2026-05-20T09:56:10,736 Created temporary directory: /tmp/pip-ephem-wheel-cache-k_l6qhp4 2026-05-20T09:56:10,738 Created temporary directory: /tmp/pip-build-tracker-g50op57x 2026-05-20T09:56:10,739 Initialized build tracking at /tmp/pip-build-tracker-g50op57x 2026-05-20T09:56:10,739 Created build tracker: /tmp/pip-build-tracker-g50op57x 2026-05-20T09:56:10,739 Entered build tracker: /tmp/pip-build-tracker-g50op57x 2026-05-20T09:56:10,740 Created temporary directory: /tmp/pip-wheel-53tlrwhs 2026-05-20T09:56:10,743 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-05-20T09:56:10,746 Created temporary directory: /tmp/pip-ephem-wheel-cache-wvo5dypa 2026-05-20T09:56:10,768 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-05-20T09:56:10,772 2 location(s) to search for versions of bionify: 2026-05-20T09:56:10,772 * https://pypi.org/simple/bionify/ 2026-05-20T09:56:10,772 * https://www.piwheels.org/simple/bionify/ 2026-05-20T09:56:10,773 Fetching project page and analyzing links: https://pypi.org/simple/bionify/ 2026-05-20T09:56:10,774 Getting page https://pypi.org/simple/bionify/ 2026-05-20T09:56:10,775 Found index url https://pypi.org/simple 2026-05-20T09:56:10,932 Fetched page https://pypi.org/simple/bionify/ as application/vnd.pypi.simple.v1+json 2026-05-20T09:56:10,934 Skipping link: No binaries permitted for bionify: https://files.pythonhosted.org/packages/2d/6b/cb8db03200cc6b06c13f61c4970b4336be817c23faf3c286c7eed67201b2/bionify-0.1.0-cp313-cp313-win_amd64.whl (from https://pypi.org/simple/bionify/) (requires-python:>=3.9) 2026-05-20T09:56:10,935 Found link https://files.pythonhosted.org/packages/ca/50/87a4306da30781a5c3bc59624810b6f06f3c358f3c53f00c13168aa1fb63/bionify-0.1.0.tar.gz (from https://pypi.org/simple/bionify/) (requires-python:>=3.9), version: 0.1.0 2026-05-20T09:56:10,936 Skipping link: No binaries permitted for bionify: https://files.pythonhosted.org/packages/e6/ab/6703ddb340e12c9bcf58b4e8c95c8e909bb993e81a0719e5d9136868fe09/bionify-0.1.1-cp313-cp313-win_amd64.whl (from https://pypi.org/simple/bionify/) (requires-python:>=3.9) 2026-05-20T09:56:10,937 Found link https://files.pythonhosted.org/packages/98/c8/35e5d007b86f3c407d883510b3a2659597c8be555cdca9af1d2ec6262aea/bionify-0.1.1.tar.gz (from https://pypi.org/simple/bionify/) (requires-python:>=3.9), version: 0.1.1 2026-05-20T09:56:10,938 Skipping link: No binaries permitted for bionify: https://files.pythonhosted.org/packages/41/f5/4dd1edb49e49e667ff82b1148e5b00773f9a86a04ad3921aeb233eb8aeb6/bionify-0.1.2-cp313-cp313-win_amd64.whl (from https://pypi.org/simple/bionify/) (requires-python:>=3.9) 2026-05-20T09:56:10,939 Found link https://files.pythonhosted.org/packages/83/61/8e3edc8f9cb2380fc02432a0dbcc56c6bf12f2aecd5fe029237148185ca9/bionify-0.1.2.tar.gz (from https://pypi.org/simple/bionify/) (requires-python:>=3.9), version: 0.1.2 2026-05-20T09:56:10,940 Skipping link: No binaries permitted for bionify: https://files.pythonhosted.org/packages/c4/a7/84532b99f1cbb5b1c36eb464133c88d83605d1e85e5fc98f8f184631af44/bionify-0.1.3-cp313-cp313-win_amd64.whl (from https://pypi.org/simple/bionify/) (requires-python:>=3.9) 