2026-05-21T03:34:53,665 Created temporary directory: /tmp/pip-ephem-wheel-cache-mjsrxr96 2026-05-21T03:34:53,667 Created temporary directory: /tmp/pip-build-tracker-5cfvtrhs 2026-05-21T03:34:53,668 Initialized build tracking at /tmp/pip-build-tracker-5cfvtrhs 2026-05-21T03:34:53,669 Created build tracker: /tmp/pip-build-tracker-5cfvtrhs 2026-05-21T03:34:53,669 Entered build tracker: /tmp/pip-build-tracker-5cfvtrhs 2026-05-21T03:34:53,670 Created temporary directory: /tmp/pip-wheel-ad2rsjpj 2026-05-21T03:34:53,673 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-05-21T03:34:53,675 Created temporary directory: /tmp/pip-ephem-wheel-cache-cs3cy87z 2026-05-21T03:34:53,698 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-05-21T03:34:53,701 2 location(s) to search for versions of skimgpt: 2026-05-21T03:34:53,701 * https://pypi.org/simple/skimgpt/ 2026-05-21T03:34:53,701 * https://www.piwheels.org/simple/skimgpt/ 2026-05-21T03:34:53,702 Fetching project page and analyzing links: https://pypi.org/simple/skimgpt/ 2026-05-21T03:34:53,703 Getting page https://pypi.org/simple/skimgpt/ 2026-05-21T03:34:53,704 Found index url https://pypi.org/simple 2026-05-21T03:34:53,934 Fetched page https://pypi.org/simple/skimgpt/ as application/vnd.pypi.simple.v1+json 2026-05-21T03:34:53,940 Skipping link: No binaries permitted for skimgpt: https://files.pythonhosted.org/packages/5b/e4/159fa6d31e797670c16a966f329e887553320fd41121ecbc37f1f42a927b/skimgpt-1.0.0-py3-none-any.whl (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-21T03:34:53,941 Found link https://files.pythonhosted.org/packages/4d/9e/f1e24804429e7da0e9280b116b97ba5810a130b52dd9ccecceadd6ccf55e/skimgpt-1.0.0.tar.gz (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10), version: 1.0.0 2026-05-21T03:34:53,942 Skipping link: No binaries permitted for skimgpt: https://files.pythonhosted.org/packages/7c/53/cc52c8549904b6c89d007f1068a31346c3e75f09cbbc90a8189e4f60f874/skimgpt-1.0.5-py3-none-any.whl (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-21T03:34:53,943 Found link https://files.pythonhosted.org/packages/38/40/2a659285343186f5bb160e4163f8f4e5b10687be47c4546ad4a8d3c6c16e/skimgpt-1.0.5.tar.gz (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10), version: 1.0.5 2026-05-21T03:34:53,944 Skipping link: No binaries permitted for skimgpt: https://files.pythonhosted.org/packages/ab/06/547b283132634bdd63656d313a025913d71ee5b1d612f3bfcc2d98331b99/skimgpt-1.0.6-py3-none-any.whl (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-21T03:34:53,945 Found link https://files.pythonhosted.org/packages/e4/49/56dc12f28a9a69bec4368adfa335368866c377cf787db7cff12019293df8/skimgpt-1.0.6.tar.gz (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10), version: 1.0.6 2026-05-21T03:34:53,946 Skipping link: No binaries permitted for skimgpt: https://files.pythonhosted.org/packages/36/a3/b40a6e16d6d7e25fcf2945fbc1c4d449933135d27a10f649b276f62ab304/skimgpt-1.1-py3-none-any.whl (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-21T03:34:53,947 Found link https://files.pythonhosted.org/packages/85/01/d401992a768ff3495f5e69595ef2fe1fd7f8c7dc5c3c433237cdafd0769e/skimgpt-1.1.tar.gz (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10), version: 1.1 2026-05-21T03:34:53,948 Skipping link: No binaries permitted for skimgpt: https://files.pythonhosted.org/packages/80/50/375197c9b2b61c37e2b8d8cd33499efdaaf60c1e0909dc5b8642ab27dfa8/skimgpt-1.2-py3-none-any.whl (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-21T03:34:53,949 Found link https://files.pythonhosted.org/packages/58/fb/fb5ef967d884a2fbf8328f2f83d016a56044c34950ab8b08e638fea90bec/skimgpt-1.2.tar.gz (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10), version: 1.2 2026-05-21T03:34:53,949 Skipping link: No binaries permitted for skimgpt: https://files.pythonhosted.org/packages/ce/3d/bcd1dfe57b3ee8c801068f70b93a0ec837f223c9ba58579fcf5e37f5f3e5/skimgpt-2.0.0-py3-none-any.whl (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-21T03:34:53,951 Found link https://files.pythonhosted.org/packages/42/85/156a9d7f9d57005e8bdee47a32d8a03e67c8945b2aa566f5fe69358a91b7/skimgpt-2.0.0.tar.gz (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10), version: 2.0.0 2026-05-21T03:34:53,951 Skipping link: No binaries permitted for skimgpt: https://files.pythonhosted.org/packages/65/51/2ba8c6987885f5fe0d82a0a1ab74c7fbd2dfb314b6cb3bb31925b08f1b8a/skimgpt-2.0.1-py3-none-any.whl (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-21T03:34:53,952 Found link https://files.pythonhosted.org/packages/ed/db/eacff4a9448c070b51b770a6c2f701fb1b2d837b0aea32ae7a08abe612f4/skimgpt-2.0.1.tar.gz (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10), version: 2.0.1 2026-05-21T03:34:53,953 Skipping link: No binaries permitted for skimgpt: https://files.pythonhosted.org/packages/1f/74/f03fc03f92872faaaae646a7a32cda4c689b4a898282ac67453e42b431d4/skimgpt-2.0.2-py3-none-any.whl (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-21T03:34:53,954 Found link https://files.pythonhosted.org/packages/ba/7a/a2a60fd5909477a7a2ea3f426c4fc018255de73507a1a00c5cf194dd5a70/skimgpt-2.0.2.tar.gz (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10), version: 2.0.2 2026-05-21T03:34:53,954 Skipping link: No binaries permitted for skimgpt: https://files.pythonhosted.org/packages/41/df/aa4d2bb2c2e59975ad7201c45e2ed0fd4b2a551ef9d26ef2a42712b8e6e3/skimgpt-2.0.3-py3-none-any.whl (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-21T03:34:53,955 Found link https://files.pythonhosted.org/packages/a7/64/d1b8e1d7ed026d6a18876525b616aa86575b8766ca6175b75b21793253a6/skimgpt-2.0.3.tar.gz (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10), version: 2.0.3 2026-05-21T03:34:53,956 Skipping link: No binaries permitted for skimgpt: https://files.pythonhosted.org/packages/80/9b/198730dbc0775a5254c44f95f64939dbadf4467f015097a1e65c61749cd9/skimgpt-2.0.4-py3-none-any.whl (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-21T03:34:53,957 Found link https://files.pythonhosted.org/packages/92/e6/e7cfaa38b3220939c47f97e527e1a65c146a4d5cfaf57b624139bc21b6d8/skimgpt-2.0.4.tar.gz (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10), version: 2.0.4 2026-05-21T03:34:53,958 Skipping link: No binaries permitted for skimgpt: https://files.pythonhosted.org/packages/24/9c/eaf0a2f1e9532c12faabb8ae9c74495ebff6032d220a19c4ed9f9febcbc5/skimgpt-2.0.5-py3-none-any.whl (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-21T03:34:53,959 Found link https://files.pythonhosted.org/packages/79/7f/fca67b82928bb54f827dd0e01918f2b7c99b9dcf8a1b1d2b754420205827/skimgpt-2.0.5.tar.gz (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10), version: 2.0.5 2026-05-21T03:34:53,960 Skipping link: No binaries permitted for skimgpt: https://files.pythonhosted.org/packages/03/9b/b56eb91b43814d983c85e06ebca70d5c31e0f7bc9cef4238a757cf293a61/skimgpt-2.0.6-py3-none-any.whl (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-21T03:34:53,960 Found link https://files.pythonhosted.org/packages/8f/09/bfac1b0466979521c6ae69c78d4e6afe01dc3f01a4eba5c47d5d67c3c43f/skimgpt-2.0.6.tar.gz (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10), version: 2.0.6 2026-05-21T03:34:53,961 Skipping link: No binaries permitted for skimgpt: https://files.pythonhosted.org/packages/61/b1/f5df8bcf6f17c2783b98c05c7f0cf7b942575412a22cf2e83e126130e81d/skimgpt-2.0.7-py3-none-any.whl (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-21T03:34:53,962 Found link https://files.pythonhosted.org/packages/6e/24/e69ef16dc0361afd09784ace918305a06f3bbd465724679a336d33a837ed/skimgpt-2.0.7.tar.gz (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10), version: 2.0.7 2026-05-21T03:34:53,963 Skipping link: No binaries permitted for skimgpt: https://files.pythonhosted.org/packages/5c/e4/fd7ed50d6b4aee928ab42f6e9ea4e8c8d7e39362ada86c59026b0057c5be/skimgpt-2.1-py3-none-any.whl (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-21T03:34:53,964 Found link https://files.pythonhosted.org/packages/41/06/f4bd1b81d7678d3fe7c66cb06b977a45e8b9be03354501ee99e3a9aa6b12/skimgpt-2.1.tar.gz (from https://pypi.org/simple/skimgpt/) (requires-python:>=3.10), version: 2.1 2026-05-21T03:34:53,965 Fetching project page and analyzing links: https://www.piwheels.org/simple/skimgpt/ 2026-05-21T03:34:53,965 Getting page https://www.piwheels.org/simple/skimgpt/ 2026-05-21T03:34:53,967 Found index url https://www.piwheels.org/simple 2026-05-21T03:34:57,259 Fetched page https://www.piwheels.org/simple/skimgpt/ as text/html 2026-05-21T03:34:57,268 Skipping link: No binaries permitted for skimgpt: https://archive1.piwheels.org/simple/skimgpt/skimgpt-2.1-py3-none-any.whl#sha256=95111b5d41f51f096d7581f210e2fcfab5b4956c22d52c6edc9342ddf4f886b8 (from https://www.piwheels.