2026-05-30T13:43:14,187 Created temporary directory: /tmp/pip-ephem-wheel-cache-mtdnks12
2026-05-30T13:43:14,189 Created temporary directory: /tmp/pip-build-tracker-5hudnars
2026-05-30T13:43:14,189 Initialized build tracking at /tmp/pip-build-tracker-5hudnars
2026-05-30T13:43:14,190 Created build tracker: /tmp/pip-build-tracker-5hudnars
2026-05-30T13:43:14,190 Entered build tracker: /tmp/pip-build-tracker-5hudnars
2026-05-30T13:43:14,191 Created temporary directory: /tmp/pip-wheel-ixdo0j__
2026-05-30T13:43:14,194 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-05-30T13:43:14,196 Created temporary directory: /tmp/pip-ephem-wheel-cache-x_tgt7ui
2026-05-30T13:43:14,218 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-05-30T13:43:14,222 2 location(s) to search for versions of daylily-omics-analysis:
2026-05-30T13:43:14,222 * https://pypi.org/simple/daylily-omics-analysis/
2026-05-30T13:43:14,222 * https://www.piwheels.org/simple/daylily-omics-analysis/
2026-05-30T13:43:14,223 Fetching project page and analyzing links: https://pypi.org/simple/daylily-omics-analysis/
2026-05-30T13:43:14,224 Getting page https://pypi.org/simple/daylily-omics-analysis/
2026-05-30T13:43:14,225 Found index url https://pypi.org/simple
2026-05-30T13:43:14,452 Fetched page https://pypi.org/simple/daylily-omics-analysis/ as application/vnd.pypi.simple.v1+json
2026-05-30T13:43:14,457   Skipping link: No binaries permitted for daylily-omics-analysis: https://files.pythonhosted.org/packages/a7/c0/c7f87fe2429dc16efa2623775fd6c37a32ac341ac5d3b7f8cd6bb14fa835/daylily_omics_analysis-0.7.639-py3-none-any.whl (from https://pypi.org/simple/daylily-omics-analysis/)
2026-05-30T13:43:14,457   Found link https://files.pythonhosted.org/packages/92/89/e55943c71ae2303a92e8a458fba0e7fe160d25977712ab98ac4671e18814/daylily_omics_analysis-0.7.639.tar.gz (from https://pypi.org/simple/daylily-omics-analysis/), version: 0.7.639
2026-05-30T13:43:14,458   Skipping link: No binaries permitted for daylily-omics-analysis: https://files.pythonhosted.org/packages/2b/91/5d7f9aa2cffbe41c8fc9a1260decd11845a4e3e974398d1c418ca065dc38/daylily_omics_analysis-0.7.641-py3-none-any.whl (from https://pypi.org/simple/daylily-omics-analysis/)
2026-05-30T13:43:14,459   Skipping link: No binaries permitted for daylily-omics-analysis: https://files.pythonhosted.org/packages/52/06/9c15f7694456c80c6a4227854689944736bac2c5ce406bd3b3071c870ec0/daylily_omics_analysis-0.7.711-py3-none-any.whl (from https://pypi.org/simple/daylily-omics-analysis/)
2026-05-30T13:43:14,460   Skipping link: No binaries permitted for daylily-omics-analysis: https://files.pythonhosted.org/packages/a8/d5/c4a1cb494388a7c81f0fb19436129b7dc7beeeac6cc84818a6d3fec5b23e/daylily_omics_analysis-0.7.712-py3-none-any.whl (from https://pypi.org/simple/daylily-omics-analysis/)
2026-05-30T13:43:14,460   Found link https://files.pythonhosted.org/packages/41/c5/d2731e5230fbc90cb6a7432ef958fe13f8aa07a4c9ab00355fb5d59ca681/daylily_omics_analysis-0.7.712.tar.gz (from https://pypi.org/simple/daylily-omics-analysis/), version: 0.7.712
2026-05-30T13:43:14,461   Skipping link: No binaries permitted for daylily-omics-analysis: https://files.pythonhosted.org/packages/b7/37/8ada5ffff048ae93948bf19dab2e1a6efbab724a0b452a0d184b2e45adb3/daylily_omics_analysis-0.7.758-py3-none-any.whl (from https://pypi.org/simple/daylily-omics-analysis/)
