2026-06-06T23:52:48,596 Created temporary directory: /tmp/pip-ephem-wheel-cache-mvy9vv65 2026-06-06T23:52:48,598 Created temporary directory: /tmp/pip-build-tracker-wnsmef4n 2026-06-06T23:52:48,598 Initialized build tracking at /tmp/pip-build-tracker-wnsmef4n 2026-06-06T23:52:48,599 Created build tracker: /tmp/pip-build-tracker-wnsmef4n 2026-06-06T23:52:48,599 Entered build tracker: /tmp/pip-build-tracker-wnsmef4n 2026-06-06T23:52:48,600 Created temporary directory: /tmp/pip-wheel-hhd47lv2 2026-06-06T23:52:48,603 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-06-06T23:52:48,606 Created temporary directory: /tmp/pip-ephem-wheel-cache-9179mp5o 2026-06-06T23:52:48,629 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-06-06T23:52:48,633 2 location(s) to search for versions of niwrap-freesurfer: 2026-06-06T23:52:48,633 * https://pypi.org/simple/niwrap-freesurfer/ 2026-06-06T23:52:48,633 * https://www.piwheels.org/simple/niwrap-freesurfer/ 2026-06-06T23:52:48,634 Fetching project page and analyzing links: https://pypi.org/simple/niwrap-freesurfer/ 2026-06-06T23:52:48,635 Getting page https://pypi.org/simple/niwrap-freesurfer/ 2026-06-06T23:52:48,636 Found index url https://pypi.org/simple 2026-06-06T23:52:48,880 Fetched page https://pypi.org/simple/niwrap-freesurfer/ as application/vnd.pypi.simple.v1+json 2026-06-06T23:52:48,892 Skipping link: No binaries permitted for niwrap-freesurfer: 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https://files.pythonhosted.org/packages/86/59/08f4defe40e8b9f3ae94bcbd8b91e256c7bfe194fe1cbb89638ea2ac4a54/niwrap_freesurfer-1.0.1.tar.gz (from https://pypi.org/simple/niwrap-freesurfer/) (requires-python:>=3.10), version: 1.0.1 2026-06-06T23:52:48,940 Fetching project page and analyzing links: https://www.piwheels.org/simple/niwrap-freesurfer/ 2026-06-06T23:52:48,941 Getting page https://www.piwheels.org/simple/niwrap-freesurfer/ 2026-06-06T23:52:48,942 Found index url https://www.piwheels.org/simple 2026-06-06T23:52:49,138 Fetched page https://www.piwheels.org/simple/niwrap-freesurfer/ as text/html 2026-06-06T23:52:49,147 Skipping link: No binaries permitted for niwrap-freesurfer: https://www.piwheels.org/simple/niwrap-freesurfer/niwrap_freesurfer-1.0.0-py3-none-any.whl#sha256=fce30a6f9491a94e28eaed12312f570ebd9147d3c6a2ba0b338ea3a1e5b3c18c (from https://www.piwheels.org/simple/niwrap-freesurfer/) (requires-python:>=3.10) 2026-06-06T23:52:49,148 Skipping link: No binaries permitted for niwrap-freesurfer: https://archive1.piwheels.org/simple/niwrap-freesurfer/niwrap_freesurfer-0.9.3-py3-none-any.whl#sha256=6ddf3ea3b67cfec435f438fb3dd061ebdc2a298ceca5f316f9d9368f6fd8c654 (from https://www.piwheels.org/simple/niwrap-freesurfer/) (requires-python:>=3.10) 2026-06-06T23:52:49,148 Skipping link: No binaries permitted for niwrap-freesurfer: https://archive1.piwheels.org/simple/niwrap-freesurfer/niwrap_freesurfer-0.9.2-py3-none-any.whl#sha256=c89835c0812acdb83abe6a1c7e66687ef43b5c3144ac4446b3b1dfdaf11e2fbf (from https://www.piwheels.org/simple/niwrap-freesurfer/) (requires-python:>=3.10) 2026-06-06T23:52:49,149 Skipping link: No binaries permitted for niwrap-freesurfer: https://archive1.piwheels.org/simple/niwrap-freesurfer/niwrap_freesurfer-0.9.1-py3-none-any.whl#sha256=084b74a9f2228c855a0fb13228aa76f7a44ca1cd64b146e117f37a2ebe7a9375 (from https://www.piwheels.org/simple/niwrap-freesurfer/) (requires-python:>=3.10) 2026-06-06T23:52:49,150 Skipping link: No binaries permitted for niwrap-freesurfer: https://archive1.piwheels.org/simple/niwrap-freesurfer/niwrap_freesurfer-0.9.0-py3-none-any.whl#sha256=dc6e7db43bba87e17f088a37ed1f713335a77b0374b200af085aaa3d6baad695 (from https://www.piwheels.org/simple/niwrap-freesurfer/) (requires-python:>=3.10) 2026-06-06T23:52:49,150 Skipping link: No binaries permitted for niwrap-freesurfer: https://archive1.piwheels.org/simple/niwrap-freesurfer/niwrap_freesurfer-0.8.13-py3-none-any.whl#sha256=e1a403ebdd188d1bf9f3ee281c5ea232e7866cead5a2fe850a4e79e31638b39d (from https://www.piwheels.org/simple/niwrap-freesurfer/) (requires-python:>=3.10) 2026-06-06T23:52:49,151 Skipping link: No binaries permitted for niwrap-freesurfer: https://archive1.piwheels.org/simple/niwrap-freesurfer/niwrap_freesurfer-0.8.12-py3-none-any.whl#sha256=743457b7858289aef25cce70e8f142b96ff34e659ebade7540acd9462852d300 (from https://www.piwheels.org/simple/niwrap-freesurfer/) (requires-python:>=3.10) 2026-06-06T23:52:49,152 Skipping link: No binaries permitted for niwrap-freesurfer: https://archive1.piwheels.org/simple/niwrap-freesurfer/niwrap_freesurfer-0.8.11-py3-none-any.whl#sha256=ae9ddbec642437c1ccf5d8cf776f38d625e4f5ff9cdfcefb742cc110ce18c74e (from https://www.piwheels.org/simple/niwrap-freesurfer/) (requires-python:>=3.10) 2026-06-06T23:52:49,152 Skipping link: No binaries permitted for niwrap-freesurfer: https://archive1.piwheels.org/simple/niwrap-freesurfer/niwrap_freesurfer-0.8.10-py3-none-any.whl#sha256=4467998cef902366cddb849827bb153b44618ad652879e0cbae15e98caff5cf6 (from https://www.piwheels.org/simple/niwrap-freesurfer/) (requires-python:>=3.10) 2026-06-06T23:52:49,153 Skipping link: No binaries permitted for niwrap-freesurfer: https://archive1.piwheels.org/simple/niwrap-freesurfer/niwrap_freesurfer-0.8.9-py3-none-any.whl#sha256=707f084efa6818fa49657137e3e6d53da0ba36524b99d06fc3eadd79293f5bd9 (from https://www.piwheels.org/simple/niwrap-freesurfer/) (requires-python:>=3.10) 2026-06-06T23:52:49,153 Skipping link: No binaries permitted for niwrap-freesurfer: https://archive1.piwheels.org/simple/niwrap-freesurfer/niwrap_freesurfer-0.8.8-py3-none-any.whl#sha256=ae123cc975fb2fe1f9bb9df176e22cceac09ecafabf77144c2bbd6966cf007e4 (from https://www.piwheels.org/simple/niwrap-freesurfer/) (requires-python:>=3.10) 2026-06-06T23:52:49,153 Skipping link: No binaries permitted for niwrap-freesurfer: https://archive1.piwheels.org/simple/niwrap-freesurfer/niwrap_freesurfer-0.8.7-py3-none-any.whl#sha256=4024573fa7261573f901aa2a7d46466ab7173e161e6fe6535faf57e657a72cdc (from https://www.piwheels.org/simple/niwrap-freesurfer/) (requires-python:>=3.10) 2026-06-06T23:52:49,154 Skipping link: No binaries permitted for niwrap-freesurfer: https://archive1.piwheels.org/simple/niwrap-freesurfer/niwrap_freesurfer-0.8.6-py3-none-any.whl#sha256=835b768b51a67840383cbf80aa227c95f724a5f2c9b41c3ecdcd615553f4e290 (from https://www.piwheels.org/simple/niwrap-freesurfer/) (requires-python:>=3.10) 2026-06-06T23:52:49,155 Skipping link: No binaries permitted for niwrap-freesurfer: https://archive1.piwheels.org/simple/niwrap-freesurfer/niwrap_freesurfer-0.8.5-py3-none-any.whl#sha256=f89003d44292c48d35730d8aeb70b4d8ac9b4bcee0af13cd72193b59ecb41369 (from https://www.piwheels.org/simple/niwrap-freesurfer/) (requires-python:>=3.10) 2026-06-06T23:52:49,155 Skipping link: No binaries permitted for niwrap-freesurfer: https://archive1.piwheels.org/simple/niwrap-freesurfer/niwrap_freesurfer-0.8.4-py3-none-any.whl#sha256=bace6ff51a6e58fa0f8deeca99f6afe1b426426b6e4bbb930dae19330d54684e (from https://www.piwheels.org/simple/niwrap-freesurfer/) (requires-python:>=3.10) 2026-06-06T23:52:49,156 Skipping link: No binaries permitted for niwrap-freesurfer: https://archive1.piwheels.org/simple/niwrap-freesurfer/niwrap_freesurfer-0.8.3-py3-none-any.whl#sha256=ce19075ec9f39be981b219bf7553ee7b68940afa8b21bcbf1769480ad5e9f1ea (from https://www.piwheels.org/simple/niwrap-freesurfer/) (requires-python:>=3.10) 2026-06-06T23:52:49,156 Skipping link: No binaries permitted for niwrap-freesurfer: https://archive1.piwheels.org/simple/niwrap-freesurfer/niwrap_freesurfer-0.8.2-py3-none-any.whl#sha256=bc1733737f665cf3e9a94f4b601b30e3bd6f583532513bb807a1ffe9180e28c7 (from https://www.piwheels.org/simple/niwrap-freesurfer/) (requires-python:>=3.10) 2026-06-06T23:52:49,157 Skipping link: No binaries permitted for niwrap-freesurfer: https://archive1.piwheels.org/simple/niwrap-freesurfer/niwrap_freesurfer-0.8.1-py3-none-any.whl#sha256=461194a24ed981bb06f164ca221b91b62a38e781c6dc4c0b6f07eb53f27ef442 (from https://www.piwheels.org/simple/niwrap-freesurfer/) (requires-python:>=3.10) 2026-06-06T23:52:49,158 Skipping link: No binaries permitted for niwrap-freesurfer: https://archive1.piwheels.org/simple/niwrap-freesurfer/niwrap_freesurfer-0.8.0-py3-none-any.whl#sha256=15e6d6a62b8f0267fe8b46dec9a61372b2ad13522acf025684bfbc83d8b90e7a (from https://www.piwheels.org/simple/niwrap-freesurfer/) (requires-python:>=3.10) 2026-06-06T23:52:49,159 Skipping link: No binaries permitted for niwrap-freesurfer: https://archive1.piwheels.org/simple/niwrap-freesurfer/niwrap_freesurfer-0.7.0-py3-none-any.whl#sha256=c89a8b0962bac3c10de029abefa584bf2d18fa1dfb124d4a35d1484a7aeed817 (from https://www.piwheels.org/simple/niwrap-freesurfer/) (requires-python:>=3.10) 2026-06-06T23:52:49,159 Skipping link: No binaries permitted for niwrap-freesurfer: https://archive1.piwheels.org/simple/niwrap-freesurfer/niwrap_freesurfer-0.6.3-py3-none-any.whl#sha256=ab1578032acf957358ff584001318d4fd73336efec03f03701215ecd54ab4124 (from https://www.piwheels.org/simple/niwrap-freesurfer/) (requires-python:>=3.10) 2026-06-06T23:52:49,160 Skipping link: No binaries permitted for niwrap-freesurfer: https://archive1.piwheels.org/simple/niwrap-freesurfer/niwrap_freesurfer-0.6.2-py3-none-any.whl#sha256=44ffcf91bdef324922c17e82e6176b85ee6780325e61ae3c49a7257fb6050867 (from https://www.piwheels.org/simple/niwrap-freesurfer/) (requires-python:>=3.10) 2026-06-06T23:52:49,160 Skipping link: No binaries permitted for niwrap-freesurfer: https://archive1.piwheels.org/simple/niwrap-freesurfer/niwrap_freesurfer-0.6.1-py3-none-any.whl#sha256=1618e4aa37021068faa22235d5aced403972324c1c1ee090c9f5ddb0922a7331 (from https://www.piwheels.org/simple/niwrap-freesurfer/) (requires-python:>=3.10) 2026-06-06T23:52:49,160 Skipping link: No binaries permitted for niwrap-freesurfer: https://archive1.piwheels.org/simple/niwrap-freesurfer/niwrap_freesurfer-0.6.0-py3-none-any.whl#sha256=4a5ab333b1d95a9ce8213e8f82e5854e6e510cfdb17493a5ed5a28c5003a0989 (from https://www.piwheels.org/simple/niwrap-freesurfer/) (requires-python:>=3.10) 2026-06-06T23:52:49,161 Skipping link: No binaries permitted for niwrap-freesurfer: https://archive1.piwheels.org/simple/niwrap-freesurfer/niwrap_freesurfer-0.5.3-py3-none-any.whl#sha256=0c59c008419b82788b25e89c084949431c56ede297f0211e2e9d8c50558268da (from https://www.piwheels.org/simple/niwrap-freesurfer/) (requires-python:>=3.10) 2026-06-06T23:52:49,162 Skipping link: No binaries permitted for niwrap-freesurfer: https://archive1.piwheels.org/simple/niwrap-freesurfer/niwrap_freesurfer-0.5.2-py3-none-any.whl#sha256=8ea395f94160ece948d576b178f7520ec8ad8818356dabda1cab9c991921e60e (from https://www.piwheels.org/simple/niwrap-freesurfer/) (requires-python:>=3.10) 2026-06-06T23:52:49,162 Skipping link: No binaries permitted for niwrap-freesurfer: https://archive1.piwheels.org/simple/niwrap-freesurfer/niwrap_freesurfer-0.5.1-py3-none-any.whl#sha256=c1b319ac65980f6cd5e0d90bcffa16cbc6aa56c3eddd4eb0946b8e19a6bf18e2 (from https://www.piwheels.org/simple/niwrap-freesurfer/) (requires-python:>=3.10) 2026-06-06T23:52:49,163 Skipping link: No binaries permitted for niwrap-freesurfer: https://archive1.piwheels.org/simple/niwrap-freesurfer/niwrap_freesurfer-0.5.0-py3-none-any.whl#sha256=697261c19d2c097e3aed7dc63ad372dd91dad4c0773941ff72ee0d98527e1fc4 (from https://www.piwheels.org/simple/niwrap-freesurfer/) (requires-python:>=3.10) 2026-06-06T23:52:49,164 Skipping link: not a file: https://www.piwheels.org/simple/niwrap-freesurfer/ 2026-06-06T23:52:49,164 Skipping link: not a file: https://pypi.org/simple/niwrap-freesurfer/ 2026-06-06T23:52:49,187 Given no hashes to check 1 links for project 'niwrap-freesurfer': discarding no candidates 2026-06-06T23:52:49,205 Collecting niwrap-freesurfer==1.0.1 2026-06-06T23:52:49,207 Created temporary directory: /tmp/pip-unpack-yrq_s0m2 2026-06-06T23:52:49,472 Downloading niwrap_freesurfer-1.0.1.tar.gz (833 kB) 2026-06-06T23:52:51,204 Added niwrap-freesurfer==1.0.1 from https://files.pythonhosted.org/packages/86/59/08f4defe40e8b9f3ae94bcbd8b91e256c7bfe194fe1cbb89638ea2ac4a54/niwrap_freesurfer-1.0.1.tar.gz to build tracker '/tmp/pip-build-tracker-wnsmef4n' 2026-06-06T23:52:51,210 Created temporary directory: /tmp/pip-build-env-95lygfbk 2026-06-06T23:52:51,217 Installing build dependencies: started 2026-06-06T23:52:51,218 Running command pip subprocess to install build dependencies 2026-06-06T23:52:52,406 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-06-06T23:52:52,836 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-06-06T23:52:52,859 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-06-06T23:52:54,627 Collecting setuptools>=61 2026-06-06T23:52:54,628 Obtaining dependency information for setuptools>=61 from https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl.metadata 2026-06-06T23:52:54,643 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl.metadata (6.5 kB) 2026-06-06T23:52:54,912 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-06-06T23:52:55,006 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-06-06T23:52:57,784 Installing collected packages: setuptools 2026-06-06T23:53:00,949 Successfully installed setuptools-82.0.1 2026-06-06T23:53:01,220 Installing build dependencies: finished with status 'done' 2026-06-06T23:53:01,227 Getting requirements to build wheel: started 2026-06-06T23:53:01,228 Running command Getting requirements to build wheel 2026-06-06T23:53:01,880 /tmp/pip-build-env-95lygfbk/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-06-06T23:53:01,880 !! 2026-06-06T23:53:01,881 ******************************************************************************** 2026-06-06T23:53:01,882 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-06-06T23:53:01,883 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-06-06T23:53:01,884 or your builds will no longer be supported. 2026-06-06T23:53:01,885 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-06-06T23:53:01,885 ******************************************************************************** 2026-06-06T23:53:01,887 !! 2026-06-06T23:53:01,887 corresp(dist, value, root_dir) 2026-06-06T23:53:01,976 running egg_info 2026-06-06T23:53:01,982 writing niwrap_freesurfer.egg-info/PKG-INFO 2026-06-06T23:53:01,985 writing dependency_links to niwrap_freesurfer.egg-info/dependency_links.txt 2026-06-06T23:53:01,987 writing requirements to niwrap_freesurfer.egg-info/requires.txt 2026-06-06T23:53:01,989 writing top-level names to niwrap_freesurfer.egg-info/top_level.txt 2026-06-06T23:53:02,037 reading manifest file 'niwrap_freesurfer.egg-info/SOURCES.txt' 2026-06-06T23:53:02,141 writing manifest file 'niwrap_freesurfer.egg-info/SOURCES.txt' 2026-06-06T23:53:02,240 Getting requirements to build wheel: finished with status 'done' 2026-06-06T23:53:02,243 Created temporary directory: /tmp/pip-modern-metadata-np9fxtvg 2026-06-06T23:53:02,246 Preparing metadata (pyproject.toml): started 2026-06-06T23:53:02,247 Running command Preparing metadata (pyproject.toml) 2026-06-06T23:53:02,835 /tmp/pip-build-env-95lygfbk/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-06-06T23:53:02,835 !! 2026-06-06T23:53:02,836 ******************************************************************************** 2026-06-06T23:53:02,837 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-06-06T23:53:02,838 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-06-06T23:53:02,838 or your builds will no longer be supported. 2026-06-06T23:53:02,839 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-06-06T23:53:02,839 ******************************************************************************** 2026-06-06T23:53:02,840 !! 2026-06-06T23:53:02,841 corresp(dist, value, root_dir) 2026-06-06T23:53:02,925 running dist_info 2026-06-06T23:53:02,936 creating /tmp/pip-modern-metadata-np9fxtvg/niwrap_freesurfer.egg-info 2026-06-06T23:53:02,937 writing /tmp/pip-modern-metadata-np9fxtvg/niwrap_freesurfer.egg-info/PKG-INFO 2026-06-06T23:53:02,940 writing dependency_links to /tmp/pip-modern-metadata-np9fxtvg/niwrap_freesurfer.egg-info/dependency_links.txt 2026-06-06T23:53:02,942 writing requirements to /tmp/pip-modern-metadata-np9fxtvg/niwrap_freesurfer.egg-info/requires.txt 2026-06-06T23:53:02,943 writing top-level names to /tmp/pip-modern-metadata-np9fxtvg/niwrap_freesurfer.egg-info/top_level.txt 2026-06-06T23:53:02,944 writing manifest file '/tmp/pip-modern-metadata-np9fxtvg/niwrap_freesurfer.egg-info/SOURCES.txt' 2026-06-06T23:53:02,990 reading manifest file '/tmp/pip-modern-metadata-np9fxtvg/niwrap_freesurfer.egg-info/SOURCES.txt' 2026-06-06T23:53:03,013 writing manifest file '/tmp/pip-modern-metadata-np9fxtvg/niwrap_freesurfer.egg-info/SOURCES.txt' 2026-06-06T23:53:03,015 creating '/tmp/pip-modern-metadata-np9fxtvg/niwrap_freesurfer-1.0.1.dist-info' 2026-06-06T23:53:03,136 Preparing metadata (pyproject.toml): finished with status 'done' 2026-06-06T23:53:03,141 Source in /tmp/pip-wheel-hhd47lv2/niwrap-freesurfer_e3382c2401954a04bdb129342cc49927 has version 1.0.1, which satisfies requirement niwrap-freesurfer==1.0.1 from https://files.pythonhosted.org/packages/86/59/08f4defe40e8b9f3ae94bcbd8b91e256c7bfe194fe1cbb89638ea2ac4a54/niwrap_freesurfer-1.0.1.tar.gz 2026-06-06T23:53:03,142 Removed niwrap-freesurfer==1.0.1 from https://files.pythonhosted.org/packages/86/59/08f4defe40e8b9f3ae94bcbd8b91e256c7bfe194fe1cbb89638ea2ac4a54/niwrap_freesurfer-1.0.1.tar.gz from build tracker '/tmp/pip-build-tracker-wnsmef4n' 2026-06-06T23:53:03,147 Created temporary directory: /tmp/pip-unpack-19k0x3q2 2026-06-06T23:53:03,148 Building wheels for collected packages: niwrap-freesurfer 2026-06-06T23:53:03,153 Created temporary directory: /tmp/pip-wheel-37601p5h 2026-06-06T23:53:03,153 Destination directory: /tmp/pip-wheel-37601p5h 2026-06-06T23:53:03,155 Building wheel for niwrap-freesurfer (pyproject.toml): started 2026-06-06T23:53:03,156 Running command Building wheel for niwrap-freesurfer (pyproject.toml) 2026-06-06T23:53:03,710 /tmp/pip-build-env-95lygfbk/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-06-06T23:53:03,710 !! 