2026-05-30T00:02:14,287 Created temporary directory: /tmp/pip-ephem-wheel-cache-y405atij 2026-05-30T00:02:14,289 Created temporary directory: /tmp/pip-build-tracker-4ebmha4b 2026-05-30T00:02:14,290 Initialized build tracking at /tmp/pip-build-tracker-4ebmha4b 2026-05-30T00:02:14,290 Created build tracker: /tmp/pip-build-tracker-4ebmha4b 2026-05-30T00:02:14,291 Entered build tracker: /tmp/pip-build-tracker-4ebmha4b 2026-05-30T00:02:14,292 Created temporary directory: /tmp/pip-wheel-dmg67bcz 2026-05-30T00:02:14,295 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-05-30T00:02:14,297 Created temporary directory: /tmp/pip-ephem-wheel-cache-ej_izpv5 2026-05-30T00:02:14,320 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-05-30T00:02:14,324 2 location(s) to search for versions of vivarium-engine: 2026-05-30T00:02:14,324 * https://pypi.org/simple/vivarium-engine/ 2026-05-30T00:02:14,324 * https://www.piwheels.org/simple/vivarium-engine/ 2026-05-30T00:02:14,325 Fetching project page and analyzing links: https://pypi.org/simple/vivarium-engine/ 2026-05-30T00:02:14,326 Getting page https://pypi.org/simple/vivarium-engine/ 2026-05-30T00:02:14,327 Found index url https://pypi.org/simple 2026-05-30T00:02:14,554 Fetched page https://pypi.org/simple/vivarium-engine/ as application/vnd.pypi.simple.v1+json 2026-05-30T00:02:14,556 Skipping link: No binaries permitted for vivarium-engine: https://files.pythonhosted.org/packages/f5/9b/0d5cb8e052b7a5e87054378ea60d3e22621ad35e5fc58ca649cd1e0afee1/vivarium_engine-5.0.0-py3-none-any.whl (from https://pypi.org/simple/vivarium-engine/) (requires-python:>=3.10) 2026-05-30T00:02:14,557 Found link https://files.pythonhosted.org/packages/fb/00/8eeaae4ba6ffcebc9ab23acbb50132b73221e138342e491942bc79aaa9e9/vivarium_engine-5.0.0.tar.gz (from https://pypi.org/simple/vivarium-engine/) (requires-python:>=3.10), version: 5.0.0 2026-05-30T00:02:14,558 Skipping link: No binaries permitted for vivarium-engine: https://files.pythonhosted.org/packages/e1/4b/00ab98164578a39691dbf0e58b0b24ebfac015f45aca7e72d3d1d7145752/vivarium_engine-5.0.1-py3-none-any.whl (from https://pypi.org/simple/vivarium-engine/) (requires-python:>=3.10) 2026-05-30T00:02:14,559 Found link https://files.pythonhosted.org/packages/1f/b4/06f4bb062c61aadfc7998964d0c16456d2cdbfa5db71cb6724cf2e4edcb9/vivarium_engine-5.0.1.tar.gz (from https://pypi.org/simple/vivarium-engine/) (requires-python:>=3.10), version: 5.0.1 2026-05-30T00:02:14,560 Fetching project page and analyzing links: https://www.piwheels.org/simple/vivarium-engine/ 2026-05-30T00:02:14,560 Getting page https://www.piwheels.org/simple/vivarium-engine/ 2026-05-30T00:02:14,562 Found index url https://www.piwheels.org/simple 2026-05-30T00:02:14,734 Fetched page https://www.piwheels.org/simple/vivarium-engine/ as text/html 2026-05-30T00:02:14,735 Skipping link: No binaries permitted for vivarium-engine: https://www.piwheels.org/simple/vivarium-engine/vivarium_engine-5.0.0-py3-none-any.whl#sha256=3ba1d9a3efd6e4f7ed6c9c10c47d29d342a10c8ad836b378138d4e336eec0d0c (from https://www.piwheels.org/simple/vivarium-engine/) (requires-python:>=3.10) 2026-05-30T00:02:14,736 Skipping link: not a file: https://www.piwheels.org/simple/vivarium-engine/ 2026-05-30T00:02:14,737 Skipping link: not a file: https://pypi.org/simple/vivarium-engine/ 2026-05-30T00:02:14,758 Given no hashes to check 1 links for project 'vivarium-engine': discarding no candidates 2026-05-30T00:02:14,777 Collecting vivarium-engine==5.0.1 2026-05-30T00:02:14,780 Created temporary directory: /tmp/pip-unpack-h08go48a 2026-05-30T00:02:15,012 Downloading vivarium_engine-5.0.1.tar.gz (7.2 MB) 2026-05-30T00:02:16,608 Added vivarium-engine==5.0.1 from https://files.pythonhosted.org/packages/1f/b4/06f4bb062c61aadfc7998964d0c16456d2cdbfa5db71cb6724cf2e4edcb9/vivarium_engine-5.0.1.tar.gz to build tracker '/tmp/pip-build-tracker-4ebmha4b' 2026-05-30T00:02:16,616 Created temporary directory: /tmp/pip-build-env-q98thwhs 2026-05-30T00:02:16,621 Installing build dependencies: started 2026-05-30T00:02:16,622 Running command pip subprocess to install build dependencies 2026-05-30T00:02:17,787 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-05-30T00:02:18,259 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-05-30T00:02:18,282 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-05-30T00:02:20,105 Collecting setuptools>=61.0 2026-05-30T00:02:20,106 Obtaining dependency information for setuptools>=61.0 from https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl.metadata 2026-05-30T00:02:20,122 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl.metadata (6.5 kB) 2026-05-30T00:02:20,466 Collecting setuptools_scm[toml]>=8.0 2026-05-30T00:02:20,468 Obtaining dependency information for setuptools_scm[toml]>=8.0 from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl.metadata 2026-05-30T00:02:20,485 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl.metadata (6.5 kB) 2026-05-30T00:02:20,496 Discarding https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl#sha256=600c37b3fea2bb517f59d76792adae856d0b5ce7735b186e4cde804375251321 (from https://www.piwheels.org/simple/setuptools-scm/) (requires-python:>=3.10): Requested setuptools_scm>=8.0 from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl#sha256=600c37b3fea2bb517f59d76792adae856d0b5ce7735b186e4cde804375251321 has inconsistent Name: expected 'setuptools_scm', but metadata has 'setuptools-scm' 2026-05-30T00:02:20,521 Using cached setuptools_scm-10.0.5-py3-none-any.whl (21 kB) 2026-05-30T00:02:20,607 Collecting vcs-versioning>=1.0.0.dev0 2026-05-30T00:02:20,609 Obtaining dependency information for vcs-versioning>=1.0.0.dev0 from https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl.metadata 2026-05-30T00:02:20,623 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl.metadata (1.6 kB) 2026-05-30T00:02:20,809 Collecting packaging>=20 2026-05-30T00:02:20,810 Obtaining dependency information for packaging>=20 from https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata 2026-05-30T00:02:20,825 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata (3.5 kB) 2026-05-30T00:02:21,048 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB) 2026-05-30T00:02:21,075 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl (79 kB) 2026-05-30T00:02:21,175 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-05-30T00:02:21,210 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB) 2026-05-30T00:02:21,236 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl (79 kB) 2026-05-30T00:02:21,329 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-05-30T00:02:24,080 Installing collected packages: setuptools, packaging, vcs-versioning, setuptools_scm 2026-05-30T00:02:27,729 Creating /tmp/pip-build-env-q98thwhs/overlay/local/bin 2026-05-30T00:02:27,731 changing mode of /tmp/pip-build-env-q98thwhs/overlay/local/bin/vcs-versioning to 755 2026-05-30T00:02:27,843 changing mode of /tmp/pip-build-env-q98thwhs/overlay/local/bin/setuptools-scm to 755 2026-05-30T00:02:27,869 Successfully installed packaging-26.2 setuptools-82.0.1 setuptools_scm-10.0.5 vcs-versioning-1.1.1 2026-05-30T00:02:28,165 Installing build dependencies: finished with status 'done' 2026-05-30T00:02:28,172 Getting requirements to build wheel: started 2026-05-30T00:02:28,173 Running command Getting requirements to build wheel 2026-05-30T00:02:28,895 /tmp/pip-build-env-q98thwhs/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-05-30T00:02:28,895 !! 