2026-05-30T13:43:14,462   Found link https://files.pythonhosted.org/packages/72/17/9a8258588037750f29dbf4d76a0b84a5e43968f4337de2fc531099f6b1e1/daylily_omics_analysis-0.7.758.tar.gz (from https://pypi.org/simple/daylily-omics-analysis/), version: 0.7.758
2026-05-30T13:43:14,462   Skipping link: No binaries permitted for daylily-omics-analysis: https://files.pythonhosted.org/packages/4a/ec/44d7002b41d105864e471d2648e6dee149e928e6efa9a5312dcfde5b2e32/daylily_omics_analysis-1.0.9-py3-none-any.whl (from https://pypi.org/simple/daylily-omics-analysis/)
2026-05-30T13:43:14,463   Found link https://files.pythonhosted.org/packages/15/89/f64acab85f213beb76eeb2db97f3a62c1b6d3b313833870403ef7c6975d3/daylily_omics_analysis-1.0.9.tar.gz (from https://pypi.org/simple/daylily-omics-analysis/), version: 1.0.9
2026-05-30T13:43:14,464   Skipping link: No binaries permitted for daylily-omics-analysis: https://files.pythonhosted.org/packages/b8/5b/060fa27e7c43741204ef6a039a00a1c86bf16fde3aa2d3ff5c949ece6c1a/daylily_omics_analysis-2.0.17.dev2-py3-none-any.whl (from https://pypi.org/simple/daylily-omics-analysis/)
2026-05-30T13:43:14,465   Found link https://files.pythonhosted.org/packages/9d/83/de30b6f612aef698102354b2191adb600b411efda93696644740a8de83f1/daylily_omics_analysis-2.0.17.dev2.tar.gz (from https://pypi.org/simple/daylily-omics-analysis/), version: 2.0.17.dev2
2026-05-30T13:43:14,465   Skipping link: No binaries permitted for daylily-omics-analysis: https://files.pythonhosted.org/packages/13/b3/669b6c401ee1fa75de89888e04f5870217a2e636a5f04afffb667d3f182e/daylily_omics_analysis-2.0.17-py3-none-any.whl (from https://pypi.org/simple/daylily-omics-analysis/)
2026-05-30T13:43:14,466   Found link https://files.pythonhosted.org/packages/c7/4e/305e45c5b32231d6fc753fff133cfc6dbf07a4cad3c8947673efef062515/daylily_omics_analysis-2.0.17.tar.gz (from https://pypi.org/simple/daylily-omics-analysis/), version: 2.0.17
2026-05-30T13:43:14,466   Skipping link: No binaries permitted for daylily-omics-analysis: https://files.pythonhosted.org/packages/7a/d9/336d41e808db785fa69c91a6385cbdb33cba67f8b7fac546b7bda42b45c0/daylily_omics_analysis-2.0.19-py3-none-any.whl (from https://pypi.org/simple/daylily-omics-analysis/)
2026-05-30T13:43:14,467   Found link https://files.pythonhosted.org/packages/db/f7/4a21b605401fc1b08f33f09bdb9c2a592976477d5801873851ab8df123c3/daylily_omics_analysis-2.0.19.tar.gz (from https://pypi.org/simple/daylily-omics-analysis/), version: 2.0.19
2026-05-30T13:43:14,468   Skipping link: No binaries permitted for daylily-omics-analysis: https://files.pythonhosted.org/packages/0c/0d/82ea2c104701eb4b96f548f8a2540ae14da24aff8f146dadb7bfb1d82ad9/daylily_omics_analysis-2.0.23-py3-none-any.whl (from https://pypi.org/simple/daylily-omics-analysis/)
2026-05-30T13:43:14,468   Found link https://files.pythonhosted.org/packages/a9/60/e729b6dfca818af86f9fce6b23a20d3105e15c93a3045888101b5ae33aa2/daylily_omics_analysis-2.0.23.tar.gz (from https://pypi.org/simple/daylily-omics-analysis/), version: 2.0.23
2026-05-30T13:43:14,469 Fetching project page and analyzing links: https://www.piwheels.org/simple/daylily-omics-analysis/
2026-05-30T13:43:14,470 Getting page https://www.piwheels.org/simple/daylily-omics-analysis/
2026-05-30T13:43:14,472 Found index url https://www.piwheels.org/simple
2026-05-30T13:43:14,651 Fetched page https://www.piwheels.org/simple/daylily-omics-analysis/ as text/html
