2026-05-20T11:14:51,389 Created temporary directory: /tmp/pip-ephem-wheel-cache-tiyvpoi5 2026-05-20T11:14:51,390 Created temporary directory: /tmp/pip-build-tracker-mz81nmna 2026-05-20T11:14:51,391 Initialized build tracking at /tmp/pip-build-tracker-mz81nmna 2026-05-20T11:14:51,392 Created build tracker: /tmp/pip-build-tracker-mz81nmna 2026-05-20T11:14:51,392 Entered build tracker: /tmp/pip-build-tracker-mz81nmna 2026-05-20T11:14:51,393 Created temporary directory: /tmp/pip-wheel-yzhuvx0j 2026-05-20T11:14:51,396 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-05-20T11:14:51,398 Created temporary directory: /tmp/pip-ephem-wheel-cache-p0f1d1g5 2026-05-20T11:14:51,419 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-05-20T11:14:51,423 2 location(s) to search for versions of tfbs-footprinting3: 2026-05-20T11:14:51,423 * https://pypi.org/simple/tfbs-footprinting3/ 2026-05-20T11:14:51,423 * https://www.piwheels.org/simple/tfbs-footprinting3/ 2026-05-20T11:14:51,424 Fetching project page and analyzing links: https://pypi.org/simple/tfbs-footprinting3/ 2026-05-20T11:14:51,424 Getting page https://pypi.org/simple/tfbs-footprinting3/ 2026-05-20T11:14:51,426 Found index url https://pypi.org/simple 2026-05-20T11:14:51,653 Fetched page https://pypi.org/simple/tfbs-footprinting3/ as application/vnd.pypi.simple.v1+json 2026-05-20T11:14:51,658 Found link https://files.pythonhosted.org/packages/2c/aa/23f9efd1de4485eb539ed7c434656f9c4b60059c3d2ba4b3a57e44982d1e/TFBS_footprinting3-0.0.1.tar.gz (from https://pypi.org/simple/tfbs-footprinting3/), version: 0.0.1 2026-05-20T11:14:51,659 Found link https://files.pythonhosted.org/packages/2e/e7/cfcc48100dbafc25b211a79bb31c8ef5358e80470eb45f33e80b8109ed7f/TFBS_footprinting3-0.0.2.tar.gz (from https://pypi.org/simple/tfbs-footprinting3/), version: 0.0.2 2026-05-20T11:14:51,659 Found link https://files.pythonhosted.org/packages/69/e7/14fdb3196e90616f2200c03c42759b6ded4355f686e3c9aba31abd76b9e0/TFBS_footprinting3-0.0.3.tar.gz (from https://pypi.org/simple/tfbs-footprinting3/), version: 0.0.3 2026-05-20T11:14:51,660 Found link https://files.pythonhosted.org/packages/86/67/70e403ccbb50277ea3ed6b3d6760755363012324df0ab11110cba7c19e46/TFBS_footprinting3-0.0.4.tar.gz (from https://pypi.org/simple/tfbs-footprinting3/), version: 0.0.4 2026-05-20T11:14:51,661 Skipping link: No binaries permitted for tfbs-footprinting3: https://files.pythonhosted.org/packages/a1/cd/6b2353f1cff80e5592de477a3cb7de49e8509f6577ac731bd461e9c398a0/TFBS_footprinting3-0.0.5-py3-none-any.whl (from https://pypi.org/simple/tfbs-footprinting3/) 2026-05-20T11:14:51,662 Found link https://files.pythonhosted.org/packages/e7/51/4ddec91398719060f2756891ec2cd44abb689d0521b9819a2f953f5da768/TFBS_footprinting3-0.0.5.tar.gz (from https://pypi.org/simple/tfbs-footprinting3/), version: 0.0.5 2026-05-20T11:14:51,663 Skipping link: No binaries permitted for tfbs-footprinting3: https://files.pythonhosted.org/packages/d2/9a/53d98ae336ec3f0707bffb86a40c5d89690bcc8353b58b32f301dc076ae9/TFBS_footprinting3-0.0.6-py3-none-any.whl (from https://pypi.org/simple/tfbs-footprinting3/) 2026-05-20T11:14:51,663 Found link https://files.pythonhosted.org/packages/75/37/9ae713213d71fb0cd39560a0fd505e78e2009577ed302c1682824034bce9/TFBS_footprinting3-0.0.6.tar.gz (from https://pypi.org/simple/tfbs-footprinting3/), version: 0.0.6 2026-05-20T11:14:51,664 Skipping link: No binaries permitted for tfbs-footprinting3: https://files.pythonhosted.org/packages/21/c1/aa2c0d604820d308d1d8b20b6cd47e3f7d4d748a3d5d659c92fbbc468313/tfbs_footprinting3-0.0.7-py3-none-any.whl (from https://pypi.org/simple/tfbs-footprinting3/) (requires-python:>=3.7) 2026-05-20T11:14:51,665 Found link https://files.pythonhosted.org/packages/73/9e/24dfad3c16663bdd4d0929a2214b69c20dddcbdfb76585a1ebcb96a4eaa4/tfbs_footprinting3-0.0.7.tar.gz (from https://pypi.org/simple/tfbs-footprinting3/) (requires-python:>=3.7), version: 0.0.7 2026-05-20T11:14:51,666 Skipping link: No binaries permitted for tfbs-footprinting3: https://files.pythonhosted.org/packages/a2/f9/4d6d392bb4d347dde6c13b59bf2b8ae06cee39049079afb6517f1de551ba/tfbs_footprinting3-0.1.0-py3-none-any.whl (from https://pypi.org/simple/tfbs-footprinting3/) (requires-python:>=3.7) 2026-05-20T11:14:51,667 Found link https://files.pythonhosted.org/packages/fe/37/3311474fd0fb55f85ce81047608d1780e15a7ab09155123c86bc701764ed/tfbs_footprinting3-0.1.0.tar.gz (from https://pypi.org/simple/tfbs-footprinting3/) (requires-python:>=3.7), version: 0.1.0 2026-05-20T11:14:51,668 Skipping link: No binaries permitted for tfbs-footprinting3: https://files.pythonhosted.org/packages/25/eb/4ea97ef903a1c050107df28257da3e1c53e5005f03e76b17ec31804baaaa/tfbs_footprinting3-0.1.1-py3-none-any.whl (from https://pypi.org/simple/tfbs-footprinting3/) (requires-python:>=3.7) 2026-05-20T11:14:51,668 Found link https://files.pythonhosted.org/packages/8a/b2/675ae4f6ec02403bc806a35726a6b9f5aeeb285522ecd73e0c8419701a1b/tfbs_footprinting3-0.1.1.tar.gz (from https://pypi.org/simple/tfbs-footprinting3/) (requires-python:>=3.7), version: 0.1.1 2026-05-20T11:14:51,669 Skipping link: No binaries permitted for tfbs-footprinting3: https://files.pythonhosted.org/packages/68/21/620c113f2380a0cf22122b82a5f55a600c1a8bcc0a290bd42c87455167a2/tfbs_footprinting3-0.1.2-py3-none-any.whl (from https://pypi.org/simple/tfbs-footprinting3/) (requires-python:>=3.7) 2026-05-20T11:14:51,670 Found link https://files.pythonhosted.org/packages/d0/30/4b1f91ac0df86fe7563477b2c52aaeb1431973ea90d30a2fd1d87c988163/tfbs_footprinting3-0.1.2.tar.gz (from https://pypi.org/simple/tfbs-footprinting3/) (requires-python:>=3.7), version: 0.1.2 2026-05-20T11:14:51,670 Skipping link: No binaries permitted for tfbs-footprinting3: https://files.pythonhosted.org/packages/de/7a/0b99134c925cb832cc378bfb4457ac4622db3f591ca3aa8cf5867d021d31/tfbs_footprinting3-0.1.3-py3-none-any.whl (from https://pypi.org/simple/tfbs-footprinting3/) (requires-python:>=3.7) 2026-05-20T11:14:51,671 Found link https://files.pythonhosted.org/packages/a2/88/5037f80287f6affb73a90f7224a2128d558895ea4c7969c897cc09ad1b32/tfbs_footprinting3-0.1.3.tar.gz (from https://pypi.org/simple/tfbs-footprinting3/) (requires-python:>=3.7), version: 0.1.3 2026-05-20T11:14:51,672 Fetching project page and analyzing links: https://www.piwheels.org/simple/tfbs-footprinting3/ 2026-05-20T11:14:51,673 Getting page https://www.piwheels.org/simple/tfbs-footprinting3/ 2026-05-20T11:14:51,675 Found index url https://www.piwheels.org/simple 2026-05-20T11:14:51,845 Fetched page https://www.piwheels.org/simple/tfbs-footprinting3/ as text/html 2026-05-20T11:14:51,849 Skipping link: No binaries permitted for tfbs-footprinting3: https://archive1.piwheels.org/simple/tfbs-footprinting3/tfbs_footprinting3-0.1.2-py3-none-any.whl#sha256=a88e2cd45dcf39fa5c3f70b29562ad1f884feec964e5a24afa85cf36476c2274 (from https://www.piwheels.org/simple/tfbs-footprinting3/) (requires-python:>=3.7) 2026-05-20T11:14:51,850 Skipping link: No binaries permitted for tfbs-footprinting3: https://archive1.piwheels.org/simple/tfbs-footprinting3/tfbs_footprinting3-0.1.1-py3-none-any.whl#sha256=41686f24e45400fdbb8398448c4151c22356def14e7a4ce18ae5a02f7ab73602 (from https://www.piwheels.org/simple/tfbs-footprinting3/) (requires-python:>=3.7) 2026-05-20T11:14:51,850 Skipping link: No binaries permitted for tfbs-footprinting3: https://archive1.piwheels.org/simple/tfbs-footprinting3/tfbs_footprinting3-0.1.0-py3-none-any.whl#sha256=67fd30c7ac16e1b144aacf9176e66cef68d4ca89f73226e09596125f7869fc42 (from https://www.piwheels.org/simple/tfbs-footprinting3/) (requires-python:>=3.7) 