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-21T03:34:57,269 Skipping link: No binaries permitted for skimgpt: https://www.piwheels.org/simple/skimgpt/skimgpt-2.0.5-py3-none-any.whl#sha256=4aac87a0b6ffe80f3847fcb21fac11f432706a4643af8ec3173bc1153515be55 (from https://www.piwheels.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-21T03:34:57,270 Skipping link: No binaries permitted for skimgpt: https://www.piwheels.org/simple/skimgpt/skimgpt-2.0.4-py3-none-any.whl#sha256=49ada3639ddd4b9d224645d564d917fbc89f8c7c86d84fcf6772ee27a68c6df6 (from https://www.piwheels.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-21T03:34:57,271 Skipping link: No binaries permitted for skimgpt: https://www.piwheels.org/simple/skimgpt/skimgpt-2.0.3-py3-none-any.whl#sha256=96274a5d0db86ac16b3f8dbe36bf52ff08239c4faf4513285ac5bac8d5c3aeb0 (from https://www.piwheels.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-21T03:34:57,272 Skipping link: No binaries permitted for skimgpt: https://www.piwheels.org/simple/skimgpt/skimgpt-2.0.2-py3-none-any.whl#sha256=7bd216923629bb130dcd874dd9f1defd17de020c45835f04ecf09fffb5707595 (from https://www.piwheels.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-21T03:34:57,273 Skipping link: No binaries permitted for skimgpt: https://archive1.piwheels.org/simple/skimgpt/skimgpt-2.0.1-py3-none-any.whl#sha256=7facf52ed40df5f12628d4a87082df406a7a4d6d4547516d873870760e21790f (from https://www.piwheels.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-21T03:34:57,273 Skipping link: No binaries permitted for skimgpt: https://archive1.piwheels.org/simple/skimgpt/skimgpt-2.0.0-py3-none-any.whl#sha256=02e3c90f86cd6a5371cd622874f4f57fd3679d08cb1a2a1b5cf236552e9b003c (from https://www.piwheels.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-21T03:34:57,274 Skipping link: No binaries permitted for skimgpt: https://archive1.piwheels.org/simple/skimgpt/skimgpt-1.2-py3-none-any.whl#sha256=b4c4adbd30536892239d0d70fe47125b6e254968cae2cc74d10b71df90f3f55e (from https://www.piwheels.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-21T03:34:57,275 Skipping link: No binaries permitted for skimgpt: https://archive1.piwheels.org/simple/skimgpt/skimgpt-1.1-py3-none-any.whl#sha256=480c4ea401f7b080c2c4f06dbde341d6c4dba2629b04b574e64e4fe18979326b (from https://www.piwheels.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-21T03:34:57,276 Skipping link: No binaries permitted for skimgpt: https://archive1.piwheels.org/simple/skimgpt/skimgpt-1.0.6-py3-none-any.whl#sha256=a974ad27fdafa96f8e13df016211ba558c585668756dc22dc6bab39e6ad87f5c (from https://www.piwheels.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-21T03:34:57,277 Skipping link: No binaries permitted for skimgpt: https://archive1.piwheels.org/simple/skimgpt/skimgpt-1.0.5-py3-none-any.whl#sha256=4e4532d70e84030ef8e4886eadc21b1bec5f8478e56e5178ffe3e4b10d0e5872 (from https://www.piwheels.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-21T03:34:57,278 Skipping link: No binaries permitted for skimgpt: https://archive1.piwheels.org/simple/skimgpt/skimgpt-1.0.0-py3-none-any.whl#sha256=4d72bc94b7b7efab9758f02986de73ee8e6624597343dba106c538245c978553 (from https://www.piwheels.org/simple/skimgpt/) (requires-python:>=3.10) 2026-05-21T03:34:57,279 Skipping link: not a file: https://www.piwheels.org/simple/skimgpt/ 2026-05-21T03:34:57,280 Skipping link: not a file: https://pypi.org/simple/skimgpt/ 2026-05-21T03:34:57,325 Given no hashes to check 1 links for project 'skimgpt': discarding no candidates 2026-05-21T03:34:57,346 Collecting skimgpt==2.0.6 2026-05-21T03:34:57,348 Created temporary directory: /tmp/pip-unpack-w29xciks 2026-05-21T03:34:57,580 Downloading skimgpt-2.0.6.tar.gz (269 kB) 2026-05-21T03:34:57,900 Added skimgpt==2.0.6 from https://files.pythonhosted.org/packages/8f/09/bfac1b0466979521c6ae69c78d4e6afe01dc3f01a4eba5c47d5d67c3c43f/skimgpt-2.0.6.tar.gz to build tracker '/tmp/pip-build-tracker-5cfvtrhs' 2026-05-21T03:34:57,908 Created temporary directory: /tmp/pip-build-env-tul42coo 2026-05-21T03:34:57,913 Installing build dependencies: started 2026-05-21T03:34:57,914 Running command pip subprocess to install build dependencies 2026-05-21T03:34:59,049 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-05-21T03:34:59,514 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-05-21T03:34:59,537 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-05-21T03:35:05,572 WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLZeroReturnError(6, 'TLS/SSL connection has been closed (EOF) (_ssl.c:992)'))': /simple/setuptools/ 2026-05-21T03:35:11,328 Collecting setuptools>=45 2026-05-21T03:35:11,329 Obtaining dependency information for setuptools>=45 from https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl.metadata 2026-05-21T03:35:11,344 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl.metadata (6.5 kB) 2026-05-21T03:35:11,580 Collecting wheel 2026-05-21T03:35:11,581 Obtaining dependency information for wheel from https://www.piwheels.org/simple/wheel/wheel-0.47.0-py3-none-any.whl.metadata 2026-05-21T03:35:11,594 Using cached https://www.piwheels.org/simple/wheel/wheel-0.47.0-py3-none-any.whl.metadata (2.3 kB) 2026-05-21T03:35:11,939 Collecting setuptools_scm[toml]>=6.2 2026-05-21T03:35:11,940 Obtaining dependency information for setuptools_scm[toml]>=6.2 from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl.metadata 2026-05-21T03:35:11,953 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl.metadata (6.5 kB) 2026-05-21T03:35:11,964 Discarding https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl#sha256=600c37b3fea2bb517f59d76792adae856d0b5ce7735b186e4cde804375251321 (from https://www.piwheels.org/simple/setuptools-scm/) (requires-python:>=3.10): Requested setuptools_scm>=6.2 from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl#sha256=600c37b3fea2bb517f59d76792adae856d0b5ce7735b186e4cde804375251321 has inconsistent Name: expected 'setuptools_scm', but metadata has 'setuptools-scm' 2026-05-21T03:35:11,990 Using cached setuptools_scm-10.0.5-py3-none-any.whl (21 kB) 2026-05-21T03:35:12,175 Collecting packaging>=24.0 2026-05-21T03:35:12,176 Obtaining dependency information for packaging>=24.0 from https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata 2026-05-21T03:35:12,188 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata (3.5 kB) 2026-05-21T03:35:12,270 Collecting vcs-versioning>=1.0.0.dev0 2026-05-21T03:35:12,271 Obtaining dependency information for vcs-versioning>=1.0.0.dev0 from https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl.metadata 2026-05-21T03:35:12,285 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl.metadata (1.6 kB) 2026-05-21T03:35:12,528 Using cached https://www.piwheels.org/simple/wheel/wheel-0.47.0-py3-none-any.whl (32 kB) 2026-05-21T03:35:12,546 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB) 2026-05-21T03:35:12,566 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl (79 kB) 2026-05-21T03:35:12,650 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-05-21T03:35:12,689 Using cached https://www.piwheels.org/simple/wheel/wheel-0.47.0-py3-none-any.whl (32 kB) 2026-05-21T03:35:12,712 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB) 2026-05-21T03:35:12,739 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl (79 kB) 2026-05-21T03:35:12,837 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-05-21T03:35:15,622 Installing collected packages: setuptools, packaging, wheel, vcs-versioning, setuptools_scm 2026-05-21T03:35:19,205 Creating /tmp/pip-build-env-tul42coo/overlay/local/bin 2026-05-21T03:35:19,208 changing mode of /tmp/pip-build-env-tul42coo/overlay/local/bin/wheel to 755 2026-05-21T03:35:19,522 changing mode of /tmp/pip-build-env-tul42coo/overlay/local/bin/vcs-versioning to 755 2026-05-21T03:35:19,634 changing mode of /tmp/pip-build-env-tul42coo/overlay/local/bin/setuptools-scm to 755 2026-05-21T03:35:19,668 Successfully installed packaging-26.2 setuptools-82.0.1 setuptools_scm-10.0.5 vcs-versioning-1.1.1 wheel-0.47.0 2026-05-21T03:35:19,984 Installing build dependencies: finished with status 'done' 2026-05-21T03:35:19,991 Getting requirements to build wheel: started 2026-05-21T03:35:19,992 Running command Getting requirements to build wheel 2026-05-21T03:35:20,752 /tmp/pip-build-env-tul42coo/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-05-21T03:35:20,752 !! 