2026-05-30T13:43:14,655   Skipping link: No binaries permitted for daylily-omics-analysis: https://www.piwheels.org/simple/daylily-omics-analysis/daylily_omics_analysis-2.0.19-py3-none-any.whl#sha256=0cba589eee81ae091e0c85fb4b05ec6ba6365a7f8ff342b65e18709abb7ef013 (from https://www.piwheels.org/simple/daylily-omics-analysis/)
2026-05-30T13:43:14,656   Skipping link: No binaries permitted for daylily-omics-analysis: https://www.piwheels.org/simple/daylily-omics-analysis/daylily_omics_analysis-2.0.17-py3-none-any.whl#sha256=dbe2ef6c6ef90b56343912cc2b879fcad2e6c7ee44a1d837c9841bff61c47b91 (from https://www.piwheels.org/simple/daylily-omics-analysis/)
2026-05-30T13:43:14,656   Skipping link: No binaries permitted for daylily-omics-analysis: https://www.piwheels.org/simple/daylily-omics-analysis/daylily_omics_analysis-2.0.17.dev2-py3-none-any.whl#sha256=a827b408df89061f39883ede13b2c26835532cd881a46246cbb7930f3c8cc564 (from https://www.piwheels.org/simple/daylily-omics-analysis/)
2026-05-30T13:43:14,657   Skipping link: No binaries permitted for daylily-omics-analysis: https://www.piwheels.org/simple/daylily-omics-analysis/daylily_omics_analysis-1.0.9-py3-none-any.whl#sha256=987722f907dbd4701f4e6f1861c1fc8df3ac455ad450d8c309501fc1620b6e1f (from https://www.piwheels.org/simple/daylily-omics-analysis/)
2026-05-30T13:43:14,658   Skipping link: No binaries permitted for daylily-omics-analysis: https://www.piwheels.org/simple/daylily-omics-analysis/daylily_omics_analysis-0.7.758-py3-none-any.whl#sha256=f5faa84792a79101018dd514e3a41f818b6a4d4516ba64b0b57cb4a8abed9d90 (from https://www.piwheels.org/simple/daylily-omics-analysis/)
2026-05-30T13:43:14,658   Skipping link: No binaries permitted for daylily-omics-analysis: https://archive1.piwheels.org/simple/daylily-omics-analysis/daylily_omics_analysis-0.7.712-py3-none-any.whl#sha256=85716a3e6ac641b8cd86f2aad9caa9e18b81e41800e274eb48307c7273c73ad3 (from https://www.piwheels.org/simple/daylily-omics-analysis/)
2026-05-30T13:43:14,659   Skipping link: No binaries permitted for daylily-omics-analysis: https://archive1.piwheels.org/simple/daylily-omics-analysis/daylily_omics_analysis-0.7.639-py3-none-any.whl#sha256=28b2e6469407505a2e5c924e931b4e0a314f918400fee1db619db09de777df57 (from https://www.piwheels.org/simple/daylily-omics-analysis/)
2026-05-30T13:43:14,659 Skipping link: not a file: https://www.piwheels.org/simple/daylily-omics-analysis/
2026-05-30T13:43:14,660 Skipping link: not a file: https://pypi.org/simple/daylily-omics-analysis/
2026-05-30T13:43:14,679 Given no hashes to check 1 links for project 'daylily-omics-analysis': discarding no candidates
2026-05-30T13:43:14,697 Collecting daylily-omics-analysis==2.0.23
2026-05-30T13:43:14,699   Created temporary directory: /tmp/pip-unpack-p68ymn0i
2026-05-30T13:43:14,930   Downloading daylily_omics_analysis-2.0.23.tar.gz (17.1 MB)
2026-05-30T13:43:21,115   Added daylily-omics-analysis==2.0.23 from https://files.pythonhosted.org/packages/a9/60/e729b6dfca818af86f9fce6b23a20d3105e15c93a3045888101b5ae33aa2/daylily_omics_analysis-2.0.23.tar.gz to build tracker '/tmp/pip-build-tracker-5hudnars'
2026-05-30T13:43:21,120   Created temporary directory: /tmp/pip-build-env-wsi_kr91
2026-05-30T13:43:21,125   Installing build dependencies: started
2026-05-30T13:43:21,126   Running command pip subprocess to install build dependencies