2026-05-20T11:14:51,851 Skipping link: No binaries permitted for tfbs-footprinting3: https://archive1.piwheels.org/simple/tfbs-footprinting3/tfbs_footprinting3-0.0.7-py3-none-any.whl#sha256=ffa7a49b079b8b3fee14d7938bb3ac2665d305e39aebe3a4def15bd14e9cc90e (from https://www.piwheels.org/simple/tfbs-footprinting3/) (requires-python:>=3.7) 2026-05-20T11:14:51,852 Skipping link: No binaries permitted for tfbs-footprinting3: https://archive1.piwheels.org/simple/tfbs-footprinting3/TFBS_footprinting3-0.0.6-py3-none-any.whl#sha256=5f33a47913c824cad9f8fdaf8a25c24128b45aac27f1c3949f2714d52004bb88 (from https://www.piwheels.org/simple/tfbs-footprinting3/) 2026-05-20T11:14:51,852 Skipping link: No binaries permitted for tfbs-footprinting3: https://archive1.piwheels.org/simple/tfbs-footprinting3/TFBS_footprinting3-0.0.5-py3-none-any.whl#sha256=c2ac7ba7014564444c3576ef644ed33154dd8d5a503278fa88762de35b4e4757 (from https://www.piwheels.org/simple/tfbs-footprinting3/) 2026-05-20T11:14:51,853 Skipping link: No binaries permitted for tfbs-footprinting3: https://archive1.piwheels.org/simple/tfbs-footprinting3/TFBS_footprinting3-0.0.4-py3-none-any.whl#sha256=2f6ae98ba9b84076f0b2b515e414d65c678c22ce701442b3e91ddbe323878089 (from https://www.piwheels.org/simple/tfbs-footprinting3/) 2026-05-20T11:14:51,853 Skipping link: No binaries permitted for tfbs-footprinting3: https://archive1.piwheels.org/simple/tfbs-footprinting3/TFBS_footprinting3-0.0.3-py3-none-any.whl#sha256=e3263a9f1a717db8c4c364a0ea610924100fc1a654f7972f86c005025fbe9af6 (from https://www.piwheels.org/simple/tfbs-footprinting3/) 2026-05-20T11:14:51,854 Skipping link: No binaries permitted for tfbs-footprinting3: https://archive1.piwheels.org/simple/tfbs-footprinting3/TFBS_footprinting3-0.0.2-py3-none-any.whl#sha256=3ed872282149b66339740cd50ba14f3dca78c7748427b2a9518f0b22316ee897 (from https://www.piwheels.org/simple/tfbs-footprinting3/) 2026-05-20T11:14:51,854 Skipping link: No binaries permitted for tfbs-footprinting3: https://archive1.piwheels.org/simple/tfbs-footprinting3/TFBS_footprinting3-0.0.1-py3-none-any.whl#sha256=d46244741f2f36f8a40d101675b8437dda7cf7cacc611958f17888d62b295405 (from https://www.piwheels.org/simple/tfbs-footprinting3/) 2026-05-20T11:14:51,855 Skipping link: not a file: https://www.piwheels.org/simple/tfbs-footprinting3/ 2026-05-20T11:14:51,855 Skipping link: not a file: https://pypi.org/simple/tfbs-footprinting3/ 2026-05-20T11:14:51,876 Given no hashes to check 1 links for project 'tfbs-footprinting3': discarding no candidates 2026-05-20T11:14:51,894 Collecting tfbs-footprinting3==0.1.3 2026-05-20T11:14:51,896 Created temporary directory: /tmp/pip-unpack-f7fb7_u2 2026-05-20T11:14:52,124 Downloading tfbs_footprinting3-0.1.3.tar.gz (209 kB) 2026-05-20T11:14:52,322 Added tfbs-footprinting3==0.1.3 from https://files.pythonhosted.org/packages/a2/88/5037f80287f6affb73a90f7224a2128d558895ea4c7969c897cc09ad1b32/tfbs_footprinting3-0.1.3.tar.gz to build tracker '/tmp/pip-build-tracker-mz81nmna' 2026-05-20T11:14:52,328 Created temporary directory: /tmp/pip-build-env-sqjsfk_v 2026-05-20T11:14:52,332 Installing build dependencies: started 2026-05-20T11:14:52,334 Running command pip subprocess to install build dependencies 2026-05-20T11:14:53,456 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-05-20T11:14:53,864 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-05-20T11:14:53,887 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-05-20T11:14:55,712 Collecting setuptools>=42 2026-05-20T11:14:55,713 Obtaining dependency information for setuptools>=42 from https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl.metadata 2026-05-20T11:14:55,742 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl.metadata (6.5 kB) 2026-05-20T11:14:55,976 Collecting wheel 2026-05-20T11:14:55,977 Obtaining