2026-05-20T09:56:10,941 Found link https://files.pythonhosted.org/packages/27/8c/eef68408567deea13a0dcd794817eee6456ab09990204d8de163c4be6343/bionify-0.1.3.tar.gz (from https://pypi.org/simple/bionify/) (requires-python:>=3.9), version: 0.1.3 2026-05-20T09:56:10,942 Fetching project page and analyzing links: https://www.piwheels.org/simple/bionify/ 2026-05-20T09:56:10,942 Getting page https://www.piwheels.org/simple/bionify/ 2026-05-20T09:56:10,944 Found index url https://www.piwheels.org/simple 2026-05-20T09:56:15,630 Fetched page https://www.piwheels.org/simple/bionify/ as text/html 2026-05-20T09:56:15,637 Skipping link: No binaries permitted for bionify: https://www.piwheels.org/simple/bionify/bionify-0.1.2-cp311-cp311-linux_armv6l.whl#sha256=85c339733acfc2e4f197342f1c8580b5e8150c471c01f5fb042769f507bf002e (from https://www.piwheels.org/simple/bionify/) (requires-python:>=3.9) 2026-05-20T09:56:15,638 Skipping link: No binaries permitted for bionify: https://www.piwheels.org/simple/bionify/bionify-0.1.2-cp311-cp311-linux_armv7l.whl#sha256=85c339733acfc2e4f197342f1c8580b5e8150c471c01f5fb042769f507bf002e (from https://www.piwheels.org/simple/bionify/) (requires-python:>=3.9) 2026-05-20T09:56:15,639 Skipping link: No binaries permitted for bionify: https://www.piwheels.org/simple/bionify/bionify-0.1.1-cp311-cp311-linux_armv6l.whl#sha256=34b9a3c19a7cddb5fe6f00048619d57a8ef575fde30e30bc0f956382e9b4ad04 (from https://www.piwheels.org/simple/bionify/) (requires-python:>=3.9) 2026-05-20T09:56:15,640 Skipping link: No binaries permitted for bionify: https://www.piwheels.org/simple/bionify/bionify-0.1.1-cp311-cp311-linux_armv7l.whl#sha256=34b9a3c19a7cddb5fe6f00048619d57a8ef575fde30e30bc0f956382e9b4ad04 (from https://www.piwheels.org/simple/bionify/) (requires-python:>=3.9) 2026-05-20T09:56:15,641 Skipping link: No binaries permitted for bionify: https://www.piwheels.org/simple/bionify/bionify-0.1.0-cp311-cp311-linux_armv6l.whl#sha256=ab26b8725ab9f37fd036fd0d69d78a74dd170b611b1f12bc9b9f0f90a776631c (from https://www.piwheels.org/simple/bionify/) (requires-python:>=3.9) 2026-05-20T09:56:15,642 Skipping link: No binaries permitted for bionify: https://www.piwheels.org/simple/bionify/bionify-0.1.0-cp311-cp311-linux_armv7l.whl#sha256=ab26b8725ab9f37fd036fd0d69d78a74dd170b611b1f12bc9b9f0f90a776631c (from https://www.piwheels.org/simple/bionify/) (requires-python:>=3.9) 2026-05-20T09:56:15,643 Skipping link: not a file: https://www.piwheels.org/simple/bionify/ 2026-05-20T09:56:15,644 Skipping link: not a file: https://pypi.org/simple/bionify/ 2026-05-20T09:56:15,678 Given no hashes to check 1 links for project 'bionify': discarding no candidates 2026-05-20T09:56:15,698 Collecting bionify==0.1.3 2026-05-20T09:56:15,700 Created temporary directory: /tmp/pip-unpack-uz_v2mvo 2026-05-20T09:56:15,929 Downloading bionify-0.1.3.tar.gz (104 kB) 2026-05-20T09:56:16,039 Added bionify==0.1.3 from https://files.pythonhosted.org/packages/27/8c/eef68408567deea13a0dcd794817eee6456ab09990204d8de163c4be6343/bionify-0.1.3.tar.gz to build tracker '/tmp/pip-build-tracker-g50op57x' 2026-05-20T09:56:16,045 Created temporary