, any directory (with suitable naming) can be imported,
2026-05-19T17:10:04,927                 even if it does not contain any `.py` files.
2026-05-19T17:10:04,927                 On the other hand, currently there is no concept of package data
2026-05-19T17:10:04,928                 directory, all directories are treated like packages.
2026-05-19T17:10:04,928           ********************************************************************************

2026-05-19T17:10:04,929   !!
2026-05-19T17:10:04,930     check.warn(importable)
2026-05-19T17:10:04,930   /tmp/pip-build-env-pdx72q66/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'oligo_designer_toolsuite.oligo_specificity_filter' is absent from the `packages` configuration.
2026-05-19T17:10:04,931   !!

2026-05-19T17:10:04,932           ********************************************************************************
2026-05-19T17:10:04,932           ############################
2026-05-19T17:10:04,933           # Package would be ignored #
2026-05-19T17:10:04,934           ############################
2026-05-19T17:10:04,934           Python recognizes 'oligo_designer_toolsuite.oligo_specificity_filter' as an importable package[^1],
2026-05-19T17:10:04,934           but it is absent from setuptools' `packages` configuration.

2026-05-19T17:10:04,935           This leads to an ambiguous overall configuration. If you want to distribute this
2026-05-19T17:10:04,936           package, please make sure that 'oligo_designer_toolsuite.oligo_specificity_filter' is explicitly added
2026-05-19T17:10:04,936           to the `packages` configuration field.

2026-05-19T17:10:04,937           Alternatively, you can also rely on setuptools' discovery methods
2026-05-19T17:10:04,938           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2026-05-19T17:10:04,938           instead of `find_packages(...)`/`find:`).

2026-05-19T17:10:04,939           You can read more about "package discovery" on setuptools documentation page:

2026-05-19T17:10:04,940           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2026-05-19T17:10:04,941           If you don't want 'oligo_designer_toolsuite.oligo_specificity_filter' to be distributed and are
2026-05-19T17:10:04,941           already explicitly excluding 'oligo_designer_toolsuite.oligo_specificity_filter' via
2026-05-19T17:10:04,942           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2026-05-19T17:10:04,942           you can try to use `exclude_package_data`, or `include-package-data=False` in
2026-05-19T17:10:04,943           combination with a more fine grained `package-data` configuration.

2026-05-19T17:10:04,944           You can read more about "package data files" on setuptools documentation page:

2026-05-19T17:10:04,945           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2026-05-19T17:10:04,946           [^1]: For Python, any directory (with suitable naming) can be imported,
2026-05-19T17:10:04,947                 even if it does not contain any `.py` files.
2026-05-19T17:10:04,947                 On the other hand, currently there is no concept of package data
2026-05-19T17:10:04,948                 directory, all directories are treated like packages.
2026-05-19T17:10:04,949           ********************************************************************************

2026-05-19T17:10:04,950   !!
2026-05-19T17:10:04,950     check.warn(importable)
2026-05-19T17:10:04,951   /tmp/pip-build-env-pdx72q66/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'oligo_designer_toolsuite.pipelines' is absent from the `packages` configuration.
2026-05-19T17:10:04,952   !!

2026-05-19T17:10:04,953           ********************************************************************************
2026-05-19T17:10:04,953           ############################
2026-05-19T17:10:04,954           # Package would be ignored #
2026-05-19T17:10:04,954           ############################
2026-05-19T17:10:04,955           Python recognizes 'oligo_designer_toolsuite.pipelines' as an importable package[^1],
2026-05-19T17:10:04,955           but it is absent from setuptools' `packages` configuration.

2026-05-19T17:10:04,956           This leads to an ambiguous overall configuration. If you want to distribute this
2026-05-19T17:10:04,957           package, please make sure that 'oligo_designer_toolsuite.pipelines' is explicitly added
2026-05-19T17:10:04,957           to the `packages` configuration field.

2026-05-19T17:10:04,958           Alternatively, you can also rely on setuptools' discovery methods
2026-05-19T17:10:04,959           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2026-05-19T17:10:04,959           instead of `find_packages(...)`/`find:`).

2026-05-19T17:10:04,960           You can read more about "package discovery" on setuptools documentation page:

2026-05-19T17:10:04,962           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2026-05-19T17:10:04,963           If you don't want 'oligo_designer_toolsuite.pipelines' to be distributed and are
2026-05-19T17:10:04,963           already explicitly excluding 'oligo_designer_toolsuite.pipelines' via
2026-05-19T17:10:04,964           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2026-05-19T17:10:04,964           you can try to use `exclude_package_data`, or `include-package-data=False` in
2026-05-19T17:10:04,964           combination with a more fine grained `package-data` configuration.

2026-05-19T17:10:04,965           You can read more about "package data files" on setuptools documentation page:

2026-05-19T17:10:04,968           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2026-05-19T17:10:04,969           [^1]: For Python, any directory (with suitable naming) can be imported,
2026-05-19T17:10:04,969                 even if it does not contain any `.py` files.
2026-05-19T17:10:04,970                 On the other hand, currently there is no concept of package data
2026-05-19T17:10:04,970                 directory, all directories are treated like packages.
2026-05-19T17:10:04,971           ********************************************************************************

2026-05-19T17:10:04,972   !!
2026-05-19T17:10:04,972     check.warn(importable)
2026-05-19T17:10:04,973   /tmp/pip-build-env-pdx72q66/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'oligo_designer_toolsuite.sequence_generator' is absent from the `packages` configuration.
2026-05-19T17:10:04,973   !!