2026-06-06T23:53:03,711 ******************************************************************************** 2026-06-06T23:53:03,712 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-06-06T23:53:03,713 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-06-06T23:53:03,713 or your builds will no longer be supported. 2026-06-06T23:53:03,715 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-06-06T23:53:03,715 ******************************************************************************** 2026-06-06T23:53:03,716 !! 2026-06-06T23:53:03,717 corresp(dist, value, root_dir) 2026-06-06T23:53:03,790 running bdist_wheel 2026-06-06T23:53:03,808 running build 2026-06-06T23:53:03,809 running build_py 2026-06-06T23:53:03,830 creating build/lib/freesurfer 2026-06-06T23:53:03,833 copying ./mri_matrix_multiply.py -> build/lib/freesurfer 2026-06-06T23:53:03,835 copying ./mri_z2p.py -> build/lib/freesurfer 2026-06-06T23:53:03,838 copying ./mri_label_vals.py -> build/lib/freesurfer 2026-06-06T23:53:03,841 copying ./aparc_stats_aseg.py -> build/lib/freesurfer 2026-06-06T23:53:03,843 copying ./mris_compute_lgi.py -> build/lib/freesurfer 2026-06-06T23:53:03,846 copying ./mideface.py -> build/lib/freesurfer 2026-06-06T23:53:03,848 copying ./talairach2.py -> build/lib/freesurfer 2026-06-06T23:53:03,851 copying ./wfilemask.py -> build/lib/freesurfer 2026-06-06T23:53:03,853 copying ./mri_compute_bias.py -> build/lib/freesurfer 2026-06-06T23:53:03,856 copying ./trac_preproc.py -> build/lib/freesurfer 2026-06-06T23:53:03,858 copying ./grad_unwarp.py -> build/lib/freesurfer 2026-06-06T23:53:03,860 copying ./mri_gdfglm.py -> build/lib/freesurfer 2026-06-06T23:53:03,863 copying ./zero_lt_4dfp.py -> build/lib/freesurfer 2026-06-06T23:53:03,865 copying ./fsl_5_0_2_xyztrans_sch.py -> build/lib/freesurfer 2026-06-06T23:53:03,867 copying ./samseg_long.py -> build/lib/freesurfer 2026-06-06T23:53:03,870 copying ./bugr.py -> build/lib/freesurfer 2026-06-06T23:53:03,872 copying ./mris_multimodal.py -> build/lib/freesurfer 2026-06-06T23:53:03,874 copying ./mri_nu_correct_mni.py -> build/lib/freesurfer 2026-06-06T23:53:03,877 copying ./mris_merge_parcellations.py -> build/lib/freesurfer 2026-06-06T23:53:03,879 copying ./mpr2mni305.py -> build/lib/freesurfer 2026-06-06T23:53:03,881 copying ./mris_fwhm.py -> build/lib/freesurfer 2026-06-06T23:53:03,884 copying ./run_segment_subject_t1_t2_auto_estimate_alveus_ml_sh.py -> build/lib/freesurfer 2026-06-06T23:53:03,886 copying ./mris_register_to_volume.py -> build/lib/freesurfer 2026-06-06T23:53:03,889 copying ./sphere_subject.py -> build/lib/freesurfer 2026-06-06T23:53:03,891 copying ./jkgcatrain.py -> build/lib/freesurfer 2026-06-06T23:53:03,894 copying ./bmedits2surf.py -> build/lib/freesurfer 2026-06-06T23:53:03,896 copying ./mris_volmask_novtk.py -> build/lib/freesurfer 2026-06-06T23:53:03,898 copying ./mris_label2annot.py -> build/lib/freesurfer 2026-06-06T23:53:03,901 copying ./mri_cvs_data_copy.py -> build/lib/freesurfer 2026-06-06T23:53:03,903 copying ./post_recon_all.py -> build/lib/freesurfer 2026-06-06T23:53:03,906 copying ./histo_register_block.py -> build/lib/freesurfer 2026-06-06T23:53:03,908 copying ./mri_add_xform_to_header.py -> build/lib/freesurfer 2026-06-06T23:53:03,910 copying ./mris_estimate_wm.py -> build/lib/freesurfer 2026-06-06T23:53:03,913 copying ./mri_gradunwarp.py -> build/lib/freesurfer 2026-06-06T23:53:03,915 copying ./segment_ha_t2_sh.py -> build/lib/freesurfer 2026-06-06T23:53:03,917 copying ./mris_topo_fixer.py -> build/lib/freesurfer 2026-06-06T23:53:03,920 copying ./mris_nudge.py -> build/lib/freesurfer 2026-06-06T23:53:03,922 copying ./mri_deface.py -> build/lib/freesurfer 2026-06-06T23:53:03,924 copying ./make_folding_atlas.py -> build/lib/freesurfer 2026-06-06T23:53:03,927 copying ./mrisp_paint.py -> build/lib/freesurfer 2026-06-06T23:53:03,929 copying ./recon_all_clinical_sh.py -> build/lib/freesurfer 2026-06-06T23:53:03,932 copying ./mris_transmantle_dysplasia_paths.py -> build/lib/freesurfer 2026-06-06T23:53:03,934 copying ./mri_maps2csd.py -> build/lib/freesurfer 2026-06-06T23:53:03,936 copying ./mri_extract_label.py -> build/lib/freesurfer 2026-06-06T23:53:03,939 copying ./mris_calc.py -> build/lib/freesurfer 2026-06-06T23:53:03,941 copying ./meanval.py -> build/lib/freesurfer 2026-06-06T23:53:03,943 copying ./ifh2hdr.py -> build/lib/freesurfer 2026-06-06T23:53:03,946 copying ./mri_volcluster.py -> build/lib/freesurfer 2026-06-06T23:53:03,948 copying ./update_needed.py -> build/lib/freesurfer 2026-06-06T23:53:03,951 copying ./mris_remove_intersection.py -> build/lib/freesurfer 2026-06-06T23:53:03,953 copying ./plot_structure_stats_tcl.py -> build/lib/freesurfer 2026-06-06T23:53:03,955 copying ./dmri_save_histograms.py -> build/lib/freesurfer 2026-06-06T23:53:03,957 copying ./fslregister.py -> build/lib/freesurfer 2026-06-06T23:53:03,960 copying ./mris_seg2annot.py -> build/lib/freesurfer 2026-06-06T23:53:03,962 copying ./sphere_subject_lh.py -> build/lib/freesurfer 2026-06-06T23:53:03,964 copying ./mri_easyreg.py -> build/lib/freesurfer 2026-06-06T23:53:03,966 copying ./mris_remove_variance.py -> build/lib/freesurfer 2026-06-06T23:53:03,968 copying ./mri_watershed.py -> build/lib/freesurfer 2026-06-06T23:53:03,971 copying ./fname2stem.py -> build/lib/freesurfer 2026-06-06T23:53:03,973 copying ./mri_joint_density.py -> build/lib/freesurfer 2026-06-06T23:53:03,975 copying ./analyzeto4dfp.py -> build/lib/freesurfer 2026-06-06T23:53:03,977 copying ./dmri_spline.py -> build/lib/freesurfer 2026-06-06T23:53:03,979 copying ./mris_sphere.py -> build/lib/freesurfer 2026-06-06T23:53:03,982 copying ./mris_diff.py -> build/lib/freesurfer 2026-06-06T23:53:03,985 copying ./is_surface.py -> build/lib/freesurfer 2026-06-06T23:53:03,987 copying ./dmri_trk2trk.py -> build/lib/freesurfer 2026-06-06T23:53:03,990 copying ./nmovie_qt.py -> build/lib/freesurfer 2026-06-06T23:53:03,992 copying ./mris_compute_volume_fractions.py -> build/lib/freesurfer 2026-06-06T23:53:03,995 copying ./mris_label_calc.py -> build/lib/freesurfer 2026-06-06T23:53:03,997 copying ./tractstats2table.py -> build/lib/freesurfer 2026-06-06T23:53:04,000 copying ./mri_twoclass.py -> build/lib/freesurfer 2026-06-06T23:53:04,002 copying ./sfa2fieldsign.py -> build/lib/freesurfer 2026-06-06T23:53:04,005 copying ./test_tutorials_sh.py -> build/lib/freesurfer 2026-06-06T23:53:04,008 copying ./mris_register.py -> build/lib/freesurfer 2026-06-06T23:53:04,011 copying ./mris_smooth.py -> build/lib/freesurfer 2026-06-06T23:53:04,014 copying ./mris_rescale.py -> build/lib/freesurfer 2026-06-06T23:53:04,016 copying ./mri_extract_largest_cc.py -> build/lib/freesurfer 2026-06-06T23:53:04,019 copying ./mri_ca_tissue_parms.py -> build/lib/freesurfer 2026-06-06T23:53:04,022 copying ./recon_all_exvivo.py -> build/lib/freesurfer 2026-06-06T23:53:04,024 copying ./defect_seg.py -> build/lib/freesurfer 2026-06-06T23:53:04,027 copying ./mri_validate_skull_stripped.py -> build/lib/freesurfer 2026-06-06T23:53:04,029 copying ./cp_dicom.py -> build/lib/freesurfer 2026-06-06T23:53:04,032 copying ./fname2ext.py -> build/lib/freesurfer 2026-06-06T23:53:04,034 copying ./predict_v1_sh.py -> build/lib/freesurfer 2026-06-06T23:53:04,037 copying ./tkregister2_cmdl.py -> build/lib/freesurfer 2026-06-06T23:53:04,040 copying ./inflate_subject_new_lh.py -> build/lib/freesurfer 2026-06-06T23:53:04,043 copying ./rca_long_tp_init.py -> build/lib/freesurfer 2026-06-06T23:53:04,045 copying ./gcaprepone.py -> build/lib/freesurfer 2026-06-06T23:53:04,048 copying ./morph_tables_rh.py -> build/lib/freesurfer 2026-06-06T23:53:04,050 copying ./talsegprob.py -> build/lib/freesurfer 2026-06-06T23:53:04,053 copying ./mri_linear_register.py -> build/lib/freesurfer 2026-06-06T23:53:04,056 copying ./mris_mesh_subdivide.py -> build/lib/freesurfer 2026-06-06T23:53:04,058 copying ./morph_tables_lh.py -> build/lib/freesurfer 2026-06-06T23:53:04,061 copying ./mri_concatenate_lta.py -> build/lib/freesurfer 2026-06-06T23:53:04,063 copying ./swi_process.py -> build/lib/freesurfer 2026-06-06T23:53:04,066 copying ./mri_evaluate_morph.py -> build/lib/freesurfer 2026-06-06T23:53:04,069 copying ./mri_head.py -> build/lib/freesurfer 2026-06-06T23:53:04,072 copying ./talairach_afd.py -> build/lib/freesurfer 2026-06-06T23:53:04,074 copying ./mri_cal_renormalize_gca.py -> build/lib/freesurfer 2026-06-06T23:53:04,076 copying ./compute_interrater_variability_csh.py -> build/lib/freesurfer 2026-06-06T23:53:04,079 copying ./mris_smooth_intracortical.py -> build/lib/freesurfer 2026-06-06T23:53:04,081 copying ./beta2sxa.py -> build/lib/freesurfer 2026-06-06T23:53:04,083 copying ./histo_compute_joint_density.py -> build/lib/freesurfer 