2026-06-01T18:56:47,130 Created temporary directory: /tmp/pip-ephem-wheel-cache-eea34hsm 2026-06-01T18:56:47,132 Created temporary directory: /tmp/pip-build-tracker-z05w6__t 2026-06-01T18:56:47,133 Initialized build tracking at /tmp/pip-build-tracker-z05w6__t 2026-06-01T18:56:47,133 Created build tracker: /tmp/pip-build-tracker-z05w6__t 2026-06-01T18:56:47,134 Entered build tracker: /tmp/pip-build-tracker-z05w6__t 2026-06-01T18:56:47,135 Created temporary directory: /tmp/pip-wheel-6d6chk7i 2026-06-01T18:56:47,138 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-06-01T18:56:47,140 Created temporary directory: /tmp/pip-ephem-wheel-cache-w1yh_t2p 2026-06-01T18:56:47,162 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-06-01T18:56:47,166 2 location(s) to search for versions of vivarium-artifact: 2026-06-01T18:56:47,166 * https://pypi.org/simple/vivarium-artifact/ 2026-06-01T18:56:47,166 * https://www.piwheels.org/simple/vivarium-artifact/ 2026-06-01T18:56:47,167 Fetching project page and analyzing links: https://pypi.org/simple/vivarium-artifact/ 2026-06-01T18:56:47,168 Getting page https://pypi.org/simple/vivarium-artifact/ 2026-06-01T18:56:47,169 Found index url https://pypi.org/simple 2026-06-01T18:56:47,401 Fetched page https://pypi.org/simple/vivarium-artifact/ as application/vnd.pypi.simple.v1+json 2026-06-01T18:56:47,403 Skipping link: No binaries permitted for vivarium-artifact: https://files.pythonhosted.org/packages/ec/eb/55d6a2207114fba503180e4cc6146f89c66adfdbe7207e171f4bd486cfc2/vivarium_artifact-1.0.0-py3-none-any.whl (from https://pypi.org/simple/vivarium-artifact/) (requires-python:>=3.10) 2026-06-01T18:56:47,404 Found link https://files.pythonhosted.org/packages/c9/db/5b676fd35a5129eb2c1b144843f047a73eadceb3271475459890fd6c885e/vivarium_artifact-1.0.0.tar.gz (from https://pypi.org/simple/vivarium-artifact/) (requires-python:>=3.10), version: 1.0.0 2026-06-01T18:56:47,405 Skipping link: No binaries permitted for vivarium-artifact: https://files.pythonhosted.org/packages/93/13/88b5d6ff9eed5c56df1364da1214e928de50a0d367ce570c4cf320c1b8d5/vivarium_artifact-1.0.1-py3-none-any.whl (from https://pypi.org/simple/vivarium-artifact/) (requires-python:>=3.10) 2026-06-01T18:56:47,406 Found link https://files.pythonhosted.org/packages/94/03/4219cb91d104a817db45676d0a5c5c621fa23b0aa22c21d8b868b3e61190/vivarium_artifact-1.0.1.tar.gz (from https://pypi.org/simple/vivarium-artifact/) (requires-python:>=3.10), version: 1.0.1 2026-06-01T18:56:47,407 Fetching project page and analyzing links: https://www.piwheels.org/simple/vivarium-artifact/ 2026-06-01T18:56:47,407 Getting page https://www.piwheels.org/simple/vivarium-artifact/ 2026-06-01T18:56:47,409 Found index url https://www.piwheels.org/simple 2026-06-01T18:56:47,585 Fetched page https://www.piwheels.org/simple/vivarium-artifact/ as text/html 2026-06-01T18:56:47,586 Skipping link: No binaries permitted for vivarium-artifact: https://www.piwheels.org/simple/vivarium-artifact/vivarium_artifact-1.0.0-py3-none-any.whl#sha256=80a81f9ab5524054a26d39c4c5f820dedc6923f66b05b1e1d5943742d791e8be (from https://www.piwheels.org/simple/vivarium-artifact/) (requires-python:>=3.10) 2026-06-01T18:56:47,587 Skipping link: not a file: https://www.piwheels.org/simple/vivarium-artifact/ 2026-06-01T18:56:47,588 Skipping link: not a file: https://pypi.org/simple/vivarium-artifact/ 2026-06-01T18:56:47,607 Given no hashes to check 1 links for project 'vivarium-artifact': discarding no