2026-05-19T17:10:04,974           ********************************************************************************
2026-05-19T17:10:04,974           ############################
2026-05-19T17:10:04,975           # Package would be ignored #
2026-05-19T17:10:04,975           ############################
2026-05-19T17:10:04,976           Python recognizes 'oligo_designer_toolsuite.sequence_generator' as an importable package[^1],
2026-05-19T17:10:04,977           but it is absent from setuptools' `packages` configuration.

2026-05-19T17:10:04,978           This leads to an ambiguous overall configuration. If you want to distribute this
2026-05-19T17:10:04,978           package, please make sure that 'oligo_designer_toolsuite.sequence_generator' is explicitly added
2026-05-19T17:10:04,979           to the `packages` configuration field.

2026-05-19T17:10:04,980           Alternatively, you can also rely on setuptools' discovery methods
2026-05-19T17:10:04,980           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2026-05-19T17:10:04,981           instead of `find_packages(...)`/`find:`).

2026-05-19T17:10:04,982           You can read more about "package discovery" on setuptools documentation page:

2026-05-19T17:10:04,983           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2026-05-19T17:10:04,984           If you don't want 'oligo_designer_toolsuite.sequence_generator' to be distributed and are
2026-05-19T17:10:04,985           already explicitly excluding 'oligo_designer_toolsuite.sequence_generator' via
2026-05-19T17:10:04,985           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2026-05-19T17:10:04,986           you can try to use `exclude_package_data`, or `include-package-data=False` in
2026-05-19T17:10:04,986           combination with a more fine grained `package-data` configuration.

2026-05-19T17:10:04,987           You can read more about "package data files" on setuptools documentation page:

2026-05-19T17:10:04,988           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2026-05-19T17:10:04,989           [^1]: For Python, any directory (with suitable naming) can be imported,
2026-05-19T17:10:04,990                 even if it does not contain any `.py` files.
2026-05-19T17:10:04,991                 On the other hand, currently there is no concept of package data
2026-05-19T17:10:04,991                 directory, all directories are treated like packages.
2026-05-19T17:10:04,992           ********************************************************************************

2026-05-19T17:10:04,993   !!
2026-05-19T17:10:04,993     check.warn(importable)
2026-05-19T17:10:04,993   /tmp/pip-build-env-pdx72q66/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'oligo_designer_toolsuite.utils' is absent from the `packages` configuration.
2026-05-19T17:10:04,994   !!

2026-05-19T17:10:04,995           ********************************************************************************
2026-05-19T17:10:04,995           ############################
2026-05-19T17:10:04,996           # Package would be ignored #
2026-05-19T17:10:04,996           ############################
2026-05-19T17:10:04,996           Python recognizes 'oligo_designer_toolsuite.utils' as an importable package[^1],
2026-05-19T17:10:04,997           but it is absent from setuptools' `packages` configuration.

2026-05-19T17:10:04,998           This leads to an ambiguous overall configuration. If you want to distribute this
2026-05-19T17:10:04,998           package, please make sure that 'oligo_designer_toolsuite.utils' is explicitly added
2026-05-19T17:10:04,999           to the `packages` configuration field.

2026-05-19T17:10:05,000           Alternatively, you can also rely on setuptools' discovery methods
2026-05-19T17:10:05,000           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2026-05-19T17:10:05,001           instead of `find_packages(...)`/`find:`).

2026-05-19T17:10:05,001           You can read more about "package discovery" on setuptools documentation page:

2026-05-19T17:10:05,002           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2026-05-19T17:10:05,003           If you don't want 'oligo_designer_toolsuite.utils' to be distributed and are
2026-05-19T17:10:05,004           already explicitly excluding 'oligo_designer_toolsuite.utils' via
2026-05-19T17:10:05,004           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2026-05-19T17:10:05,005           you can try to use `exclude_package_data`, or `include-package-data=False` in
2026-05-19T17:10:05,005           combination with a more fine grained `package-data` configuration.

2026-05-19T17:10:05,007           You can read more about "package data files" on setuptools documentation page:

2026-05-19T17:10:05,008           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2026-05-19T17:10:05,010           [^1]: For Python, any directory (with suitable naming) can be imported,
2026-05-19T17:10:05,010                 even if it does not contain any `.py` files.
2026-05-19T17:10:05,011                 On the other hand, currently there is no concept of package data
2026-05-19T17:10:05,011                 directory, all directories are treated like packages.
2026-05-19T17:10:05,012           ********************************************************************************