2026-06-06T23:53:04,086 copying ./make_symmetric.py -> build/lib/freesurfer 2026-06-06T23:53:04,088 copying ./tkregisterfv.py -> build/lib/freesurfer 2026-06-06T23:53:04,090 copying ./fsl_rigid_register.py -> build/lib/freesurfer 2026-06-06T23:53:04,093 copying ./mri_ca_register.py -> build/lib/freesurfer 2026-06-06T23:53:04,096 copying ./tksurferfv.py -> build/lib/freesurfer 2026-06-06T23:53:04,098 copying ./export_gcam.py -> build/lib/freesurfer 2026-06-06T23:53:04,101 copying ./talairach.py -> build/lib/freesurfer 2026-06-06T23:53:04,103 copying ./aseg2feat.py -> build/lib/freesurfer 2026-06-06T23:53:04,105 copying ./mri_threshold.py -> build/lib/freesurfer 2026-06-06T23:53:04,108 copying ./mris_resample.py -> build/lib/freesurfer 2026-06-06T23:53:04,110 copying ./long_create_base_sigma.py -> build/lib/freesurfer 2026-06-06T23:53:04,112 copying ./mri_make_uchar.py -> build/lib/freesurfer 2026-06-06T23:53:04,114 copying ./mris_shrinkwrap.py -> build/lib/freesurfer 2026-06-06T23:53:04,117 copying ./reinflate_subject_rh.py -> build/lib/freesurfer 2026-06-06T23:53:04,119 copying ./avi2talxfm.py -> build/lib/freesurfer 2026-06-06T23:53:04,121 copying ./mri_fill.py -> build/lib/freesurfer 2026-06-06T23:53:04,124 copying ./unpackimadir.py -> build/lib/freesurfer 2026-06-06T23:53:04,126 copying ./hiam_make_surfaces.py -> build/lib/freesurfer 2026-06-06T23:53:04,128 copying ./mris_profile_clustering.py -> build/lib/freesurfer 2026-06-06T23:53:04,130 copying ./tkmedit.py -> build/lib/freesurfer 2026-06-06T23:53:04,133 copying ./segment_subject_t1_auto_estimate_alveus_ml.py -> build/lib/freesurfer 2026-06-06T23:53:04,135 copying ./long_submit_postproc.py -> build/lib/freesurfer 2026-06-06T23:53:04,137 copying ./make_exvivo_filled.py -> build/lib/freesurfer 2026-06-06T23:53:04,140 copying ./mri_map_cpdat.py -> build/lib/freesurfer 2026-06-06T23:53:04,142 copying ./mri_modify.py -> build/lib/freesurfer 2026-06-06T23:53:04,144 copying ./longmc.py -> build/lib/freesurfer 2026-06-06T23:53:04,147 copying ./mri_align_long_csh.py -> build/lib/freesurfer 2026-06-06T23:53:04,149 copying ./fsr_import.py -> build/lib/freesurfer 2026-06-06T23:53:04,151 copying ./mri_synthseg.py -> build/lib/freesurfer 2026-06-06T23:53:04,154 copying ./map_all_labels_lh.py -> build/lib/freesurfer 2026-06-06T23:53:04,156 copying ./mri_gcab_train.py -> build/lib/freesurfer 2026-06-06T23:53:04,158 copying ./run_segment_thalamic_nuclei_sh.py -> build/lib/freesurfer 2026-06-06T23:53:04,161 copying ./rca_fix_ento.py -> build/lib/freesurfer 2026-06-06T23:53:04,163 copying ./irepifitvol_glnx64.py -> build/lib/freesurfer 2026-06-06T23:53:04,166 copying ./mri_fuse_segmentations.py -> build/lib/freesurfer 2026-06-06T23:53:04,168 copying ./make_average_subcort.py -> build/lib/freesurfer 2026-06-06T23:53:04,170 copying ./mri_label_histo.py -> build/lib/freesurfer 2026-06-06T23:53:04,173 copying ./bblabel.py -> build/lib/freesurfer 2026-06-06T23:53:04,175 copying ./fs_update.py -> build/lib/freesurfer 2026-06-06T23:53:04,178 copying ./mris_make_face_parcellation.py -> build/lib/freesurfer 2026-06-06T23:53:04,180 copying ./fs_install_mcr.py -> build/lib/freesurfer 2026-06-06T23:53:04,182 copying ./mris_reverse.py -> build/lib/freesurfer 2026-06-06T23:53:04,184 copying ./mri_ca_train.py -> build/lib/freesurfer 2026-06-06T23:53:04,187 copying ./mris_inflate.py -> build/lib/freesurfer 2026-06-06T23:53:04,189 copying ./mri_vol2vol.py -> build/lib/freesurfer 2026-06-06T23:53:04,192 copying ./connected_components.py -> build/lib/freesurfer 2026-06-06T23:53:04,194 copying ./register_elderly_subject.py -> build/lib/freesurfer 2026-06-06T23:53:04,196 copying ./mris_volume.py -> build/lib/freesurfer 2026-06-06T23:53:04,198 copying ./register_subject.py -> build/lib/freesurfer 2026-06-06T23:53:04,200 copying ./segment_subject_t2_auto_estimate_alveus_ml.py -> build/lib/freesurfer 2026-06-06T23:53:04,203 copying ./mri_voldiff.py -> build/lib/freesurfer 2026-06-06T23:53:04,205 copying ./unpack_ima_tcl.py -> build/lib/freesurfer 2026-06-06T23:53:04,207 copying ./mri_make_bem_surfaces.py -> build/lib/freesurfer 2026-06-06T23:53:04,209 copying ./mris_make_template.py -> build/lib/freesurfer 2026-06-06T23:53:04,211 copying ./mri_parse_sdcmdir.py -> build/lib/freesurfer 2026-06-06T23:53:04,214 copying ./mri_segment_hypothalamic_subunits.py -> build/lib/freesurfer 2026-06-06T23:53:04,216 copying ./mri_compute_seg_overlap.py -> build/lib/freesurfer 2026-06-06T23:53:04,219 copying ./mri_synthsr_hyperfine.py -> build/lib/freesurfer 2026-06-06T23:53:04,221 copying ./build_desikan_killiany_gcs_csh.py -> build/lib/freesurfer 2026-06-06T23:53:04,224 copying ./mris_segment_vals.py -> build/lib/freesurfer 2026-06-06T23:53:04,226 copying ./mris_info.py -> build/lib/freesurfer 2026-06-06T23:53:04,228 copying ./inflate_subject_sc.py -> build/lib/freesurfer 2026-06-06T23:53:04,231 copying ./vol2subfield.py -> build/lib/freesurfer 2026-06-06T23:53:04,234 copying ./mris_thickness_diff.py -> build/lib/freesurfer 2026-06-06T23:53:04,236 copying ./mri_exvivo_strip.py -> build/lib/freesurfer 2026-06-06T23:53:04,239 copying ./mri_cor2label.py -> build/lib/freesurfer 2026-06-06T23:53:04,241 copying ./mris_translate_annotation.py -> build/lib/freesurfer 2026-06-06T23:53:04,243 copying ./mris_ba_segment.py -> build/lib/freesurfer 2026-06-06T23:53:04,245 copying ./mris_place_surface.py -> build/lib/freesurfer 2026-06-06T23:53:04,249 copying ./reg_feat2anat.py -> build/lib/freesurfer 2026-06-06T23:53:04,251 copying ./mris_defects_pointset.py -> build/lib/freesurfer 2026-06-06T23:53:04,254 copying ./mri_defacer.py -> build/lib/freesurfer 2026-06-06T23:53:04,257 copying ./morph_subject_rh.py -> build/lib/freesurfer 2026-06-06T23:53:04,259 copying ./lta_convert.py -> build/lib/freesurfer 2026-06-06T23:53:04,262 copying ./mris_make_average_surface.py -> build/lib/freesurfer 2026-06-06T23:53:04,265 copying ./mris_deform.py -> build/lib/freesurfer 2026-06-06T23:53:04,268 copying ./unpack_mnc_tcl.py -> build/lib/freesurfer 2026-06-06T23:53:04,270 copying ./xcorr.py -> build/lib/freesurfer 2026-06-06T23:53:04,272 copying ./run_segment_subfields_t1_longitudinal_sh.py -> build/lib/freesurfer 2026-06-06T23:53:04,274 copying ./run_segment_subject_sh.py -> build/lib/freesurfer 2026-06-06T23:53:04,277 copying ./mri_vol2label.py -> build/lib/freesurfer 2026-06-06T23:53:04,280 copying ./mri_coreg.py -> build/lib/freesurfer 2026-06-06T23:53:04,284 copying ./mkheadsurf.py -> build/lib/freesurfer 2026-06-06T23:53:04,286 copying ./bbregister.py -> build/lib/freesurfer 2026-06-06T23:53:04,289 copying ./conf2hires.py -> build/lib/freesurfer 2026-06-06T23:53:04,292 copying ./quantify_brainstem_structures_sh.py -> build/lib/freesurfer 2026-06-06T23:53:04,294 copying ./mri_mi.py -> build/lib/freesurfer 2026-06-06T23:53:04,296 copying ./mksurfatlas.py -> build/lib/freesurfer 2026-06-06T23:53:04,298 copying ./mris_volmask_vtk.py -> build/lib/freesurfer 2026-06-06T23:53:04,301 copying ./compute_vox2vox.py -> build/lib/freesurfer 2026-06-06T23:53:04,304 copying ./mri_gtmpvc.py -> build/lib/freesurfer 2026-06-06T23:53:04,307 copying ./mri_surf2surf.py -> build/lib/freesurfer 2026-06-06T23:53:04,311 copying ./vol2symsurf.py -> build/lib/freesurfer 2026-06-06T23:53:04,313 copying ./mri_brain_volume.py -> build/lib/freesurfer 2026-06-06T23:53:04,316 copying ./annot2std.py -> build/lib/freesurfer 2026-06-06T23:53:04,318 copying ./lta_diff.py -> build/lib/freesurfer 2026-06-06T23:53:04,321 copying ./biasfield.py -> build/lib/freesurfer 2026-06-06T23:53:04,323 copying ./mri_log_likelihood.py -> build/lib/freesurfer 2026-06-06T23:53:04,325 copying ./segment_bs_sh.py -> build/lib/freesurfer 2026-06-06T23:53:04,327 copying ./lpcregister.py -> build/lib/freesurfer 2026-06-06T23:53:04,330 copying ./fs_tutorial_data.py -> build/lib/freesurfer 2026-06-06T23:53:04,332 copying ./mri_info.py -> build/lib/freesurfer 2026-06-06T23:53:04,335 copying ./mri_train.py -> build/lib/freesurfer 2026-06-06T23:53:04,337 copying ./mri_linear_align.py -> build/lib/freesurfer 2026-06-06T23:53:04,339 copying ./asegstats2table.py -> build/lib/freesurfer 2026-06-06T23:53:04,342 copying ./label_subject.py -> build/lib/freesurfer 2026-06-06T23:53:04,344 copying ./inflate_subject_new_rh.py -> build/lib/freesurfer 2026-06-06T23:53:04,346 copying ./remove_talairach.py -> build/lib/freesurfer 2026-06-06T23:53:04,348 copying ./flip_4dfp.py -> build/lib/freesurfer 2026-06-06T23:53:04,351 copying ./mris_surface_stats.py -> build/lib/freesurfer 2026-06-06T23:53:04,353 copying ./table2map.py -> build/lib/freesurfer 2026-06-06T23:53:04,355 copying ./fiducials_calibration.py -> build/lib/freesurfer 2026-06-06T23:53:04,357 copying ./mri_mc.py -> build/lib/freesurfer 2026-06-06T23:53:04,360 copying ./register_csh.py -> build/lib/freesurfer 2026-06-06T23:53:04,362 copying ./mri_gcut.py -> build/lib/freesurfer 2026-06-06T23:53:04,364 copying ./mri_robust_template.py -> build/lib/freesurfer 2026-06-06T23:53:04,367 copying ./run_qdec_glm.py -> build/lib/freesurfer 2026-06-06T23:53:04,369 copying ./dt_recon.py -> build/lib/freesurfer 2026-06-06T23:53:04,372 copying ./mris_errors.py -> build/lib/freesurfer 2026-06-06T23:53:04,374 copying ./mri_nl_align.py -> build/lib/freesurfer 2026-06-06T23:53:04,377 copying ./mri_cnr.py -> build/lib/freesurfer 2026-06-06T23:53:04,379 copying ./vol2segavg.py -> build/lib/freesurfer 2026-06-06T23:53:04,382 copying ./mri_long_normalize.py -> build/lib/freesurfer 2026-06-06T23:53:04,384 copying ./mri_normalize.py -> build/lib/freesurfer 2026-06-06T23:53:04,387 copying ./mri_rf_train.py -> build/lib/freesurfer 2026-06-06T23:53:04,389 copying ./spm_t_to_b.py -> build/lib/freesurfer 2026-06-06T23:53:04,392 copying ./mris_niters2fwhm.py -> build/lib/freesurfer 2026-06-06T23:53:04,394 copying ./mri_robust_register.py -> build/lib/freesurfer 2026-06-06T23:53:04,397 copying ./mris_map_cuts.py -> build/lib/freesurfer 2026-06-06T23:53:04,399 copying ./label_elderly_subject.py -> build/lib/freesurfer 2026-06-06T23:53:04,401 copying ./segment_subfields_t1_longitudinal.py -> build/lib/freesurfer 2026-06-06T23:53:04,404 copying ./samseg2recon.py -> build/lib/freesurfer 2026-06-06T23:53:04,406 copying ./long_qdec_table.py -> build/lib/freesurfer 2026-06-06T23:53:04,408 copying ./aparcstatsdiff.py -> build/lib/freesurfer 2026-06-06T23:53:04,411 copying ./hiam_make_template.py -> build/lib/freesurfer 2026-06-06T23:53:04,413 copying ./mri_concatenate_gcam.py -> build/lib/freesurfer 2026-06-06T23:53:04,415 copying ./xfmrot.py -> build/lib/freesurfer 2026-06-06T23:53:04,418 copying ./mris_compute_acorr.py -> build/lib/freesurfer 2026-06-06T23:53:04,420 copying ./segment_subject_notal.py -> build/lib/freesurfer 2026-06-06T23:53:04,422 copying ./dmri_pathstats.py -> build/lib/freesurfer 2026-06-06T23:53:04,425 copying ./mmppsp.py -> build/lib/freesurfer 2026-06-06T23:53:04,427 copying ./labels_union.py -> build/lib/freesurfer 2026-06-06T23:53:04,430 copying ./inflate_subject_rh.py -> build/lib/freesurfer 2026-06-06T23:53:04,432 copying ./labels_disjoint.py -> build/lib/freesurfer 2026-06-06T23:53:04,434 copying ./tal_compare.py -> build/lib/freesurfer 2026-06-06T23:53:04,437 copying ./feat2surf.py -> build/lib/freesurfer 2026-06-06T23:53:04,439 copying ./gems_compute_atlas_probs.py -> build/lib/freesurfer 2026-06-06T23:53:04,442 copying ./mri_and.py -> build/lib/freesurfer 2026-06-06T23:53:04,444 copying ./label_subject_mixed.py -> build/lib/freesurfer 2026-06-06T23:53:04,446 copying ./mris_compute_layer_intensities.py -> build/lib/freesurfer 2026-06-06T23:53:04,448 copying ./fs_lib_check.py -> build/lib/freesurfer 2026-06-06T23:53:04,450 copying ./mri_seg_overlap.py -> build/lib/freesurfer 2026-06-06T23:53:04,453 copying ./gdcmconv_fs.py -> build/lib/freesurfer 2026-06-06T23:53:04,455 copying ./mri_func2sph.py -> build/lib/freesurfer 2026-06-06T23:53:04,458 copying ./mri_synthesize.py -> build/lib/freesurfer 2026-06-06T23:53:04,460 copying ./mri_gca_ambiguous.py -> build/lib/freesurfer 2026-06-06T23:53:04,462 copying ./label2patch.py -> build/lib/freesurfer 2026-06-06T23:53:04,464 copying ./inflate_subject3.py -> build/lib/freesurfer 2026-06-06T23:53:04,466 copying ./mri_compute_overlap.py -> build/lib/freesurfer 2026-06-06T23:53:04,469 copying ./mkima_index_tcl.py -> build/lib/freesurfer 2026-06-06T23:53:04,471 copying ./mris_remesh.py -> build/lib/freesurfer 2026-06-06T23:53:04,473 copying ./mri_histo_eq.py -> build/lib/freesurfer 2026-06-06T23:53:04,475 copying ./mri_sclimbic_seg.py -> build/lib/freesurfer 2026-06-06T23:53:04,478 copying ./mris_find_flat_regions.py -> build/lib/freesurfer 2026-06-06T23:53:04,480 copying ./mris_talairach.py -> build/lib/freesurfer 2026-06-06T23:53:04,482 copying ./mris_morph_stats.py -> build/lib/freesurfer 2026-06-06T23:53:04,484 copying ./surfreg.py -> build/lib/freesurfer 2026-06-06T23:53:04,486 copying ./mris_skeletonize.py -> build/lib/freesurfer 2026-06-06T23:53:04,489 copying ./swi_preprocess.py -> build/lib/freesurfer 2026-06-06T23:53:04,491 copying ./mris_register_to_label.py -> build/lib/freesurfer 2026-06-06T23:53:04,494 copying ./mri_vessel_segment.py -> build/lib/freesurfer 2026-06-06T23:53:04,496 copying ./mri_convert.py -> build/lib/freesurfer 2026-06-06T23:53:04,498 copying ./dmri_motion.py -> build/lib/freesurfer 2026-06-06T23:53:04,500 copying ./morph_only_subject_rh.py -> build/lib/freesurfer 2026-06-06T23:53:04,503 copying ./map_central_sulcus.py -> build/lib/freesurfer 2026-06-06T23:53:04,505 copying ./trac_all.py -> build/lib/freesurfer 2026-06-06T23:53:04,508 copying ./imgreg_4dfp.py -> build/lib/freesurfer 2026-06-06T23:53:04,510 copying ./mri_ms_fitparms.py -> build/lib/freesurfer 2026-06-06T23:53:04,513 copying ./makevol.py -> build/lib/freesurfer 2026-06-06T23:53:04,516 copying ./orient_las.py -> build/lib/freesurfer 2026-06-06T23:53:04,518 copying ./fsr_coreg.py -> build/lib/freesurfer 2026-06-06T23:53:04,520 copying ./mris_fix_topology.py -> build/lib/freesurfer 2026-06-06T23:53:04,522 copying ./label_subject_flash.py -> build/lib/freesurfer 2026-06-06T23:53:04,525 copying ./mri_sph2surf.py -> build/lib/freesurfer 2026-06-06T23:53:04,527 copying ./isolate_labels_keeporigval_csh.py -> build/lib/freesurfer 2026-06-06T23:53:04,529 copying ./segment_monkey.py -> build/lib/freesurfer 2026-06-06T23:53:04,531 copying ./mris_exvivo_surfaces.py -> build/lib/freesurfer 2026-06-06T23:53:04,534 copying ./fsl_sub_mgh.py -> build/lib/freesurfer 2026-06-06T23:53:04,536 copying ./mri_hires_register.py -> build/lib/freesurfer 2026-06-06T23:53:04,539 copying ./mris_curvature.py -> build/lib/freesurfer 2026-06-06T23:53:04,541 copying ./mris_aa_shrinkwrap.py -> build/lib/freesurfer 2026-06-06T23:53:04,544 copying ./mri_synthstrip.py -> build/lib/freesurfer 2026-06-06T23:53:04,546 copying ./mkmnc_index_tcl.py -> build/lib/freesurfer 2026-06-06T23:53:04,548 copying ./mris_multiscale_stats.py -> build/lib/freesurfer 2026-06-06T23:53:04,551 copying ./fs_run_from_mcr.py -> build/lib/freesurfer 2026-06-06T23:53:04,553 copying ./mri_fdr.py -> build/lib/freesurfer 2026-06-06T23:53:04,555 copying ./mris_congeal.py -> build/lib/freesurfer 2026-06-06T23:53:04,558 copying ./mri_binarize.py -> build/lib/freesurfer 2026-06-06T23:53:04,560 copying ./seg2recon.py -> build/lib/freesurfer 2026-06-06T23:53:04,563 copying ./mris_mef_surfaces.py -> build/lib/freesurfer 2026-06-06T23:53:04,565 copying ./mri_stats2seg.py -> build/lib/freesurfer 2026-06-06T23:53:04,567 copying ./unpackimadir2.py -> build/lib/freesurfer 2026-06-06T23:53:04,570 copying ./mri_concat.py -> build/lib/freesurfer 2026-06-06T23:53:04,573 copying ./thickdiffmap.py -> build/lib/freesurfer 2026-06-06T23:53:04,575 copying ./rca_config.py -> build/lib/freesurfer 2026-06-06T23:53:04,577 copying ./mri_aparc2wmseg.py -> build/lib/freesurfer 2026-06-06T23:53:04,580 copying ./slicedelay.py -> build/lib/freesurfer 2026-06-06T23:53:04,582 copying ./fsrealpath.py -> build/lib/freesurfer 2026-06-06T23:53:04,584 copying ./long_create_orig.py -> build/lib/freesurfer 2026-06-06T23:53:04,587 copying ./mri_hausdorff_dist.py -> build/lib/freesurfer 2026-06-06T23:53:04,590 copying ./mri_paint.py -> build/lib/freesurfer 2026-06-06T23:53:04,592 copying ./dmri_stats_ac.py -> build/lib/freesurfer 2026-06-06T23:53:04,595 copying ./xsanatreg.py -> build/lib/freesurfer 2026-06-06T23:53:04,597 copying ./wm_anat_snr.py -> build/lib/freesurfer 2026-06-06T23:53:04,599 copying ./mri_gtmseg.py -> build/lib/freesurfer 2026-06-06T23:53:04,602 copying ./mri_strip_subject_info.py -> build/lib/freesurfer 2026-06-06T23:53:04,605 copying ./mri_probe_ima.py -> build/lib/freesurfer 2026-06-06T23:53:04,607 copying ./parc_atlas_jackknife_test.py -> build/lib/freesurfer 2026-06-06T23:53:04,610 copying ./rtview.py -> build/lib/freesurfer 2026-06-06T23:53:04,612 copying ./inflate_subject_new.py -> build/lib/freesurfer 2026-06-06T23:53:04,615 copying ./mri_reduce.py -> build/lib/freesurfer 2026-06-06T23:53:04,617 copying ./unpack_ima1_tcl.py -> build/lib/freesurfer 2026-06-06T23:53:04,619 copying ./sbtiv.py -> build/lib/freesurfer 2026-06-06T23:53:04,622 copying ./stattablediff.py -> build/lib/freesurfer 2026-06-06T23:53:04,625 copying ./dcmunpack.py -> build/lib/freesurfer 2026-06-06T23:53:04,627 copying ./mri_compute_distances.py -> build/lib/freesurfer 2026-06-06T23:53:04,630 copying ./mrisp_write.py -> build/lib/freesurfer 2026-06-06T23:53:04,633 copying ./mris_thickness.py -> build/lib/freesurfer 2026-06-06T23:53:04,635 copying ./tal_qc_azs.py -> build/lib/freesurfer 2026-06-06T23:53:04,637 copying ./vertexvol.py -> build/lib/freesurfer 2026-06-06T23:53:04,640 copying ./mris_remove_negative_vertices.py -> build/lib/freesurfer 2026-06-06T23:53:04,642 copying ./long_submit_jobs.py -> build/lib/freesurfer 2026-06-06T23:53:04,645 copying ./mris_convert.py -> build/lib/freesurfer 