candidates 2026-06-01T18:56:47,625 Collecting vivarium-artifact==1.0.1 2026-06-01T18:56:47,627 Created temporary directory: /tmp/pip-unpack-nd6bwedg 2026-06-01T18:56:47,782 Downloading vivarium_artifact-1.0.1.tar.gz (409 kB) 2026-06-01T18:56:48,021 Added vivarium-artifact==1.0.1 from https://files.pythonhosted.org/packages/94/03/4219cb91d104a817db45676d0a5c5c621fa23b0aa22c21d8b868b3e61190/vivarium_artifact-1.0.1.tar.gz to build tracker '/tmp/pip-build-tracker-z05w6__t' 2026-06-01T18:56:48,028 Created temporary directory: /tmp/pip-build-env-d7_prs04 2026-06-01T18:56:48,033 Installing build dependencies: started 2026-06-01T18:56:48,034 Running command pip subprocess to install build dependencies 2026-06-01T18:56:49,175 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-06-01T18:56:49,616 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-06-01T18:56:49,640 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-06-01T18:56:51,435 Collecting setuptools>=61.0 2026-06-01T18:56:51,436 Obtaining dependency information for setuptools>=61.0 from https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl.metadata 2026-06-01T18:56:51,450 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl.metadata (6.5 kB) 2026-06-01T18:56:51,796 Collecting setuptools_scm[toml]>=8.0 2026-06-01T18:56:51,797 Obtaining dependency information for setuptools_scm[toml]>=8.0 from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl.metadata 2026-06-01T18:56:51,813 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl.metadata (6.5 kB) 2026-06-01T18:56:51,823 Discarding https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl#sha256=600c37b3fea2bb517f59d76792adae856d0b5ce7735b186e4cde804375251321 (from https://www.piwheels.org/simple/setuptools-scm/) (requires-python:>=3.10): Requested setuptools_scm>=8.0 from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl#sha256=600c37b3fea2bb517f59d76792adae856d0b5ce7735b186e4cde804375251321 has inconsistent Name: expected 'setuptools_scm', but metadata has 'setuptools-scm' 2026-06-01T18:56:51,847 Using cached setuptools_scm-10.0.5-py3-none-any.whl (21 kB) 2026-06-01T18:56:51,932 Collecting vcs-versioning>=1.0.0.dev0 2026-06-01T18:56:51,933 Obtaining dependency information for vcs-versioning>=1.0.0.dev0 from https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl.metadata 2026-06-01T18:56:51,946 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl.metadata (1.6 kB) 2026-06-01T18:56:52,132 Collecting packaging>=20 2026-06-01T18:56:52,133 Obtaining dependency information for packaging>=20 from https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata 2026-06-01T18:56:52,147 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata (3.5 kB) 2026-06-01T18:56:52,365 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB) 2026-06-01T18:56:52,384 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl (79 kB) 2026-06-01T18:56:52,474 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-06-01T18:56:52,510 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB) 2026-06-01T18:56:52,537 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl (79 kB) 2026-06-01T18:56:52,621 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-06-01T18:56:55,382 Installing collected packages: setuptools, packaging, vcs-versioning, setuptools_scm 2026-06-01T18:56:59,079 Creating /tmp/pip-build-env-d7_prs04/overlay/local/bin 2026-06-01T18:56:59,081 changing mode of /tmp/pip-build-env-d7_prs04/overlay/local/bin/vcs-versioning