directory: /tmp/pip-build-env-6qy7c67d 2026-05-20T09:56:16,049 Installing build dependencies: started 2026-05-20T09:56:16,050 Running command pip subprocess to install build dependencies 2026-05-20T09:56:17,255 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-05-20T09:56:17,681 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-05-20T09:56:17,706 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-05-20T09:56:23,224 Collecting scikit-build-core>=0.10 2026-05-20T09:56:23,226 Obtaining dependency information for scikit-build-core>=0.10 from https://www.piwheels.org/simple/scikit-build-core/scikit_build_core-0.12.2-py3-none-any.whl.metadata 2026-05-20T09:56:23,244 Using cached https://www.piwheels.org/simple/scikit-build-core/scikit_build_core-0.12.2-py3-none-any.whl.metadata (16 kB) 2026-05-20T09:56:23,257 Discarding https://www.piwheels.org/simple/scikit-build-core/scikit_build_core-0.12.2-py3-none-any.whl#sha256=46d8a176f3b4d26308916fc087f8ea1b9f39070d59462a7376bad7f008e71a18 (from https://www.piwheels.org/simple/scikit-build-core/) (requires-python:>=3.8): Requested scikit-build-core>=0.10 from https://www.piwheels.org/simple/scikit-build-core/scikit_build_core-0.12.2-py3-none-any.whl#sha256=46d8a176f3b4d26308916fc087f8ea1b9f39070d59462a7376bad7f008e71a18 has inconsistent Name: expected 'scikit-build-core', but metadata has 'scikit_build_core' 2026-05-20T09:56:23,283 Using cached scikit_build_core-0.12.2-py3-none-any.whl (192 kB) 2026-05-20T09:56:23,404 Collecting nanobind>=1.9.2 2026-05-20T09:56:23,406 Obtaining dependency information for nanobind>=1.9.2 from https://www.piwheels.org/simple/nanobind/nanobind-2.12.0-py3-none-any.whl.metadata 2026-05-20T09:56:23,426 Using cached https://www.piwheels.org/simple/nanobind/nanobind-2.12.0-py3-none-any.whl.metadata (1.8 kB) 2026-05-20T09:56:23,640 Collecting packaging>=23.2 2026-05-20T09:56:23,641 Obtaining dependency information for packaging>=23.2 from https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata 2026-05-20T09:56:23,656 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata (3.5 kB) 2026-05-20T09:56:23,778 Collecting pathspec>=0.12.0 2026-05-20T09:56:23,779 Obtaining dependency information for pathspec>=0.12.0 from https://www.piwheels.org/simple/pathspec/pathspec-1.1.1-py3-none-any.whl.metadata 2026-05-20T09:56:23,794 Using cached https://www.piwheels.org/simple/pathspec/pathspec-1.1.1-py3-none-any.whl.metadata (14 kB) 2026-05-20T09:56:23,855 Using cached https://www.piwheels.org/simple/nanobind/nanobind-2.12.0-py3-none-any.whl (249 kB) 2026-05-20T09:56:23,883 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB) 2026-05-20T09:56:23,902 Using cached https://www.piwheels.org/simple/pathspec/pathspec-1.1.1-py3-none-any.whl (57 kB) 2026-05-20T09:56:23,932 Using cached https://www.piwheels.org/simple/nanobind/nanobind-2.12.0-py3-none-any.whl (249 kB) 2026-05-20T09:56:23,964 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB) 2026-05-20T09:56:23,989 Using cached https://www.piwheels.org/simple/pathspec/pathspec-1.1.1-py3-none-any.whl (57 kB) 2026-05-20T09:56:26,552 Installing collected packages: nanobind, pathspec, packaging, scikit-build-core 2026-05-20T09:56:27,930 Successfully installed nanobind-2.12.0 packaging-26.2 pathspec-1.1.1 scikit-build-core-0.12.2 2026-05-20T09:56:28,184 Installing build dependencies: finished with status 'done' 2026-05-20T09:56:28,191 Getting requirements to build wheel: started 2026-05-20T09:56:28,192 Running command Getting requirements to build wheel 2026-05-20T09:56:28,801 Getting requirements to build wheel: finished with status 'done' 2026-05-20T09:56:28,805 Created temporary directory: /tmp/pip-modern-metadata-77yd9_5m 2026-05-20T09:56:28,807 Preparing metadata (pyproject.toml): started 2026-05-20T09:56:28,808 Running command Preparing metadata (pyproject.toml) 2026-05-20T09:56:29,516 *** scikit-build-core 0.12.2 using CMake 3.25.1 (metadata_wheel) 2026-05-20T09:56:29,623 Preparing metadata (pyproject.toml): finished with status 'done' 2026-05-20T09:56:29,627 Source in /tmp/pip-wheel-53tlrwhs/bionify_52110dac49c849e885b0843994eee2d2 has version 0.1.3, which satisfies requirement bionify==0.1.3 from https://files.pythonhosted.org/packages/27/8c/eef68408567deea13a0dcd794817eee6456ab09990204d8de163c4be6343/bionify-0.1.3.tar.gz 2026-05-20T09:56:29,628 Removed bionify==0.1.3 from https://files.pythonhosted.org/packages/27/8c/eef68408567deea13a0dcd794817eee6456ab09990204d8de163c4be6343/bionify-0.1.3.tar.gz from build tracker '/tmp/pip-build-tracker-g50op57x' 2026-05-20T09:56:29,634 Created temporary directory: /tmp/pip-unpack-xch6u9l5 2026-05-20T09:56:29,634 Building wheels for collected packages: bionify 2026-05-20T09:56:29,639 Created temporary directory: /tmp/pip-wheel-z186o45z 2026-05-20T09:56:29,639 Destination directory: /tmp/pip-wheel-z186o45z 2026-05-20T09:56:29,642 Building wheel for bionify (pyproject.toml): started 2026-05-20T09:56:29,643 Running command Building wheel for bionify (pyproject.toml) 2026-05-20T09:56:30,327 *** scikit-build-core 0.12.2 using CMake 3.25.1 (wheel) 2026-05-20T09:56:30,355 *** Configuring CMake... 2026-05-20T09:56:30,456 loading initial cache file build/cp311-cp311-linux_armv7l/CMakeInit.txt 2026-05-20T09:56:30,799 -- The CXX compiler identification is GNU 12.2.0 2026-05-20T09:56:30,855 -- Detecting CXX compiler ABI info 2026-05-20T09:56:31,211 -- Detecting CXX compiler ABI info - done 2026-05-20T09:56:31,250 -- Check for working CXX compiler: /usr/bin/arm-linux-gnueabihf-g++ - skipped 2026-05-20T09:56:31,252 -- Detecting CXX compile features 2026-05-20T09:56:31,254 -- Detecting CXX compile features - done 2026-05-20T09:56:31,969 -- Found Python: /usr/bin/python3 (found suitable version "3.11.2", minimum required is "3.9") found components: Interpreter Development.Module 2026-05-20T09:56:31,987 -- Configuring done 2026-05-20T09:56:32,027 -- Generating done 2026-05-20T09:56:32,073 -- Build files have been written to: /tmp/pip-wheel-53tlrwhs/bionify_52110dac49c849e885b0843994eee2d2/build/cp311-cp311-linux_armv7l 2026-05-20T09:56:32,104 *** Building project with Ninja... 