2026-05-21T03:35:20,753 ******************************************************************************** 2026-05-21T03:35:20,754 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-05-21T03:35:20,755 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-05-21T03:35:20,755 or your builds will no longer be supported. 2026-05-21T03:35:20,757 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-21T03:35:20,757 ******************************************************************************** 2026-05-21T03:35:20,758 !! 2026-05-21T03:35:20,759 corresp(dist, value, root_dir) 2026-05-21T03:35:20,834 /tmp/pip-build-env-tul42coo/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-21T03:35:20,835 !! 2026-05-21T03:35:20,836 ******************************************************************************** 2026-05-21T03:35:20,837 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-21T03:35:20,838 License :: OSI Approved :: MIT License 2026-05-21T03:35:20,839 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-21T03:35:20,839 ******************************************************************************** 2026-05-21T03:35:20,840 !! 2026-05-21T03:35:20,841 dist._finalize_license_expression() 2026-05-21T03:35:20,843 /tmp/pip-build-env-tul42coo/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-21T03:35:20,843 !! 2026-05-21T03:35:20,844 ******************************************************************************** 2026-05-21T03:35:20,844 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-21T03:35:20,845 License :: OSI Approved :: MIT License 2026-05-21T03:35:20,846 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-21T03:35:20,847 ******************************************************************************** 2026-05-21T03:35:20,848 !! 2026-05-21T03:35:20,848 self._finalize_license_expression() 2026-05-21T03:35:20,855 running egg_info 2026-05-21T03:35:20,863 writing skimgpt.egg-info/PKG-INFO 2026-05-21T03:35:20,870 writing dependency_links to skimgpt.egg-info/dependency_links.txt 2026-05-21T03:35:20,873 writing entry points to skimgpt.egg-info/entry_points.txt 2026-05-21T03:35:20,876 writing requirements to skimgpt.egg-info/requires.txt 2026-05-21T03:35:20,878 writing top-level names to skimgpt.egg-info/top_level.txt 2026-05-21T03:35:20,927 /tmp/pip-build-env-tul42coo/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-05-21T03:35:20,927 return get_active_overrides().subprocess_timeout 2026-05-21T03:35:20,968 listing git files failed - pretending there aren't any 2026-05-21T03:35:20,974 reading manifest file 'skimgpt.egg-info/SOURCES.txt' 2026-05-21T03:35:20,981 reading manifest template 'MANIFEST.in' 2026-05-21T03:35:20,983 warning: no files found matching 'main.py' 2026-05-21T03:35:20,985 warning: no files found matching 'run_multiple_analyses.sh' 2026-05-21T03:35:20,986 warning: no files found matching '*.py' under directory 'src' 2026-05-21T03:35:20,987 warning: no files found matching '*.sh' under directory 'src' 2026-05-21T03:35:20,990 warning: no previously-included files found matching 'test/*' 2026-05-21T03:35:20,991 warning: no previously-included files found matching '.git*' 2026-05-21T03:35:20,992 warning: no previously-included files found matching '.pytest_cache' 2026-05-21T03:35:20,993 warning: no previously-included files found matching '__pycache__' 2026-05-21T03:35:20,994 warning: no previously-included files found matching '*.pyc' 2026-05-21T03:35:20,995 warning: no previously-included files found matching '.ipynb_checkpoints' 2026-05-21T03:35:21,000 writing manifest file 'skimgpt.egg-info/SOURCES.txt' 2026-05-21T03:35:21,106 Getting requirements to build wheel: finished with status 'done' 2026-05-21T03:35:21,110 Created temporary directory: /tmp/pip-modern-metadata-2mmx4fpn 2026-05-21T03:35:21,112 Preparing metadata (pyproject.toml): started 2026-05-21T03:35:21,114 Running command Preparing metadata (pyproject.toml) 2026-05-21T03:35:21,788 /tmp/pip-build-env-tul42coo/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-05-21T03:35:21,788 !! 2026-05-21T03:35:21,791 ******************************************************************************** 2026-05-21T03:35:21,792 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-05-21T03:35:21,793 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-05-21T03:35:21,793 or your builds will no longer be supported. 2026-05-21T03:35:21,794 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-21T03:35:21,794 ******************************************************************************** 2026-05-21T03:35:21,795 !! 2026-05-21T03:35:21,796 corresp(dist, value, root_dir) 2026-05-21T03:35:21,865 /tmp/pip-build-env-tul42coo/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-21T03:35:21,866 !! 2026-05-21T03:35:21,867 ******************************************************************************** 2026-05-21T03:35:21,867 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-21T03:35:21,868 License :: OSI Approved :: MIT License 2026-05-21T03:35:21,869 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-21T03:35:21,869 ******************************************************************************** 2026-05-21T03:35:21,870 !! 2026-05-21T03:35:21,871 dist._finalize_license_expression() 2026-05-21T03:35:21,874 /tmp/pip-build-env-tul42coo/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-21T03:35:21,875 !! 2026-05-21T03:35:21,876 ******************************************************************************** 2026-05-21T03:35:21,876 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-21T03:35:21,878 License :: OSI Approved :: MIT License 2026-05-21T03:35:21,879 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-21T03:35:21,880 ******************************************************************************** 2026-05-21T03:35:21,881 !! 2026-05-21T03:35:21,882 self._finalize_license_expression() 2026-05-21T03:35:21,887 running dist_info 2026-05-21T03:35:21,901 creating /tmp/pip-modern-metadata-2mmx4fpn/skimgpt.egg-info 2026-05-21T03:35:21,903 writing /tmp/pip-modern-metadata-2mmx4fpn/skimgpt.egg-info/PKG-INFO 2026-05-21T03:35:21,911 writing dependency_links to /tmp/pip-modern-metadata-2mmx4fpn/skimgpt.egg-info/dependency_links.txt 2026-05-21T03:35:21,913 writing entry points to /tmp/pip-modern-metadata-2mmx4fpn/skimgpt.egg-info/entry_points.txt 2026-05-21T03:35:21,917 writing requirements to /tmp/pip-modern-metadata-2mmx4fpn/skimgpt.egg-info/requires.txt 2026-05-21T03:35:21,918 writing top-level names to /tmp/pip-modern-metadata-2mmx4fpn/skimgpt.egg-info/top_level.txt 2026-05-21T03:35:21,920 writing manifest file '/tmp/pip-modern-metadata-2mmx4fpn/skimgpt.egg-info/SOURCES.txt' 2026-05-21T03:35:21,961 /tmp/pip-build-env-tul42coo/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-05-21T03:35:21,962 return get_active_overrides().subprocess_timeout 2026-05-21T03:35:21,969 listing git files failed - pretending there aren't any 2026-05-21T03:35:21,974 reading manifest file '/tmp/pip-modern-metadata-2mmx4fpn/skimgpt.egg-info/SOURCES.txt' 2026-05-21T03:35:21,977 reading manifest template 'MANIFEST.in' 2026-05-21T03:35:21,978 warning: no files found matching 'main.py' 2026-05-21T03:35:21,979 warning: no files found matching 'run_multiple_analyses.sh' 2026-05-21T03:35:21,980 warning: no files found matching '*.py' under directory 'src' 2026-05-21T03:35:21,981 warning: no files found matching '*.sh' under directory 'src' 2026-05-21T03:35:21,984 warning: no previously-included files found matching 'test/*' 2026-05-21T03:35:21,985 warning: no previously-included files found matching '.git*' 2026-05-21T03:35:21,986 