2026-05-20T22:06:26,634 Created temporary directory: /tmp/pip-ephem-wheel-cache-cqas2dnz
2026-05-20T22:06:26,636 Created temporary directory: /tmp/pip-build-tracker-ym4l3cty
2026-05-20T22:06:26,637 Initialized build tracking at /tmp/pip-build-tracker-ym4l3cty
2026-05-20T22:06:26,637 Created build tracker: /tmp/pip-build-tracker-ym4l3cty
2026-05-20T22:06:26,638 Entered build tracker: /tmp/pip-build-tracker-ym4l3cty
2026-05-20T22:06:26,639 Created temporary directory: /tmp/pip-wheel-0f22a2_a
2026-05-20T22:06:26,642 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-05-20T22:06:26,644 Created temporary directory: /tmp/pip-ephem-wheel-cache-6miede5t
2026-05-20T22:06:26,666 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-05-20T22:06:26,669 2 location(s) to search for versions of vivarium-artifact:
2026-05-20T22:06:26,669 * https://pypi.org/simple/vivarium-artifact/
2026-05-20T22:06:26,669 * https://www.piwheels.org/simple/vivarium-artifact/
2026-05-20T22:06:26,670 Fetching project page and analyzing links: https://pypi.org/simple/vivarium-artifact/
2026-05-20T22:06:26,671 Getting page https://pypi.org/simple/vivarium-artifact/
2026-05-20T22:06:26,672 Found index url https://pypi.org/simple
2026-05-20T22:06:26,899 Fetched page https://pypi.org/simple/vivarium-artifact/ as application/vnd.pypi.simple.v1+json
2026-05-20T22:06:26,900   Skipping link: No binaries permitted for vivarium-artifact: https://files.pythonhosted.org/packages/ec/eb/55d6a2207114fba503180e4cc6146f89c66adfdbe7207e171f4bd486cfc2/vivarium_artifact-1.0.0-py3-none-any.whl (from https://pypi.org/simple/vivarium-artifact/) (requires-python:>=3.10)
2026-05-20T22:06:26,901   Found link https://files.pythonhosted.org/packages/c9/db/5b676fd35a5129eb2c1b144843f047a73eadceb3271475459890fd6c885e/vivarium_artifact-1.0.0.tar.gz (from https://pypi.org/simple/vivarium-artifact/) (requires-python:>=3.10), version: 1.0.0
2026-05-20T22:06:26,902 Fetching project page and analyzing links: https://www.piwheels.org/simple/vivarium-artifact/
2026-05-20T22:06:26,903 Getting page https://www.piwheels.org/simple/vivarium-artifact/
2026-05-20T22:06:26,904 Found index url https://www.piwheels.org/simple
2026-05-20T22:06:31,816 Fetched page https://www.piwheels.org/simple/vivarium-artifact/ as text/html
2026-05-20T22:06:31,818 Skipping link: not a file: https://www.piwheels.org/simple/vivarium-artifact/
2026-05-20T22:06:31,819 Skipping link: not a file: https://pypi.org/simple/vivarium-artifact/
2026-05-20T22:06:31,860 Given no hashes to check 1 links for project 'vivarium-artifact': discarding no candidates
2026-05-20T22:06:31,891 Collecting vivarium-artifact==1.0.0
2026-05-20T22:06:31,894   Created temporary directory: /tmp/pip-unpack-ixezayjb
2026-05-20T22:06:32,123   Downloading vivarium_artifact-1.0.0.tar.gz (406 kB)
2026-05-20T22:06:32,356   Added vivarium-artifact==1.0.0 from https://files.pythonhosted.org/packages/c9/db/5b676fd35a5129eb2c1b144843f047a73eadceb3271475459890fd6c885e/vivarium_artifact-1.0.0.tar.gz to build tracker '/tmp/pip-build-tracker-ym4l3cty'
2026-05-20T22:06:32,363   Created temporary directory: /tmp/pip-build-env-mbsdc28i
2026-05-20T22:06:32,368   Installing build dependencies: started
2026-05-20T22:06:32,370   Running command pip subprocess to install build dependencies
2026-05-20T22:06:33,550   Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11)
2026-05-20T22:06:34,036   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-05-20T22:06:34,060   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-05-20T22:06:40,735   Collecting setuptools>=61.0
2026-05-20T22:06:40,736     Obtaining dependency information for setuptools>=61.0 from https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl.metadata
2026-05-20T22:06:40,750     Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl.metadata (6.5 kB)
2026-05-20T22:06:41,095   Collecting setuptools_scm[toml]>=8.0
2026-05-20T22:06:41,096     Obtaining dependency information for setuptools_scm[toml]>=8.0 from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl.metadata
2026-05-20T22:06:41,111     Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl.metadata (6.5 kB)
2026-05-20T22:06:41,121   Discarding https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl#sha256=600c37b3fea2bb517f59d76792adae856d0b5ce7735b186e4cde804375251321 (from https://www.piwheels.org/simple/setuptools-scm/) (requires-python:>=3.10): Requested setuptools_scm>=8.0 from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl#sha256=600c37b3fea2bb517f59d76792adae856d0b5ce7735b186e4cde804375251321 has inconsistent Name: expected 'setuptools_scm', but metadata has 'setuptools-scm'
2026-05-20T22:06:41,146     Using cached setuptools_scm-10.0.5-py3-none-any.whl (21 kB)
2026-05-20T22:06:41,230   Collecting vcs-versioning>=1.0.0.dev0
2026-05-20T22:06:41,231     Obtaining dependency information for vcs-versioning>=1.0.0.dev0 from https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl.metadata
2026-05-20T22:06:41,244     Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl.metadata (1.6 kB)
2026-05-20T22:06:41,427   Collecting packaging>=20
2026-05-20T22:06:41,429     Obtaining dependency information for packaging>=20 from https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata
2026-05-20T22:06:41,442     Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata (3.5 kB)
2026-05-20T22:06:41,663   Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB)
2026-05-20T22:06:41,682   Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl (79 kB)
2026-05-20T22:06:41,783   Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB)
2026-05-20T22:06:41,826   Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB)
2026-05-20T22:06:41,854   Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl (79 kB)
2026-05-20T22:06:41,949   Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB)
2026-05-20T22:06:44,764   Installing collected packages: setuptools, packaging, vcs-versioning, setuptools_scm
2026-05-20T22:06:48,416     Creating /tmp/pip-build-env-mbsdc28i/overlay/local/bin
2026-05-20T22:06:48,418     changing mode of /tmp/pip-build-env-mbsdc28i/overlay/local/bin/vcs-versioning to 755
2026-05-20T22:06:48,523     changing mode of /tmp/pip-build-env-mbsdc28i/overlay/local/bin/setuptools-scm to 755
2026-05-20T22:06:48,550   Successfully installed packaging-26.2 setuptools-82.0.1 setuptools_scm-10.0.5 vcs-versioning-1.1.1
2026-05-20T22:06:48,844   Installing build dependencies: finished with status 'done'
2026-05-20T22:06:48,851   Getting requirements to build wheel: started
2026-05-20T22:06:48,852   Running command Getting requirements to build wheel
2026-05-20T22:06:49,579   /tmp/pip-build-env-mbsdc28i/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2026-05-20T22:06:49,579   !!