dependency information for wheel from https://www.piwheels.org/simple/wheel/wheel-0.47.0-py3-none-any.whl.metadata 2026-05-20T11:14:55,990 Using cached https://www.piwheels.org/simple/wheel/wheel-0.47.0-py3-none-any.whl.metadata (2.3 kB) 2026-05-20T11:14:56,168 Collecting packaging>=24.0 2026-05-20T11:14:56,169 Obtaining dependency information for packaging>=24.0 from https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata 2026-05-20T11:14:56,181 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata (3.5 kB) 2026-05-20T11:14:56,371 Using cached https://www.piwheels.org/simple/wheel/wheel-0.47.0-py3-none-any.whl (32 kB) 2026-05-20T11:14:56,388 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB) 2026-05-20T11:14:56,486 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-05-20T11:14:56,522 Using cached https://www.piwheels.org/simple/wheel/wheel-0.47.0-py3-none-any.whl (32 kB) 2026-05-20T11:14:56,546 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB) 2026-05-20T11:14:56,637 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-05-20T11:14:59,376 Installing collected packages: setuptools, packaging, wheel 2026-05-20T11:15:02,799 Creating /tmp/pip-build-env-sqjsfk_v/overlay/local/bin 2026-05-20T11:15:02,803 changing mode of /tmp/pip-build-env-sqjsfk_v/overlay/local/bin/wheel to 755 2026-05-20T11:15:02,824 Successfully installed packaging-26.2 setuptools-82.0.1 wheel-0.47.0 2026-05-20T11:15:03,108 Installing build dependencies: finished with status 'done' 2026-05-20T11:15:03,115 Getting requirements to build wheel: started 2026-05-20T11:15:03,116 Running command Getting requirements to build wheel 2026-05-20T11:15:03,756 /tmp/pip-build-env-sqjsfk_v/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-05-20T11:15:03,757 !! 2026-05-20T11:15:03,758 ******************************************************************************** 2026-05-20T11:15:03,758 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-05-20T11:15:03,760 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-05-20T11:15:03,760 or your builds will no longer be supported. 2026-05-20T11:15:03,762 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-20T11:15:03,762 ******************************************************************************** 2026-05-20T11:15:03,763 !! 2026-05-20T11:15:03,764 corresp(dist, value, root_dir) 2026-05-20T11:15:03,836 /tmp/pip-build-env-sqjsfk_v/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-20T11:15:03,836 !! 2026-05-20T11:15:03,837 ******************************************************************************** 2026-05-20T11:15:03,838 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-20T11:15:03,839 License :: OSI Approved :: MIT License 2026-05-20T11:15:03,840 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-20T11:15:03,841 ******************************************************************************** 2026-05-20T11:15:03,842 !! 2026-05-20T11:15:03,843 dist._finalize_license_expression() 2026-05-20T11:15:03,843 /tmp/pip-build-env-sqjsfk_v/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-20T11:15:03,844 !! 2026-05-20T11:15:03,845 ******************************************************************************** 2026-05-20T11:15:03,846 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-20T11:15:03,847 License :: OSI Approved :: MIT License 2026-05-20T11:15:03,847 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-20T11:15:03,848 ******************************************************************************** 2026-05-20T11:15:03,849 !! 