2026-06-06T00:06:30,026 Created temporary directory: /tmp/pip-ephem-wheel-cache-mozangsw 2026-06-06T00:06:30,028 Created temporary directory: /tmp/pip-build-tracker-jowiu3qf 2026-06-06T00:06:30,029 Initialized build tracking at /tmp/pip-build-tracker-jowiu3qf 2026-06-06T00:06:30,029 Created build tracker: /tmp/pip-build-tracker-jowiu3qf 2026-06-06T00:06:30,030 Entered build tracker: /tmp/pip-build-tracker-jowiu3qf 2026-06-06T00:06:30,030 Created temporary directory: /tmp/pip-wheel-i1_97ahm 2026-06-06T00:06:30,033 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-06-06T00:06:30,036 Created temporary directory: /tmp/pip-ephem-wheel-cache-aal7abie 2026-06-06T00:06:30,058 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-06-06T00:06:30,061 2 location(s) to search for versions of spt-pipeline: 2026-06-06T00:06:30,061 * https://pypi.org/simple/spt-pipeline/ 2026-06-06T00:06:30,061 * https://www.piwheels.org/simple/spt-pipeline/ 2026-06-06T00:06:30,062 Fetching project page and analyzing links: https://pypi.org/simple/spt-pipeline/ 2026-06-06T00:06:30,063 Getting page https://pypi.org/simple/spt-pipeline/ 2026-06-06T00:06:30,064 Found index url https://pypi.org/simple 2026-06-06T00:06:30,214 Fetched page https://pypi.org/simple/spt-pipeline/ as application/vnd.pypi.simple.v1+json 2026-06-06T00:06:30,216 Skipping link: No binaries permitted for spt-pipeline: https://files.pythonhosted.org/packages/02/51/68a602710d51c3ee777e01344be2afcbfb5edf3698591f1b2d7e147f7588/spt_pipeline-0.1.1-py3-none-any.whl (from https://pypi.org/simple/spt-pipeline/) (requires-python:>=3.10) 2026-06-06T00:06:30,217 Found link https://files.pythonhosted.org/packages/bb/e8/678f452af9204b47647b7051558460efc56346c12e506cd03918873a3085/spt_pipeline-0.1.1.tar.gz (from https://pypi.org/simple/spt-pipeline/) (requires-python:>=3.10), version: 0.1.1 2026-06-06T00:06:30,218 Fetching project page and analyzing links: https://www.piwheels.org/simple/spt-pipeline/ 2026-06-06T00:06:30,219 Getting page https://www.piwheels.org/simple/spt-pipeline/ 2026-06-06T00:06:30,220 Found index url https://www.piwheels.org/simple 2026-06-06T00:06:30,392 Fetched page https://www.piwheels.org/simple/spt-pipeline/ as text/html 2026-06-06T00:06:30,393 Skipping link: not a file: https://www.piwheels.org/simple/spt-pipeline/ 2026-06-06T00:06:30,394 Skipping link: not a file: https://pypi.org/simple/spt-pipeline/ 2026-06-06T00:06:30,413 Given no hashes to check 1 links for project 'spt-pipeline': discarding no candidates 2026-06-06T00:06:30,430 Collecting spt-pipeline==0.1.1 2026-06-06T00:06:30,432 Created temporary directory: /tmp/pip-unpack-pq_2cm7i 2026-06-06T00:06:30,662 Downloading spt_pipeline-0.1.1.tar.gz (151 kB) 2026-06-06T00:06:30,810 Added spt-pipeline==0.1.1 from https://files.pythonhosted.org/packages/bb/e8/678f452af9204b47647b7051558460efc56346c12e506cd03918873a3085/spt_pipeline-0.1.1.tar.gz to build tracker '/tmp/pip-build-tracker-jowiu3qf' 2026-06-06T00:06:30,816 Created temporary directory: /tmp/pip-build-env-pkah49oo 2026-06-06T00:06:30,821 Installing build dependencies: started 2026-06-06T00:06:30,822 Running command pip subprocess to install build dependencies 2026-06-06T00:06:31,972 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-06-06T00:06:32,381 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-06-06T00:06:32,407 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-06-06T00:06:34,181 Collecting setuptools>=68 2026-06-06T00:06:34,183 Obtaining dependency information for setuptools>=68 from https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl.metadata 