warning: no previously-included files found matching '.pytest_cache' 2026-05-21T03:35:21,987 warning: no previously-included files found matching '__pycache__' 2026-05-21T03:35:21,988 warning: no previously-included files found matching '*.pyc' 2026-05-21T03:35:21,989 warning: no previously-included files found matching '.ipynb_checkpoints' 2026-05-21T03:35:21,994 writing manifest file '/tmp/pip-modern-metadata-2mmx4fpn/skimgpt.egg-info/SOURCES.txt' 2026-05-21T03:35:21,995 creating '/tmp/pip-modern-metadata-2mmx4fpn/skimgpt-2.0.6.dist-info' 2026-05-21T03:35:22,145 Preparing metadata (pyproject.toml): finished with status 'done' 2026-05-21T03:35:22,153 Source in /tmp/pip-wheel-ad2rsjpj/skimgpt_6684241234394c3693db29d97d0365c7 has version 2.0.6, which satisfies requirement skimgpt==2.0.6 from https://files.pythonhosted.org/packages/8f/09/bfac1b0466979521c6ae69c78d4e6afe01dc3f01a4eba5c47d5d67c3c43f/skimgpt-2.0.6.tar.gz 2026-05-21T03:35:22,154 Removed skimgpt==2.0.6 from https://files.pythonhosted.org/packages/8f/09/bfac1b0466979521c6ae69c78d4e6afe01dc3f01a4eba5c47d5d67c3c43f/skimgpt-2.0.6.tar.gz from build tracker '/tmp/pip-build-tracker-5cfvtrhs' 2026-05-21T03:35:22,162 Created temporary directory: /tmp/pip-unpack-s_h7e5x3 2026-05-21T03:35:22,163 Building wheels for collected packages: skimgpt 2026-05-21T03:35:22,168 Created temporary directory: /tmp/pip-wheel-yub9qqc4 2026-05-21T03:35:22,169 Destination directory: /tmp/pip-wheel-yub9qqc4 2026-05-21T03:35:22,171 Building wheel for skimgpt (pyproject.toml): started 2026-05-21T03:35:22,172 Running command Building wheel for skimgpt (pyproject.toml) 2026-05-21T03:35:22,824 /tmp/pip-build-env-tul42coo/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-05-21T03:35:22,824 !! 2026-05-21T03:35:22,825 ******************************************************************************** 2026-05-21T03:35:22,826 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-05-21T03:35:22,827 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-05-21T03:35:22,828 or your builds will no longer be supported. 2026-05-21T03:35:22,829 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-21T03:35:22,830 ******************************************************************************** 2026-05-21T03:35:22,831 !! 2026-05-21T03:35:22,831 corresp(dist, value, root_dir) 2026-05-21T03:35:22,898 /tmp/pip-build-env-tul42coo/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-21T03:35:22,899 !! 2026-05-21T03:35:22,900 ******************************************************************************** 2026-05-21T03:35:22,901 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-21T03:35:22,902 License :: OSI Approved :: MIT License 2026-05-21T03:35:22,903 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-21T03:35:22,904 ******************************************************************************** 2026-05-21T03:35:22,905 !! 2026-05-21T03:35:22,906 dist._finalize_license_expression() 2026-05-21T03:35:22,907 /tmp/pip-build-env-tul42coo/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-21T03:35:22,908 !! 2026-05-21T03:35:22,909 ******************************************************************************** 2026-05-21T03:35:22,909 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-21T03:35:22,910 License :: OSI Approved :: MIT License 2026-05-21T03:35:22,911 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-21T03:35:22,912 ******************************************************************************** 2026-05-21T03:35:22,913 !! 2026-05-21T03:35:22,913 self._finalize_license_expression() 2026-05-21T03:35:22,914 running bdist_wheel 2026-05-21T03:35:22,934 running build 2026-05-21T03:35:22,934 running build_py 2026-05-21T03:35:22,937 creating build/lib/skimgpt 2026-05-21T03:35:22,940 copying skimgpt/prompt_library.py -> build/lib/skimgpt 2026-05-21T03:35:22,943 copying skimgpt/retry.py -> build/lib/skimgpt 2026-05-21T03:35:22,946 copying skimgpt/pubmed_fetcher.py -> build/lib/skimgpt 2026-05-21T03:35:22,949 copying skimgpt/scoring_guidelines.py -> build/lib/skimgpt 2026-05-21T03:35:22,952 copying skimgpt/relevance_chtc.py -> build/lib/skimgpt 2026-05-21T03:35:22,955 copying skimgpt/utils.py -> build/lib/skimgpt 2026-05-21T03:35:22,958 copying skimgpt/skim_and_km_api.py -> build/lib/skimgpt 2026-05-21T03:35:22,961 copying skimgpt/cost_estimator.py -> build/lib/skimgpt 2026-05-21T03:35:22,964 copying skimgpt/triton_client.py -> build/lib/skimgpt 2026-05-21T03:35:22,967 copying skimgpt/eval_JSON_results.py -> build/lib/skimgpt 2026-05-21T03:35:22,969 copying skimgpt/main.py -> build/lib/skimgpt 2026-05-21T03:35:22,972 copying skimgpt/htcondor_helper.py -> build/lib/skimgpt 2026-05-21T03:35:22,975 copying skimgpt/classifier.py -> build/lib/skimgpt 2026-05-21T03:35:22,978 copying skimgpt/__init__.py -> build/lib/skimgpt 2026-05-21T03:35:22,981 copying skimgpt/relevance_triton.py -> build/lib/skimgpt 2026-05-21T03:35:22,984 copying skimgpt/relevance_helper.py -> build/lib/skimgpt 2026-05-21T03:35:22,988 creating build/lib/skimgpt/visualization 2026-05-21T03:35:22,989 copying skimgpt/visualization/hyp_stats.py -> build/lib/skimgpt/visualization 2026-05-21T03:35:22,993 copying skimgpt/visualization/plot_hyp_stats.py -> build/lib/skimgpt/visualization 2026-05-21T03:35:22,996 copying skimgpt/visualization/bayesian_ci.py -> build/lib/skimgpt/visualization 2026-05-21T03:35:22,999 copying skimgpt/visualization/plot_separate_runs.py -> build/lib/skimgpt/visualization 2026-05-21T03:35:23,001 copying skimgpt/visualization/__init__.py -> build/lib/skimgpt/visualization 2026-05-21T03:35:23,004 copying skimgpt/visualization/bayes_ci_violinplot.py -> build/lib/skimgpt/visualization 2026-05-21T03:35:23,006 running egg_info 2026-05-21T03:35:23,020 writing skimgpt.egg-info/PKG-INFO 2026-05-21T03:35:23,026 writing dependency_links to skimgpt.egg-info/dependency_links.txt 2026-05-21T03:35:23,028 writing entry points to skimgpt.egg-info/entry_points.txt 2026-05-21T03:35:23,032 writing requirements to skimgpt.egg-info/requires.txt 2026-05-21T03:35:23,033 writing top-level names to skimgpt.egg-info/top_level.txt 2026-05-21T03:35:23,069 /tmp/pip-build-env-tul42coo/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-05-21T03:35:23,070 return get_active_overrides().subprocess_timeout 2026-05-21T03:35:23,077 listing git files failed - pretending there aren't any 2026-05-21T03:35:23,082 reading manifest file 'skimgpt.egg-info/SOURCES.txt' 2026-05-21T03:35:23,088 reading manifest template 'MANIFEST.in' 2026-05-21T03:35:23,089 warning: no files found matching 'main.py' 2026-05-21T03:35:23,090 warning: no files found matching 'run_multiple_analyses.sh' 2026-05-21T03:35:23,091 warning: no files found matching '*.py' under directory 'src' 2026-05-21T03:35:23,092 warning: no files found matching '*.sh' under directory 'src' 2026-05-21T03:35:23,094 warning: no previously-included files found matching 'test/*' 2026-05-21T03:35:23,095 warning: no previously-included files found matching '.git*' 2026-05-21T03:35:23,096 warning: no previously-included files found matching '.pytest_cache' 2026-05-21T03:35:23,097 warning: no previously-included files found matching '__pycache__' 2026-05-21T03:35:23,098 warning: no previously-included files found matching '*.pyc' 2026-05-21T03:35:23,099 warning: no previously-included files found matching '.ipynb_checkpoints' 2026-05-21T03:35:23,105 writing manifest file 'skimgpt.egg-info/SOURCES.txt' 2026-05-21T03:35:23,108 /tmp/pip-build-env-tul42coo/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'skimgpt.visualization.example_data.CVD_HormonevsStatins' is absent from the `packages` configuration. 2026-05-21T03:35:23,109 !! 2026-05-21T03:35:23,110 ******************************************************************************** 2026-05-21T03:35:23,111 ############################ 2026-05-21T03:35:23,111 # Package would be ignored # 2026-05-21T03:35:23,112 ############################ 2026-05-21T03:35:23,112 Python recognizes 'skimgpt.visualization.example_data.CVD_HormonevsStatins' as an importable package[^1], 2026-05-21T03:35:23,113 but it is absent from setuptools' `packages` configuration. 