2026-05-20T11:15:03,849 self._finalize_license_expression() 2026-05-20T11:15:03,850 running egg_info 2026-05-20T11:15:03,852 writing TFBS_footprinting3.egg-info/PKG-INFO 2026-05-20T11:15:03,857 writing dependency_links to TFBS_footprinting3.egg-info/dependency_links.txt 2026-05-20T11:15:03,859 writing entry points to TFBS_footprinting3.egg-info/entry_points.txt 2026-05-20T11:15:03,862 writing requirements to TFBS_footprinting3.egg-info/requires.txt 2026-05-20T11:15:03,863 writing top-level names to TFBS_footprinting3.egg-info/top_level.txt 2026-05-20T11:15:03,884 reading manifest file 'TFBS_footprinting3.egg-info/SOURCES.txt' 2026-05-20T11:15:03,888 reading manifest template 'MANIFEST.in' 2026-05-20T11:15:03,890 adding license file 'LICENSE' 2026-05-20T11:15:03,894 writing manifest file 'TFBS_footprinting3.egg-info/SOURCES.txt' 2026-05-20T11:15:03,991 Getting requirements to build wheel: finished with status 'done' 2026-05-20T11:15:03,994 Created temporary directory: /tmp/pip-modern-metadata-mxf32yf_ 2026-05-20T11:15:03,997 Preparing metadata (pyproject.toml): started 2026-05-20T11:15:03,998 Running command Preparing metadata (pyproject.toml) 2026-05-20T11:15:04,550 /tmp/pip-build-env-sqjsfk_v/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-05-20T11:15:04,551 !! 2026-05-20T11:15:04,552 ******************************************************************************** 2026-05-20T11:15:04,552 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-05-20T11:15:04,554 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-05-20T11:15:04,554 or your builds will no longer be supported. 2026-05-20T11:15:04,555 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-20T11:15:04,556 ******************************************************************************** 2026-05-20T11:15:04,557 !! 2026-05-20T11:15:04,557 corresp(dist, value, root_dir) 2026-05-20T11:15:04,626 /tmp/pip-build-env-sqjsfk_v/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-20T11:15:04,627 !! 2026-05-20T11:15:04,628 ******************************************************************************** 2026-05-20T11:15:04,629 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-20T11:15:04,630 License :: OSI Approved :: MIT License 2026-05-20T11:15:04,631 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-20T11:15:04,631 ******************************************************************************** 2026-05-20T11:15:04,632 !! 2026-05-20T11:15:04,633 dist._finalize_license_expression() 2026-05-20T11:15:04,634 /tmp/pip-build-env-sqjsfk_v/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-20T11:15:04,634 !! 2026-05-20T11:15:04,635 ******************************************************************************** 2026-05-20T11:15:04,636 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-20T11:15:04,637 License :: OSI Approved :: MIT License 2026-05-20T11:15:04,638 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-20T11:15:04,638 ******************************************************************************** 2026-05-20T11:15:04,639 !! 2026-05-20T11:15:04,639 self._finalize_license_expression() 2026-05-20T11:15:04,640 running dist_info 2026-05-20T11:15:04,648 creating /tmp/pip-modern-metadata-mxf32yf_/TFBS_footprinting3.egg-info 2026-05-20T11:15:04,649 writing /tmp/pip-modern-metadata-mxf32yf_/TFBS_footprinting3.egg-info/PKG-INFO 2026-05-20T11:15:04,655 writing dependency_links to /tmp/pip-modern-metadata-mxf32yf_/TFBS_footprinting3.egg-info/dependency_links.txt 2026-05-20T11:15:04,656 writing entry points to /tmp/pip-modern-metadata-mxf32yf_/TFBS_footprinting3.egg-info/entry_points.txt 2026-05-20T11:15:04,659 writing requirements to /tmp/pip-modern-metadata-mxf32yf_/TFBS_footprinting3.egg-info/requires.txt 2026-05-20T11:15:04,660 writing top-level names to /tmp/pip-modern-metadata-mxf32yf_/TFBS_footprinting3.egg-info/top_level.txt 2026-05-20T11:15:04,662 writing manifest file '/tmp/pip-modern-metadata-mxf32yf_/TFBS_footprinting3.egg-info/SOURCES.txt' 2026-05-20T11:15:04,680 reading manifest file '/tmp/pip-modern-metadata-mxf32yf_/TFBS_footprinting3.egg-info/SOURCES.txt' 