2026-05-30T13:43:22,270   Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11)
2026-05-30T13:43:22,720   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-05-30T13:43:22,743   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-05-30T13:43:24,541   Collecting setuptools>=64
2026-05-30T13:43:24,542     Obtaining dependency information for setuptools>=64 from https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl.metadata
2026-05-30T13:43:24,557     Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl.metadata (6.5 kB)
2026-05-30T13:43:24,898   Collecting setuptools-scm>=8
2026-05-30T13:43:24,899     Obtaining dependency information for setuptools-scm>=8 from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl.metadata
2026-05-30T13:43:24,914     Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl.metadata (6.5 kB)
2026-05-30T13:43:24,995   Collecting vcs-versioning>=1.0.0.dev0
2026-05-30T13:43:24,997     Obtaining dependency information for vcs-versioning>=1.0.0.dev0 from https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl.metadata
2026-05-30T13:43:25,011     Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl.metadata (1.6 kB)
2026-05-30T13:43:25,193   Collecting packaging>=20
2026-05-30T13:43:25,194     Obtaining dependency information for packaging>=20 from https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata
2026-05-30T13:43:25,209     Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata (3.5 kB)
2026-05-30T13:43:25,415   Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl (21 kB)
2026-05-30T13:43:25,435   Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB)
2026-05-30T13:43:25,453   Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl (79 kB)
2026-05-30T13:43:25,531   Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB)
2026-05-30T13:43:25,562   Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl (21 kB)
2026-05-30T13:43:25,588   Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB)
2026-05-30T13:43:25,613   Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl (79 kB)
2026-05-30T13:43:25,701   Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB)
2026-05-30T13:43:28,469   Installing collected packages: setuptools, packaging, vcs-versioning, setuptools-scm
2026-05-30T13:43:32,140     Creating /tmp/pip-build-env-wsi_kr91/overlay/local/bin
2026-05-30T13:43:32,142     changing mode of /tmp/pip-build-env-wsi_kr91/overlay/local/bin/vcs-versioning to 755
2026-05-30T13:43:32,252     changing mode of /tmp/pip-build-env-wsi_kr91/overlay/local/bin/setuptools-scm to 755
2026-05-30T13:43:32,280   Successfully installed packaging-26.2 setuptools-82.0.1 setuptools-scm-10.0.5 vcs-versioning-1.1.1
2026-05-30T13:43:32,572   Installing build dependencies: finished with status 'done'
2026-05-30T13:43:32,579   Getting requirements to build wheel: started
2026-05-30T13:43:32,580   Running command Getting requirements to build wheel
2026-05-30T13:43:33,317   running egg_info
2026-05-30T13:43:33,325   writing daylily_omics_analysis.egg-info/PKG-INFO
2026-05-30T13:43:33,328   writing dependency_links to daylily_omics_analysis.egg-info/dependency_links.txt
2026-05-30T13:43:33,330   writing top-level names to daylily_omics_analysis.egg-info/top_level.txt
2026-05-30T13:43:33,375   /tmp/pip-build-env-wsi_kr91/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly.