to 755 2026-06-01T18:56:59,189 changing mode of /tmp/pip-build-env-d7_prs04/overlay/local/bin/setuptools-scm to 755 2026-06-01T18:56:59,216 Successfully installed packaging-26.2 setuptools-82.0.1 setuptools_scm-10.0.5 vcs-versioning-1.1.1 2026-06-01T18:56:59,511 Installing build dependencies: finished with status 'done' 2026-06-01T18:56:59,517 Getting requirements to build wheel: started 2026-06-01T18:56:59,518 Running command Getting requirements to build wheel 2026-06-01T18:57:00,271 /tmp/pip-build-env-d7_prs04/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-06-01T18:57:00,271 !! 2026-06-01T18:57:00,272 ******************************************************************************** 2026-06-01T18:57:00,273 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-06-01T18:57:00,274 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-06-01T18:57:00,274 or your builds will no longer be supported. 2026-06-01T18:57:00,275 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-06-01T18:57:00,276 ******************************************************************************** 2026-06-01T18:57:00,277 !! 2026-06-01T18:57:00,277 corresp(dist, value, root_dir) 2026-06-01T18:57:00,365 running egg_info 2026-06-01T18:57:00,373 writing src/vivarium_artifact.egg-info/PKG-INFO 2026-06-01T18:57:00,379 writing dependency_links to src/vivarium_artifact.egg-info/dependency_links.txt 2026-06-01T18:57:00,383 writing requirements to src/vivarium_artifact.egg-info/requires.txt 2026-06-01T18:57:00,384 writing top-level names to src/vivarium_artifact.egg-info/top_level.txt 2026-06-01T18:57:00,420 /tmp/pip-build-env-d7_prs04/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-06-01T18:57:00,420 return get_active_overrides().subprocess_timeout 2026-06-01T18:57:00,429 listing git files failed - pretending there aren't any 2026-06-01T18:57:00,435 reading manifest file 'src/vivarium_artifact.egg-info/SOURCES.txt' 2026-06-01T18:57:00,440 adding license file 'LICENSE' 2026-06-01T18:57:00,444 writing manifest file 'src/vivarium_artifact.egg-info/SOURCES.txt' 2026-06-01T18:57:00,550 Getting requirements to build wheel: finished with status 'done' 2026-06-01T18:57:00,554 Created temporary directory: /tmp/pip-modern-metadata-hriv_3vi 2026-06-01T18:57:00,557 Preparing metadata (pyproject.toml): started 2026-06-01T18:57:00,558 Running command Preparing metadata (pyproject.toml) 2026-06-01T18:57:01,221 /tmp/pip-build-env-d7_prs04/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-06-01T18:57:01,221 !! 2026-06-01T18:57:01,222 ******************************************************************************** 2026-06-01T18:57:01,223 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-06-01T18:57:01,224 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-06-01T18:57:01,225 or your builds will no longer be supported. 2026-06-01T18:57:01,226 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-06-01T18:57:01,226 ******************************************************************************** 2026-06-01T18:57:01,228 !! 