2026-06-06T23:53:04,648 copying ./reg2subject.py -> build/lib/freesurfer 2026-06-06T23:53:04,650 copying ./mri_fslmat_to_lta.py -> build/lib/freesurfer 2026-06-06T23:53:04,652 copying ./mri_refine_seg.py -> build/lib/freesurfer 2026-06-06T23:53:04,654 copying ./sphere_subject_rh.py -> build/lib/freesurfer 2026-06-06T23:53:04,656 copying ./gcainit.py -> build/lib/freesurfer 2026-06-06T23:53:04,658 copying ./qatools_py.py -> build/lib/freesurfer 2026-06-06T23:53:04,660 copying ./fs_temp_file.py -> build/lib/freesurfer 2026-06-06T23:53:04,662 copying ./long_stats_tps.py -> build/lib/freesurfer 2026-06-06T23:53:04,664 copying ./pctsurfcon.py -> build/lib/freesurfer 2026-06-06T23:53:04,666 copying ./dmri_train.py -> build/lib/freesurfer 2026-06-06T23:53:04,669 copying ./groupstatsdiff.py -> build/lib/freesurfer 2026-06-06T23:53:04,671 copying ./mris_wm_volume.py -> build/lib/freesurfer 2026-06-06T23:53:04,673 copying ./diffusion_utils.py -> build/lib/freesurfer 2026-06-06T23:53:04,675 copying ./dmri_neighboring_regions.py -> build/lib/freesurfer 2026-06-06T23:53:04,678 copying ./compute_label_volumes_csh.py -> build/lib/freesurfer 2026-06-06T23:53:04,680 copying ./morph_only_subject_lh.py -> build/lib/freesurfer 2026-06-06T23:53:04,682 copying ./mri_remove_neck.py -> build/lib/freesurfer 2026-06-06T23:53:04,684 copying ./mris_reposition_surface.py -> build/lib/freesurfer 2026-06-06T23:53:04,687 copying ./t4imgs_4dfp.py -> build/lib/freesurfer 2026-06-06T23:53:04,689 copying ./dcmsplit.py -> build/lib/freesurfer 2026-06-06T23:53:04,692 copying ./mris_pmake.py -> build/lib/freesurfer 2026-06-06T23:53:04,694 copying ./talairach_mgh.py -> build/lib/freesurfer 2026-06-06T23:53:04,697 copying ./anatomi_cuts_utils.py -> build/lib/freesurfer 2026-06-06T23:53:04,699 copying ./mris_segment.py -> build/lib/freesurfer 2026-06-06T23:53:04,701 copying ./mri_motion_correct.py -> build/lib/freesurfer 2026-06-06T23:53:04,703 copying ./mri_seg_diff.py -> build/lib/freesurfer 2026-06-06T23:53:04,705 copying ./mri_easywarp.py -> build/lib/freesurfer 2026-06-06T23:53:04,707 copying ./listsubj.py -> build/lib/freesurfer 2026-06-06T23:53:04,709 copying ./mris_extract_patches.py -> build/lib/freesurfer 2026-06-06T23:53:04,712 copying ./mri_funcvits.py -> build/lib/freesurfer 2026-06-06T23:53:04,714 copying ./mri_polv.py -> build/lib/freesurfer 2026-06-06T23:53:04,716 copying ./mris_interpolate_warp.py -> build/lib/freesurfer 2026-06-06T23:53:04,718 copying ./fs_temp_dir.py -> build/lib/freesurfer 2026-06-06T23:53:04,720 copying ./v_3dvolreg_afni.py -> build/lib/freesurfer 2026-06-06T23:53:04,722 copying ./bedpostx_mgh.py -> build/lib/freesurfer 2026-06-06T23:53:04,725 copying ./mri_surfacemask.py -> build/lib/freesurfer 2026-06-06T23:53:04,727 copying ./mri_segment.py -> build/lib/freesurfer 2026-06-06T23:53:04,730 copying ./mri_compute_volume_fractions.py -> build/lib/freesurfer 2026-06-06T23:53:04,732 copying ./mris_multimodal_surface_placement.py -> build/lib/freesurfer 2026-06-06T23:53:04,735 copying ./exvivo_hemi_proc.py -> build/lib/freesurfer 2026-06-06T23:53:04,737 copying ./seg2filled.py -> build/lib/freesurfer 2026-06-06T23:53:04,739 copying ./mri_extract_fcd_features.py -> build/lib/freesurfer 2026-06-06T23:53:04,742 copying ./wmsaseg.py -> build/lib/freesurfer 2026-06-06T23:53:04,744 copying ./mris_copy_header.py -> build/lib/freesurfer 2026-06-06T23:53:04,746 copying ./stem2fname.py -> build/lib/freesurfer 2026-06-06T23:53:04,748 copying ./mri_vol2surf.py -> build/lib/freesurfer 2026-06-06T23:53:04,751 copying ./mri_sbbr.py -> build/lib/freesurfer 2026-06-06T23:53:04,753 copying ./mris_distance_transform.py -> build/lib/freesurfer 2026-06-06T23:53:04,756 copying ./mri_label_volume.py -> build/lib/freesurfer 2026-06-06T23:53:04,758 copying ./mris_divide_parcellation.py -> build/lib/freesurfer 2026-06-06T23:53:04,761 copying ./getfullpath.py -> build/lib/freesurfer 2026-06-06T23:53:04,762 copying ./mkxsubjreg.py -> build/lib/freesurfer 2026-06-06T23:53:04,765 copying ./xhemi_tal.py -> build/lib/freesurfer 2026-06-06T23:53:04,767 copying ./mri_edit_segmentation_with_surfaces.py -> build/lib/freesurfer 2026-06-06T23:53:04,769 copying ./make_segvol_table.py -> build/lib/freesurfer 2026-06-06T23:53:04,771 copying ./mri_diff.py -> build/lib/freesurfer 2026-06-06T23:53:04,774 copying ./register_subject_flash.py -> build/lib/freesurfer 2026-06-06T23:53:04,776 copying ./inflate_subject_lh.py -> build/lib/freesurfer 2026-06-06T23:53:04,778 copying ./apply_morph.py -> build/lib/freesurfer 2026-06-06T23:53:04,781 copying ./mris_volmask.py -> build/lib/freesurfer 2026-06-06T23:53:04,783 copying ./inflate_subject.py -> build/lib/freesurfer 2026-06-06T23:53:04,785 copying ./mris_surf2vtk.py -> build/lib/freesurfer 2026-06-06T23:53:04,788 copying ./segment_thalamic_nuclei.py -> build/lib/freesurfer 2026-06-06T23:53:04,790 copying ./test_orientation_planes_from_parcellation.py -> build/lib/freesurfer 2026-06-06T23:53:04,792 copying ./mris_make_surfaces.py -> build/lib/freesurfer 2026-06-06T23:53:04,795 copying ./mris_init_global_tractography.py -> build/lib/freesurfer 2026-06-06T23:53:04,797 copying ./mri_surf2vol.py -> build/lib/freesurfer 2026-06-06T23:53:04,799 copying ./make_hemi_mask.py -> build/lib/freesurfer 2026-06-06T23:53:04,802 copying ./mri_add_new_tp.py -> build/lib/freesurfer 2026-06-06T23:53:04,804 copying ./dmri_violin_plots.py -> build/lib/freesurfer 2026-06-06T23:53:04,806 copying ./dmri_forrest.py -> build/lib/freesurfer 2026-06-06T23:53:04,808 copying ./deface_subject.py -> build/lib/freesurfer 2026-06-06T23:53:04,810 copying ./fs_time.py -> build/lib/freesurfer 2026-06-06T23:53:04,812 copying ./mris_compute_overlap.py -> build/lib/freesurfer 2026-06-06T23:53:04,814 copying ./mri_brainvol_stats.py -> build/lib/freesurfer 2026-06-06T23:53:04,816 copying ./make_average_surface.py -> build/lib/freesurfer 2026-06-06T23:53:04,820 copying ./isolate_labels_csh.py -> build/lib/freesurfer 2026-06-06T23:53:04,823 copying ./tridec.py -> build/lib/freesurfer 2026-06-06T23:53:04,826 copying ./mri_transform.py -> build/lib/freesurfer 2026-06-06T23:53:04,829 copying ./run_samseg_long.py -> build/lib/freesurfer 2026-06-06T23:53:04,832 copying ./mni152reg.py -> build/lib/freesurfer 2026-06-06T23:53:04,834 copying ./vsm_smooth.py -> build/lib/freesurfer 2026-06-06T23:53:04,837 copying ./browse_minc_header_tcl.py -> build/lib/freesurfer 2026-06-06T23:53:04,840 copying ./dmri_group.py -> build/lib/freesurfer 2026-06-06T23:53:04,843 copying ./dmri_mergepaths.py -> build/lib/freesurfer 2026-06-06T23:53:04,846 copying ./mri_segstats.py -> build/lib/freesurfer 2026-06-06T23:53:04,850 copying ./mri_create_tests.py -> build/lib/freesurfer 2026-06-06T23:53:04,853 copying ./dmri_anatomi_cuts.py -> build/lib/freesurfer 2026-06-06T23:53:04,856 copying ./mris_extract_values.py -> build/lib/freesurfer 2026-06-06T23:53:04,859 copying ./mri_create_t2combined.py -> build/lib/freesurfer 2026-06-06T23:53:04,862 copying ./mris_label_area.py -> build/lib/freesurfer 2026-06-06T23:53:04,865 copying ./mri_motion_correct2.py -> build/lib/freesurfer 2026-06-06T23:53:04,868 copying ./check_recons_sh.py -> build/lib/freesurfer 2026-06-06T23:53:04,870 copying ./mri_relabel_hypointensities.py -> build/lib/freesurfer 2026-06-06T23:53:04,873 copying ./mri_copy_params.py -> build/lib/freesurfer 2026-06-06T23:53:04,876 copying ./segment_subject_notal2.py -> build/lib/freesurfer 2026-06-06T23:53:04,879 copying ./morph_subject_lh.py -> build/lib/freesurfer 2026-06-06T23:53:04,882 copying ./flirt_newdefault_20080811_sch.py -> build/lib/freesurfer 2026-06-06T23:53:04,884 copying ./asegstatsdiff.py -> build/lib/freesurfer 2026-06-06T23:53:04,887 copying ./morph_rgb_rh.py -> build/lib/freesurfer 2026-06-06T23:53:04,890 copying ./spline3_test.py -> build/lib/freesurfer 2026-06-06T23:53:04,893 copying ./mri_compute_change_map.py -> build/lib/freesurfer 2026-06-06T23:53:04,895 copying ./reregister_subject_mixed.py -> build/lib/freesurfer 2026-06-06T23:53:04,898 copying ./mri_glmfit_sim.py -> build/lib/freesurfer 2026-06-06T23:53:04,902 copying ./mris_rotate.py -> build/lib/freesurfer 2026-06-06T23:53:04,905 copying ./ants_n4_bias_field_correction_fs.py -> build/lib/freesurfer 2026-06-06T23:53:04,908 copying ./mri_glmfit.py -> build/lib/freesurfer 2026-06-06T23:53:04,912 copying ./create_morph.py -> build/lib/freesurfer 2026-06-06T23:53:04,916 copying ./ico_supersample.py -> build/lib/freesurfer 2026-06-06T23:53:04,918 copying ./mri_extract.py -> build/lib/freesurfer 2026-06-06T23:53:04,921 copying ./fs_check_version.py -> build/lib/freesurfer 2026-06-06T23:53:04,923 copying ./mri_ca_label.py -> build/lib/freesurfer 2026-06-06T23:53:04,926 copying ./mris_parcellate_connectivity.py -> build/lib/freesurfer 2026-06-06T23:53:04,928 copying ./mksubjdirs.py -> build/lib/freesurfer 2026-06-06T23:53:04,931 copying ./make_average_volume.py -> build/lib/freesurfer 