2026-05-20T11:15:04,682 reading manifest template 'MANIFEST.in' 2026-05-20T11:15:04,684 adding license file 'LICENSE' 2026-05-20T11:15:04,688 writing manifest file '/tmp/pip-modern-metadata-mxf32yf_/TFBS_footprinting3.egg-info/SOURCES.txt' 2026-05-20T11:15:04,689 creating '/tmp/pip-modern-metadata-mxf32yf_/tfbs_footprinting3-0.1.3.dist-info' 2026-05-20T11:15:04,813 Preparing metadata (pyproject.toml): finished with status 'done' 2026-05-20T11:15:04,820 Source in /tmp/pip-wheel-yzhuvx0j/tfbs-footprinting3_1c62cb9d26764c4ca6be5d409a5a51d1 has version 0.1.3, which satisfies requirement tfbs-footprinting3==0.1.3 from https://files.pythonhosted.org/packages/a2/88/5037f80287f6affb73a90f7224a2128d558895ea4c7969c897cc09ad1b32/tfbs_footprinting3-0.1.3.tar.gz 2026-05-20T11:15:04,821 Removed tfbs-footprinting3==0.1.3 from https://files.pythonhosted.org/packages/a2/88/5037f80287f6affb73a90f7224a2128d558895ea4c7969c897cc09ad1b32/tfbs_footprinting3-0.1.3.tar.gz from build tracker '/tmp/pip-build-tracker-mz81nmna' 2026-05-20T11:15:04,829 Created temporary directory: /tmp/pip-unpack-pl56l21f 2026-05-20T11:15:04,829 Building wheels for collected packages: tfbs-footprinting3 2026-05-20T11:15:04,834 Created temporary directory: /tmp/pip-wheel-2bmxi5uj 2026-05-20T11:15:04,834 Destination directory: /tmp/pip-wheel-2bmxi5uj 2026-05-20T11:15:04,837 Building wheel for tfbs-footprinting3 (pyproject.toml): started 2026-05-20T11:15:04,838 Running command Building wheel for tfbs-footprinting3 (pyproject.toml) 2026-05-20T11:15:05,388 /tmp/pip-build-env-sqjsfk_v/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-05-20T11:15:05,388 !! 2026-05-20T11:15:05,390 ******************************************************************************** 2026-05-20T11:15:05,390 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-05-20T11:15:05,391 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-05-20T11:15:05,392 or your builds will no longer be supported. 2026-05-20T11:15:05,393 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-20T11:15:05,394 ******************************************************************************** 2026-05-20T11:15:05,395 !! 2026-05-20T11:15:05,396 corresp(dist, value, root_dir) 2026-05-20T11:15:05,457 /tmp/pip-build-env-sqjsfk_v/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-20T11:15:05,458 !! 2026-05-20T11:15:05,459 ******************************************************************************** 2026-05-20T11:15:05,459 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-20T11:15:05,460 License :: OSI Approved :: MIT License 2026-05-20T11:15:05,461 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-20T11:15:05,462 ******************************************************************************** 2026-05-20T11:15:05,463 !! 2026-05-20T11:15:05,463 dist._finalize_license_expression() 2026-05-20T11:15:05,464 /tmp/pip-build-env-sqjsfk_v/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-20T11:15:05,464 !! 2026-05-20T11:15:05,465 ******************************************************************************** 2026-05-20T11:15:05,465 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-20T11:15:05,466 License :: OSI Approved :: MIT License 2026-05-20T11:15:05,467 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-20T11:15:05,468 ******************************************************************************** 2026-05-20T11:15:05,469 !! 