2026-05-20T09:56:36,639 [1/13] Building CXX object CMakeFiles/bionify_ext.dir/src/bionify_ext.cpp.o 2026-05-20T09:56:41,458 [2/13] Building CXX object CMakeFiles/nanobind-static.dir/tmp/pip-build-env-6qy7c67d/overlay/local/lib/python3.11/dist-packages/nanobind/src/nb_internals.cpp.o 2026-05-20T09:56:42,878 [3/13] Building CXX object CMakeFiles/nanobind-static.dir/tmp/pip-build-env-6qy7c67d/overlay/local/lib/python3.11/dist-packages/nanobind/src/nb_static_property.cpp.o 2026-05-20T09:56:45,315 [4/13] Building CXX object CMakeFiles/nanobind-static.dir/tmp/pip-build-env-6qy7c67d/overlay/local/lib/python3.11/dist-packages/nanobind/src/nb_ndarray.cpp.o 2026-05-20T09:56:45,680 [5/13] Building CXX object CMakeFiles/nanobind-static.dir/tmp/pip-build-env-6qy7c67d/overlay/local/lib/python3.11/dist-packages/nanobind/src/nb_func.cpp.o 2026-05-20T09:56:46,832 [6/13] Building CXX object CMakeFiles/nanobind-static.dir/tmp/pip-build-env-6qy7c67d/overlay/local/lib/python3.11/dist-packages/nanobind/src/nb_type.cpp.o 2026-05-20T09:56:48,600 [7/13] Building CXX object CMakeFiles/nanobind-static.dir/tmp/pip-build-env-6qy7c67d/overlay/local/lib/python3.11/dist-packages/nanobind/src/nb_enum.cpp.o 2026-05-20T09:56:51,195 [8/13] Building CXX object CMakeFiles/nanobind-static.dir/tmp/pip-build-env-6qy7c67d/overlay/local/lib/python3.11/dist-packages/nanobind/src/error.cpp.o 2026-05-20T09:56:51,424 [9/13] Building CXX object CMakeFiles/nanobind-static.dir/tmp/pip-build-env-6qy7c67d/overlay/local/lib/python3.11/dist-packages/nanobind/src/common.cpp.o 2026-05-20T09:56:51,469 [10/13] Building CXX object CMakeFiles/nanobind-static.dir/tmp/pip-build-env-6qy7c67d/overlay/local/lib/python3.11/dist-packages/nanobind/src/trampoline.cpp.o 2026-05-20T09:56:51,483 [11/13] Building CXX object CMakeFiles/nanobind-static.dir/tmp/pip-build-env-6qy7c67d/overlay/local/lib/python3.11/dist-packages/nanobind/src/implicit.cpp.o 2026-05-20T09:56:51,737 [12/13] Linking CXX static library libnanobind-static.a 2026-05-20T09:56:52,040 [13/13] Linking CXX shared module bionify_ext.cpython-311-arm-linux-gnueabihf.so 2026-05-20T09:56:52,046 *** Installing project into wheel... 2026-05-20T09:56:52,085 -- Install configuration: "Release" 2026-05-20T09:56:52,087 -- Installing: /tmp/tmpxpw2h5yy/wheel/platlib/bionify/bionify_ext.cpython-311-arm-linux-gnueabihf.so 2026-05-20T09:56:52,107 -- Installing: /tmp/tmpxpw2h5yy/wheel/platlib/bionify/__init__.py 2026-05-20T09:56:52,110 -- Installing: /tmp/tmpxpw2h5yy/wheel/platlib/bionify/_core.py 2026-05-20T09:56:52,113 -- Installing: /tmp/tmpxpw2h5yy/wheel/platlib/bionify/hook.py 2026-05-20T09:56:52,120 *** Making wheel... 2026-05-20T09:56:52,193 *** Created bionify-0.1.3-cp311-cp311-linux_armv7l.whl 2026-05-20T09:56:52,261 Building wheel for bionify (pyproject.toml): finished with status 'done' 2026-05-20T09:56:52,266 Created wheel for bionify: filename=bionify-0.1.3-cp311-cp311-linux_armv7l.whl size=35982 sha256=da81b6c2c9ae3f4efcf23a05ebd95a2f67ca2f6ea6d604a9214d799be84e9eec 2026-05-20T09:56:52,267 Stored in directory: /tmp/pip-ephem-wheel-cache-wvo5dypa/wheels/60/c5/69/977129a0d40410355dd398cc728051cb60f22312da82e98cc4 2026-05-20T09:56:52,278 Successfully built bionify 2026-05-20T09:56:52,282 Removed build tracker: '/tmp/pip-build-tracker-g50op57x'