2026-05-19T17:10:05,013   !!
2026-05-19T17:10:05,014     check.warn(importable)
2026-05-19T17:10:05,014   creating build/lib/oligo_designer_toolsuite/config
2026-05-19T17:10:05,015   copying oligo_designer_toolsuite/config/__init__.py -> build/lib/oligo_designer_toolsuite/config
2026-05-19T17:10:05,015   copying oligo_designer_toolsuite/config/_general_models.py -> build/lib/oligo_designer_toolsuite/config
2026-05-19T17:10:05,016   copying oligo_designer_toolsuite/config/_oligo_scoring.py -> build/lib/oligo_designer_toolsuite/config
2026-05-19T17:10:05,017   copying oligo_designer_toolsuite/config/_property_filters.py -> build/lib/oligo_designer_toolsuite/config
2026-05-19T17:10:05,017   copying oligo_designer_toolsuite/config/_specificity_filters.py -> build/lib/oligo_designer_toolsuite/config
2026-05-19T17:10:05,018   copying oligo_designer_toolsuite/config/_types.py -> build/lib/oligo_designer_toolsuite/config
2026-05-19T17:10:05,018   creating build/lib/oligo_designer_toolsuite/config/overrides
2026-05-19T17:10:05,019   copying oligo_designer_toolsuite/config/overrides/oligo_seq_probe_designer_overrides.py -> build/lib/oligo_designer_toolsuite/config/overrides
2026-05-19T17:10:05,020   creating build/lib/oligo_designer_toolsuite/config/pipelines
2026-05-19T17:10:05,020   copying oligo_designer_toolsuite/config/pipelines/oligo_seq_probe_designer.py -> build/lib/oligo_designer_toolsuite/config/pipelines
2026-05-19T17:10:05,020   creating build/lib/oligo_designer_toolsuite/database
2026-05-19T17:10:05,021   copying oligo_designer_toolsuite/database/__init__.py -> build/lib/oligo_designer_toolsuite/database
2026-05-19T17:10:05,021   copying oligo_designer_toolsuite/database/_oligo_database.py -> build/lib/oligo_designer_toolsuite/database
2026-05-19T17:10:05,022   copying oligo_designer_toolsuite/database/_reference_database.py -> build/lib/oligo_designer_toolsuite/database
2026-05-19T17:10:05,022   creating build/lib/oligo_designer_toolsuite/oligo_efficiency_filter
2026-05-19T17:10:05,023   copying oligo_designer_toolsuite/oligo_efficiency_filter/__init__.py -> build/lib/oligo_designer_toolsuite/oligo_efficiency_filter
2026-05-19T17:10:05,023   copying oligo_designer_toolsuite/oligo_efficiency_filter/_oligo_scoring.py -> build/lib/oligo_designer_toolsuite/oligo_efficiency_filter
2026-05-19T17:10:05,024   copying oligo_designer_toolsuite/oligo_efficiency_filter/_scorer_base.py -> build/lib/oligo_designer_toolsuite/oligo_efficiency_filter
2026-05-19T17:10:05,024   copying oligo_designer_toolsuite/oligo_efficiency_filter/_scorer_region_property.py -> build/lib/oligo_designer_toolsuite/oligo_efficiency_filter
2026-05-19T17:10:05,025   copying oligo_designer_toolsuite/oligo_efficiency_filter/_scorer_sequence_property.py -> build/lib/oligo_designer_toolsuite/oligo_efficiency_filter
2026-05-19T17:10:05,025   copying oligo_designer_toolsuite/oligo_efficiency_filter/_scorer_set_property.py -> build/lib/oligo_designer_toolsuite/oligo_efficiency_filter
2026-05-19T17:10:05,026   copying oligo_designer_toolsuite/oligo_efficiency_filter/_set_scoring.py -> build/lib/oligo_designer_toolsuite/oligo_efficiency_filter
2026-05-19T17:10:05,026   creating build/lib/oligo_designer_toolsuite/oligo_property_calculator
2026-05-19T17:10:05,027   copying oligo_designer_toolsuite/oligo_property_calculator/__init__.py -> build/lib/oligo_designer_toolsuite/oligo_property_calculator
2026-05-19T17:10:05,027   copying oligo_designer_toolsuite/oligo_property_calculator/_property_base.py -> build/lib/oligo_designer_toolsuite/oligo_property_calculator
2026-05-19T17:10:05,028   copying oligo_designer_toolsuite/oligo_property_calculator/_property_calculator.py -> build/lib/oligo_designer_toolsuite/oligo_property_calculator
2026-05-19T17:10:05,029   copying oligo_designer_toolsuite/oligo_property_calculator/_property_functions.py -> build/lib/oligo_designer_toolsuite/oligo_property_calculator
2026-05-19T17:10:05,029   copying oligo_designer_toolsuite/oligo_property_calculator/_property_region.py -> build/lib/oligo_designer_toolsuite/oligo_property_calculator
2026-05-19T17:10:05,030   copying oligo_designer_toolsuite/oligo_property_calculator/_property_sequence.py -> build/lib/oligo_designer_toolsuite/oligo_property_calculator
2026-05-19T17:10:05,030   creating build/lib/oligo_designer_toolsuite/oligo_property_filter
2026-05-19T17:10:05,031   copying oligo_designer_toolsuite/oligo_property_filter/__init__.py -> build/lib/oligo_designer_toolsuite/oligo_property_filter
2026-05-19T17:10:05,031   copying oligo_designer_toolsuite/oligo_property_filter/_filter_base.py -> build/lib/oligo_designer_toolsuite/oligo_property_filter
2026-05-19T17:10:05,032   copying oligo_designer_toolsuite/oligo_property_filter/_filter_experiment_specific.py -> build/lib/oligo_designer_toolsuite/oligo_property_filter
2026-05-19T17:10:05,032   copying oligo_designer_toolsuite/oligo_property_filter/_filter_experiment_unspecific.py -> build/lib/oligo_designer_toolsuite/oligo_property_filter
2026-05-19T17:10:05,033   copying oligo_designer_toolsuite/oligo_property_filter/_property_filter.py -> build/lib/oligo_designer_toolsuite/oligo_property_filter