2026-05-21T03:35:23,114 This leads to an ambiguous overall configuration. If you want to distribute this 2026-05-21T03:35:23,115 package, please make sure that 'skimgpt.visualization.example_data.CVD_HormonevsStatins' is explicitly added 2026-05-21T03:35:23,115 to the `packages` configuration field. 2026-05-21T03:35:23,117 Alternatively, you can also rely on setuptools' discovery methods 2026-05-21T03:35:23,117 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-05-21T03:35:23,118 instead of `find_packages(...)`/`find:`). 2026-05-21T03:35:23,119 You can read more about "package discovery" on setuptools documentation page: 2026-05-21T03:35:23,120 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-05-21T03:35:23,121 If you don't want 'skimgpt.visualization.example_data.CVD_HormonevsStatins' to be distributed and are 2026-05-21T03:35:23,122 already explicitly excluding 'skimgpt.visualization.example_data.CVD_HormonevsStatins' via 2026-05-21T03:35:23,122 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-05-21T03:35:23,123 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-05-21T03:35:23,123 combination with a more fine grained `package-data` configuration. 2026-05-21T03:35:23,124 You can read more about "package data files" on setuptools documentation page: 2026-05-21T03:35:23,125 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-05-21T03:35:23,127 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-05-21T03:35:23,128 even if it does not contain any `.py` files. 2026-05-21T03:35:23,128 On the other hand, currently there is no concept of package data 2026-05-21T03:35:23,129 directory, all directories are treated like packages. 2026-05-21T03:35:23,129 ******************************************************************************** 2026-05-21T03:35:23,130 !! 2026-05-21T03:35:23,131 check.warn(importable) 2026-05-21T03:35:23,132 /tmp/pip-build-env-tul42coo/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'skimgpt.visualization.example_data.autism_GPvsVaccine' is absent from the `packages` configuration. 2026-05-21T03:35:23,132 !! 2026-05-21T03:35:23,133 ******************************************************************************** 2026-05-21T03:35:23,134 ############################ 2026-05-21T03:35:23,134 # Package would be ignored # 2026-05-21T03:35:23,134 ############################ 2026-05-21T03:35:23,135 Python recognizes 'skimgpt.visualization.example_data.autism_GPvsVaccine' as an importable package[^1], 2026-05-21T03:35:23,135 but it is absent from setuptools' `packages` configuration. 2026-05-21T03:35:23,136 This leads to an ambiguous overall configuration. If you want to distribute this 2026-05-21T03:35:23,137 package, please make sure that 'skimgpt.visualization.example_data.autism_GPvsVaccine' is explicitly added 2026-05-21T03:35:23,137 to the `packages` configuration field. 2026-05-21T03:35:23,138 Alternatively, you can also rely on setuptools' discovery methods 2026-05-21T03:35:23,139 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-05-21T03:35:23,139 instead of `find_packages(...)`/`find:`). 2026-05-21T03:35:23,140 You can read more about "package discovery" on setuptools documentation page: 2026-05-21T03:35:23,141 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-05-21T03:35:23,142 If you don't want 'skimgpt.visualization.example_data.autism_GPvsVaccine' to be distributed and are 2026-05-21T03:35:23,143 already explicitly excluding 'skimgpt.visualization.example_data.autism_GPvsVaccine' via 2026-05-21T03:35:23,143 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-05-21T03:35:23,144 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-05-21T03:35:23,144 combination with a more fine grained `package-data` configuration. 2026-05-21T03:35:23,145 You can read more about "package data files" on setuptools documentation page: 2026-05-21T03:35:23,146 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-05-21T03:35:23,148 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-05-21T03:35:23,149 even if it does not contain any `.py` files. 2026-05-21T03:35:23,149 On the other hand, currently there is no concept of package data 2026-05-21T03:35:23,150 directory, all directories are treated like packages. 2026-05-21T03:35:23,151 ******************************************************************************** 2026-05-21T03:35:23,152 !! 2026-05-21T03:35:23,152 check.warn(importable) 2026-05-21T03:35:23,153 /tmp/pip-build-env-tul42coo/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'skimgpt.visualization.example_data.autism_microbiomeVsGP' is absent from the `packages` configuration. 2026-05-21T03:35:23,154 !! 2026-05-21T03:35:23,155 ******************************************************************************** 2026-05-21T03:35:23,155 ############################ 2026-05-21T03:35:23,156 # Package would be ignored # 2026-05-21T03:35:23,156 ############################ 2026-05-21T03:35:23,157 Python recognizes 'skimgpt.visualization.example_data.autism_microbiomeVsGP' as an importable package[^1], 2026-05-21T03:35:23,157 but it is absent from setuptools' `packages` configuration. 2026-05-21T03:35:23,159 This leads to an ambiguous overall configuration. If you want to distribute this 2026-05-21T03:35:23,159 package, please make sure that 'skimgpt.visualization.example_data.autism_microbiomeVsGP' is explicitly added 2026-05-21T03:35:23,160 to the `packages` configuration field. 2026-05-21T03:35:23,161 Alternatively, you can also rely on setuptools' discovery methods 2026-05-21T03:35:23,161 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-05-21T03:35:23,162 instead of `find_packages(...)`/`find:`). 2026-05-21T03:35:23,163 You can read more about "package discovery" on setuptools documentation page: 2026-05-21T03:35:23,164 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-05-21T03:35:23,165 If you don't want 'skimgpt.visualization.example_data.autism_microbiomeVsGP' to be distributed and are 2026-05-21T03:35:23,166 already explicitly excluding 'skimgpt.visualization.example_data.autism_microbiomeVsGP' via 2026-05-21T03:35:23,166 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-05-21T03:35:23,166 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-05-21T03:35:23,167 combination with a more fine grained `package-data` configuration. 2026-05-21T03:35:23,168 You can read more about "package data files" on setuptools documentation page: 2026-05-21T03:35:23,169 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-05-21T03:35:23,171 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-05-21T03:35:23,171 even if it does not contain any `.py` files. 2026-05-21T03:35:23,172 On the other hand, currently there is no concept of package data 2026-05-21T03:35:23,173 directory, all directories are treated like packages. 2026-05-21T03:35:23,173 ******************************************************************************** 2026-05-21T03:35:23,174 !! 2026-05-21T03:35:23,175 check.warn(importable) 2026-05-21T03:35:23,176 /tmp/pip-build-env-tul42coo/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'skimgpt.visualization.example_data.autism_microbiomevsVax' is absent from the `packages` configuration. 2026-05-21T03:35:23,177 !! 2026-05-21T03:35:23,178 ******************************************************************************** 2026-05-21T03:35:23,178 ############################ 2026-05-21T03:35:23,179 # Package would be ignored # 2026-05-21T03:35:23,179 ############################ 2026-05-21T03:35:23,181 Python recognizes 'skimgpt.visualization.example_data.autism_microbiomevsVax' as an importable package[^1], 2026-05-21T03:35:23,181 but it is absent from setuptools' `packages` configuration. 2026-05-21T03:35:23,182 This leads to an ambiguous overall configuration. If you want to distribute this 2026-05-21T03:35:23,183 package, please make sure that 'skimgpt.visualization.example_data.autism_microbiomevsVax' is explicitly added 2026-05-21T03:35:23,183 to the `packages` configuration field. 2026-05-21T03:35:23,184 Alternatively, you can also rely on setuptools' discovery methods 2026-05-21T03:35:23,185 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-05-21T03:35:23,185 instead of `find_packages(...)`/`find:`). 