2026-05-30T00:02:28,896 ******************************************************************************** 2026-05-30T00:02:28,896 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-05-30T00:02:28,897 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-05-30T00:02:28,898 or your builds will no longer be supported. 2026-05-30T00:02:28,899 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-30T00:02:28,899 ******************************************************************************** 2026-05-30T00:02:28,900 !! 2026-05-30T00:02:28,901 corresp(dist, value, root_dir) 2026-05-30T00:02:28,971 /tmp/pip-build-env-q98thwhs/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-30T00:02:28,972 !! 2026-05-30T00:02:28,973 ******************************************************************************** 2026-05-30T00:02:28,974 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-30T00:02:28,975 License :: OSI Approved :: BSD License 2026-05-30T00:02:28,976 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-30T00:02:28,977 ******************************************************************************** 2026-05-30T00:02:28,978 !! 2026-05-30T00:02:28,979 dist._finalize_license_expression() 2026-05-30T00:02:28,979 /tmp/pip-build-env-q98thwhs/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-30T00:02:28,980 !! 2026-05-30T00:02:28,981 ******************************************************************************** 2026-05-30T00:02:28,982 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-30T00:02:28,983 License :: OSI Approved :: BSD License 2026-05-30T00:02:28,984 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-30T00:02:28,984 ******************************************************************************** 2026-05-30T00:02:28,986 !! 2026-05-30T00:02:28,986 self._finalize_license_expression() 2026-05-30T00:02:28,987 running egg_info 2026-05-30T00:02:28,993 writing src/vivarium_engine.egg-info/PKG-INFO 2026-05-30T00:02:28,998 writing dependency_links to src/vivarium_engine.egg-info/dependency_links.txt 2026-05-30T00:02:29,000 writing entry points to src/vivarium_engine.egg-info/entry_points.txt 2026-05-30T00:02:29,004 writing requirements to src/vivarium_engine.egg-info/requires.txt 2026-05-30T00:02:29,005 writing top-level names to src/vivarium_engine.egg-info/top_level.txt 2026-05-30T00:02:29,061 /tmp/pip-build-env-q98thwhs/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-05-30T00:02:29,062 return get_active_overrides().subprocess_timeout 2026-05-30T00:02:29,069 listing git files failed - pretending there aren't any 2026-05-30T00:02:29,074 reading manifest file 'src/vivarium_engine.egg-info/SOURCES.txt' 2026-05-30T00:02:29,114 adding license file 'LICENSE' 2026-05-30T00:02:29,126 writing manifest file 'src/vivarium_engine.egg-info/SOURCES.txt' 2026-05-30T00:02:29,233 Getting requirements to build wheel: finished with status 'done' 2026-05-30T00:02:29,236 Created temporary directory: /tmp/pip-modern-metadata-qjgim1p8 2026-05-30T00:02:29,239 Preparing metadata (pyproject.toml): started 2026-05-30T00:02:29,240 Running command Preparing metadata (pyproject.toml) 2026-05-30T00:02:29,904 /tmp/pip-build-env-q98thwhs/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-05-30T00:02:29,905 !! 2026-05-30T00:02:29,906 ******************************************************************************** 2026-05-30T00:02:29,906 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-05-30T00:02:29,907 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-05-30T00:02:29,908 or your builds will no longer be supported. 2026-05-30T00:02:29,909 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-30T00:02:29,909 ******************************************************************************** 2026-05-30T00:02:29,910 !! 2026-05-30T00:02:29,911 corresp(dist, value, root_dir) 2026-05-30T00:02:29,978 /tmp/pip-build-env-q98thwhs/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-30T00:02:29,979 !! 2026-05-30T00:02:29,980 ******************************************************************************** 2026-05-30T00:02:29,980 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-30T00:02:29,981 License :: OSI Approved :: BSD License 2026-05-30T00:02:29,983 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-30T00:02:29,983 ******************************************************************************** 2026-05-30T00:02:29,985 !! 2026-05-30T00:02:29,985 dist._finalize_license_expression() 2026-05-30T00:02:29,986 /tmp/pip-build-env-q98thwhs/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-30T00:02:29,986 !! 2026-05-30T00:02:29,988 ******************************************************************************** 2026-05-30T00:02:29,988 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-30T00:02:29,989 License :: OSI Approved :: BSD License 2026-05-30T00:02:29,991 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-30T00:02:29,991 ******************************************************************************** 2026-05-30T00:02:29,992 !! 2026-05-30T00:02:29,993 self._finalize_license_expression() 2026-05-30T00:02:29,996 running dist_info 2026-05-30T00:02:30,009 creating /tmp/pip-modern-metadata-qjgim1p8/vivarium_engine.egg-info 2026-05-30T00:02:30,010 writing /tmp/pip-modern-metadata-qjgim1p8/vivarium_engine.egg-info/PKG-INFO 2026-05-30T00:02:30,017 writing dependency_links to /tmp/pip-modern-metadata-qjgim1p8/vivarium_engine.egg-info/dependency_links.txt 2026-05-30T00:02:30,019 writing entry points to /tmp/pip-modern-metadata-qjgim1p8/vivarium_engine.egg-info/entry_points.txt 2026-05-30T00:02:30,022 writing requirements to /tmp/pip-modern-metadata-qjgim1p8/vivarium_engine.egg-info/requires.txt 2026-05-30T00:02:30,023 writing top-level names to /tmp/pip-modern-metadata-qjgim1p8/vivarium_engine.egg-info/top_level.txt 2026-05-30T00:02:30,025 writing manifest file '/tmp/pip-modern-metadata-qjgim1p8/vivarium_engine.egg-info/SOURCES.txt' 2026-05-30T00:02:30,076 /tmp/pip-build-env-q98thwhs/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-05-30T00:02:30,076 return get_active_overrides().subprocess_timeout 2026-05-30T00:02:30,083 listing git files failed - pretending there aren't any 2026-05-30T00:02:30,088 reading manifest file '/tmp/pip-modern-metadata-qjgim1p8/vivarium_engine.egg-info/SOURCES.txt' 2026-05-30T00:02:30,090 adding license file 'LICENSE' 2026-05-30T00:02:30,095 writing manifest file '/tmp/pip-modern-metadata-qjgim1p8/vivarium_engine.egg-info/SOURCES.txt' 2026-05-30T00:02:30,096 creating '/tmp/pip-modern-metadata-qjgim1p8/vivarium_engine-5.0.1.dist-info' 2026-05-30T00:02:30,232 Preparing metadata (pyproject.toml): finished with status 'done' 2026-05-30T00:02:30,237 Source in /tmp/pip-wheel-dmg67bcz/vivarium-engine_39b7aa9e1b9f4be3a0a842ca97ae0ce7 has version 5.0.1, which satisfies requirement vivarium-engine==5.0.1 from https://files.pythonhosted.org/packages/1f/b4/06f4bb062c61aadfc7998964d0c16456d2cdbfa5db71cb6724cf2e4edcb9/vivarium_engine-5.0.1.tar.gz 2026-05-30T00:02:30,238 Removed vivarium-engine==5.0.1 from https://files.pythonhosted.org/packages/1f/b4/06f4bb062c61aadfc7998964d0c16456d2cdbfa5db71cb6724cf2e4edcb9/vivarium_engine-5.0.1.tar.gz from build tracker '/tmp/pip-build-tracker-4ebmha4b' 2026-05-30T00:02:30,245 Created temporary directory: /tmp/pip-unpack-p3jdjv7d 2026-05-30T00:02:30,245 Building wheels for collected packages: vivarium-engine 2026-05-30T00:02:30,250 Created temporary directory: /tmp/pip-wheel-jkrni3nc 2026-05-30T00:02:30,251 Destination directory: /tmp/pip-wheel-jkrni3nc 2026-05-30T00:02:30,253 Building wheel for vivarium-engine (pyproject.toml): started 2026-05-30T00:02:30,254 Running command Building wheel for vivarium-engine (pyproject.toml) 2026-05-30T00:02:30,939 /tmp/pip-build-env-q98thwhs/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-05-30T00:02:30,940 !! 2026-05-30T00:02:30,941 ******************************************************************************** 2026-05-30T00:02:30,941 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-05-30T00:02:30,943 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-05-30T00:02:30,943 or your builds will no longer be supported. 2026-05-30T00:02:30,944 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-30T00:02:30,945 ******************************************************************************** 2026-05-30T00:02:30,946 !! 2026-05-30T00:02:30,947 corresp(dist, value, root_dir) 2026-05-30T00:02:31,005 /tmp/pip-build-env-q98thwhs/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-30T00:02:31,005 !! 2026-05-30T00:02:31,007 ******************************************************************************** 2026-05-30T00:02:31,007 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-30T00:02:31,008 License :: OSI Approved :: BSD License 2026-05-30T00:02:31,009 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-30T00:02:31,010 ******************************************************************************** 2026-05-30T00:02:31,011 !! 2026-05-30T00:02:31,011 dist._finalize_license_expression() 2026-05-30T00:02:31,012 /tmp/pip-build-env-q98thwhs/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-05-30T00:02:31,012 !! 2026-05-30T00:02:31,013 ******************************************************************************** 2026-05-30T00:02:31,013 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-05-30T00:02:31,014 License :: OSI Approved :: BSD License 2026-05-30T00:02:31,015 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-05-30T00:02:31,016 ******************************************************************************** 2026-05-30T00:02:31,017 !! 2026-05-30T00:02:31,017 self._finalize_license_expression() 2026-05-30T00:02:31,018 running bdist_wheel 2026-05-30T00:02:31,038 running build 2026-05-30T00:02:31,039 running build_py 2026-05-30T00:02:31,040 creating build/lib/vivarium 2026-05-30T00:02:31,042 copying src/vivarium/__init__.py -> build/lib/vivarium 2026-05-30T00:02:31,045 creating build/lib/vivarium/engine 2026-05-30T00:02:31,046 copying src/vivarium/engine/component.py -> build/lib/vivarium/engine 2026-05-30T00:02:31,049 copying src/vivarium/engine/manager.py -> build/lib/vivarium/engine 2026-05-30T00:02:31,051 copying src/vivarium/engine/types.py -> build/lib/vivarium/engine 2026-05-30T00:02:31,053 copying src/vivarium/engine/exceptions.py -> build/lib/vivarium/engine 2026-05-30T00:02:31,055 copying src/vivarium/engine/__init__.py -> build/lib/vivarium/engine 2026-05-30T00:02:31,057 copying src/vivarium/engine/testing_utilities.py -> build/lib/vivarium/engine 2026-05-30T00:02:31,060 creating build/lib/vivarium/engine/interface 2026-05-30T00:02:31,061 copying src/vivarium/engine/interface/utilities.py -> build/lib/vivarium/engine/interface 2026-05-30T00:02:31,063 copying src/vivarium/engine/interface/cli.py -> build/lib/vivarium/engine/interface 2026-05-30T00:02:31,065 copying src/vivarium/engine/interface/interactive.py -> build/lib/vivarium/engine/interface 2026-05-30T00:02:31,068 copying src/vivarium/engine/interface/__init__.py -> build/lib/vivarium/engine/interface 2026-05-30T00:02:31,070 creating build/lib/vivarium/engine/examples 2026-05-30T00:02:31,071 copying src/vivarium/engine/examples/__init__.py -> build/lib/vivarium/engine/examples 2026-05-30T00:02:31,073 creating build/lib/vivarium/engine/framework 2026-05-30T00:02:31,074 copying src/vivarium/engine/framework/utilities.py -> build/lib/vivarium/engine/framework 2026-05-30T00:02:31,077 copying src/vivarium/engine/framework/configuration.py -> build/lib/vivarium/engine/framework 2026-05-30T00:02:31,079 copying src/vivarium/engine/framework/plugins.py -> build/lib/vivarium/engine/framework 2026-05-30T00:02:31,081 copying src/vivarium/engine/framework/state_machine.py -> build/lib/vivarium/engine/framework 2026-05-30T00:02:31,084 copying src/vivarium/engine/framework/engine.py -> build/lib/vivarium/engine/framework 2026-05-30T00:02:31,086 copying src/vivarium/engine/framework/__init__.py -> build/lib/vivarium/engine/framework 2026-05-30T00:02:31,089 creating build/lib/vivarium/engine/examples/boids 2026-05-30T00:02:31,090 copying src/vivarium/engine/examples/boids/movement.py -> build/lib/vivarium/engine/examples/boids 2026-05-30T00:02:31,092 copying src/vivarium/engine/examples/boids/visualization.py -> build/lib/vivarium/engine/examples/boids 2026-05-30T00:02:31,094 copying src/vivarium/engine/examples/boids/neighbors.py -> build/lib/vivarium/engine/examples/boids 2026-05-30T00:02:31,096 copying src/vivarium/engine/examples/boids/population.py -> build/lib/vivarium/engine/examples/boids 2026-05-30T00:02:31,098 copying src/vivarium/engine/examples/boids/__init__.py -> build/lib/vivarium/engine/examples/boids 2026-05-30T00:02:31,099 copying src/vivarium/engine/examples/boids/forces.py -> build/lib/vivarium/engine/examples/boids 2026-05-30T00:02:31,102 creating build/lib/vivarium/engine/examples/disease_model 2026-05-30T00:02:31,103 copying src/vivarium/engine/examples/disease_model/mortality.py -> build/lib/vivarium/engine/examples/disease_model 2026-05-30T00:02:31,105 copying src/vivarium/engine/examples/disease_model/disease.py -> build/lib/vivarium/engine/examples/disease_model 2026-05-30T00:02:31,107 copying src/vivarium/engine/examples/disease_model/intervention.py -> build/lib/vivarium/engine/examples/disease_model 2026-05-30T00:02:31,109 copying src/vivarium/engine/examples/disease_model/population.py -> build/lib/vivarium/engine/examples/disease_model 2026-05-30T00:02:31,111 copying src/vivarium/engine/examples/disease_model/__init__.py -> build/lib/vivarium/engine/examples/disease_model 2026-05-30T00:02:31,113 copying src/vivarium/engine/examples/disease_model/observer.py -> build/lib/vivarium/engine/examples/disease_model 2026-05-30T00:02:31,115 copying src/vivarium/engine/examples/disease_model/risk.py -> build/lib/vivarium/engine/examples/disease_model 2026-05-30T00:02:31,117 creating build/lib/vivarium/engine/framework/logging 2026-05-30T00:02:31,118 copying src/vivarium/engine/framework/logging/utilities.py -> build/lib/vivarium/engine/framework/logging 2026-05-30T00:02:31,121 copying src/vivarium/engine/framework/logging/manager.py -> build/lib/vivarium/engine/framework/logging 2026-05-30T00:02:31,123 copying src/vivarium/engine/framework/logging/__init__.py -> build/lib/vivarium/engine/framework/logging 2026-05-30T00:02:31,125 copying src/vivarium/engine/framework/logging/interface.py -> build/lib/vivarium/engine/framework/logging 2026-05-30T00:02:31,127 creating build/lib/vivarium/engine/framework/population 2026-05-30T00:02:31,128 copying src/vivarium/engine/framework/population/utilities.py -> build/lib/vivarium/engine/framework/population 2026-05-30T00:02:31,130 copying src/vivarium/engine/framework/population/population_view.py -> build/lib/vivarium/engine/framework/population 2026-05-30T00:02:31,133 copying src/vivarium/engine/framework/population/manager.py -> build/lib/vivarium/engine/framework/population 2026-05-30T00:02:31,136 copying src/vivarium/engine/framework/population/exceptions.py -> build/lib/vivarium/engine/framework/population 2026-05-30T00:02:31,138 copying src/vivarium/engine/framework/population/__init__.py -> build/lib/vivarium/engine/framework/population 2026-05-30T00:02:31,139 copying src/vivarium/engine/framework/population/interface.py -> build/lib/vivarium/engine/framework/population 2026-05-30T00:02:31,142 creating build/lib/vivarium/engine/framework/artifact 2026-05-30T00:02:31,143 copying src/vivarium/engine/framework/artifact/manager.py -> build/lib/vivarium/engine/framework/artifact 2026-05-30T00:02:31,145 copying src/vivarium/engine/framework/artifact/__init__.py -> build/lib/vivarium/engine/framework/artifact 2026-05-30T00:02:31,148 copying src/vivarium/engine/framework/artifact/interface.py -> build/lib/vivarium/engine/framework/artifact 2026-05-30T00:02:31,150 creating build/lib/vivarium/engine/framework/results 2026-05-30T00:02:31,151 copying src/vivarium/engine/framework/results/context.py -> build/lib/vivarium/engine/framework/results 2026-05-30T00:02:31,154 copying src/vivarium/engine/framework/results/manager.py -> build/lib/vivarium/engine/framework/results 2026-05-30T00:02:31,157 copying src/vivarium/engine/framework/results/stratification.py -> build/lib/vivarium/engine/framework/results 2026-05-30T00:02:31,159 copying src/vivarium/engine/framework/results/observation.py -> build/lib/vivarium/engine/framework/results 2026-05-30T00:02:31,162 copying src/vivarium/engine/framework/results/exceptions.py -> build/lib/vivarium/engine/framework/results 2026-05-30T00:02:31,163 copying src/vivarium/engine/framework/results/__init__.py -> build/lib/vivarium/engine/framework/results 2026-05-30T00:02:31,165 copying src/vivarium/engine/framework/results/observer.py -> build/lib/vivarium/engine/framework/results 2026-05-30T00:02:31,167 copying src/vivarium/engine/framework/results/interface.py -> build/lib/vivarium/engine/framework/results 2026-05-30T00:02:31,170 creating build/lib/vivarium/engine/framework/values 2026-05-30T00:02:31,171 copying src/vivarium/engine/framework/values/manager.py -> build/lib/vivarium/engine/framework/values 2026-05-30T00:02:31,174 copying src/vivarium/engine/framework/values/combiners.py -> build/lib/vivarium/engine/framework/values 2026-05-30T00:02:31,176 copying src/vivarium/engine/framework/values/pipeline.py -> build/lib/vivarium/engine/framework/values 2026-05-30T00:02:31,179 copying src/vivarium/engine/framework/values/exceptions.py -> build/lib/vivarium/engine/framework/values 2026-05-30T00:02:31,180 copying src/vivarium/engine/framework/values/__init__.py -> build/lib/vivarium/engine/framework/values 2026-05-30T00:02:31,182 copying src/vivarium/engine/framework/values/post_processors.py -> build/lib/vivarium/engine/framework/values 2026-05-30T00:02:31,184 copying src/vivarium/engine/framework/values/interface.py -> build/lib/vivarium/engine/framework/values 2026-05-30T00:02:31,187 creating build/lib/vivarium/engine/framework/resource 2026-05-30T00:02:31,188 copying src/vivarium/engine/framework/resource/manager.py -> build/lib/vivarium/engine/framework/resource 2026-05-30T00:02:31,191 copying src/vivarium/engine/framework/resource/resource.py -> build/lib/vivarium/engine/framework/resource 2026-05-30T00:02:31,193 copying src/vivarium/engine/framework/resource/exceptions.py -> build/lib/vivarium/engine/framework/resource 2026-05-30T00:02:31,195 copying src/vivarium/engine/framework/resource/__init__.py -> build/lib/vivarium/engine/framework/resource 2026-05-30T00:02:31,197 copying src/vivarium/engine/framework/resource/interface.py -> build/lib/vivarium/engine/framework/resource 2026-05-30T00:02:31,200 creating build/lib/vivarium/engine/framework/event 2026-05-30T00:02:31,201 copying src/vivarium/engine/framework/event/manager.py -> build/lib/vivarium/engine/framework/event 2026-05-30T00:02:31,203 copying src/vivarium/engine/framework/event/__init__.py -> build/lib/vivarium/engine/framework/event 2026-05-30T00:02:31,205 copying src/vivarium/engine/framework/event/interface.py -> build/lib/vivarium/engine/framework/event 2026-05-30T00:02:31,208 creating build/lib/vivarium/engine/framework/lookup 2026-05-30T00:02:31,209 copying src/vivarium/engine/framework/lookup/table.py -> build/lib/vivarium/engine/framework/lookup 2026-05-30T00:02:31,211 copying src/vivarium/engine/framework/lookup/manager.py -> build/lib/vivarium/engine/framework/lookup 2026-05-30T00:02:31,214 copying src/vivarium/engine/framework/lookup/interpolation.py -> build/lib/vivarium/engine/framework/lookup 2026-05-30T00:02:31,216 copying src/vivarium/engine/framework/lookup/__init__.py -> build/lib/vivarium/engine/framework/lookup 2026-05-30T00:02:31,218 copying src/vivarium/engine/framework/lookup/interface.py -> build/lib/vivarium/engine/framework/lookup 2026-05-30T00:02:31,221 creating build/lib/vivarium/engine/framework/lifecycle 2026-05-30T00:02:31,222 copying src/vivarium/engine/framework/lifecycle/constraint_maker.py -> build/lib/vivarium/engine/framework/lifecycle 2026-05-30T00:02:31,225 copying src/vivarium/engine/framework/lifecycle/manager.py -> build/lib/vivarium/engine/framework/lifecycle 2026-05-30T00:02:31,227 copying src/vivarium/engine/framework/lifecycle/entities.py -> build/lib/vivarium/engine/framework/lifecycle 2026-05-30T00:02:31,230 copying src/vivarium/engine/framework/lifecycle/exceptions.py -> build/lib/vivarium/engine/framework/lifecycle 2026-05-30T00:02:31,232 copying src/vivarium/engine/framework/lifecycle/__init__.py -> build/lib/vivarium/engine/framework/lifecycle 