2026-06-01T18:57:01,228 corresp(dist, value, root_dir) 2026-06-01T18:57:01,304 running dist_info 2026-06-01T18:57:01,318 creating /tmp/pip-modern-metadata-hriv_3vi/vivarium_artifact.egg-info 2026-06-01T18:57:01,319 writing /tmp/pip-modern-metadata-hriv_3vi/vivarium_artifact.egg-info/PKG-INFO 2026-06-01T18:57:01,324 writing dependency_links to /tmp/pip-modern-metadata-hriv_3vi/vivarium_artifact.egg-info/dependency_links.txt 2026-06-01T18:57:01,327 writing requirements to /tmp/pip-modern-metadata-hriv_3vi/vivarium_artifact.egg-info/requires.txt 2026-06-01T18:57:01,328 writing top-level names to /tmp/pip-modern-metadata-hriv_3vi/vivarium_artifact.egg-info/top_level.txt 2026-06-01T18:57:01,330 writing manifest file '/tmp/pip-modern-metadata-hriv_3vi/vivarium_artifact.egg-info/SOURCES.txt' 2026-06-01T18:57:01,361 /tmp/pip-build-env-d7_prs04/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-06-01T18:57:01,362 return get_active_overrides().subprocess_timeout 2026-06-01T18:57:01,368 listing git files failed - pretending there aren't any 2026-06-01T18:57:01,372 reading manifest file '/tmp/pip-modern-metadata-hriv_3vi/vivarium_artifact.egg-info/SOURCES.txt' 2026-06-01T18:57:01,374 adding license file 'LICENSE' 2026-06-01T18:57:01,377 writing manifest file '/tmp/pip-modern-metadata-hriv_3vi/vivarium_artifact.egg-info/SOURCES.txt' 2026-06-01T18:57:01,378 creating '/tmp/pip-modern-metadata-hriv_3vi/vivarium_artifact-1.0.1.dist-info' 2026-06-01T18:57:01,510 Preparing metadata (pyproject.toml): finished with status 'done' 2026-06-01T18:57:01,514 Source in /tmp/pip-wheel-6d6chk7i/vivarium-artifact_586241069ce243d7b1a7bbb296d904f1 has version 1.0.1, which satisfies requirement vivarium-artifact==1.0.1 from https://files.pythonhosted.org/packages/94/03/4219cb91d104a817db45676d0a5c5c621fa23b0aa22c21d8b868b3e61190/vivarium_artifact-1.0.1.tar.gz 2026-06-01T18:57:01,516 Removed vivarium-artifact==1.0.1 from https://files.pythonhosted.org/packages/94/03/4219cb91d104a817db45676d0a5c5c621fa23b0aa22c21d8b868b3e61190/vivarium_artifact-1.0.1.tar.gz from build tracker '/tmp/pip-build-tracker-z05w6__t' 2026-06-01T18:57:01,521 Created temporary directory: /tmp/pip-unpack-p9tttvc_ 2026-06-01T18:57:01,522 Building wheels for collected packages: vivarium-artifact 2026-06-01T18:57:01,527 Created temporary directory: /tmp/pip-wheel-h1uhdao1 2026-06-01T18:57:01,527 Destination directory: /tmp/pip-wheel-h1uhdao1 2026-06-01T18:57:01,530 Building wheel for vivarium-artifact (pyproject.toml): started 2026-06-01T18:57:01,531 Running command Building wheel for vivarium-artifact (pyproject.toml) 2026-06-01T18:57:02,208 /tmp/pip-build-env-d7_prs04/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-06-01T18:57:02,208 !! 2026-06-01T18:57:02,209 ******************************************************************************** 2026-06-01T18:57:02,210 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-06-01T18:57:02,211 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-06-01T18:57:02,211 or your builds will no longer be supported. 2026-06-01T18:57:02,212 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-06-01T18:57:02,213 ******************************************************************************** 2026-06-01T18:57:02,214 !! 2026-06-01T18:57:02,215 corresp(dist, value, root_dir) 2026-06-01T18:57:02,280 running bdist_wheel 2026-06-01T18:57:02,305 running build 2026-06-01T18:57:02,306 running build_py 2026-06-01T18:57:02,308 creating build/lib/vivarium/artifact 2026-06-01T18:57:02,311 copying src/vivarium/artifact/__init__.py -> build/lib/vivarium/artifact 2026-06-01T18:57:02,313 copying src/vivarium/artifact/artifact.py -> build/lib/vivarium/artifact 2026-06-01T18:57:02,315 copying src/vivarium/artifact/hdf.py -> build/lib/vivarium/artifact 2026-06-01T18:57:02,318 running egg_info 2026-06-01T18:57:02,331 writing src/vivarium_artifact.egg-info/PKG-INFO 2026-06-01T18:57:02,336 