2026-05-19T17:10:05,034   creating build/lib/oligo_designer_toolsuite/oligo_selection
2026-05-19T17:10:05,034   copying oligo_designer_toolsuite/oligo_selection/__init__.py -> build/lib/oligo_designer_toolsuite/oligo_selection
2026-05-19T17:10:05,034   copying oligo_designer_toolsuite/oligo_selection/_oligo_selection_base.py -> build/lib/oligo_designer_toolsuite/oligo_selection
2026-05-19T17:10:05,035   copying oligo_designer_toolsuite/oligo_selection/_oligo_selection_homogeneous_properties.py -> build/lib/oligo_designer_toolsuite/oligo_selection
2026-05-19T17:10:05,035   copying oligo_designer_toolsuite/oligo_selection/_oligo_selection_independent_sets.py -> build/lib/oligo_designer_toolsuite/oligo_selection
2026-05-19T17:10:05,035   creating build/lib/oligo_designer_toolsuite/oligo_specificity_filter
2026-05-19T17:10:05,036   copying oligo_designer_toolsuite/oligo_specificity_filter/__init__.py -> build/lib/oligo_designer_toolsuite/oligo_specificity_filter
2026-05-19T17:10:05,036   copying oligo_designer_toolsuite/oligo_specificity_filter/_filter_base.py -> build/lib/oligo_designer_toolsuite/oligo_specificity_filter
2026-05-19T17:10:05,037   copying oligo_designer_toolsuite/oligo_specificity_filter/_filter_blastn.py -> build/lib/oligo_designer_toolsuite/oligo_specificity_filter
2026-05-19T17:10:05,037   copying oligo_designer_toolsuite/oligo_specificity_filter/_filter_bowtie.py -> build/lib/oligo_designer_toolsuite/oligo_specificity_filter
2026-05-19T17:10:05,037   copying oligo_designer_toolsuite/oligo_specificity_filter/_filter_cross_hybridization.py -> build/lib/oligo_designer_toolsuite/oligo_specificity_filter
2026-05-19T17:10:05,038   copying oligo_designer_toolsuite/oligo_specificity_filter/_filter_exact_matches.py -> build/lib/oligo_designer_toolsuite/oligo_specificity_filter
2026-05-19T17:10:05,038   copying oligo_designer_toolsuite/oligo_specificity_filter/_filter_hybridization_probability.py -> build/lib/oligo_designer_toolsuite/oligo_specificity_filter
2026-05-19T17:10:05,039   copying oligo_designer_toolsuite/oligo_specificity_filter/_filter_variants.py -> build/lib/oligo_designer_toolsuite/oligo_specificity_filter
2026-05-19T17:10:05,039   copying oligo_designer_toolsuite/oligo_specificity_filter/_policies.py -> build/lib/oligo_designer_toolsuite/oligo_specificity_filter
2026-05-19T17:10:05,040   copying oligo_designer_toolsuite/oligo_specificity_filter/_specificity_filter.py -> build/lib/oligo_designer_toolsuite/oligo_specificity_filter
2026-05-19T17:10:05,040   creating build/lib/oligo_designer_toolsuite/pipelines
2026-05-19T17:10:05,041   copying oligo_designer_toolsuite/pipelines/__init__.py -> build/lib/oligo_designer_toolsuite/pipelines
2026-05-19T17:10:05,042   copying oligo_designer_toolsuite/pipelines/_cycle_hcr_probe_designer.py -> build/lib/oligo_designer_toolsuite/pipelines
2026-05-19T17:10:05,042   copying oligo_designer_toolsuite/pipelines/_genomic_region_generator.py -> build/lib/oligo_designer_toolsuite/pipelines
2026-05-19T17:10:05,043   copying oligo_designer_toolsuite/pipelines/_hcr_probe_designer.py -> build/lib/oligo_designer_toolsuite/pipelines
2026-05-19T17:10:05,043   copying oligo_designer_toolsuite/pipelines/_merfish_probe_designer.py -> build/lib/oligo_designer_toolsuite/pipelines
2026-05-19T17:10:05,044   copying oligo_designer_toolsuite/pipelines/_oligo_seq_probe_designer.py -> build/lib/oligo_designer_toolsuite/pipelines
2026-05-19T17:10:05,044   copying oligo_designer_toolsuite/pipelines/_scrinshot_probe_designer.py -> build/lib/oligo_designer_toolsuite/pipelines
2026-05-19T17:10:05,045   copying oligo_designer_toolsuite/pipelines/_seqfish_plus_probe_designer.py -> build/lib/oligo_designer_toolsuite/pipelines
2026-05-19T17:10:05,045   copying oligo_designer_toolsuite/pipelines/_utils.py -> build/lib/oligo_designer_toolsuite/pipelines
2026-05-19T17:10:05,046   creating build/lib/oligo_designer_toolsuite/sequence_generator
2026-05-19T17:10:05,046   copying oligo_designer_toolsuite/sequence_generator/__init__.py -> build/lib/oligo_designer_toolsuite/sequence_generator
2026-05-19T17:10:05,047   copying oligo_designer_toolsuite/sequence_generator/_ftp_loader.py -> build/lib/oligo_designer_toolsuite/sequence_generator
2026-05-19T17:10:05,048   copying oligo_designer_toolsuite/sequence_generator/_genomic_region_generator.py -> build/lib/oligo_designer_toolsuite/sequence_generator
2026-05-19T17:10:05,048   copying oligo_designer_toolsuite/sequence_generator/_oligo_sequence_generator.py -> build/lib/oligo_designer_toolsuite/sequence_generator
2026-05-19T17:10:05,048   creating build/lib/oligo_designer_toolsuite/utils
2026-05-19T17:10:05,049   copying oligo_designer_toolsuite/utils/__init__.py -> build/lib/oligo_designer_toolsuite/utils
2026-05-19T17:10:05,049   copying oligo_designer_toolsuite/utils/_checkers_and_helpers.py -> build/lib/oligo_designer_toolsuite/utils
2026-05-19T17:10:05,049   copying oligo_designer_toolsuite/utils/_database_processor.py -> build/lib/oligo_designer_toolsuite/utils
2026-05-19T17:10:05,050   copying oligo_designer_toolsuite/utils/_sequence_parser.py -> build/lib/oligo_designer_toolsuite/utils
2026-05-19T17:10:05,050   copying oligo_designer_toolsuite/utils/_sequence_processor.py -> build/lib/oligo_designer_toolsuite/utils