2026-05-20T22:06:49,580           ********************************************************************************
2026-05-20T22:06:49,581           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2026-05-20T22:06:49,582           By 2027-Feb-18, you need to update your project and remove deprecated calls
2026-05-20T22:06:49,582           or your builds will no longer be supported.

2026-05-20T22:06:49,583           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-05-20T22:06:49,583           ********************************************************************************

2026-05-20T22:06:49,584   !!
2026-05-20T22:06:49,584     corresp(dist, value, root_dir)
2026-05-20T22:06:49,662   running egg_info
2026-05-20T22:06:49,670   writing src/vivarium_artifact.egg-info/PKG-INFO
2026-05-20T22:06:49,675   writing dependency_links to src/vivarium_artifact.egg-info/dependency_links.txt
2026-05-20T22:06:49,678   writing requirements to src/vivarium_artifact.egg-info/requires.txt
2026-05-20T22:06:49,680   writing top-level names to src/vivarium_artifact.egg-info/top_level.txt
2026-05-20T22:06:49,714   /tmp/pip-build-env-mbsdc28i/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly.
2026-05-20T22:06:49,714     return get_active_overrides().subprocess_timeout
2026-05-20T22:06:49,721   listing git files failed - pretending there aren't any
2026-05-20T22:06:49,726   reading manifest file 'src/vivarium_artifact.egg-info/SOURCES.txt'
2026-05-20T22:06:49,731   adding license file 'LICENSE'
2026-05-20T22:06:49,734   writing manifest file 'src/vivarium_artifact.egg-info/SOURCES.txt'
2026-05-20T22:06:49,838   Getting requirements to build wheel: finished with status 'done'
2026-05-20T22:06:49,841   Created temporary directory: /tmp/pip-modern-metadata-2cqij0mh
2026-05-20T22:06:49,844   Preparing metadata (pyproject.toml): started
2026-05-20T22:06:49,845   Running command Preparing metadata (pyproject.toml)
2026-05-20T22:06:50,499   /tmp/pip-build-env-mbsdc28i/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2026-05-20T22:06:50,500   !!

2026-05-20T22:06:50,501           ********************************************************************************
2026-05-20T22:06:50,502           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2026-05-20T22:06:50,503           By 2027-Feb-18, you need to update your project and remove deprecated calls
2026-05-20T22:06:50,503           or your builds will no longer be supported.