2026-05-21T03:35:23,186 You can read more about "package discovery" on setuptools documentation page: 2026-05-21T03:35:23,188 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-05-21T03:35:23,189 If you don't want 'skimgpt.visualization.example_data.autism_microbiomevsVax' to be distributed and are 2026-05-21T03:35:23,190 already explicitly excluding 'skimgpt.visualization.example_data.autism_microbiomevsVax' via 2026-05-21T03:35:23,190 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-05-21T03:35:23,191 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-05-21T03:35:23,191 combination with a more fine grained `package-data` configuration. 2026-05-21T03:35:23,192 You can read more about "package data files" on setuptools documentation page: 2026-05-21T03:35:23,193 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-05-21T03:35:23,195 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-05-21T03:35:23,195 even if it does not contain any `.py` files. 2026-05-21T03:35:23,196 On the other hand, currently there is no concept of package data 2026-05-21T03:35:23,197 directory, all directories are treated like packages. 2026-05-21T03:35:23,197 ******************************************************************************** 2026-05-21T03:35:23,198 !! 2026-05-21T03:35:23,199 check.warn(importable) 2026-05-21T03:35:23,199 /tmp/pip-build-env-tul42coo/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'skimgpt.visualization.example_data.cervical_cancer' is absent from the `packages` configuration. 2026-05-21T03:35:23,199 !! 2026-05-21T03:35:23,200 ******************************************************************************** 2026-05-21T03:35:23,201 ############################ 2026-05-21T03:35:23,201 # Package would be ignored # 2026-05-21T03:35:23,202 ############################ 2026-05-21T03:35:23,202 Python recognizes 'skimgpt.visualization.example_data.cervical_cancer' as an importable package[^1], 2026-05-21T03:35:23,203 but it is absent from setuptools' `packages` configuration. 2026-05-21T03:35:23,204 This leads to an ambiguous overall configuration. If you want to distribute this 2026-05-21T03:35:23,204 package, please make sure that 'skimgpt.visualization.example_data.cervical_cancer' is explicitly added 2026-05-21T03:35:23,205 to the `packages` configuration field. 2026-05-21T03:35:23,206 Alternatively, you can also rely on setuptools' discovery methods 2026-05-21T03:35:23,206 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-05-21T03:35:23,207 instead of `find_packages(...)`/`find:`). 2026-05-21T03:35:23,208 You can read more about "package discovery" on setuptools documentation page: 2026-05-21T03:35:23,209 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-05-21T03:35:23,210 If you don't want 'skimgpt.visualization.example_data.cervical_cancer' to be distributed and are 2026-05-21T03:35:23,211 already explicitly excluding 'skimgpt.visualization.example_data.cervical_cancer' via 2026-05-21T03:35:23,211 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-05-21T03:35:23,212 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-05-21T03:35:23,212 combination with a more fine grained `package-data` configuration. 2026-05-21T03:35:23,213 You can read more about "package data files" on setuptools documentation page: 2026-05-21T03:35:23,214 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-05-21T03:35:23,216 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-05-21T03:35:23,216 even if it does not contain any `.py` files. 2026-05-21T03:35:23,217 On the other hand, currently there is no concept of package data 2026-05-21T03:35:23,217 directory, all directories are treated like packages. 2026-05-21T03:35:23,218 ******************************************************************************** 2026-05-21T03:35:23,219 !! 2026-05-21T03:35:23,220 check.warn(importable) 2026-05-21T03:35:23,220 /tmp/pip-build-env-tul42coo/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'skimgpt.visualization.example_data.peptic_ulcer' is absent from the `packages` configuration. 2026-05-21T03:35:23,221 !! 2026-05-21T03:35:23,222 ******************************************************************************** 2026-05-21T03:35:23,222 ############################ 2026-05-21T03:35:23,223 # Package would be ignored # 2026-05-21T03:35:23,223 ############################ 2026-05-21T03:35:23,224 Python recognizes 'skimgpt.visualization.example_data.peptic_ulcer' as an importable package[^1], 2026-05-21T03:35:23,224 but it is absent from setuptools' `packages` configuration. 2026-05-21T03:35:23,225 This leads to an ambiguous overall configuration. If you want to distribute this 2026-05-21T03:35:23,226 package, please make sure that 'skimgpt.visualization.example_data.peptic_ulcer' is explicitly added 2026-05-21T03:35:23,226 to the `packages` configuration field. 2026-05-21T03:35:23,227 Alternatively, you can also rely on setuptools' discovery methods 2026-05-21T03:35:23,227 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-05-21T03:35:23,228 instead of `find_packages(...)`/`find:`). 2026-05-21T03:35:23,229 You can read more about "package discovery" on setuptools documentation page: 2026-05-21T03:35:23,230 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-05-21T03:35:23,231 If you don't want 'skimgpt.visualization.example_data.peptic_ulcer' to be distributed and are 2026-05-21T03:35:23,231 already explicitly excluding 'skimgpt.visualization.example_data.peptic_ulcer' via 2026-05-21T03:35:23,232 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-05-21T03:35:23,232 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-05-21T03:35:23,233 combination with a more fine grained `package-data` configuration. 2026-05-21T03:35:23,234 You can read more about "package data files" on setuptools documentation page: 2026-05-21T03:35:23,235 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-05-21T03:35:23,237 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-05-21T03:35:23,238 even if it does not contain any `.py` files. 2026-05-21T03:35:23,238 On the other hand, currently there is no concept of package data 2026-05-21T03:35:23,239 directory, all directories are treated like packages. 2026-05-21T03:35:23,240 ******************************************************************************** 2026-05-21T03:35:23,241 !! 2026-05-21T03:35:23,242 check.warn(importable) 2026-05-21T03:35:23,242 /tmp/pip-build-env-tul42coo/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'skimgpt.visualization.example_data.scrapie' is absent from the `packages` configuration. 2026-05-21T03:35:23,243 !! 2026-05-21T03:35:23,244 ******************************************************************************** 2026-05-21T03:35:23,245 ############################ 2026-05-21T03:35:23,245 # Package would be ignored # 2026-05-21T03:35:23,246 ############################ 2026-05-21T03:35:23,246 Python recognizes 'skimgpt.visualization.example_data.scrapie' as an importable package[^1], 2026-05-21T03:35:23,247 but it is absent from setuptools' `packages` configuration. 2026-05-21T03:35:23,248 This leads to an ambiguous overall configuration. If you want to distribute this 2026-05-21T03:35:23,249 package, please make sure that 'skimgpt.visualization.example_data.scrapie' is explicitly added 2026-05-21T03:35:23,249 to the `packages` configuration field. 2026-05-21T03:35:23,251 Alternatively, you can also rely on setuptools' discovery methods 2026-05-21T03:35:23,251 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-05-21T03:35:23,252 instead of `find_packages(...)`/`find:`). 2026-05-21T03:35:23,253 You can read more about "package discovery" on setuptools documentation page: 2026-05-21T03:35:23,254 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-05-21T03:35:23,255 If you don't want 'skimgpt.visualization.example_data.scrapie' to be distributed and are 2026-05-21T03:35:23,255 already explicitly excluding 'skimgpt.visualization.example_data.scrapie' via 2026-05-21T03:35:23,256 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-05-21T03:35:23,256 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-05-21T03:35:23,257 combination with a more fine grained `package-data` configuration. 2026-05-21T03:35:23,257 You can read more about "package data files" on setuptools documentation page: 2026-05-21T03:35:23,258 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-05-21T03:35:23,260 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-05-21T03:35:23,260 even if it does not contain any `.py` files. 