2026-05-19T17:10:05,051   installing to build/bdist.linux-armv7l/wheel
2026-05-19T17:10:05,051   running install
2026-05-19T17:10:05,054   running install_lib
2026-05-19T17:10:05,061   creating build/bdist.linux-armv7l/wheel
2026-05-19T17:10:05,063   creating build/bdist.linux-armv7l/wheel/oligo_designer_toolsuite
2026-05-19T17:10:05,064   copying build/lib/oligo_designer_toolsuite/_version.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite
2026-05-19T17:10:05,066   creating build/bdist.linux-armv7l/wheel/oligo_designer_toolsuite/oligo_selection
2026-05-19T17:10:05,067   copying build/lib/oligo_designer_toolsuite/oligo_selection/_oligo_selection_independent_sets.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_selection
2026-05-19T17:10:05,070   copying build/lib/oligo_designer_toolsuite/oligo_selection/_oligo_selection_homogeneous_properties.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_selection
2026-05-19T17:10:05,072   copying build/lib/oligo_designer_toolsuite/oligo_selection/__init__.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_selection
2026-05-19T17:10:05,073   copying build/lib/oligo_designer_toolsuite/oligo_selection/_oligo_selection_base.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_selection
2026-05-19T17:10:05,076   creating build/bdist.linux-armv7l/wheel/oligo_designer_toolsuite/database
2026-05-19T17:10:05,077   copying build/lib/oligo_designer_toolsuite/database/_oligo_database.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/database
2026-05-19T17:10:05,080   copying build/lib/oligo_designer_toolsuite/database/_reference_database.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/database
2026-05-19T17:10:05,082   copying build/lib/oligo_designer_toolsuite/database/__init__.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/database
2026-05-19T17:10:05,085   creating build/bdist.linux-armv7l/wheel/oligo_designer_toolsuite/utils
2026-05-19T17:10:05,086   copying build/lib/oligo_designer_toolsuite/utils/_database_processor.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/utils
2026-05-19T17:10:05,088   copying build/lib/oligo_designer_toolsuite/utils/_sequence_processor.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/utils
2026-05-19T17:10:05,091   copying build/lib/oligo_designer_toolsuite/utils/__init__.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/utils
2026-05-19T17:10:05,093   copying build/lib/oligo_designer_toolsuite/utils/_sequence_parser.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/utils
2026-05-19T17:10:05,096   copying build/lib/oligo_designer_toolsuite/utils/_checkers_and_helpers.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/utils
2026-05-19T17:10:05,098   creating build/bdist.linux-armv7l/wheel/oligo_designer_toolsuite/sequence_generator
2026-05-19T17:10:05,100   copying build/lib/oligo_designer_toolsuite/sequence_generator/_oligo_sequence_generator.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/sequence_generator
2026-05-19T17:10:05,102   copying build/lib/oligo_designer_toolsuite/sequence_generator/_genomic_region_generator.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/sequence_generator
2026-05-19T17:10:05,106   copying build/lib/oligo_designer_toolsuite/sequence_generator/_ftp_loader.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/sequence_generator
2026-05-19T17:10:05,108   copying build/lib/oligo_designer_toolsuite/sequence_generator/__init__.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/sequence_generator
2026-05-19T17:10:05,110   copying build/lib/oligo_designer_toolsuite/_constants.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite
2026-05-19T17:10:05,112   creating build/bdist.linux-armv7l/wheel/oligo_designer_toolsuite/pipelines
2026-05-19T17:10:05,113   copying build/lib/oligo_designer_toolsuite/pipelines/_seqfish_plus_probe_designer.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/pipelines
2026-05-19T17:10:05,117   copying build/lib/oligo_designer_toolsuite/pipelines/_hcr_probe_designer.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/pipelines
2026-05-19T17:10:05,120   copying build/lib/oligo_designer_toolsuite/pipelines/_merfish_probe_designer.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/pipelines
2026-05-19T17:10:05,125   copying build/lib/oligo_designer_toolsuite/pipelines/_scrinshot_probe_designer.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/pipelines
2026-05-19T17:10:05,129   copying build/lib/oligo_designer_toolsuite/pipelines/_oligo_seq_probe_designer.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/pipelines
2026-05-19T17:10:05,131   copying build/lib/oligo_designer_toolsuite/pipelines/_genomic_region_generator.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/pipelines
2026-05-19T17:10:05,134   copying build/lib/oligo_designer_toolsuite/pipelines/__init__.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/pipelines
2026-05-19T17:10:05,135   copying build/lib/oligo_designer_toolsuite/pipelines/_cycle_hcr_probe_designer.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/pipelines
2026-05-19T17:10:05,139   copying build/lib/oligo_designer_toolsuite/pipelines/_utils.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/pipelines