2026-05-30T13:43:33,375     return get_active_overrides().subprocess_timeout
2026-05-30T13:43:33,383   listing git files failed - pretending there aren't any
2026-05-30T13:43:33,388   reading manifest file 'daylily_omics_analysis.egg-info/SOURCES.txt'
2026-05-30T13:43:33,554   reading manifest template 'MANIFEST.in'
2026-05-30T13:43:33,556   no previously-included directories found matching '.test_data'
2026-05-30T13:43:33,558   no previously-included directories found matching 'resources'
2026-05-30T13:43:33,559   no previously-included directories found matching 'docs/images'
2026-05-30T13:43:33,562   warning: no previously-included files matching '__pycache__' found anywhere in distribution
2026-05-30T13:43:33,564   warning: no previously-included files matching '*.py[cod]' found anywhere in distribution
2026-05-30T13:43:33,567   warning: no previously-included files matching '.DS_Store' found anywhere in distribution
2026-05-30T13:43:33,567   adding license file 'LICENSE'
2026-05-30T13:43:33,599   writing manifest file 'daylily_omics_analysis.egg-info/SOURCES.txt'
2026-05-30T13:43:33,700   Getting requirements to build wheel: finished with status 'done'
2026-05-30T13:43:33,703   Created temporary directory: /tmp/pip-modern-metadata-869xwft2
2026-05-30T13:43:33,705   Preparing metadata (pyproject.toml): started
2026-05-30T13:43:33,707   Running command Preparing metadata (pyproject.toml)
2026-05-30T13:43:34,368   running dist_info
2026-05-30T13:43:34,382   creating /tmp/pip-modern-metadata-869xwft2/daylily_omics_analysis.egg-info
2026-05-30T13:43:34,383   writing /tmp/pip-modern-metadata-869xwft2/daylily_omics_analysis.egg-info/PKG-INFO
2026-05-30T13:43:34,386   writing dependency_links to /tmp/pip-modern-metadata-869xwft2/daylily_omics_analysis.egg-info/dependency_links.txt
2026-05-30T13:43:34,388   writing top-level names to /tmp/pip-modern-metadata-869xwft2/daylily_omics_analysis.egg-info/top_level.txt
2026-05-30T13:43:34,389   writing manifest file '/tmp/pip-modern-metadata-869xwft2/daylily_omics_analysis.egg-info/SOURCES.txt'
2026-05-30T13:43:34,430   /tmp/pip-build-env-wsi_kr91/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly.
2026-05-30T13:43:34,431     return get_active_overrides().subprocess_timeout
2026-05-30T13:43:34,437   listing git files failed - pretending there aren't any
2026-05-30T13:43:34,441   reading manifest file '/tmp/pip-modern-metadata-869xwft2/daylily_omics_analysis.egg-info/SOURCES.txt'
2026-05-30T13:43:34,443   reading manifest template 'MANIFEST.in'
2026-05-30T13:43:34,444   no previously-included directories found matching '.test_data'
2026-05-30T13:43:34,445   no previously-included directories found matching 'resources'
2026-05-30T13:43:34,445   no previously-included directories found matching 'docs/images'
2026-05-30T13:43:34,446   warning: no previously-included files matching '__pycache__' found anywhere in distribution
2026-05-30T13:43:34,447   warning: no previously-included files matching '*.py[cod]' found anywhere in distribution
2026-05-30T13:43:34,447   warning: no previously-included files matching '.DS_Store' found anywhere in distribution
2026-05-30T13:43:34,448   adding license file 'LICENSE'
2026-05-30T13:43:34,451   writing manifest file '/tmp/pip-modern-metadata-869xwft2/daylily_omics_analysis.egg-info/SOURCES.txt'
2026-05-30T13:43:34,452   creating '/tmp/pip-modern-metadata-869xwft2/daylily_omics_analysis-2.0.23.dist-info'
2026-05-30T13:43:34,583   Preparing metadata (pyproject.toml): finished with status 'done'