2026-05-21T03:35:23,260 On the other hand, currently there is no concept of package data 2026-05-21T03:35:23,261 directory, all directories are treated like packages. 2026-05-21T03:35:23,261 ******************************************************************************** 2026-05-21T03:35:23,262 !! 2026-05-21T03:35:23,263 check.warn(importable) 2026-05-21T03:35:23,263 copying skimgpt/run.sh -> build/lib/skimgpt 2026-05-21T03:35:23,264 copying skimgpt/visualization/KM_Skim.yml -> build/lib/skimgpt/visualization 2026-05-21T03:35:23,264 copying skimgpt/visualization/bayes_ci_violinplot_commandLine.txt -> build/lib/skimgpt/visualization 2026-05-21T03:35:23,264 copying skimgpt/visualization/bayesian_ci_commandline.txt -> build/lib/skimgpt/visualization 2026-05-21T03:35:23,265 copying skimgpt/visualization/hyp_stats_commandline.txt -> build/lib/skimgpt/visualization 2026-05-21T03:35:23,266 copying skimgpt/visualization/plot_hyp_stats_commandline.txt -> build/lib/skimgpt/visualization 2026-05-21T03:35:23,266 copying skimgpt/visualization/plot_separate_runs_commandline.txt -> build/lib/skimgpt/visualization 2026-05-21T03:35:23,267 creating build/lib/skimgpt/visualization/example_data/CVD_HormonevsStatins 2026-05-21T03:35:23,267 copying skimgpt/visualization/example_data/CVD_HormonevsStatins/km_hyp_stats.txt -> build/lib/skimgpt/visualization/example_data/CVD_HormonevsStatins 2026-05-21T03:35:23,268 copying skimgpt/visualization/example_data/CVD_HormonevsStatins/km_kept.txt -> build/lib/skimgpt/visualization/example_data/CVD_HormonevsStatins 2026-05-21T03:35:23,269 creating build/lib/skimgpt/visualization/example_data/autism_GPvsVaccine 2026-05-21T03:35:23,269 copying skimgpt/visualization/example_data/autism_GPvsVaccine/km_hyp_stats.txt -> build/lib/skimgpt/visualization/example_data/autism_GPvsVaccine 2026-05-21T03:35:23,270 copying skimgpt/visualization/example_data/autism_GPvsVaccine/km_kept.txt -> build/lib/skimgpt/visualization/example_data/autism_GPvsVaccine 2026-05-21T03:35:23,270 creating build/lib/skimgpt/visualization/example_data/autism_microbiomeVsGP 2026-05-21T03:35:23,271 copying skimgpt/visualization/example_data/autism_microbiomeVsGP/km_hyp_stats.txt -> build/lib/skimgpt/visualization/example_data/autism_microbiomeVsGP 2026-05-21T03:35:23,271 copying skimgpt/visualization/example_data/autism_microbiomeVsGP/km_kept.txt -> build/lib/skimgpt/visualization/example_data/autism_microbiomeVsGP 2026-05-21T03:35:23,272 creating build/lib/skimgpt/visualization/example_data/autism_microbiomevsVax 2026-05-21T03:35:23,272 copying skimgpt/visualization/example_data/autism_microbiomevsVax/km_hyp_stats.txt -> build/lib/skimgpt/visualization/example_data/autism_microbiomevsVax 2026-05-21T03:35:23,273 copying skimgpt/visualization/example_data/autism_microbiomevsVax/km_kept.txt -> build/lib/skimgpt/visualization/example_data/autism_microbiomevsVax 2026-05-21T03:35:23,274 creating build/lib/skimgpt/visualization/example_data/cervical_cancer 2026-05-21T03:35:23,274 copying skimgpt/visualization/example_data/cervical_cancer/km_hyp_stats.txt -> build/lib/skimgpt/visualization/example_data/cervical_cancer 2026-05-21T03:35:23,275 copying skimgpt/visualization/example_data/cervical_cancer/km_kept.txt -> build/lib/skimgpt/visualization/example_data/cervical_cancer 2026-05-21T03:35:23,275 creating build/lib/skimgpt/visualization/example_data/peptic_ulcer 2026-05-21T03:35:23,276 copying skimgpt/visualization/example_data/peptic_ulcer/km_hyp_stats.txt -> build/lib/skimgpt/visualization/example_data/peptic_ulcer 2026-05-21T03:35:23,276 copying skimgpt/visualization/example_data/peptic_ulcer/km_kept.txt -> build/lib/skimgpt/visualization/example_data/peptic_ulcer 2026-05-21T03:35:23,276 creating build/lib/skimgpt/visualization/example_data/scrapie 2026-05-21T03:35:23,277 copying skimgpt/visualization/example_data/scrapie/km_hyp_stats.txt -> build/lib/skimgpt/visualization/example_data/scrapie 2026-05-21T03:35:23,277 copying skimgpt/visualization/example_data/scrapie/km_kept.txt -> build/lib/skimgpt/visualization/example_data/scrapie 2026-05-21T03:35:23,278 installing to build/bdist.linux-armv7l/wheel 2026-05-21T03:35:23,278 running install 2026-05-21T03:35:23,279 running install_lib 2026-05-21T03:35:23,286 creating build/bdist.linux-armv7l/wheel 2026-05-21T03:35:23,288 creating build/bdist.linux-armv7l/wheel/skimgpt 2026-05-21T03:35:23,289 copying build/lib/skimgpt/prompt_library.py -> build/bdist.linux-armv7l/wheel/./skimgpt 2026-05-21T03:35:23,292 copying build/lib/skimgpt/retry.py -> build/bdist.linux-armv7l/wheel/./skimgpt 2026-05-21T03:35:23,294 copying build/lib/skimgpt/pubmed_fetcher.py -> build/bdist.linux-armv7l/wheel/./skimgpt 2026-05-21T03:35:23,297 copying build/lib/skimgpt/scoring_guidelines.py -> build/bdist.linux-armv7l/wheel/./skimgpt 2026-05-21T03:35:23,300 creating build/bdist.linux-armv7l/wheel/skimgpt/visualization 2026-05-21T03:35:23,301 copying build/lib/skimgpt/visualization/plot_separate_runs_commandline.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization 2026-05-21T03:35:23,303 copying build/lib/skimgpt/visualization/hyp_stats_commandline.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization 2026-05-21T03:35:23,305 copying build/lib/skimgpt/visualization/plot_hyp_stats_commandline.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization 2026-05-21T03:35:23,308 creating build/bdist.linux-armv7l/wheel/skimgpt/visualization/example_data 2026-05-21T03:35:23,309 creating build/bdist.linux-armv7l/wheel/skimgpt/visualization/example_data/autism_microbiomevsVax 2026-05-21T03:35:23,311 copying build/lib/skimgpt/visualization/example_data/autism_microbiomevsVax/km_kept.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization/example_data/autism_microbiomevsVax 2026-05-21T03:35:23,314 copying build/lib/skimgpt/visualization/example_data/autism_microbiomevsVax/km_hyp_stats.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization/example_data/autism_microbiomevsVax 2026-05-21T03:35:23,317 creating build/bdist.linux-armv7l/wheel/skimgpt/visualization/example_data/CVD_HormonevsStatins 2026-05-21T03:35:23,318 copying build/lib/skimgpt/visualization/example_data/CVD_HormonevsStatins/km_kept.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization/example_data/CVD_HormonevsStatins 2026-05-21T03:35:23,321 copying build/lib/skimgpt/visualization/example_data/CVD_HormonevsStatins/km_hyp_stats.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization/example_data/CVD_HormonevsStatins 2026-05-21T03:35:23,324 creating build/bdist.linux-armv7l/wheel/skimgpt/visualization/example_data/scrapie 2026-05-21T03:35:23,325 copying build/lib/skimgpt/visualization/example_data/scrapie/km_kept.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization/example_data/scrapie 2026-05-21T03:35:23,329 copying build/lib/skimgpt/visualization/example_data/scrapie/km_hyp_stats.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization/example_data/scrapie 2026-05-21T03:35:23,333 creating build/bdist.linux-armv7l/wheel/skimgpt/visualization/example_data/autism_microbiomeVsGP 2026-05-21T03:35:23,334 copying build/lib/skimgpt/visualization/example_data/autism_microbiomeVsGP/km_kept.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization/example_data/autism_microbiomeVsGP 2026-05-21T03:35:23,337 copying build/lib/skimgpt/visualization/example_data/autism_microbiomeVsGP/km_hyp_stats.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization/example_data/autism_microbiomeVsGP 2026-05-21T03:35:23,340 creating build/bdist.linux-armv7l/wheel/skimgpt/visualization/example_data/autism_GPvsVaccine 2026-05-21T03:35:23,341 copying build/lib/skimgpt/visualization/example_data/autism_GPvsVaccine/km_kept.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization/example_data/autism_GPvsVaccine 2026-05-21T03:35:23,344 copying build/lib/skimgpt/visualization/example_data/autism_GPvsVaccine/km_hyp_stats.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization/example_data/autism_GPvsVaccine 2026-05-21T03:35:23,347 creating build/bdist.linux-armv7l/wheel/skimgpt/visualization/example_data/cervical_cancer 2026-05-21T03:35:23,348 copying build/lib/skimgpt/visualization/example_data/cervical_cancer/km_kept.