2026-05-19T17:10:05,142   creating build/bdist.linux-armv7l/wheel/oligo_designer_toolsuite/oligo_specificity_filter
2026-05-19T17:10:05,143   copying build/lib/oligo_designer_toolsuite/oligo_specificity_filter/_filter_exact_matches.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_specificity_filter
2026-05-19T17:10:05,145   copying build/lib/oligo_designer_toolsuite/oligo_specificity_filter/_filter_blastn.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_specificity_filter
2026-05-19T17:10:05,148   copying build/lib/oligo_designer_toolsuite/oligo_specificity_filter/_filter_hybridization_probability.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_specificity_filter
2026-05-19T17:10:05,150   copying build/lib/oligo_designer_toolsuite/oligo_specificity_filter/_filter_variants.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_specificity_filter
2026-05-19T17:10:05,153   copying build/lib/oligo_designer_toolsuite/oligo_specificity_filter/__init__.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_specificity_filter
2026-05-19T17:10:05,154   copying build/lib/oligo_designer_toolsuite/oligo_specificity_filter/_filter_base.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_specificity_filter
2026-05-19T17:10:05,157   copying build/lib/oligo_designer_toolsuite/oligo_specificity_filter/_filter_bowtie.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_specificity_filter
2026-05-19T17:10:05,160   copying build/lib/oligo_designer_toolsuite/oligo_specificity_filter/_filter_cross_hybridization.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_specificity_filter
2026-05-19T17:10:05,162   copying build/lib/oligo_designer_toolsuite/oligo_specificity_filter/_policies.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_specificity_filter
2026-05-19T17:10:05,164   copying build/lib/oligo_designer_toolsuite/oligo_specificity_filter/_specificity_filter.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_specificity_filter
2026-05-19T17:10:05,166   copying build/lib/oligo_designer_toolsuite/__init__.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite
2026-05-19T17:10:05,168   creating build/bdist.linux-armv7l/wheel/oligo_designer_toolsuite/config
2026-05-19T17:10:05,169   copying build/lib/oligo_designer_toolsuite/config/_property_filters.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/config
2026-05-19T17:10:05,171   creating build/bdist.linux-armv7l/wheel/oligo_designer_toolsuite/config/overrides
2026-05-19T17:10:05,172   copying build/lib/oligo_designer_toolsuite/config/overrides/oligo_seq_probe_designer_overrides.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/config/overrides
2026-05-19T17:10:05,174   copying build/lib/oligo_designer_toolsuite/config/_specificity_filters.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/config
2026-05-19T17:10:05,176   creating build/bdist.linux-armv7l/wheel/oligo_designer_toolsuite/config/pipelines
2026-05-19T17:10:05,177   copying build/lib/oligo_designer_toolsuite/config/pipelines/oligo_seq_probe_designer.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/config/pipelines
2026-05-19T17:10:05,180   copying build/lib/oligo_designer_toolsuite/config/_general_models.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/config
2026-05-19T17:10:05,183   copying build/lib/oligo_designer_toolsuite/config/_types.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/config
2026-05-19T17:10:05,184   copying build/lib/oligo_designer_toolsuite/config/_oligo_scoring.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/config
2026-05-19T17:10:05,186   copying build/lib/oligo_designer_toolsuite/config/__init__.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/config
2026-05-19T17:10:05,189   creating build/bdist.linux-armv7l/wheel/oligo_designer_toolsuite/oligo_efficiency_filter
2026-05-19T17:10:05,190   copying build/lib/oligo_designer_toolsuite/oligo_efficiency_filter/_scorer_base.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_efficiency_filter
2026-05-19T17:10:05,191   copying build/lib/oligo_designer_toolsuite/oligo_efficiency_filter/_set_scoring.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_efficiency_filter
2026-05-19T17:10:05,194   copying build/lib/oligo_designer_toolsuite/oligo_efficiency_filter/_scorer_set_property.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_efficiency_filter
2026-05-19T17:10:05,196   copying build/lib/oligo_designer_toolsuite/oligo_efficiency_filter/_scorer_sequence_property.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_efficiency_filter
2026-05-19T17:10:05,198   copying build/lib/oligo_designer_toolsuite/oligo_efficiency_filter/_scorer_region_property.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_efficiency_filter
2026-05-19T17:10:05,200   copying build/lib/oligo_designer_toolsuite/oligo_efficiency_filter/_oligo_scoring.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_efficiency_filter
2026-05-19T17:10:05,202   copying build/lib/oligo_designer_toolsuite/oligo_efficiency_filter/__init__.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_efficiency_filter