2026-05-30T13:43:34,587   Source in /tmp/pip-wheel-ixdo0j__/daylily-omics-analysis_3f6352ece8cd484290d071372ecc3d0c has version 2.0.23, which satisfies requirement daylily-omics-analysis==2.0.23 from https://files.pythonhosted.org/packages/a9/60/e729b6dfca818af86f9fce6b23a20d3105e15c93a3045888101b5ae33aa2/daylily_omics_analysis-2.0.23.tar.gz
2026-05-30T13:43:34,588   Removed daylily-omics-analysis==2.0.23 from https://files.pythonhosted.org/packages/a9/60/e729b6dfca818af86f9fce6b23a20d3105e15c93a3045888101b5ae33aa2/daylily_omics_analysis-2.0.23.tar.gz from build tracker '/tmp/pip-build-tracker-5hudnars'
2026-05-30T13:43:34,592 Created temporary directory: /tmp/pip-unpack-_hwcok5c
2026-05-30T13:43:34,593 Building wheels for collected packages: daylily-omics-analysis
2026-05-30T13:43:34,597   Created temporary directory: /tmp/pip-wheel-y60zy9xb
2026-05-30T13:43:34,598   Destination directory: /tmp/pip-wheel-y60zy9xb
2026-05-30T13:43:34,600   Building wheel for daylily-omics-analysis (pyproject.toml): started
2026-05-30T13:43:34,601   Running command Building wheel for daylily-omics-analysis (pyproject.toml)
2026-05-30T13:43:35,250   running bdist_wheel
2026-05-30T13:43:35,285   running build
2026-05-30T13:43:35,286   running build_py
2026-05-30T13:43:35,287   creating build/lib/daylily_omics_analysis
2026-05-30T13:43:35,290   copying daylily_omics_analysis/pipeline_reports.py -> build/lib/daylily_omics_analysis
2026-05-30T13:43:35,293   copying daylily_omics_analysis/evidence_manifest.py -> build/lib/daylily_omics_analysis
2026-05-30T13:43:35,296   copying daylily_omics_analysis/__init__.py -> build/lib/daylily_omics_analysis
2026-05-30T13:43:35,298   copying daylily_omics_analysis/workflow_catalog.py -> build/lib/daylily_omics_analysis
2026-05-30T13:43:35,302   creating build/lib/daylily_omics_analysis/data
2026-05-30T13:43:35,303   copying daylily_omics_analysis/data/workflow_catalog.v1.json -> build/lib/daylily_omics_analysis/data
2026-05-30T13:43:35,322   installing to build/bdist.linux-armv7l/wheel
2026-05-30T13:43:35,323   running install
2026-05-30T13:43:35,346   running install_lib
2026-05-30T13:43:35,356   creating build/bdist.linux-armv7l/wheel
2026-05-30T13:43:35,358   creating build/bdist.linux-armv7l/wheel/daylily_omics_analysis
2026-05-30T13:43:35,359   copying build/lib/daylily_omics_analysis/pipeline_reports.py -> build/bdist.linux-armv7l/wheel/./daylily_omics_analysis
2026-05-30T13:43:35,361   copying build/lib/daylily_omics_analysis/evidence_manifest.py -> build/bdist.linux-armv7l/wheel/./daylily_omics_analysis
2026-05-30T13:43:35,364   copying build/lib/daylily_omics_analysis/__init__.py -> build/bdist.linux-armv7l/wheel/./daylily_omics_analysis
2026-05-30T13:43:35,366   creating build/bdist.linux-armv7l/wheel/daylily_omics_analysis/data
2026-05-30T13:43:35,367   copying build/lib/daylily_omics_analysis/data/workflow_catalog.v1.json -> build/bdist.linux-armv7l/wheel/./daylily_omics_analysis/data
2026-05-30T13:43:35,370   copying build/lib/daylily_omics_analysis/workflow_catalog.py -> build/bdist.linux-armv7l/wheel/./daylily_omics_analysis
2026-05-30T13:43:35,372   running install_egg_info
2026-05-30T13:43:35,393   running egg_info
2026-05-30T13:43:35,400   writing daylily_omics_analysis.egg-info/PKG-INFO
2026-05-30T13:43:35,402   writing dependency_links to daylily_omics_analysis.egg-info/dependency_links.txt
2026-05-30T13:43:35,403   writing top-level names to daylily_omics_analysis.egg-info/top_level.txt
2026-05-30T13:43:35,430   /tmp/pip-build-env-wsi_kr91/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly.