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization/example_data/cervical_cancer 2026-05-21T03:35:23,352 copying build/lib/skimgpt/visualization/example_data/cervical_cancer/km_hyp_stats.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization/example_data/cervical_cancer 2026-05-21T03:35:23,356 creating build/bdist.linux-armv7l/wheel/skimgpt/visualization/example_data/peptic_ulcer 2026-05-21T03:35:23,357 copying build/lib/skimgpt/visualization/example_data/peptic_ulcer/km_kept.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization/example_data/peptic_ulcer 2026-05-21T03:35:23,361 copying build/lib/skimgpt/visualization/example_data/peptic_ulcer/km_hyp_stats.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization/example_data/peptic_ulcer 2026-05-21T03:35:23,364 copying build/lib/skimgpt/visualization/hyp_stats.py -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization 2026-05-21T03:35:23,366 copying build/lib/skimgpt/visualization/plot_hyp_stats.py -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization 2026-05-21T03:35:23,369 copying build/lib/skimgpt/visualization/bayesian_ci.py -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization 2026-05-21T03:35:23,372 copying build/lib/skimgpt/visualization/bayes_ci_violinplot_commandLine.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization 2026-05-21T03:35:23,374 copying build/lib/skimgpt/visualization/KM_Skim.yml -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization 2026-05-21T03:35:23,376 copying build/lib/skimgpt/visualization/plot_separate_runs.py -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization 2026-05-21T03:35:23,379 copying build/lib/skimgpt/visualization/__init__.py -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization 2026-05-21T03:35:23,381 copying build/lib/skimgpt/visualization/bayes_ci_violinplot.py -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization 2026-05-21T03:35:23,383 copying build/lib/skimgpt/visualization/bayesian_ci_commandline.txt -> build/bdist.linux-armv7l/wheel/./skimgpt/visualization 2026-05-21T03:35:23,385 copying build/lib/skimgpt/relevance_chtc.py -> build/bdist.linux-armv7l/wheel/./skimgpt 2026-05-21T03:35:23,388 copying build/lib/skimgpt/utils.py -> build/bdist.linux-armv7l/wheel/./skimgpt 2026-05-21T03:35:23,391 copying build/lib/skimgpt/skim_and_km_api.py -> build/bdist.linux-armv7l/wheel/./skimgpt 2026-05-21T03:35:23,393 copying build/lib/skimgpt/cost_estimator.py -> build/bdist.linux-armv7l/wheel/./skimgpt 2026-05-21T03:35:23,396 copying build/lib/skimgpt/triton_client.py -> build/bdist.linux-armv7l/wheel/./skimgpt 2026-05-21T03:35:23,399 copying build/lib/skimgpt/eval_JSON_results.py -> build/bdist.linux-armv7l/wheel/./skimgpt 2026-05-21T03:35:23,401 copying build/lib/skimgpt/main.py -> build/bdist.linux-armv7l/wheel/./skimgpt 2026-05-21T03:35:23,404 copying build/lib/skimgpt/run.sh -> build/bdist.linux-armv7l/wheel/./skimgpt 2026-05-21T03:35:23,406 copying build/lib/skimgpt/htcondor_helper.py -> build/bdist.linux-armv7l/wheel/./skimgpt 2026-05-21T03:35:23,408 copying build/lib/skimgpt/classifier.py -> build/bdist.linux-armv7l/wheel/./skimgpt 2026-05-21T03:35:23,411 copying build/lib/skimgpt/__init__.py -> build/bdist.linux-armv7l/wheel/./skimgpt 2026-05-21T03:35:23,413 copying build/lib/skimgpt/relevance_triton.py -> build/bdist.linux-armv7l/wheel/./skimgpt 2026-05-21T03:35:23,416 copying build/lib/skimgpt/relevance_helper.py -> build/bdist.linux-armv7l/wheel/./skimgpt 2026-05-21T03:35:23,418 running install_egg_info 2026-05-21T03:35:23,425 Copying skimgpt.egg-info to build/bdist.linux-armv7l/wheel/./skimgpt-2.0.6-py3.11.egg-info 2026-05-21T03:35:23,438 running install_scripts 2026-05-21T03:35:23,448 creating build/bdist.linux-armv7l/wheel/skimgpt-2.0.6.dist-info/WHEEL 2026-05-21T03:35:23,451 creating '/tmp/pip-wheel-yub9qqc4/.tmp-79a2l62v/skimgpt-2.0.6-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-05-21T03:35:23,453 adding 'skimgpt/__init__.py' 2026-05-21T03:35:23,457 adding 'skimgpt/classifier.py' 2026-05-21T03:35:23,459 adding 'skimgpt/cost_estimator.py' 2026-05-21T03:35:23,461 adding 'skimgpt/eval_JSON_results.py' 2026-05-21T03:35:23,463 adding 'skimgpt/htcondor_helper.py' 2026-05-21T03:35:23,465 adding 'skimgpt/main.py' 2026-05-21T03:35:23,470 adding 'skimgpt/prompt_library.py' 2026-05-21T03:35:23,473 adding 'skimgpt/pubmed_fetcher.py' 2026-05-21T03:35:23,475 adding 'skimgpt/relevance_chtc.py' 2026-05-21T03:35:23,479 adding 'skimgpt/relevance_helper.py' 2026-05-21T03:35:23,481 adding 'skimgpt/relevance_triton.py' 2026-05-21T03:35:23,482 adding 'skimgpt/retry.py' 2026-05-21T03:35:23,484 adding 'skimgpt/run.sh' 2026-05-21T03:35:23,486 adding 'skimgpt/scoring_guidelines.py' 2026-05-21T03:35:23,488 adding 'skimgpt/skim_and_km_api.py' 2026-05-21T03:35:23,490 adding 'skimgpt/triton_client.py' 2026-05-21T03:35:23,494 adding 'skimgpt/utils.py' 2026-05-21T03:35:23,497 adding 'skimgpt/visualization/KM_Skim.yml' 2026-05-21T03:35:23,498 adding 'skimgpt/visualization/__init__.py' 2026-05-21T03:35:23,501 adding 'skimgpt/visualization/bayes_ci_violinplot.py' 2026-05-21T03:35:23,502 adding 'skimgpt/visualization/bayes_ci_violinplot_commandLine.txt' 2026-05-21T03:35:23,504 adding 'skimgpt/visualization/bayesian_ci.py' 2026-05-21T03:35:23,505 adding 'skimgpt/visualization/bayesian_ci_commandline.txt' 2026-05-21T03:35:23,509 adding 'skimgpt/visualization/hyp_stats.py' 2026-05-21T03:35:23,511 adding 'skimgpt/visualization/hyp_stats_commandline.txt' 2026-05-21T03:35:23,513 adding 'skimgpt/visualization/plot_hyp_stats.py' 2026-05-21T03:35:23,514 adding 'skimgpt/visualization/plot_hyp_stats_commandline.txt' 2026-05-21T03:35:23,516 adding 'skimgpt/visualization/plot_separate_runs.py' 2026-05-21T03:35:23,517 adding 'skimgpt/visualization/plot_separate_runs_commandline.txt' 2026-05-21T03:35:23,520 adding 'skimgpt/visualization/example_data/CVD_HormonevsStatins/km_hyp_stats.txt' 2026-05-21T03:35:23,523 adding 'skimgpt/visualization/example_data/CVD_HormonevsStatins/km_kept.txt' 2026-05-21T03:35:23,526 adding 'skimgpt/visualization/example_data/autism_GPvsVaccine/km_hyp_stats.txt' 2026-05-21T03:35:23,530 adding 'skimgpt/visualization/example_data/autism_GPvsVaccine/km_kept.txt' 2026-05-21T03:35:23,533 adding 'skimgpt/visualization/example_data/autism_microbiomeVsGP/km_hyp_stats.txt' 2026-05-21T03:35:23,536 adding 'skimgpt/visualization/example_data/autism_microbiomeVsGP/km_kept.txt' 2026-05-21T03:35:23,538 adding 'skimgpt/visualization/example_data/autism_microbiomevsVax/km_hyp_stats.txt' 2026-05-21T03:35:23,542 adding 'skimgpt/visualization/example_data/autism_microbiomevsVax/km_kept.txt' 2026-05-21T03:35:23,546 adding 'skimgpt/visualization/example_data/cervical_cancer/km_hyp_stats.txt' 2026-05-21T03:35:23,553 adding 'skimgpt/visualization/example_data/cervical_cancer/km_kept.txt' 2026-05-21T03:35:23,556 adding 'skimgpt/visualization/example_data/peptic_ulcer/km_hyp_stats.txt' 2026-05-21T03:35:23,560 adding 'skimgpt/visualization/example_data/peptic_ulcer/km_kept.txt' 2026-05-21T03:35:23,564 adding 'skimgpt/visualization/example_data/scrapie/km_hyp_stats.txt' 2026-05-21T03:35:23,567 adding 'skimgpt/visualization/example_data/scrapie/km_kept.txt' 2026-05-21T03:35:23,571 adding 'skimgpt-2.0.6.dist-info/METADATA' 2026-05-21T03:35:23,573 adding 'skimgpt-2.0.6.dist-info/WHEEL' 2026-05-21T03:35:23,574 adding 'skimgpt-2.0.6.dist-info/entry_points.txt' 2026-05-21T03:35:23,575 adding 'skimgpt-2.0.6.dist-info/top_level.txt' 2026-05-21T03:35:23,577 adding 'skimgpt-2.0.6.dist-info/RECORD' 2026-05-21T03:35:23,581 removing build/bdist.linux-armv7l/wheel 2026-05-21T03:35:23,722 Building wheel for skimgpt (pyproject.toml): finished with status 'done' 2026-05-21T03:35:23,730 Created wheel for skimgpt: filename=skimgpt-2.0.6-py3-none-any.whl size=195891 sha256=e8da695d22ade5cff6efb4da711e29c2f04209ac0889952508f89de5ead1baed 2026-05-21T03:35:23,731 Stored in directory: /tmp/pip-ephem-wheel-cache-cs3cy87z/wheels/1e/09/40/7c7b061de3c97cc2e0a3a9d90b16a1b88fa9e8e320f1660eb5 2026-05-21T03:35:23,746 Successfully built skimgpt 2026-05-21T03:35:23,754 Removed build tracker: '/tmp/pip-build-tracker-5cfvtrhs'