2026-05-19T17:10:05,204   creating build/bdist.linux-armv7l/wheel/oligo_designer_toolsuite/oligo_property_filter
2026-05-19T17:10:05,205   copying build/lib/oligo_designer_toolsuite/oligo_property_filter/_filter_experiment_specific.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_property_filter
2026-05-19T17:10:05,208   copying build/lib/oligo_designer_toolsuite/oligo_property_filter/__init__.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_property_filter
2026-05-19T17:10:05,209   copying build/lib/oligo_designer_toolsuite/oligo_property_filter/_filter_base.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_property_filter
2026-05-19T17:10:05,211   copying build/lib/oligo_designer_toolsuite/oligo_property_filter/_property_filter.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_property_filter
2026-05-19T17:10:05,213   copying build/lib/oligo_designer_toolsuite/oligo_property_filter/_filter_experiment_unspecific.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_property_filter
2026-05-19T17:10:05,216   creating build/bdist.linux-armv7l/wheel/oligo_designer_toolsuite/oligo_property_calculator
2026-05-19T17:10:05,217   copying build/lib/oligo_designer_toolsuite/oligo_property_calculator/_property_functions.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_property_calculator
2026-05-19T17:10:05,219   copying build/lib/oligo_designer_toolsuite/oligo_property_calculator/_property_region.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_property_calculator
2026-05-19T17:10:05,221   copying build/lib/oligo_designer_toolsuite/oligo_property_calculator/_property_base.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_property_calculator
2026-05-19T17:10:05,224   copying build/lib/oligo_designer_toolsuite/oligo_property_calculator/_property_sequence.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_property_calculator
2026-05-19T17:10:05,226   copying build/lib/oligo_designer_toolsuite/oligo_property_calculator/__init__.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_property_calculator
2026-05-19T17:10:05,228   copying build/lib/oligo_designer_toolsuite/oligo_property_calculator/_property_calculator.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite/oligo_property_calculator
2026-05-19T17:10:05,230   copying build/lib/oligo_designer_toolsuite/_exceptions.py -> build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite
2026-05-19T17:10:05,232   running install_egg_info
2026-05-19T17:10:05,238   Copying oligo_designer_toolsuite.egg-info to build/bdist.linux-armv7l/wheel/./oligo_designer_toolsuite-2.1.0-py3.11.egg-info
2026-05-19T17:10:05,250   running install_scripts
2026-05-19T17:10:05,262   creating build/bdist.linux-armv7l/wheel/oligo_designer_toolsuite-2.1.0.dist-info/WHEEL
2026-05-19T17:10:05,264   creating '/tmp/pip-wheel-_ixonsny/.tmp-kf_x13io/oligo_designer_toolsuite-2.1.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2026-05-19T17:10:05,267   adding 'oligo_designer_toolsuite/__init__.py'
2026-05-19T17:10:05,268   adding 'oligo_designer_toolsuite/_constants.py'
2026-05-19T17:10:05,269   adding 'oligo_designer_toolsuite/_exceptions.py'
2026-05-19T17:10:05,271   adding 'oligo_designer_toolsuite/_version.py'
2026-05-19T17:10:05,273   adding 'oligo_designer_toolsuite/config/__init__.py'
2026-05-19T17:10:05,275   adding 'oligo_designer_toolsuite/config/_general_models.py'
2026-05-19T17:10:05,277   adding 'oligo_designer_toolsuite/config/_oligo_scoring.py'
2026-05-19T17:10:05,279   adding 'oligo_designer_toolsuite/config/_property_filters.py'
2026-05-19T17:10:05,280   adding 'oligo_designer_toolsuite/config/_specificity_filters.py'
2026-05-19T17:10:05,282   adding 'oligo_designer_toolsuite/config/_types.py'
2026-05-19T17:10:05,284   adding 'oligo_designer_toolsuite/config/overrides/oligo_seq_probe_designer_overrides.py'
2026-05-19T17:10:05,286   adding 'oligo_designer_toolsuite/config/pipelines/oligo_seq_probe_designer.py'
2026-05-19T17:10:05,287   adding 'oligo_designer_toolsuite/database/__init__.py'
2026-05-19T17:10:05,293   adding 'oligo_designer_toolsuite/database/_oligo_database.py'
2026-05-19T17:10:05,296   adding 'oligo_designer_toolsuite/database/_reference_database.py'
2026-05-19T17:10:05,297   adding 'oligo_designer_toolsuite/oligo_efficiency_filter/__init__.py'
2026-05-19T17:10:05,298   adding 'oligo_designer_toolsuite/oligo_efficiency_filter/_oligo_scoring.py'
2026-05-19T17:10:05,300   adding 'oligo_designer_toolsuite/oligo_efficiency_filter/_scorer_base.py'
2026-05-19T17:10:05,301   adding 'oligo_designer_toolsuite/oligo_efficiency_filter/_scorer_region_property.py'
2026-05-19T17:10:05,303   adding 'oligo_designer_toolsuite/oligo_efficiency_filter/_scorer_sequence_property.py'
2026-05-19T17:10:05,304   adding 'oligo_designer_toolsuite/oligo_efficiency_filter/_scorer_set_property.py'
2026-05-19T17:10:05,306   adding 'oligo_designer_toolsuite/oligo_efficiency_filter/_set_scoring.py'
2026-05-19T17:10:05,308   adding 'oligo_designer_toolsuite/oligo_property_calculator/__init__.py'
2026-05-19T17:10:05,309   adding 'oligo_designer_toolsuite/oligo_property_calculator/_property_base.py'
2026-05-19T17:10:05,310   adding 'oligo_designer_toolsuite/oligo_property_calculator/_property_calculator.py'