2026-05-20T22:06:50,505           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-05-20T22:06:50,506           ********************************************************************************

2026-05-20T22:06:50,507   !!
2026-05-20T22:06:50,508     corresp(dist, value, root_dir)
2026-05-20T22:06:50,585   running dist_info
2026-05-20T22:06:50,599   creating /tmp/pip-modern-metadata-2cqij0mh/vivarium_artifact.egg-info
2026-05-20T22:06:50,600   writing /tmp/pip-modern-metadata-2cqij0mh/vivarium_artifact.egg-info/PKG-INFO
2026-05-20T22:06:50,605   writing dependency_links to /tmp/pip-modern-metadata-2cqij0mh/vivarium_artifact.egg-info/dependency_links.txt
2026-05-20T22:06:50,609   writing requirements to /tmp/pip-modern-metadata-2cqij0mh/vivarium_artifact.egg-info/requires.txt
2026-05-20T22:06:50,610   writing top-level names to /tmp/pip-modern-metadata-2cqij0mh/vivarium_artifact.egg-info/top_level.txt
2026-05-20T22:06:50,611   writing manifest file '/tmp/pip-modern-metadata-2cqij0mh/vivarium_artifact.egg-info/SOURCES.txt'
2026-05-20T22:06:50,643   /tmp/pip-build-env-mbsdc28i/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly.
2026-05-20T22:06:50,643     return get_active_overrides().subprocess_timeout
2026-05-20T22:06:50,649   listing git files failed - pretending there aren't any
2026-05-20T22:06:50,654   reading manifest file '/tmp/pip-modern-metadata-2cqij0mh/vivarium_artifact.egg-info/SOURCES.txt'
2026-05-20T22:06:50,656   adding license file 'LICENSE'
2026-05-20T22:06:50,658   writing manifest file '/tmp/pip-modern-metadata-2cqij0mh/vivarium_artifact.egg-info/SOURCES.txt'
2026-05-20T22:06:50,659   creating '/tmp/pip-modern-metadata-2cqij0mh/vivarium_artifact-1.0.0.dist-info'
2026-05-20T22:06:50,790   Preparing metadata (pyproject.toml): finished with status 'done'
2026-05-20T22:06:50,795   Source in /tmp/pip-wheel-0f22a2_a/vivarium-artifact_ee3a184d3a2e4489bd10ae49ebf251af has version 1.0.0, which satisfies requirement vivarium-artifact==1.0.0 from https://files.pythonhosted.org/packages/c9/db/5b676fd35a5129eb2c1b144843f047a73eadceb3271475459890fd6c885e/vivarium_artifact-1.0.0.tar.gz
2026-05-20T22:06:50,796   Removed vivarium-artifact==1.0.0 from https://files.pythonhosted.org/packages/c9/db/5b676fd35a5129eb2c1b144843f047a73eadceb3271475459890fd6c885e/vivarium_artifact-1.0.0.tar.gz from build tracker '/tmp/pip-build-tracker-ym4l3cty'
2026-05-20T22:06:50,801 Created temporary directory: /tmp/pip-unpack-lid8asg0
2026-05-20T22:06:50,802 Building wheels for collected packages: vivarium-artifact
2026-05-20T22:06:50,806   Created temporary directory: /tmp/pip-wheel-5s8uo046
2026-05-20T22:06:50,806   Destination directory: /tmp/pip-wheel-5s8uo046
2026-05-20T22:06:50,808   Building wheel for vivarium-artifact (pyproject.toml): started
2026-05-20T22:06:50,809   Running command Building wheel for vivarium-artifact (pyproject.toml)
2026-05-20T22:06:51,453   /tmp/pip-build-env-mbsdc28i/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2026-05-20T22:06:51,453   !!

2026-05-20T22:06:51,455           ********************************************************************************
2026-05-20T22:06:51,455           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2026-05-20T22:06:51,457           By 2027-Feb-18, you need to update your project and remove deprecated calls
2026-05-20T22:06:51,457           or your builds will no longer be supported.

2026-05-20T22:06:51,458           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-05-20T22:06:51,459           ********************************************************************************