2026-06-06T00:06:34,197 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl.metadata (6.5 kB) 2026-06-06T00:06:34,431 Collecting wheel 2026-06-06T00:06:34,433 Obtaining dependency information for wheel from https://www.piwheels.org/simple/wheel/wheel-0.47.0-py3-none-any.whl.metadata 2026-06-06T00:06:34,446 Using cached https://www.piwheels.org/simple/wheel/wheel-0.47.0-py3-none-any.whl.metadata (2.3 kB) 2026-06-06T00:06:34,626 Collecting packaging>=24.0 2026-06-06T00:06:34,627 Obtaining dependency information for packaging>=24.0 from https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata 2026-06-06T00:06:34,640 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata (3.5 kB) 2026-06-06T00:06:34,828 Using cached https://www.piwheels.org/simple/wheel/wheel-0.47.0-py3-none-any.whl (32 kB) 2026-06-06T00:06:34,847 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB) 2026-06-06T00:06:34,943 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-06-06T00:06:34,978 Using cached https://www.piwheels.org/simple/wheel/wheel-0.47.0-py3-none-any.whl (32 kB) 2026-06-06T00:06:35,004 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB) 2026-06-06T00:06:35,091 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-06-06T00:06:37,822 Installing collected packages: setuptools, packaging, wheel 2026-06-06T00:06:41,634 Creating /tmp/pip-build-env-pkah49oo/overlay/local/bin 2026-06-06T00:06:41,636 changing mode of /tmp/pip-build-env-pkah49oo/overlay/local/bin/wheel to 755 2026-06-06T00:06:41,658 Successfully installed packaging-26.2 setuptools-82.0.1 wheel-0.47.0 2026-06-06T00:06:41,946 Installing build dependencies: finished with status 'done' 2026-06-06T00:06:41,952 Getting requirements to build wheel: started 2026-06-06T00:06:41,953 Running command Getting requirements to build wheel 2026-06-06T00:06:42,702 running egg_info 2026-06-06T00:06:42,707 writing src/spt_pipeline.egg-info/PKG-INFO 2026-06-06T00:06:42,715 writing dependency_links to src/spt_pipeline.egg-info/dependency_links.txt 2026-06-06T00:06:42,717 writing entry points to src/spt_pipeline.egg-info/entry_points.txt 2026-06-06T00:06:42,721 writing requirements to src/spt_pipeline.egg-info/requires.txt 2026-06-06T00:06:42,722 writing top-level names to src/spt_pipeline.egg-info/top_level.txt 2026-06-06T00:06:42,741 reading manifest file 'src/spt_pipeline.egg-info/SOURCES.txt' 2026-06-06T00:06:42,744 reading manifest template 'MANIFEST.in' 2026-06-06T00:06:42,746 warning: no previously-included files matching '__pycache__' found under directory '*' 2026-06-06T00:06:42,747 warning: no previously-included files matching '*.py[cod]' found under directory '*' 2026-06-06T00:06:42,748 warning: no previously-included files matching '.DS_Store' found under directory '*' 2026-06-06T00:06:42,748 adding license file 'LICENSE' 2026-06-06T00:06:42,751 writing manifest file 'src/spt_pipeline.egg-info/SOURCES.txt' 2026-06-06T00:06:42,849 Getting requirements to build wheel: finished with status 'done' 2026-06-06T00:06:42,853 Created temporary directory: /tmp/pip-modern-metadata-dux7l794 2026-06-06T00:06:42,855 Preparing metadata (pyproject.toml): started 2026-06-06T00:06:42,856 Running command Preparing metadata (pyproject.toml) 2026-06-06T00:06:43,504 running dist_info 2026-06-06T00:06:43,515 creating /tmp/pip-modern-metadata-dux7l794/spt_pipeline.egg-info 2026-06-06T00:06:43,516 writing /tmp/pip-modern-metadata-dux7l794/spt_pipeline.egg-info/PKG-INFO 2026-06-06T00:06:43,525 writing dependency_links to /tmp/pip-modern-metadata-dux7l794/spt_pipeline.egg-info/dependency_links.txt 