2026-05-19T17:10:05,313   adding 'oligo_designer_toolsuite/oligo_property_calculator/_property_functions.py'
2026-05-19T17:10:05,314   adding 'oligo_designer_toolsuite/oligo_property_calculator/_property_region.py'
2026-05-19T17:10:05,317   adding 'oligo_designer_toolsuite/oligo_property_calculator/_property_sequence.py'
2026-05-19T17:10:05,319   adding 'oligo_designer_toolsuite/oligo_property_filter/__init__.py'
2026-05-19T17:10:05,320   adding 'oligo_designer_toolsuite/oligo_property_filter/_filter_base.py'
2026-05-19T17:10:05,321   adding 'oligo_designer_toolsuite/oligo_property_filter/_filter_experiment_specific.py'
2026-05-19T17:10:05,324   adding 'oligo_designer_toolsuite/oligo_property_filter/_filter_experiment_unspecific.py'
2026-05-19T17:10:05,325   adding 'oligo_designer_toolsuite/oligo_property_filter/_property_filter.py'
2026-05-19T17:10:05,327   adding 'oligo_designer_toolsuite/oligo_selection/__init__.py'
2026-05-19T17:10:05,329   adding 'oligo_designer_toolsuite/oligo_selection/_oligo_selection_base.py'
2026-05-19T17:10:05,330   adding 'oligo_designer_toolsuite/oligo_selection/_oligo_selection_homogeneous_properties.py'
2026-05-19T17:10:05,333   adding 'oligo_designer_toolsuite/oligo_selection/_oligo_selection_independent_sets.py'
2026-05-19T17:10:05,335   adding 'oligo_designer_toolsuite/oligo_specificity_filter/__init__.py'
2026-05-19T17:10:05,338   adding 'oligo_designer_toolsuite/oligo_specificity_filter/_filter_base.py'
2026-05-19T17:10:05,341   adding 'oligo_designer_toolsuite/oligo_specificity_filter/_filter_blastn.py'
2026-05-19T17:10:05,344   adding 'oligo_designer_toolsuite/oligo_specificity_filter/_filter_bowtie.py'
2026-05-19T17:10:05,346   adding 'oligo_designer_toolsuite/oligo_specificity_filter/_filter_cross_hybridization.py'
2026-05-19T17:10:05,348   adding 'oligo_designer_toolsuite/oligo_specificity_filter/_filter_exact_matches.py'
2026-05-19T17:10:05,349   adding 'oligo_designer_toolsuite/oligo_specificity_filter/_filter_hybridization_probability.py'
2026-05-19T17:10:05,351   adding 'oligo_designer_toolsuite/oligo_specificity_filter/_filter_variants.py'
2026-05-19T17:10:05,353   adding 'oligo_designer_toolsuite/oligo_specificity_filter/_policies.py'
2026-05-19T17:10:05,354   adding 'oligo_designer_toolsuite/oligo_specificity_filter/_specificity_filter.py'
2026-05-19T17:10:05,356   adding 'oligo_designer_toolsuite/pipelines/__init__.py'
2026-05-19T17:10:05,367   adding 'oligo_designer_toolsuite/pipelines/_cycle_hcr_probe_designer.py'
2026-05-19T17:10:05,370   adding 'oligo_designer_toolsuite/pipelines/_genomic_region_generator.py'
2026-05-19T17:10:05,373   adding 'oligo_designer_toolsuite/pipelines/_hcr_probe_designer.py'
2026-05-19T17:10:05,387   adding 'oligo_designer_toolsuite/pipelines/_merfish_probe_designer.py'
2026-05-19T17:10:05,394   adding 'oligo_designer_toolsuite/pipelines/_oligo_seq_probe_designer.py'
2026-05-19T17:10:05,405   adding 'oligo_designer_toolsuite/pipelines/_scrinshot_probe_designer.py'
2026-05-19T17:10:05,418   adding 'oligo_designer_toolsuite/pipelines/_seqfish_plus_probe_designer.py'
2026-05-19T17:10:05,421   adding 'oligo_designer_toolsuite/pipelines/_utils.py'
2026-05-19T17:10:05,422   adding 'oligo_designer_toolsuite/sequence_generator/__init__.py'
2026-05-19T17:10:05,426   adding 'oligo_designer_toolsuite/sequence_generator/_ftp_loader.py'
2026-05-19T17:10:05,431   adding 'oligo_designer_toolsuite/sequence_generator/_genomic_region_generator.py'
2026-05-19T17:10:05,434   adding 'oligo_designer_toolsuite/sequence_generator/_oligo_sequence_generator.py'
2026-05-19T17:10:05,436   adding 'oligo_designer_toolsuite/utils/__init__.py'
2026-05-19T17:10:05,437   adding 'oligo_designer_toolsuite/utils/_checkers_and_helpers.py'
2026-05-19T17:10:05,439   adding 'oligo_designer_toolsuite/utils/_database_processor.py'
2026-05-19T17:10:05,442   adding 'oligo_designer_toolsuite/utils/_sequence_parser.py'
2026-05-19T17:10:05,444   adding 'oligo_designer_toolsuite/utils/_sequence_processor.py'
2026-05-19T17:10:05,447   adding 'oligo_designer_toolsuite-2.1.0.dist-info/licenses/LICENSE'
2026-05-19T17:10:05,448   adding 'oligo_designer_toolsuite-2.1.0.dist-info/METADATA'
2026-05-19T17:10:05,450   adding 'oligo_designer_toolsuite-2.1.0.dist-info/WHEEL'
2026-05-19T17:10:05,450   adding 'oligo_designer_toolsuite-2.1.0.dist-info/entry_points.txt'
2026-05-19T17:10:05,451   adding 'oligo_designer_toolsuite-2.1.0.dist-info/top_level.txt'
2026-05-19T17:10:05,453   adding 'oligo_designer_toolsuite-2.1.0.dist-info/RECORD'
2026-05-19T17:10:05,457   removing build/bdist.linux-armv7l/wheel
2026-05-19T17:10:05,583   Building wheel for oligo-designer-toolsuite (pyproject.toml): finished with status 'done'
2026-05-19T17:10:05,595   Created wheel for oligo-designer-toolsuite: filename=oligo_designer_toolsuite-2.1.0-py3-none-any.whl size=268693 sha256=0ce23cbdeff3ecffa88babbf5127e4e60df8dc2cfd46b7cb2dadee432bf40ef5
2026-05-19T17:10:05,596   Stored in directory: /tmp/pip-ephem-wheel-cache-p25e40mh/wheels/68/c4/38/4e5ef9aa1a149c5f9477b9a645783877e52e83a209e2ab4a2e
2026-05-19T17:10:05,611 Successfully built oligo-designer-toolsuite
2026-05-19T17:10:05,624 Removed build tracker: '/tmp/pip-build-tracker-1cki1shz'