2026-05-20T22:06:51,460   !!
2026-05-20T22:06:51,461     corresp(dist, value, root_dir)
2026-05-20T22:06:51,526   running bdist_wheel
2026-05-20T22:06:51,551   running build
2026-05-20T22:06:51,551   running build_py
2026-05-20T22:06:51,553   creating build/lib/vivarium/artifact
2026-05-20T22:06:51,556   copying src/vivarium/artifact/hdf.py -> build/lib/vivarium/artifact
2026-05-20T22:06:51,559   copying src/vivarium/artifact/artifact.py -> build/lib/vivarium/artifact
2026-05-20T22:06:51,562   copying src/vivarium/artifact/__init__.py -> build/lib/vivarium/artifact
2026-05-20T22:06:51,563   running egg_info
2026-05-20T22:06:51,577   writing src/vivarium_artifact.egg-info/PKG-INFO
2026-05-20T22:06:51,581   writing dependency_links to src/vivarium_artifact.egg-info/dependency_links.txt
2026-05-20T22:06:51,584   writing requirements to src/vivarium_artifact.egg-info/requires.txt
2026-05-20T22:06:51,585   writing top-level names to src/vivarium_artifact.egg-info/top_level.txt
2026-05-20T22:06:51,611   /tmp/pip-build-env-mbsdc28i/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly.
2026-05-20T22:06:51,612     return get_active_overrides().subprocess_timeout
2026-05-20T22:06:51,618   listing git files failed - pretending there aren't any
2026-05-20T22:06:51,622   reading manifest file 'src/vivarium_artifact.egg-info/SOURCES.txt'
2026-05-20T22:06:51,626   adding license file 'LICENSE'
2026-05-20T22:06:51,629   writing manifest file 'src/vivarium_artifact.egg-info/SOURCES.txt'
2026-05-20T22:06:51,632   copying src/vivarium/artifact/py.typed -> build/lib/vivarium/artifact
2026-05-20T22:06:51,647   installing to build/bdist.linux-armv7l/wheel
2026-05-20T22:06:51,647   running install
2026-05-20T22:06:51,673   running install_lib
2026-05-20T22:06:51,681   creating build/bdist.linux-armv7l/wheel
2026-05-20T22:06:51,683   creating build/bdist.linux-armv7l/wheel/vivarium
2026-05-20T22:06:51,685   creating build/bdist.linux-armv7l/wheel/vivarium/artifact
2026-05-20T22:06:51,686   copying build/lib/vivarium/artifact/hdf.py -> build/bdist.linux-armv7l/wheel/./vivarium/artifact
2026-05-20T22:06:51,689   copying build/lib/vivarium/artifact/artifact.py -> build/bdist.linux-armv7l/wheel/./vivarium/artifact
2026-05-20T22:06:51,691   copying build/lib/vivarium/artifact/py.typed -> build/bdist.linux-armv7l/wheel/./vivarium/artifact
2026-05-20T22:06:51,693   copying build/lib/vivarium/artifact/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/artifact
2026-05-20T22:06:51,695   running install_egg_info
2026-05-20T22:06:51,703   Copying src/vivarium_artifact.egg-info to build/bdist.linux-armv7l/wheel/./vivarium_artifact-1.0.0-py3.11.egg-info
2026-05-20T22:06:51,713   running install_scripts
2026-05-20T22:06:51,723   creating build/bdist.linux-armv7l/wheel/vivarium_artifact-1.0.0.dist-info/WHEEL
2026-05-20T22:06:51,726   creating '/tmp/pip-wheel-5s8uo046/.tmp-htuj6m3o/vivarium_artifact-1.0.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2026-05-20T22:06:51,729   adding 'vivarium/artifact/__init__.py'
2026-05-20T22:06:51,732   adding 'vivarium/artifact/artifact.py'
2026-05-20T22:06:51,735   adding 'vivarium/artifact/hdf.py'
2026-05-20T22:06:51,736   adding 'vivarium/artifact/py.typed'
2026-05-20T22:06:51,740   adding 'vivarium_artifact-1.0.0.dist-info/licenses/LICENSE'
2026-05-20T22:06:51,742   adding 'vivarium_artifact-1.0.0.dist-info/METADATA'
2026-05-20T22:06:51,743   adding 'vivarium_artifact-1.0.0.dist-info/WHEEL'
2026-05-20T22:06:51,745   adding 'vivarium_artifact-1.0.0.dist-info/top_level.txt'
2026-05-20T22:06:51,746   adding 'vivarium_artifact-1.0.0.dist-info/RECORD'
2026-05-20T22:06:51,747   removing build/bdist.linux-armv7l/wheel
2026-05-20T22:06:51,856   Building wheel for vivarium-artifact (pyproject.toml): finished with status 'done'
2026-05-20T22:06:51,860   Created wheel for vivarium-artifact: filename=vivarium_artifact-1.0.0-py3-none-any.whl size=11172 sha256=80a81f9ab5524054a26d39c4c5f820dedc6923f66b05b1e1d5943742d791e8be
2026-05-20T22:06:51,862   Stored in directory: /tmp/pip-ephem-wheel-cache-6miede5t/wheels/e8/54/bd/49a87800f5de813f95d6bab686e0d0f5ab0412172f2cd65ea7
2026-05-20T22:06:51,871 Successfully built vivarium-artifact
2026-05-20T22:06:51,875 Removed build tracker: '/tmp/pip-build-tracker-ym4l3cty'