2026-06-06T00:06:43,527 writing entry points to /tmp/pip-modern-metadata-dux7l794/spt_pipeline.egg-info/entry_points.txt 2026-06-06T00:06:43,531 writing requirements to /tmp/pip-modern-metadata-dux7l794/spt_pipeline.egg-info/requires.txt 2026-06-06T00:06:43,532 writing top-level names to /tmp/pip-modern-metadata-dux7l794/spt_pipeline.egg-info/top_level.txt 2026-06-06T00:06:43,533 writing manifest file '/tmp/pip-modern-metadata-dux7l794/spt_pipeline.egg-info/SOURCES.txt' 2026-06-06T00:06:43,550 reading manifest file '/tmp/pip-modern-metadata-dux7l794/spt_pipeline.egg-info/SOURCES.txt' 2026-06-06T00:06:43,552 reading manifest template 'MANIFEST.in' 2026-06-06T00:06:43,553 warning: no previously-included files matching '__pycache__' found under directory '*' 2026-06-06T00:06:43,554 warning: no previously-included files matching '*.py[cod]' found under directory '*' 2026-06-06T00:06:43,555 warning: no previously-included files matching '.DS_Store' found under directory '*' 2026-06-06T00:06:43,556 adding license file 'LICENSE' 2026-06-06T00:06:43,558 writing manifest file '/tmp/pip-modern-metadata-dux7l794/spt_pipeline.egg-info/SOURCES.txt' 2026-06-06T00:06:43,559 creating '/tmp/pip-modern-metadata-dux7l794/spt_pipeline-0.1.1.dist-info' 2026-06-06T00:06:43,686 Preparing metadata (pyproject.toml): finished with status 'done' 2026-06-06T00:06:43,691 Source in /tmp/pip-wheel-i1_97ahm/spt-pipeline_b91551757ed24c0e9e7287f64f2b5adb has version 0.1.1, which satisfies requirement spt-pipeline==0.1.1 from https://files.pythonhosted.org/packages/bb/e8/678f452af9204b47647b7051558460efc56346c12e506cd03918873a3085/spt_pipeline-0.1.1.tar.gz 2026-06-06T00:06:43,692 Removed spt-pipeline==0.1.1 from https://files.pythonhosted.org/packages/bb/e8/678f452af9204b47647b7051558460efc56346c12e506cd03918873a3085/spt_pipeline-0.1.1.tar.gz from build tracker '/tmp/pip-build-tracker-jowiu3qf' 2026-06-06T00:06:43,701 Created temporary directory: /tmp/pip-unpack-25x7vjve 2026-06-06T00:06:43,701 Building wheels for collected packages: spt-pipeline 2026-06-06T00:06:43,706 Created temporary directory: /tmp/pip-wheel-r531uqfh 2026-06-06T00:06:43,706 Destination directory: /tmp/pip-wheel-r531uqfh 2026-06-06T00:06:43,708 Building wheel for spt-pipeline (pyproject.toml): started 2026-06-06T00:06:43,710 Running command Building wheel for spt-pipeline (pyproject.toml) 2026-06-06T00:06:44,334 running bdist_wheel 2026-06-06T00:06:44,351 running build 2026-06-06T00:06:44,352 running build_py 2026-06-06T00:06:44,358 creating build/lib/spt_pipeline 2026-06-06T00:06:44,360 copying src/spt_pipeline/colocalization.py -> build/lib/spt_pipeline 2026-06-06T00:06:44,364 copying src/spt_pipeline/pipeline_fraction_bins_compare_tau.py -> build/lib/spt_pipeline 2026-06-06T00:06:44,370 copying src/spt_pipeline/__init__.py -> build/lib/spt_pipeline 2026-06-06T00:06:44,372 copying src/spt_pipeline/pipeline.py -> build/lib/spt_pipeline 2026-06-06T00:06:44,378 copying src/spt_pipeline/metadata.py -> build/lib/spt_pipeline 2026-06-06T00:06:44,381 copying src/spt_pipeline/aligned_trajectories.py -> build/lib/spt_pipeline 2026-06-06T00:06:44,383 running egg_info 2026-06-06T00:06:44,393 writing src/spt_pipeline.egg-info/PKG-INFO 2026-06-06T00:06:44,400 writing dependency_links to src/spt_pipeline.egg-info/dependency_links.txt 2026-06-06T00:06:44,402 writing entry points to src/spt_pipeline.egg-info/entry_points.txt 2026-06-06T00:06:44,406 writing requirements to src/spt_pipeline.egg-info/requires.txt 2026-06-06T00:06:44,407 writing top-level names to src/spt_pipeline.egg-info/top_level.txt 