2026-05-30T00:02:31,234 copying src/vivarium/engine/framework/lifecycle/interface.py -> build/lib/vivarium/engine/framework/lifecycle 2026-05-30T00:02:31,235 copying src/vivarium/engine/framework/lifecycle/lifecycle_states.py -> build/lib/vivarium/engine/framework/lifecycle 2026-05-30T00:02:31,238 creating build/lib/vivarium/engine/framework/time 2026-05-30T00:02:31,239 copying src/vivarium/engine/framework/time/manager.py -> build/lib/vivarium/engine/framework/time 2026-05-30T00:02:31,241 copying src/vivarium/engine/framework/time/__init__.py -> build/lib/vivarium/engine/framework/time 2026-05-30T00:02:31,243 copying src/vivarium/engine/framework/time/interface.py -> build/lib/vivarium/engine/framework/time 2026-05-30T00:02:31,245 creating build/lib/vivarium/engine/framework/components 2026-05-30T00:02:31,246 copying src/vivarium/engine/framework/components/manager.py -> build/lib/vivarium/engine/framework/components 2026-05-30T00:02:31,249 copying src/vivarium/engine/framework/components/parser.py -> build/lib/vivarium/engine/framework/components 2026-05-30T00:02:31,251 copying src/vivarium/engine/framework/components/__init__.py -> build/lib/vivarium/engine/framework/components 2026-05-30T00:02:31,253 copying src/vivarium/engine/framework/components/interface.py -> build/lib/vivarium/engine/framework/components 2026-05-30T00:02:31,255 creating build/lib/vivarium/engine/framework/randomness 2026-05-30T00:02:31,256 copying src/vivarium/engine/framework/randomness/index_map.py -> build/lib/vivarium/engine/framework/randomness 2026-05-30T00:02:31,259 copying src/vivarium/engine/framework/randomness/stream.py -> build/lib/vivarium/engine/framework/randomness 2026-05-30T00:02:31,262 copying src/vivarium/engine/framework/randomness/manager.py -> build/lib/vivarium/engine/framework/randomness 2026-05-30T00:02:31,264 copying src/vivarium/engine/framework/randomness/exceptions.py -> build/lib/vivarium/engine/framework/randomness 2026-05-30T00:02:31,266 copying src/vivarium/engine/framework/randomness/__init__.py -> build/lib/vivarium/engine/framework/randomness 2026-05-30T00:02:31,268 copying src/vivarium/engine/framework/randomness/interface.py -> build/lib/vivarium/engine/framework/randomness 2026-05-30T00:02:31,270 running egg_info 2026-05-30T00:02:31,283 writing src/vivarium_engine.egg-info/PKG-INFO 2026-05-30T00:02:31,288 writing dependency_links to src/vivarium_engine.egg-info/dependency_links.txt 2026-05-30T00:02:31,290 writing entry points to src/vivarium_engine.egg-info/entry_points.txt 2026-05-30T00:02:31,293 writing requirements to src/vivarium_engine.egg-info/requires.txt 2026-05-30T00:02:31,294 writing top-level names to src/vivarium_engine.egg-info/top_level.txt 2026-05-30T00:02:31,336 /tmp/pip-build-env-q98thwhs/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-05-30T00:02:31,337 return get_active_overrides().subprocess_timeout 2026-05-30T00:02:31,343 listing git files failed - pretending there aren't any 2026-05-30T00:02:31,347 reading manifest file 'src/vivarium_engine.egg-info/SOURCES.txt' 2026-05-30T00:02:31,363 adding license file 'LICENSE' 2026-05-30T00:02:31,375 writing manifest file 'src/vivarium_engine.egg-info/SOURCES.txt' 2026-05-30T00:02:31,392 copying src/vivarium/engine/py.typed -> build/lib/vivarium/engine 2026-05-30T00:02:31,395 copying src/vivarium/engine/examples/disease_model/disease_model.yaml -> build/lib/vivarium/engine/examples/disease_model 2026-05-30T00:02:31,418 installing to build/bdist.linux-armv7l/wheel 2026-05-30T00:02:31,419 running install 2026-05-30T00:02:31,441 running install_lib 2026-05-30T00:02:31,449 creating build/bdist.linux-armv7l/wheel 2026-05-30T00:02:31,451 creating build/bdist.linux-armv7l/wheel/vivarium 2026-05-30T00:02:31,452 copying build/lib/vivarium/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium 2026-05-30T00:02:31,454 creating build/bdist.linux-armv7l/wheel/vivarium/engine 2026-05-30T00:02:31,456 creating build/bdist.linux-armv7l/wheel/vivarium/engine/interface 2026-05-30T00:02:31,457 copying build/lib/vivarium/engine/interface/utilities.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/interface 2026-05-30T00:02:31,459 copying build/lib/vivarium/engine/interface/cli.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/interface 2026-05-30T00:02:31,462 copying build/lib/vivarium/engine/interface/interactive.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/interface 2026-05-30T00:02:31,464 copying build/lib/vivarium/engine/interface/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/interface 2026-05-30T00:02:31,466 creating build/bdist.linux-armv7l/wheel/vivarium/engine/examples 2026-05-30T00:02:31,468 creating build/bdist.linux-armv7l/wheel/vivarium/engine/examples/boids 2026-05-30T00:02:31,469 copying build/lib/vivarium/engine/examples/boids/movement.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/examples/boids 2026-05-30T00:02:31,471 copying build/lib/vivarium/engine/examples/boids/visualization.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/examples/boids 2026-05-30T00:02:31,473 copying build/lib/vivarium/engine/examples/boids/neighbors.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/examples/boids 2026-05-30T00:02:31,475 copying build/lib/vivarium/engine/examples/boids/population.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/examples/boids 2026-05-30T00:02:31,476 copying build/lib/vivarium/engine/examples/boids/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/examples/boids 2026-05-30T00:02:31,478 copying build/lib/vivarium/engine/examples/boids/forces.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/examples/boids 2026-05-30T00:02:31,481 creating build/bdist.linux-armv7l/wheel/vivarium/engine/examples/disease_model 2026-05-30T00:02:31,482 copying build/lib/vivarium/engine/examples/disease_model/mortality.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/examples/disease_model 2026-05-30T00:02:31,484 copying build/lib/vivarium/engine/examples/disease_model/disease.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/examples/disease_model 2026-05-30T00:02:31,487 copying build/lib/vivarium/engine/examples/disease_model/intervention.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/examples/disease_model 2026-05-30T00:02:31,489 copying build/lib/vivarium/engine/examples/disease_model/disease_model.yaml -> build/bdist.linux-armv7l/wheel/./vivarium/engine/examples/disease_model 2026-05-30T00:02:31,490 copying build/lib/vivarium/engine/examples/disease_model/population.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/examples/disease_model 2026-05-30T00:02:31,493 copying build/lib/vivarium/engine/examples/disease_model/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/examples/disease_model 2026-05-30T00:02:31,494 copying build/lib/vivarium/engine/examples/disease_model/observer.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/examples/disease_model 2026-05-30T00:02:31,496 copying build/lib/vivarium/engine/examples/disease_model/risk.