2026-05-30T13:43:35,430     return get_active_overrides().subprocess_timeout
2026-05-30T13:43:35,437   listing git files failed - pretending there aren't any
2026-05-30T13:43:35,441   reading manifest file 'daylily_omics_analysis.egg-info/SOURCES.txt'
2026-05-30T13:43:35,488   reading manifest template 'MANIFEST.in'
2026-05-30T13:43:35,490   no previously-included directories found matching '.test_data'
2026-05-30T13:43:35,491   no previously-included directories found matching 'resources'
2026-05-30T13:43:35,492   no previously-included directories found matching 'docs/images'
2026-05-30T13:43:35,494   warning: no previously-included files matching '__pycache__' found anywhere in distribution
2026-05-30T13:43:35,497   warning: no previously-included files matching '*.py[cod]' found anywhere in distribution
2026-05-30T13:43:35,499   warning: no previously-included files matching '.DS_Store' found anywhere in distribution
2026-05-30T13:43:35,499   adding license file 'LICENSE'
2026-05-30T13:43:35,529   writing manifest file 'daylily_omics_analysis.egg-info/SOURCES.txt'
2026-05-30T13:43:35,531   Copying daylily_omics_analysis.egg-info to build/bdist.linux-armv7l/wheel/./daylily_omics_analysis-2.0.23-py3.11.egg-info
2026-05-30T13:43:35,541   running install_scripts
2026-05-30T13:43:35,552   creating build/bdist.linux-armv7l/wheel/daylily_omics_analysis-2.0.23.dist-info/WHEEL
2026-05-30T13:43:35,555   creating '/tmp/pip-wheel-y60zy9xb/.tmp-cldig8vr/daylily_omics_analysis-2.0.23-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2026-05-30T13:43:35,557   adding 'daylily_omics_analysis/__init__.py'
2026-05-30T13:43:35,560   adding 'daylily_omics_analysis/evidence_manifest.py'
2026-05-30T13:43:35,562   adding 'daylily_omics_analysis/pipeline_reports.py'
2026-05-30T13:43:35,564   adding 'daylily_omics_analysis/workflow_catalog.py'
2026-05-30T13:43:35,567   adding 'daylily_omics_analysis/data/workflow_catalog.v1.json'
2026-05-30T13:43:35,575   adding 'daylily_omics_analysis-2.0.23.dist-info/licenses/LICENSE'
2026-05-30T13:43:35,576   adding 'daylily_omics_analysis-2.0.23.dist-info/METADATA'
2026-05-30T13:43:35,577   adding 'daylily_omics_analysis-2.0.23.dist-info/WHEEL'
2026-05-30T13:43:35,578   adding 'daylily_omics_analysis-2.0.23.dist-info/top_level.txt'
2026-05-30T13:43:35,579   adding 'daylily_omics_analysis-2.0.23.dist-info/RECORD'
2026-05-30T13:43:35,580   removing build/bdist.linux-armv7l/wheel
2026-05-30T13:43:35,684   Building wheel for daylily-omics-analysis (pyproject.toml): finished with status 'done'
2026-05-30T13:43:35,690   Created wheel for daylily-omics-analysis: filename=daylily_omics_analysis-2.0.23-py3-none-any.whl size=28522 sha256=4a484389b58dd3e399ebb384fe981cf40530c27b7af1008f18c3857cbce461a4
2026-05-30T13:43:35,691   Stored in directory: /tmp/pip-ephem-wheel-cache-x_tgt7ui/wheels/bf/ed/c3/e9b1ed098ed6a43c7326183b016157307f50c04f55cb3fc245
2026-05-30T13:43:35,701 Successfully built daylily-omics-analysis
2026-05-30T13:43:35,705 Removed build tracker: '/tmp/pip-build-tracker-5hudnars'