2026-06-06T00:06:44,417 reading manifest file 'src/spt_pipeline.egg-info/SOURCES.txt' 2026-06-06T00:06:44,419 reading manifest template 'MANIFEST.in' 2026-06-06T00:06:44,421 warning: no previously-included files matching '__pycache__' found under directory '*' 2026-06-06T00:06:44,422 warning: no previously-included files matching '*.py[cod]' found under directory '*' 2026-06-06T00:06:44,423 warning: no previously-included files matching '.DS_Store' found under directory '*' 2026-06-06T00:06:44,424 adding license file 'LICENSE' 2026-06-06T00:06:44,427 writing manifest file 'src/spt_pipeline.egg-info/SOURCES.txt' 2026-06-06T00:06:44,438 installing to build/bdist.linux-armv7l/wheel 2026-06-06T00:06:44,439 running install 2026-06-06T00:06:44,462 running install_lib 2026-06-06T00:06:44,468 creating build/bdist.linux-armv7l/wheel 2026-06-06T00:06:44,470 creating build/bdist.linux-armv7l/wheel/spt_pipeline 2026-06-06T00:06:44,472 copying build/lib/spt_pipeline/colocalization.py -> build/bdist.linux-armv7l/wheel/./spt_pipeline 2026-06-06T00:06:44,475 copying build/lib/spt_pipeline/pipeline_fraction_bins_compare_tau.py -> build/bdist.linux-armv7l/wheel/./spt_pipeline 2026-06-06T00:06:44,483 copying build/lib/spt_pipeline/__init__.py -> build/bdist.linux-armv7l/wheel/./spt_pipeline 2026-06-06T00:06:44,485 copying build/lib/spt_pipeline/pipeline.py -> build/bdist.linux-armv7l/wheel/./spt_pipeline 2026-06-06T00:06:44,490 copying build/lib/spt_pipeline/metadata.py -> build/bdist.linux-armv7l/wheel/./spt_pipeline 2026-06-06T00:06:44,494 copying build/lib/spt_pipeline/aligned_trajectories.py -> build/bdist.linux-armv7l/wheel/./spt_pipeline 2026-06-06T00:06:44,496 running install_egg_info 2026-06-06T00:06:44,501 Copying src/spt_pipeline.egg-info to build/bdist.linux-armv7l/wheel/./spt_pipeline-0.1.1-py3.11.egg-info 2026-06-06T00:06:44,516 running install_scripts 2026-06-06T00:06:44,529 creating build/bdist.linux-armv7l/wheel/spt_pipeline-0.1.1.dist-info/WHEEL 2026-06-06T00:06:44,532 creating '/tmp/pip-wheel-r531uqfh/.tmp-663s9zfd/spt_pipeline-0.1.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-06-06T00:06:44,534 adding 'spt_pipeline/__init__.py' 2026-06-06T00:06:44,538 adding 'spt_pipeline/aligned_trajectories.py' 2026-06-06T00:06:44,543 adding 'spt_pipeline/colocalization.py' 2026-06-06T00:06:44,546 adding 'spt_pipeline/metadata.py' 2026-06-06T00:06:44,575 adding 'spt_pipeline/pipeline.py' 2026-06-06T00:06:44,607 adding 'spt_pipeline/pipeline_fraction_bins_compare_tau.py' 2026-06-06T00:06:44,612 adding 'spt_pipeline-0.1.1.dist-info/licenses/LICENSE' 2026-06-06T00:06:44,615 adding 'spt_pipeline-0.1.1.dist-info/METADATA' 2026-06-06T00:06:44,617 adding 'spt_pipeline-0.1.1.dist-info/WHEEL' 2026-06-06T00:06:44,618 adding 'spt_pipeline-0.1.1.dist-info/entry_points.txt' 2026-06-06T00:06:44,619 adding 'spt_pipeline-0.1.1.dist-info/top_level.txt' 2026-06-06T00:06:44,620 adding 'spt_pipeline-0.1.1.dist-info/RECORD' 2026-06-06T00:06:44,623 removing build/bdist.linux-armv7l/wheel 2026-06-06T00:06:44,727 Building wheel for spt-pipeline (pyproject.toml): finished with status 'done' 2026-06-06T00:06:44,734 Created wheel for spt-pipeline: filename=spt_pipeline-0.1.1-py3-none-any.whl size=145390 sha256=c39dcdc25c9374ee12389382b8d334e57662f7c5c697457e12021e49a1a67e01 2026-06-06T00:06:44,736 Stored in directory: /tmp/pip-ephem-wheel-cache-aal7abie/wheels/27/9c/12/a92283a7acfa118b3c5ecccb1724b55a7fd56bd3a1473ba18b 2026-06-06T00:06:44,751 Successfully built spt-pipeline 2026-06-06T00:06:44,758 Removed build tracker: '/tmp/pip-build-tracker-jowiu3qf'