writing dependency_links to src/vivarium_artifact.egg-info/dependency_links.txt 2026-06-01T18:57:02,339 writing requirements to src/vivarium_artifact.egg-info/requires.txt 2026-06-01T18:57:02,340 writing top-level names to src/vivarium_artifact.egg-info/top_level.txt 2026-06-01T18:57:02,367 /tmp/pip-build-env-d7_prs04/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-06-01T18:57:02,368 return get_active_overrides().subprocess_timeout 2026-06-01T18:57:02,375 listing git files failed - pretending there aren't any 2026-06-01T18:57:02,379 reading manifest file 'src/vivarium_artifact.egg-info/SOURCES.txt' 2026-06-01T18:57:02,382 adding license file 'LICENSE' 2026-06-01T18:57:02,386 writing manifest file 'src/vivarium_artifact.egg-info/SOURCES.txt' 2026-06-01T18:57:02,389 copying src/vivarium/artifact/py.typed -> build/lib/vivarium/artifact 2026-06-01T18:57:02,404 installing to build/bdist.linux-armv7l/wheel 2026-06-01T18:57:02,405 running install 2026-06-01T18:57:02,428 running install_lib 2026-06-01T18:57:02,435 creating build/bdist.linux-armv7l/wheel 2026-06-01T18:57:02,438 creating build/bdist.linux-armv7l/wheel/vivarium 2026-06-01T18:57:02,440 creating build/bdist.linux-armv7l/wheel/vivarium/artifact 2026-06-01T18:57:02,441 copying build/lib/vivarium/artifact/py.typed -> build/bdist.linux-armv7l/wheel/./vivarium/artifact 2026-06-01T18:57:02,443 copying build/lib/vivarium/artifact/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/artifact 2026-06-01T18:57:02,445 copying build/lib/vivarium/artifact/artifact.py -> build/bdist.linux-armv7l/wheel/./vivarium/artifact 2026-06-01T18:57:02,448 copying build/lib/vivarium/artifact/hdf.py -> build/bdist.linux-armv7l/wheel/./vivarium/artifact 2026-06-01T18:57:02,450 running install_egg_info 2026-06-01T18:57:02,457 Copying src/vivarium_artifact.egg-info to build/bdist.linux-armv7l/wheel/./vivarium_artifact-1.0.1-py3.11.egg-info 2026-06-01T18:57:02,469 running install_scripts 2026-06-01T18:57:02,481 creating build/bdist.linux-armv7l/wheel/vivarium_artifact-1.0.1.dist-info/WHEEL 2026-06-01T18:57:02,484 creating '/tmp/pip-wheel-h1uhdao1/.tmp-jnc096bv/vivarium_artifact-1.0.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-06-01T18:57:02,487 adding 'vivarium/artifact/__init__.py' 2026-06-01T18:57:02,490 adding 'vivarium/artifact/artifact.py' 2026-06-01T18:57:02,492 adding 'vivarium/artifact/hdf.py' 2026-06-01T18:57:02,493 adding 'vivarium/artifact/py.typed' 2026-06-01T18:57:02,496 adding 'vivarium_artifact-1.0.1.dist-info/licenses/LICENSE' 2026-06-01T18:57:02,498 adding 'vivarium_artifact-1.0.1.dist-info/METADATA' 2026-06-01T18:57:02,499 adding 'vivarium_artifact-1.0.1.dist-info/WHEEL' 2026-06-01T18:57:02,500 adding 'vivarium_artifact-1.0.1.dist-info/top_level.txt' 2026-06-01T18:57:02,501 adding 'vivarium_artifact-1.0.1.dist-info/RECORD' 2026-06-01T18:57:02,502 removing build/bdist.linux-armv7l/wheel 2026-06-01T18:57:02,613 Building wheel for vivarium-artifact (pyproject.toml): finished with status 'done' 2026-06-01T18:57:02,618 Created wheel for vivarium-artifact: filename=vivarium_artifact-1.0.1-py3-none-any.whl size=11168 sha256=fb4536b78912fef6098fd5300b63a96e70bddc959d54b06f1f3d3be9a08bb2a1 2026-06-01T18:57:02,620 Stored in directory: /tmp/pip-ephem-wheel-cache-w1yh_t2p/wheels/71/b5/90/55458eb62faf788e2dfb36dfb4890c5340fc1e80f93027fcbd 2026-06-01T18:57:02,631 Successfully built vivarium-artifact 2026-06-01T18:57:02,634 Removed build tracker: '/tmp/pip-build-tracker-z05w6__t'