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/examples/disease_model 2026-05-30T00:02:31,499 copying build/lib/vivarium/engine/examples/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/examples 2026-05-30T00:02:31,501 creating build/bdist.linux-armv7l/wheel/vivarium/engine/framework 2026-05-30T00:02:31,502 copying build/lib/vivarium/engine/framework/utilities.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework 2026-05-30T00:02:31,505 copying build/lib/vivarium/engine/framework/configuration.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework 2026-05-30T00:02:31,507 copying build/lib/vivarium/engine/framework/plugins.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework 2026-05-30T00:02:31,510 creating build/bdist.linux-armv7l/wheel/vivarium/engine/framework/logging 2026-05-30T00:02:31,511 copying build/lib/vivarium/engine/framework/logging/utilities.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/logging 2026-05-30T00:02:31,513 copying build/lib/vivarium/engine/framework/logging/manager.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/logging 2026-05-30T00:02:31,515 copying build/lib/vivarium/engine/framework/logging/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/logging 2026-05-30T00:02:31,517 copying build/lib/vivarium/engine/framework/logging/interface.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/logging 2026-05-30T00:02:31,519 creating build/bdist.linux-armv7l/wheel/vivarium/engine/framework/population 2026-05-30T00:02:31,520 copying build/lib/vivarium/engine/framework/population/utilities.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/population 2026-05-30T00:02:31,522 copying build/lib/vivarium/engine/framework/population/population_view.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/population 2026-05-30T00:02:31,524 copying build/lib/vivarium/engine/framework/population/manager.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/population 2026-05-30T00:02:31,527 copying build/lib/vivarium/engine/framework/population/exceptions.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/population 2026-05-30T00:02:31,529 copying build/lib/vivarium/engine/framework/population/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/population 2026-05-30T00:02:31,531 copying build/lib/vivarium/engine/framework/population/interface.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/population 2026-05-30T00:02:31,533 copying build/lib/vivarium/engine/framework/state_machine.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework 2026-05-30T00:02:31,536 creating build/bdist.linux-armv7l/wheel/vivarium/engine/framework/artifact 2026-05-30T00:02:31,537 copying build/lib/vivarium/engine/framework/artifact/manager.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/artifact 2026-05-30T00:02:31,540 copying build/lib/vivarium/engine/framework/artifact/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/artifact 2026-05-30T00:02:31,541 copying build/lib/vivarium/engine/framework/artifact/interface.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/artifact 2026-05-30T00:02:31,544 creating build/bdist.linux-armv7l/wheel/vivarium/engine/framework/results 2026-05-30T00:02:31,545 copying build/lib/vivarium/engine/framework/results/context.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/results 2026-05-30T00:02:31,548 copying build/lib/vivarium/engine/framework/results/manager.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/results 2026-05-30T00:02:31,551 copying build/lib/vivarium/engine/framework/results/stratification.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/results 2026-05-30T00:02:31,553 copying build/lib/vivarium/engine/framework/results/observation.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/results 2026-05-30T00:02:31,556 copying build/lib/vivarium/engine/framework/results/exceptions.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/results 2026-05-30T00:02:31,557 copying build/lib/vivarium/engine/framework/results/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/results 2026-05-30T00:02:31,559 copying build/lib/vivarium/engine/framework/results/observer.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/results 2026-05-30T00:02:31,561 copying build/lib/vivarium/engine/framework/results/interface.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/results 2026-05-30T00:02:31,564 creating build/bdist.linux-armv7l/wheel/vivarium/engine/framework/values 2026-05-30T00:02:31,566 copying build/lib/vivarium/engine/framework/values/manager.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/values 2026-05-30T00:02:31,568 copying build/lib/vivarium/engine/framework/values/combiners.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/values 2026-05-30T00:02:31,570 copying build/lib/vivarium/engine/framework/values/pipeline.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/values 2026-05-30T00:02:31,572 copying build/lib/vivarium/engine/framework/values/exceptions.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/values 2026-05-30T00:02:31,574 copying build/lib/vivarium/engine/framework/values/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/values 2026-05-30T00:02:31,576 copying build/lib/vivarium/engine/framework/values/post_processors.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/values 2026-05-30T00:02:31,578 copying build/lib/vivarium/engine/framework/values/interface.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/values 2026-05-30T00:02:31,580 copying build/lib/vivarium/engine/framework/engine.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework 2026-05-30T00:02:31,583 creating build/bdist.linux-armv7l/wheel/vivarium/engine/framework/resource 2026-05-30T00:02:31,584 copying build/lib/vivarium/engine/framework/resource/manager.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/resource 2026-05-30T00:02:31,587 copying build/lib/vivarium/engine/framework/resource/resource.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/resource 2026-05-30T00:02:31,589 copying build/lib/vivarium/engine/framework/resource/exceptions.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/resource 2026-05-30T00:02:31,591 copying build/lib/vivarium/engine/framework/resource/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/resource 2026-05-30T00:02:31,592 copying build/lib/vivarium/engine/framework/resource/interface.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/resource 2026-05-30T00:02:31,595 creating build/bdist.linux-armv7l/wheel/vivarium/engine/framework/event 2026-05-30T00:02:31,595 copying build/lib/vivarium/engine/framework/event/manager.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/event 2026-05-30T00:02:31,598 copying build/lib/vivarium/engine/framework/event/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/event 2026-05-30T00:02:31,599 copying build/lib/vivarium/engine/framework/event/interface.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/event 2026-05-30T00:02:31,602 creating build/bdist.linux-armv7l/wheel/vivarium/engine/framework/lookup 2026-05-30T00:02:31,603 copying build/lib/vivarium/engine/framework/lookup/table.