2026-05-20T11:15:05,469 self._finalize_license_expression() 2026-05-20T11:15:05,470 running bdist_wheel 2026-05-20T11:15:05,482 running build 2026-05-20T11:15:05,482 running build_py 2026-05-20T11:15:05,488 creating build/lib/tfbs_footprinter3 2026-05-20T11:15:05,490 copying tfbs_footprinter3/__init__.py -> build/lib/tfbs_footprinter3 2026-05-20T11:15:05,492 copying tfbs_footprinter3/scoring.py -> build/lib/tfbs_footprinter3 2026-05-20T11:15:05,495 copying tfbs_footprinter3/translators.py -> build/lib/tfbs_footprinter3 2026-05-20T11:15:05,498 copying tfbs_footprinter3/cli.py -> build/lib/tfbs_footprinter3 2026-05-20T11:15:05,500 copying tfbs_footprinter3/plotting.py -> build/lib/tfbs_footprinter3 2026-05-20T11:15:05,503 copying tfbs_footprinter3/ensembl.py -> build/lib/tfbs_footprinter3 2026-05-20T11:15:05,505 copying tfbs_footprinter3/data_loader.py -> build/lib/tfbs_footprinter3 2026-05-20T11:15:05,507 copying tfbs_footprinter3/alignment.py -> build/lib/tfbs_footprinter3 2026-05-20T11:15:05,510 copying tfbs_footprinter3/io_utils.py -> build/lib/tfbs_footprinter3 2026-05-20T11:15:05,512 copying tfbs_footprinter3/data_parsing.py -> build/lib/tfbs_footprinter3 2026-05-20T11:15:05,514 copying tfbs_footprinter3/pwm.py -> build/lib/tfbs_footprinter3 2026-05-20T11:15:05,515 copying tfbs_footprinter3/tfbs_footprinter3.py -> build/lib/tfbs_footprinter3 2026-05-20T11:15:05,517 copying tfbs_footprinter3/pipeline.py -> build/lib/tfbs_footprinter3 2026-05-20T11:15:05,520 copying tfbs_footprinter3/output.py -> build/lib/tfbs_footprinter3 2026-05-20T11:15:05,522 running egg_info 2026-05-20T11:15:05,532 writing TFBS_footprinting3.egg-info/PKG-INFO 2026-05-20T11:15:05,537 writing dependency_links to TFBS_footprinting3.egg-info/dependency_links.txt 2026-05-20T11:15:05,539 writing entry points to TFBS_footprinting3.egg-info/entry_points.txt 2026-05-20T11:15:05,541 writing requirements to TFBS_footprinting3.egg-info/requires.txt 2026-05-20T11:15:05,542 writing top-level names to TFBS_footprinting3.egg-info/top_level.txt 2026-05-20T11:15:05,553 reading manifest file 'TFBS_footprinting3.egg-info/SOURCES.txt' 2026-05-20T11:15:05,557 reading manifest template 'MANIFEST.in' 2026-05-20T11:15:05,559 adding license file 'LICENSE' 2026-05-20T11:15:05,563 writing manifest file 'TFBS_footprinting3.egg-info/SOURCES.txt' 2026-05-20T11:15:05,566 creating build/lib/tfbs_footprinter3/data 2026-05-20T11:15:05,567 copying tfbs_footprinter3/data/species_nt_freq.json -> build/lib/tfbs_footprinter3/data 2026-05-20T11:15:05,570 copying tfbs_footprinter3/data/JASPAR_2026_pwms.json -> build/lib/tfbs_footprinter3/data 2026-05-20T11:15:05,576 copying tfbs_footprinter3/data/pwms.json -> build/lib/tfbs_footprinter3/data 2026-05-20T11:15:05,591 installing to build/bdist.linux-armv7l/wheel 2026-05-20T11:15:05,592 running install 2026-05-20T11:15:05,614 running install_lib 2026-05-20T11:15:05,620 creating build/bdist.linux-armv7l/wheel 2026-05-20T11:15:05,622 creating build/bdist.linux-armv7l/wheel/tfbs_footprinter3 2026-05-20T11:15:05,623 copying build/lib/tfbs_footprinter3/__init__.py -> build/bdist.linux-armv7l/wheel/./tfbs_footprinter3 2026-05-20T11:15:05,624 copying build/lib/tfbs_footprinter3/scoring.py -> build/bdist.linux-armv7l/wheel/./tfbs_footprinter3 2026-05-20T11:15:05,627 copying build/lib/tfbs_footprinter3/translators.py -> build/bdist.linux-armv7l/wheel/./tfbs_footprinter3 2026-05-20T11:15:05,629 copying build/lib/tfbs_footprinter3/cli.py -> build/bdist.linux-armv7l/wheel/./tfbs_footprinter3 2026-05-20T11:15:05,632 creating build/bdist.linux-armv7l/wheel/tfbs_footprinter3/data 2026-05-20T11:15:05,633 copying build/lib/tfbs_footprinter3/data/species_nt_freq.json -> build/bdist.linux-armv7l/wheel/./tfbs_footprinter3/data 2026-05-20T11:15:05,636 copying build/lib/tfbs_footprinter3/data/JASPAR_2026_pwms.json -> build/bdist.linux-armv7l/wheel/./tfbs_footprinter3/data 2026-05-20T11:15:05,641 copying build/lib/tfbs_footprinter3/data/pwms.json -> build/bdist.linux-armv7l/wheel/./tfbs_footprinter3/data 2026-05-20T11:15:05,646 copying build/lib/tfbs_footprinter3/plotting.py -> build/bdist.linux-armv7l/wheel/./tfbs_footprinter3 2026-05-20T11:15:05,648 copying build/lib/tfbs_footprinter3/ensembl.py -> build/bdist.linux-armv7l/wheel/./tfbs_footprinter3 2026-05-20T11:15:05,650 copying build/lib/tfbs_footprinter3/data_loader.py -> build/bdist.linux-armv7l/wheel/./tfbs_footprinter3 2026-05-20T11:15:05,653 copying build/lib/tfbs_footprinter3/alignment.py -> build/bdist.linux-armv7l/wheel/./tfbs_footprinter3 2026-05-20T11:15:05,655 copying build/lib/tfbs_footprinter3/io_utils.py -> build/bdist.linux-armv7l/wheel/./tfbs_footprinter3 2026-05-20T11:15:05,657 copying build/lib/tfbs_footprinter3/data_parsing.py -> build/bdist.linux-armv7l/wheel/./tfbs_footprinter3 2026-05-20T11:15:05,659 copying build/lib/tfbs_footprinter3/pwm.py -> build/bdist.linux-armv7l/wheel/./tfbs_footprinter3 2026-05-20T11:15:05,660 copying build/lib/tfbs_footprinter3/tfbs_footprinter3.py -> build/bdist.linux-armv7l/wheel/./tfbs_footprinter3 2026-05-20T11:15:05,662 copying build/lib/tfbs_footprinter3/pipeline.py -> build/bdist.linux-armv7l/wheel/./tfbs_footprinter3 2026-05-20T11:15:05,665 copying build/lib/tfbs_footprinter3/output.py -> build/bdist.linux-armv7l/wheel/./tfbs_footprinter3 2026-05-20T11:15:05,667 running install_egg_info 2026-05-20T11:15:05,672 Copying TFBS_footprinting3.egg-info to build/bdist.linux-armv7l/wheel/./TFBS_footprinting3-0.1.3-py3.11.egg-info 2026-05-20T11:15:05,683 running install_scripts 2026-05-20T11:15:05,695 creating build/bdist.linux-armv7l/wheel/tfbs_footprinting3-0.1.3.dist-info/WHEEL 2026-05-20T11:15:05,698 creating '/tmp/pip-wheel-2bmxi5uj/.tmp-n6r5ftzn/tfbs_footprinting3-0.1.3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-05-20T11:15:05,700 adding 'tfbs_footprinter3/__init__.py' 2026-05-20T11:15:05,701 adding 'tfbs_footprinter3/alignment.py' 2026-05-20T11:15:05,705 adding 'tfbs_footprinter3/cli.py' 2026-05-20T11:15:05,707 adding 'tfbs_footprinter3/data_loader.py' 2026-05-20T11:15:05,709 adding 'tfbs_footprinter3/data_parsing.py' 2026-05-20T11:15:05,710 adding 'tfbs_footprinter3/ensembl.py' 2026-05-20T11:15:05,712 adding 'tfbs_footprinter3/io_utils.py' 2026-05-20T11:15:05,714 adding 'tfbs_footprinter3/output.py' 2026-05-20T11:15:05,717 adding 'tfbs_footprinter3/pipeline.py' 2026-05-20T11:15:05,719 adding 'tfbs_footprinter3/plotting.py' 2026-05-20T11:15:05,721 adding 'tfbs_footprinter3/pwm.py' 2026-05-20T11:15:05,725 adding 'tfbs_footprinter3/scoring.py' 2026-05-20T11:15:05,727 adding 'tfbs_footprinter3/tfbs_footprinter3.py' 2026-05-20T11:15:05,729 adding 'tfbs_footprinter3/translators.py' 2026-05-20T11:15:05,805 adding 'tfbs_footprinter3/data/JASPAR_2026_pwms.json' 2026-05-20T11:15:05,852 adding 'tfbs_footprinter3/data/pwms.json' 2026-05-20T11:15:05,859 adding 'tfbs_footprinter3/data/species_nt_freq.json' 2026-05-20T11:15:05,861 adding 'tfbs_footprinting3-0.1.3.dist-info/licenses/LICENSE' 2026-05-20T11:15:05,865 adding 'tfbs_footprinting3-0.1.3.dist-info/METADATA' 2026-05-20T11:15:05,866 adding 'tfbs_footprinting3-0.1.3.dist-info/WHEEL' 2026-05-20T11:15:05,867 adding 'tfbs_footprinting3-0.1.3.dist-info/entry_points.txt' 2026-05-20T11:15:05,868 adding 'tfbs_footprinting3-0.1.3.dist-info/top_level.txt' 2026-05-20T11:15:05,869 adding 'tfbs_footprinting3-0.1.3.dist-info/RECORD' 2026-05-20T11:15:05,872 removing build/bdist.linux-armv7l/wheel 2026-05-20T11:15:05,977 Building wheel for tfbs-footprinting3 (pyproject.toml): finished with status 'done' 2026-05-20T11:15:05,985 Created wheel for tfbs-footprinting3: filename=tfbs_footprinting3-0.1.3-py3-none-any.whl size=203468 sha256=017352eb00c17cbd59d83256944fdd74cc536604c8105583377a3e9c4a58fb83 2026-05-20T11:15:05,987 Stored in directory: /tmp/pip-ephem-wheel-cache-p0f1d1g5/wheels/32/35/fb/e48dba6269af778f9226fccba1c402bbea6b7d33e9f456a729 2026-05-20T11:15:06,001 Successfully built tfbs-footprinting3 2026-05-20T11:15:06,011 Removed build tracker: '/tmp/pip-build-tracker-mz81nmna'