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/lookup 2026-05-30T00:02:31,605 copying build/lib/vivarium/engine/framework/lookup/manager.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/lookup 2026-05-30T00:02:31,608 copying build/lib/vivarium/engine/framework/lookup/interpolation.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/lookup 2026-05-30T00:02:31,610 copying build/lib/vivarium/engine/framework/lookup/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/lookup 2026-05-30T00:02:31,612 copying build/lib/vivarium/engine/framework/lookup/interface.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/lookup 2026-05-30T00:02:31,614 copying build/lib/vivarium/engine/framework/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework 2026-05-30T00:02:31,616 creating build/bdist.linux-armv7l/wheel/vivarium/engine/framework/lifecycle 2026-05-30T00:02:31,617 copying build/lib/vivarium/engine/framework/lifecycle/constraint_maker.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/lifecycle 2026-05-30T00:02:31,619 copying build/lib/vivarium/engine/framework/lifecycle/manager.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/lifecycle 2026-05-30T00:02:31,621 copying build/lib/vivarium/engine/framework/lifecycle/entities.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/lifecycle 2026-05-30T00:02:31,624 copying build/lib/vivarium/engine/framework/lifecycle/exceptions.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/lifecycle 2026-05-30T00:02:31,625 copying build/lib/vivarium/engine/framework/lifecycle/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/lifecycle 2026-05-30T00:02:31,627 copying build/lib/vivarium/engine/framework/lifecycle/interface.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/lifecycle 2026-05-30T00:02:31,629 copying build/lib/vivarium/engine/framework/lifecycle/lifecycle_states.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/lifecycle 2026-05-30T00:02:31,631 creating build/bdist.linux-armv7l/wheel/vivarium/engine/framework/time 2026-05-30T00:02:31,632 copying build/lib/vivarium/engine/framework/time/manager.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/time 2026-05-30T00:02:31,634 copying build/lib/vivarium/engine/framework/time/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/time 2026-05-30T00:02:31,636 copying build/lib/vivarium/engine/framework/time/interface.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/time 2026-05-30T00:02:31,638 creating build/bdist.linux-armv7l/wheel/vivarium/engine/framework/components 2026-05-30T00:02:31,639 copying build/lib/vivarium/engine/framework/components/manager.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/components 2026-05-30T00:02:31,642 copying build/lib/vivarium/engine/framework/components/parser.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/components 2026-05-30T00:02:31,644 copying build/lib/vivarium/engine/framework/components/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/components 2026-05-30T00:02:31,646 copying build/lib/vivarium/engine/framework/components/interface.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/components 2026-05-30T00:02:31,649 creating build/bdist.linux-armv7l/wheel/vivarium/engine/framework/randomness 2026-05-30T00:02:31,650 copying build/lib/vivarium/engine/framework/randomness/index_map.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/randomness 2026-05-30T00:02:31,652 copying build/lib/vivarium/engine/framework/randomness/stream.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/randomness 2026-05-30T00:02:31,654 copying build/lib/vivarium/engine/framework/randomness/manager.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/randomness 2026-05-30T00:02:31,657 copying build/lib/vivarium/engine/framework/randomness/exceptions.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/randomness 2026-05-30T00:02:31,658 copying build/lib/vivarium/engine/framework/randomness/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/randomness 2026-05-30T00:02:31,660 copying build/lib/vivarium/engine/framework/randomness/interface.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/randomness 2026-05-30T00:02:31,662 copying build/lib/vivarium/engine/component.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine 2026-05-30T00:02:31,665 copying build/lib/vivarium/engine/manager.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine 2026-05-30T00:02:31,667 copying build/lib/vivarium/engine/types.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine 2026-05-30T00:02:31,669 copying build/lib/vivarium/engine/exceptions.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine 2026-05-30T00:02:31,671 copying build/lib/vivarium/engine/py.typed -> build/bdist.linux-armv7l/wheel/./vivarium/engine 2026-05-30T00:02:31,673 copying build/lib/vivarium/engine/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine 2026-05-30T00:02:31,674 copying build/lib/vivarium/engine/testing_utilities.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine 2026-05-30T00:02:31,677 running install_egg_info 2026-05-30T00:02:31,683 Copying src/vivarium_engine.egg-info to build/bdist.linux-armv7l/wheel/./vivarium_engine-5.0.1-py3.11.egg-info 2026-05-30T00:02:31,695 running install_scripts 2026-05-30T00:02:31,707 creating build/bdist.linux-armv7l/wheel/vivarium_engine-5.0.1.dist-info/WHEEL 2026-05-30T00:02:31,711 creating '/tmp/pip-wheel-jkrni3nc/.tmp-ldh7wx5u/vivarium_engine-5.0.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-05-30T00:02:31,713 adding 'vivarium/__init__.py' 2026-05-30T00:02:31,715 adding 'vivarium/engine/__init__.py' 2026-05-30T00:02:31,719 adding 'vivarium/engine/component.py' 2026-05-30T00:02:31,720 adding 'vivarium/engine/exceptions.py' 2026-05-30T00:02:31,721 adding 'vivarium/engine/manager.py' 2026-05-30T00:02:31,723 adding 'vivarium/engine/py.typed' 2026-05-30T00:02:31,725 adding 'vivarium/engine/testing_utilities.py' 2026-05-30T00:02:31,726 adding 'vivarium/engine/types.py' 2026-05-30T00:02:31,728 adding 'vivarium/engine/examples/__init__.py' 2026-05-30T00:02:31,730 adding 'vivarium/engine/examples/boids/__init__.py' 2026-05-30T00:02:31,731 adding 'vivarium/engine/examples/boids/forces.py' 2026-05-30T00:02:31,733 adding 'vivarium/engine/examples/boids/movement.py' 2026-05-30T00:02:31,734 adding 'vivarium/engine/examples/boids/neighbors.py' 2026-05-30T00:02:31,735 adding 'vivarium/engine/examples/boids/population.py' 2026-05-30T00:02:31,737 adding 'vivarium/engine/examples/boids/visualization.py' 2026-05-30T00:02:31,739 adding 'vivarium/engine/examples/disease_model/__init__.py' 2026-05-30T00:02:31,740 adding 'vivarium/engine/examples/disease_model/disease.py' 2026-05-30T00:02:31,742 adding 'vivarium/engine/examples/disease_model/disease_model.yaml' 2026-05-30T00:02:31,743 adding 'vivarium/engine/examples/disease_model/intervention.py' 2026-05-30T00:02:31,744 adding 'vivarium/engine/examples/disease_model/mortality.py' 2026-05-30T00:02:31,746 adding 'vivarium/engine/examples/disease_model/observer.py' 2026-05-30T00:02:31,748 adding 'vivarium/engine/examples/disease_model/population.py' 2026-05-30T00:02:31,749 adding 'vivarium/engine/examples/disease_model/risk.py' 2026-05-30T00:02:31,751 adding 'vivarium/engine/framework/__init__.py' 2026-05-30T00:02:31,752 adding 'vivarium/engine/framework/configuration.py' 2026-05-30T00:02:31,754 adding 'vivarium/engine/framework/engine.py' 2026-05-30T00:02:31,756 adding 'vivarium/engine/framework/plugins.py' 2026-05-30T00:02:31,759 adding 'vivarium/engine/framework/state_machine.py' 2026-05-30T00:02:31,761 adding 'vivarium/engine/framework/utilities.py' 2026-05-30T00:02:31,763 adding 'vivarium/engine/framework/artifact/__init__.py' 2026-05-30T00:02:31,764 adding 'vivarium/engine/framework/artifact/interface.py' 2026-05-30T00:02:31,766 adding 'vivarium/engine/framework/artifact/manager.py' 2026-05-30T00:02:31,768 adding 'vivarium/engine/framework/components/__init__.py' 2026-05-30T00:02:31,769 adding 'vivarium/engine/framework/components/interface.py' 2026-05-30T00:02:31,771 adding 'vivarium/engine/framework/components/manager.py' 2026-05-30T00:02:31,773 adding 'vivarium/engine/framework/components/parser.py' 2026-05-30T00:02:31,775 adding 'vivarium/engine/framework/event/__init__.py' 2026-05-30T00:02:31,777 adding 'vivarium/engine/framework/event/interface.py' 2026-05-30T00:02:31,779 adding 'vivarium/engine/framework/event/manager.py' 2026-05-30T00:02:31,781 adding 'vivarium/engine/framework/lifecycle/__init__.py' 2026-05-30T00:02:31,782 adding 'vivarium/engine/framework/lifecycle/constraint_maker.py' 2026-05-30T00:02:31,784 adding 'vivarium/engine/framework/lifecycle/entities.py' 2026-05-30T00:02:31,786 adding 'vivarium/engine/framework/lifecycle/exceptions.py' 2026-05-30T00:02:31,787 adding 'vivarium/engine/framework/lifecycle/interface.py' 2026-05-30T00:02:31,788 adding 'vivarium/engine/framework/lifecycle/lifecycle_states.py' 2026-05-30T00:02:31,790 adding 'vivarium/engine/framework/lifecycle/manager.py' 2026-05-30T00:02:31,792 adding 'vivarium/engine/framework/logging/__init__.py' 2026-05-30T00:02:31,793 adding 'vivarium/engine/framework/logging/interface.py' 2026-05-30T00:02:31,794 adding 'vivarium/engine/framework/logging/manager.py' 2026-05-30T00:02:31,796 adding 'vivarium/engine/framework/logging/utilities.py' 2026-05-30T00:02:31,798 adding 'vivarium/engine/framework/lookup/__init__.py' 2026-05-30T00:02:31,799 adding 'vivarium/engine/framework/lookup/interface.py' 2026-05-30T00:02:31,802 adding 'vivarium/engine/framework/lookup/interpolation.py' 2026-05-30T00:02:31,803 adding 'vivarium/engine/framework/lookup/manager.py' 2026-05-30T00:02:31,805 adding 'vivarium/engine/framework/lookup/table.py' 2026-05-30T00:02:31,807 adding 'vivarium/engine/framework/population/__init__.py' 2026-05-30T00:02:31,809 adding 'vivarium/engine/framework/population/exceptions.py' 2026-05-30T00:02:31,810 adding 'vivarium/engine/framework/population/interface.py' 2026-05-30T00:02:31,814 adding 'vivarium/engine/framework/population/manager.py' 2026-05-30T00:02:31,817 adding 'vivarium/engine/framework/population/population_view.py' 2026-05-30T00:02:31,819 adding 'vivarium/engine/framework/population/utilities.py' 2026-05-30T00:02:31,820 adding 'vivarium/engine/framework/randomness/__init__.py' 2026-05-30T00:02:31,822 adding 'vivarium/engine/framework/randomness/exceptions.py' 2026-05-30T00:02:31,823 adding 'vivarium/engine/framework/randomness/index_map.py' 2026-05-30T00:02:31,825 adding 'vivarium/engine/framework/randomness/interface.py' 2026-05-30T00:02:31,826 adding 'vivarium/engine/framework/randomness/manager.py' 2026-05-30T00:02:31,829 adding 'vivarium/engine/framework/randomness/stream.py' 2026-05-30T00:02:31,831 adding 'vivarium/engine/framework/resource/__init__.py' 2026-05-30T00:02:31,832 adding 'vivarium/engine/framework/resource/exceptions.py' 2026-05-30T00:02:31,833 adding 'vivarium/engine/framework/resource/interface.py' 2026-05-30T00:02:31,835 adding 'vivarium/engine/framework/resource/manager.py' 2026-05-30T00:02:31,837 adding 'vivarium/engine/framework/resource/resource.py' 2026-05-30T00:02:31,839 adding 'vivarium/engine/framework/results/__init__.py' 2026-05-30T00:02:31,841 adding 'vivarium/engine/framework/results/context.py' 2026-05-30T00:02:31,843 adding 'vivarium/engine/framework/results/exceptions.py' 2026-05-30T00:02:31,845 adding 'vivarium/engine/framework/results/interface.py' 2026-05-30T00:02:31,847 adding 'vivarium/engine/framework/results/manager.py' 2026-05-30T00:02:31,850 adding 'vivarium/engine/framework/results/observation.py' 2026-05-30T00:02:31,851 adding 'vivarium/engine/framework/results/observer.py' 2026-05-30T00:02:31,853 adding 'vivarium/engine/framework/results/stratification.py' 2026-05-30T00:02:31,855 adding 'vivarium/engine/framework/time/__init__.py' 2026-05-30T00:02:31,856 adding 'vivarium/engine/framework/time/interface.py' 2026-05-30T00:02:31,858 adding 'vivarium/engine/framework/time/manager.py' 2026-05-30T00:02:31,860 adding 'vivarium/engine/framework/values/__init__.py' 2026-05-30T00:02:31,862 adding 'vivarium/engine/framework/values/combiners.py' 2026-05-30T00:02:31,863 adding 'vivarium/engine/framework/values/exceptions.py' 2026-05-30T00:02:31,865 adding 'vivarium/engine/framework/values/interface.py' 2026-05-30T00:02:31,867 adding 'vivarium/engine/framework/values/manager.py' 2026-05-30T00:02:31,870 adding 'vivarium/engine/framework/values/pipeline.py' 2026-05-30T00:02:31,871 adding 'vivarium/engine/framework/values/post_processors.py' 2026-05-30T00:02:31,873 adding 'vivarium/engine/interface/__init__.py' 2026-05-30T00:02:31,875 adding 'vivarium/engine/interface/cli.py' 2026-05-30T00:02:31,877 adding 'vivarium/engine/interface/interactive.py' 2026-05-30T00:02:31,878 adding 'vivarium/engine/interface/utilities.py' 2026-05-30T00:02:31,881 adding 'vivarium_engine-5.0.1.dist-info/licenses/LICENSE' 2026-05-30T00:02:31,882 adding 'vivarium_engine-5.0.1.dist-info/METADATA' 2026-05-30T00:02:31,883 adding 'vivarium_engine-5.0.1.dist-info/WHEEL' 2026-05-30T00:02:31,884 adding 'vivarium_engine-5.0.1.dist-info/entry_points.txt' 2026-05-30T00:02:31,885 adding 'vivarium_engine-5.0.1.dist-info/top_level.txt' 2026-05-30T00:02:31,887 adding 'vivarium_engine-5.0.1.dist-info/RECORD' 2026-05-30T00:02:31,891 removing build/bdist.linux-armv7l/wheel 2026-05-30T00:02:32,023 Building wheel for vivarium-engine (pyproject.toml): finished with status 'done' 2026-05-30T00:02:32,032 Created wheel for vivarium-engine: filename=vivarium_engine-5.0.1-py3-none-any.whl size=176305 sha256=8c844b458c4ad1a04f25af324af3c027fce8d5126ac8513e22f77386c8e5463a 2026-05-30T00:02:32,033 Stored in directory: /tmp/pip-ephem-wheel-cache-ej_izpv5/wheels/23/42/68/80582429a8de46fdbc9b2da253838643f6ed7beac6127a6d11 2026-05-30T00:02:32,047 Successfully built vivarium-engine 2026-05-30T00:02:32,056 Removed build tracker: '/tmp/pip-build-tracker-4ebmha4b'