2026-06-06T23:53:04,933 copying ./mris_target_pos.py -> build/lib/freesurfer 2026-06-06T23:53:04,936 copying ./segment_ha_t1_sh.py -> build/lib/freesurfer 2026-06-06T23:53:04,938 copying ./mri_or.py -> build/lib/freesurfer 2026-06-06T23:53:04,940 copying ./mri_entowm_seg.py -> build/lib/freesurfer 2026-06-06T23:53:04,943 copying ./mri_probedicom.py -> build/lib/freesurfer 2026-06-06T23:53:04,946 copying ./dmri_match.py -> build/lib/freesurfer 2026-06-06T23:53:04,948 copying ./mri_fuse_intensity_images.py -> build/lib/freesurfer 2026-06-06T23:53:04,951 copying ./regdat2xfm.py -> build/lib/freesurfer 2026-06-06T23:53:04,954 copying ./mri_surf2volseg.py -> build/lib/freesurfer 2026-06-06T23:53:04,956 copying ./mris_transform.py -> build/lib/freesurfer 2026-06-06T23:53:04,959 copying ./mri_path2label.py -> build/lib/freesurfer 2026-06-06T23:53:04,961 copying ./map_all_labels.py -> build/lib/freesurfer 2026-06-06T23:53:04,963 copying ./mri_gradient_info.py -> build/lib/freesurfer 2026-06-06T23:53:04,965 copying ./mris_annot_to_segmentation.py -> build/lib/freesurfer 2026-06-06T23:53:04,967 copying ./mri_rigid_register.py -> build/lib/freesurfer 2026-06-06T23:53:04,969 copying ./quantify_thalamic_nuclei_sh.py -> build/lib/freesurfer 2026-06-06T23:53:04,972 copying ./isnifti.py -> build/lib/freesurfer 2026-06-06T23:53:04,973 copying ./freeview.py -> build/lib/freesurfer 2026-06-06T23:53:04,975 copying ./feat2segstats.py -> build/lib/freesurfer 2026-06-06T23:53:04,978 copying ./list_otl_labels.py -> build/lib/freesurfer 2026-06-06T23:53:04,980 copying ./print_unique_labels_csh.py -> build/lib/freesurfer 2026-06-06T23:53:04,982 copying ./mri_edit_segmentation.py -> build/lib/freesurfer 2026-06-06T23:53:04,984 copying ./mris_simulate_atrophy.py -> build/lib/freesurfer 2026-06-06T23:53:04,986 copying ./segment_subject.py -> build/lib/freesurfer 2026-06-06T23:53:04,988 copying ./wmedits2surf.py -> build/lib/freesurfer 2026-06-06T23:53:04,991 copying ./mri_topologycorrection.py -> build/lib/freesurfer 2026-06-06T23:53:04,993 copying ./mris_surface_to_vol_distances.py -> build/lib/freesurfer 2026-06-06T23:53:04,996 copying ./make_average_subject.py -> build/lib/freesurfer 2026-06-06T23:53:04,999 copying ./dmri_colored_fa.py -> build/lib/freesurfer 2026-06-06T23:53:05,001 copying ./fix_subject.py -> build/lib/freesurfer 2026-06-06T23:53:05,003 copying ./rcbf_prep.py -> build/lib/freesurfer 2026-06-06T23:53:05,006 copying ./mri_dct_align.py -> build/lib/freesurfer 2026-06-06T23:53:05,009 copying ./mri_mask.py -> build/lib/freesurfer 2026-06-06T23:53:05,011 copying ./unpacksdcmdir.py -> build/lib/freesurfer 2026-06-06T23:53:05,014 copying ./gca_apply.py -> build/lib/freesurfer 2026-06-06T23:53:05,017 copying ./tkregister2.py -> build/lib/freesurfer 2026-06-06T23:53:05,020 copying ./mri_mcsim.py -> build/lib/freesurfer 2026-06-06T23:53:05,023 copying ./tksurfer.py -> build/lib/freesurfer 2026-06-06T23:53:05,025 copying ./dmri_bset.py -> build/lib/freesurfer 2026-06-06T23:53:05,028 copying ./mris_thickness_comparison.py -> build/lib/freesurfer 2026-06-06T23:53:05,031 copying ./mri_normalize_tp2.py -> build/lib/freesurfer 2026-06-06T23:53:05,033 copying ./mri_strip_nonwhite.py -> build/lib/freesurfer 2026-06-06T23:53:05,036 copying ./mri_ribbon.py -> build/lib/freesurfer 2026-06-06T23:53:05,039 copying ./mri_cc.py -> build/lib/freesurfer 2026-06-06T23:53:05,041 copying ./dmri_group_by_endpoints.py -> build/lib/freesurfer 2026-06-06T23:53:05,044 copying ./fsl_label2voxel.py -> build/lib/freesurfer 2026-06-06T23:53:05,047 copying ./mris_rf_label.py -> build/lib/freesurfer 2026-06-06T23:53:05,049 copying ./talairach_avi.py -> build/lib/freesurfer 2026-06-06T23:53:05,052 copying ./optseq2.py -> build/lib/freesurfer 2026-06-06T23:53:05,055 copying ./mris_curvature2image.py -> build/lib/freesurfer 2026-06-06T23:53:05,058 copying ./dmri_paths.py -> build/lib/freesurfer 2026-06-06T23:53:05,061 copying ./vno_match_check.py -> build/lib/freesurfer 2026-06-06T23:53:05,064 copying ./merge_stats_tables.py -> build/lib/freesurfer 2026-06-06T23:53:05,066 copying ./mri_correct_segmentations.py -> build/lib/freesurfer 2026-06-06T23:53:05,068 copying ./mris_distance_to_label.py -> build/lib/freesurfer 2026-06-06T23:53:05,071 copying ./fsvglrun.py -> build/lib/freesurfer 2026-06-06T23:53:05,073 copying ./make_cortex_label.py -> build/lib/freesurfer 2026-06-06T23:53:05,076 copying ./mris_left_right_register.py -> build/lib/freesurfer 2026-06-06T23:53:05,078 copying ./mri_stopmask.py -> build/lib/freesurfer 2026-06-06T23:53:05,080 copying ./groupstats.py -> build/lib/freesurfer 2026-06-06T23:53:05,083 copying ./trac_paths.py -> build/lib/freesurfer 2026-06-06T23:53:05,085 copying ./renormalize_t1_subject.py -> build/lib/freesurfer 2026-06-06T23:53:05,087 copying ./samseg.py -> build/lib/freesurfer 2026-06-06T23:53:05,090 copying ./ms_refine_subject.py -> build/lib/freesurfer 2026-06-06T23:53:05,092 copying ./mris_image2vtk.py -> build/lib/freesurfer 2026-06-06T23:53:05,094 copying ./mris_sample_label.py -> build/lib/freesurfer 2026-06-06T23:53:05,097 copying ./minc2seqinfo.py -> build/lib/freesurfer 2026-06-06T23:53:05,099 copying ./mri_distance_transform.py -> build/lib/freesurfer 2026-06-06T23:53:05,101 copying ./mris_ms_refine.py -> build/lib/freesurfer 2026-06-06T23:53:05,104 copying ./mri_fieldsign.py -> build/lib/freesurfer 2026-06-06T23:53:05,107 copying ./rbbr.py -> build/lib/freesurfer 2026-06-06T23:53:05,109 copying ./mri_segcentroids.py -> build/lib/freesurfer 2026-06-06T23:53:05,111 copying ./mris_watershed.py -> build/lib/freesurfer 2026-06-06T23:53:05,113 copying ./mri_compile_edits.py -> build/lib/freesurfer 2026-06-06T23:53:05,116 copying ./fs_print_help.py -> build/lib/freesurfer 2026-06-06T23:53:05,118 copying ./labels_intersect.py -> build/lib/freesurfer 2026-06-06T23:53:05,120 copying ./dmri_vox2vox.py -> build/lib/freesurfer 2026-06-06T23:53:05,123 copying ./mri_annotation2label.py -> build/lib/freesurfer 2026-06-06T23:53:05,125 copying ./fvcompare.py -> build/lib/freesurfer 2026-06-06T23:53:05,128 copying ./hiam_register.py -> build/lib/freesurfer 2026-06-06T23:53:05,130 copying ./mris_expand.py -> build/lib/freesurfer 2026-06-06T23:53:05,133 copying ./mri_segreg.py -> build/lib/freesurfer 2026-06-06T23:53:05,135 copying ./defect2seg.py -> build/lib/freesurfer 2026-06-06T23:53:05,138 copying ./reconbatchjobs.py -> build/lib/freesurfer 2026-06-06T23:53:05,140 copying ./mri_label2vol.py -> build/lib/freesurfer 2026-06-06T23:53:05,143 copying ./fscalc.py -> build/lib/freesurfer 2026-06-06T23:53:05,145 copying ./mris_fill.py -> build/lib/freesurfer 2026-06-06T23:53:05,147 copying ./tkmeditfv.py -> build/lib/freesurfer 2026-06-06T23:53:05,150 copying ./fsdcmdecompress.py -> build/lib/freesurfer 2026-06-06T23:53:05,152 copying ./mri_warp_convert.py -> build/lib/freesurfer 2026-06-06T23:53:05,155 copying ./label2flat.py -> build/lib/freesurfer 2026-06-06T23:53:05,157 copying ./gauss_4dfp.py -> build/lib/freesurfer 2026-06-06T23:53:05,159 copying ./fspalm.py -> build/lib/freesurfer 2026-06-06T23:53:05,162 copying ./mri_cvs_register.py -> build/lib/freesurfer 2026-06-06T23:53:05,165 copying ./mri_fwhm.py -> build/lib/freesurfer 2026-06-06T23:53:05,167 copying ./mris_label_mode.py -> build/lib/freesurfer 2026-06-06T23:53:05,170 copying ./mri_copy_values.py -> build/lib/freesurfer 2026-06-06T23:53:05,172 copying ./mri_exvivo_norm.py -> build/lib/freesurfer 2026-06-06T23:53:05,175 copying ./register_child.py -> build/lib/freesurfer 2026-06-06T23:53:05,177 copying ./ventfix.py -> build/lib/freesurfer 2026-06-06T23:53:05,179 copying ./samsegmesh2surf.py -> build/lib/freesurfer 2026-06-06T23:53:05,182 copying ./gtmseg.py -> build/lib/freesurfer 2026-06-06T23:53:05,184 copying ./oct_register_mosaic.py -> build/lib/freesurfer 2026-06-06T23:53:05,187 copying ./mri_seghead.py -> build/lib/freesurfer 2026-06-06T23:53:05,189 copying ./t4img_4dfp.py -> build/lib/freesurfer 2026-06-06T23:53:05,192 copying ./test_recon_all_csh.py -> build/lib/freesurfer 2026-06-06T23:53:05,194 copying ./mri_wbc.py -> build/lib/freesurfer 2026-06-06T23:53:05,197 copying ./dicom_rename.py -> build/lib/freesurfer 2026-06-06T23:53:05,199 copying ./mri_edit_wm_with_aseg.py -> build/lib/freesurfer 2026-06-06T23:53:05,202 copying ./mris_distance_map.py -> build/lib/freesurfer 2026-06-06T23:53:05,204 copying ./mri_dct_align_binary.py -> build/lib/freesurfer 2026-06-06T23:53:05,207 copying ./run_mris_preproc.py -> build/lib/freesurfer 2026-06-06T23:53:05,209 copying ./mri_morphology.py -> build/lib/freesurfer 2026-06-06T23:53:05,211 copying ./mri_apply_bias.py -> build/lib/freesurfer 2026-06-06T23:53:05,213 copying ./aparcstats2table.py -> build/lib/freesurfer 2026-06-06T23:53:05,216 copying ./dcmdrle_fs.py -> build/lib/freesurfer 2026-06-06T23:53:05,218 copying ./morph_subject.py -> build/lib/freesurfer 2026-06-06T23:53:05,220 copying ./mris_jacobian.py -> build/lib/freesurfer 2026-06-06T23:53:05,222 copying ./make_upright.py -> build/lib/freesurfer 2026-06-06T23:53:05,224 copying ./fsr_getxopts.py -> build/lib/freesurfer 2026-06-06T23:53:05,226 copying ./apas2aseg.py -> build/lib/freesurfer 2026-06-06T23:53:05,228 copying ./mri_nlfilter.py -> build/lib/freesurfer 2026-06-06T23:53:05,231 copying ./mri_aparc2aseg.py -> build/lib/freesurfer 2026-06-06T23:53:05,234 copying ./mri_jacobian.py -> build/lib/freesurfer 2026-06-06T23:53:05,236 copying ./mri_volsynth.py -> build/lib/freesurfer 2026-06-06T23:53:05,239 copying ./long_stats_slopes.py -> build/lib/freesurfer 2026-06-06T23:53:05,242 copying ./mris_rf_train.py -> build/lib/freesurfer 2026-06-06T23:53:05,244 copying ./segment_thalamic_nuclei_sh.py -> build/lib/freesurfer 2026-06-06T23:53:05,247 copying ./segpons.py -> build/lib/freesurfer 2026-06-06T23:53:05,249 copying ./brec.py -> build/lib/freesurfer 2026-06-06T23:53:05,251 copying ./spmregister.py -> build/lib/freesurfer 2026-06-06T23:53:05,254 copying ./mris_curvature_stats.py -> build/lib/freesurfer 2026-06-06T23:53:05,257 copying ./mris_compute_parc_overlap.py -> build/lib/freesurfer 2026-06-06T23:53:05,259 copying ./reinflate_subject_lh.py -> build/lib/freesurfer 2026-06-06T23:53:05,262 copying ./__init__.py -> build/lib/freesurfer 2026-06-06T23:53:05,265 copying ./mris_annot_diff.py -> build/lib/freesurfer 2026-06-06T23:53:05,268 copying ./xcerebralseg.py -> build/lib/freesurfer 2026-06-06T23:53:05,270 copying ./mris_euler_number.py -> build/lib/freesurfer 2026-06-06T23:53:05,272 copying ./segment_subject_old_skull_strip.py -> build/lib/freesurfer 2026-06-06T23:53:05,275 copying ./mris_average_curvature.py -> build/lib/freesurfer 2026-06-06T23:53:05,277 copying ./train_gcs_atlas.py -> build/lib/freesurfer 2026-06-06T23:53:05,279 copying ./unpackmincdir.py -> build/lib/freesurfer 2026-06-06T23:53:05,282 copying ./mris_volsmooth.py -> build/lib/freesurfer 2026-06-06T23:53:05,284 copying ./fixup_mni_paths.py -> build/lib/freesurfer 2026-06-06T23:53:05,287 copying ./rca_config2csh.py -> build/lib/freesurfer 2026-06-06T23:53:05,289 copying ./mri_em_register.py -> build/lib/freesurfer 2026-06-06T23:53:05,292 copying ./setlabelstat.py -> build/lib/freesurfer 2026-06-06T23:53:05,294 copying ./fix_subject_corrected.py -> build/lib/freesurfer 2026-06-06T23:53:05,296 copying ./xhemireg.py -> build/lib/freesurfer 2026-06-06T23:53:05,299 copying ./rca_base_init.py -> build/lib/freesurfer 2026-06-06T23:53:05,301 copying ./mri_fit_bias.py -> build/lib/freesurfer 2026-06-06T23:53:05,303 copying ./mri_reorient_lr_csh.py -> build/lib/freesurfer 2026-06-06T23:53:05,306 copying ./mri_segment_thalamic_nuclei_dti_cnn.py -> build/lib/freesurfer 2026-06-06T23:53:05,308 copying ./mri_linear_align_binary.py -> build/lib/freesurfer 2026-06-06T23:53:05,311 copying ./trk_tools.py -> build/lib/freesurfer 2026-06-06T23:53:05,313 copying ./mri_label2label.py -> build/lib/freesurfer 2026-06-06T23:53:05,316 copying ./mris_sample_parc.py -> build/lib/freesurfer 2026-06-06T23:53:05,319 copying ./csvprint.py -> build/lib/freesurfer 2026-06-06T23:53:05,321 copying ./renormalize_subject_keep_editting.py -> build/lib/freesurfer 2026-06-06T23:53:05,323 copying ./mri_cvs_check.py -> build/lib/freesurfer 2026-06-06T23:53:05,325 copying ./extract_seg_waveform.py -> build/lib/freesurfer 2026-06-06T23:53:05,328 copying ./run_segment_subject_t2_auto_estimate_alveus_ml_sh.py -> build/lib/freesurfer 2026-06-06T23:53:05,330 copying ./long_stats_combine.py -> build/lib/freesurfer 2026-06-06T23:53:05,333 copying ./aparc2feat.py -> build/lib/freesurfer 2026-06-06T23:53:05,335 copying ./gcatrainskull.py -> build/lib/freesurfer 2026-06-06T23:53:05,337 copying ./reg_mni305_2mm.py -> build/lib/freesurfer 2026-06-06T23:53:05,340 copying ./pointset2label.py -> build/lib/freesurfer 2026-06-06T23:53:05,342 copying ./fix_subject_rh.py -> build/lib/freesurfer 2026-06-06T23:53:05,345 copying ./irepifitvol.py -> build/lib/freesurfer 2026-06-06T23:53:05,347 copying ./mri_tessellate.py -> build/lib/freesurfer 2026-06-06T23:53:05,349 copying ./mris_entropy.py -> build/lib/freesurfer 2026-06-06T23:53:05,351 copying ./long_mris_slopes.py -> build/lib/freesurfer 2026-06-06T23:53:05,354 copying ./mris_hausdorff_dist.py -> build/lib/freesurfer 2026-06-06T23:53:05,356 copying ./polyorder.py -> build/lib/freesurfer 2026-06-06T23:53:05,358 copying ./run_samseg.py -> build/lib/freesurfer 2026-06-06T23:53:05,361 copying ./mris2rgb.py -> build/lib/freesurfer 2026-06-06T23:53:05,363 copying ./mri_nl_align_binary.py -> build/lib/freesurfer 2026-06-06T23:53:05,366 copying ./morph_rgb_lh.py -> build/lib/freesurfer 2026-06-06T23:53:05,368 copying ./isanalyze.py -> build/lib/freesurfer 2026-06-06T23:53:05,370 copying ./mri_rf_long_label.py -> build/lib/freesurfer 2026-06-06T23:53:05,372 copying ./mris_extract_main_component.py -> build/lib/freesurfer 2026-06-06T23:53:05,375 copying ./mri_ca_normalize.py -> build/lib/freesurfer 2026-06-06T23:53:05,378 copying ./gcatrain.py -> build/lib/freesurfer 2026-06-06T23:53:05,380 copying ./mri_average.py -> build/lib/freesurfer 2026-06-06T23:53:05,383 copying ./fix_subject_corrected_rh.py -> build/lib/freesurfer 2026-06-06T23:53:05,385 copying ./mris_register_label_map.py -> build/lib/freesurfer 2026-06-06T23:53:05,387 copying ./dmri_project_end_points.py -> build/lib/freesurfer 2026-06-06T23:53:05,390 copying ./mris_gradient.py -> build/lib/freesurfer 2026-06-06T23:53:05,392 copying ./mris_ca_train.py -> build/lib/freesurfer 2026-06-06T23:53:05,395 copying ./mris_spherical_average.py -> build/lib/freesurfer 2026-06-06T23:53:05,398 copying ./stat_normalize.py -> build/lib/freesurfer 2026-06-06T23:53:05,400 copying ./mris_intensity_profile.py -> build/lib/freesurfer 2026-06-06T23:53:05,403 copying ./dcmdjpeg_fs.py -> build/lib/freesurfer 2026-06-06T23:53:05,406 copying ./surf2vol.py -> build/lib/freesurfer 2026-06-06T23:53:05,408 copying ./morph_only_subject.py -> build/lib/freesurfer 2026-06-06T23:53:05,411 copying ./mri_rf_label.py -> build/lib/freesurfer 2026-06-06T23:53:05,414 copying ./dmri_extract_surface_measurements.py -> build/lib/freesurfer 2026-06-06T23:53:05,417 copying ./reinflate_subject.py -> build/lib/freesurfer 2026-06-06T23:53:05,419 copying ./segment_subregions.py -> build/lib/freesurfer 2026-06-06T23:53:05,422 copying ./fiducials_correction.py -> build/lib/freesurfer 2026-06-06T23:53:05,424 copying ./check_subject.py -> build/lib/freesurfer 2026-06-06T23:53:05,426 copying ./segment_subject_t1_t2_auto_estimate_alveus_ml.py -> build/lib/freesurfer 2026-06-06T23:53:05,428 copying ./mri_synthsr.py -> build/lib/freesurfer 2026-06-06T23:53:05,431 copying ./mris_segmentation_stats.py -> build/lib/freesurfer 2026-06-06T23:53:05,434 copying ./v_4dfptoanalyze.py -> build/lib/freesurfer 2026-06-06T23:53:05,436 copying ./mri_synthmorph.py -> build/lib/freesurfer 2026-06-06T23:53:05,438 copying ./mri_mark_temporal_lobe.py -> build/lib/freesurfer 2026-06-06T23:53:05,441 copying ./is_lta.py -> build/lib/freesurfer 2026-06-06T23:53:05,443 copying ./map_to_base.py -> build/lib/freesurfer 2026-06-06T23:53:05,446 copying ./mris_anatomical_stats.py -> build/lib/freesurfer 2026-06-06T23:53:05,448 copying ./mris_ca_label.py -> build/lib/freesurfer 2026-06-06T23:53:05,451 copying ./mri_xvolavg.py -> build/lib/freesurfer 2026-06-06T23:53:05,454 copying ./mri_mergelabels.py -> build/lib/freesurfer 2026-06-06T23:53:05,456 copying ./mris_add_template.py -> build/lib/freesurfer 2026-06-06T23:53:05,458 copying ./bbmask.py -> build/lib/freesurfer 2026-06-06T23:53:05,462 copying ./mergeseg.py -> build/lib/freesurfer 2026-06-06T23:53:05,465 copying ./mris_warp.py -> build/lib/freesurfer 2026-06-06T23:53:05,467 copying ./quantify_h_asubregions_sh.py -> build/lib/freesurfer 2026-06-06T23:53:05,470 copying ./dcmdir_info_mgh.py -> build/lib/freesurfer 2026-06-06T23:53:05,473 copying ./mris_preproc.py -> build/lib/freesurfer 2026-06-06T23:53:05,476 copying ./get_label_thickness.py -> build/lib/freesurfer 2026-06-06T23:53:05,478 copying ./segment_subject_sc.py -> build/lib/freesurfer 2026-06-06T23:53:05,480 copying ./dmri_ac_sh.py -> build/lib/freesurfer 2026-06-06T23:53:05,482 copying ./cblumwmgyri.py -> build/lib/freesurfer 2026-06-06T23:53:05,485 copying ./fs_spmreg_glnxa64.py -> build/lib/freesurfer 2026-06-06T23:53:05,487 copying ./mris_ca_deform.py -> build/lib/freesurfer 2026-06-06T23:53:05,490 copying ./mris_flatten.py -> build/lib/freesurfer 2026-06-06T23:53:05,493 copying ./sratio.py -> build/lib/freesurfer 2026-06-06T23:53:05,495 copying ./mri_3d_photo_recon.py -> build/lib/freesurfer 2026-06-06T23:53:05,498 copying ./mris_refine_surfaces.py -> build/lib/freesurfer 2026-06-06T23:53:05,500 copying ./mri_compute_layer_fractions.py -> build/lib/freesurfer 2026-06-06T23:53:05,503 copying ./histo_synthesize.py -> build/lib/freesurfer 2026-06-06T23:53:05,506 copying ./segment_ha_t1_long_sh.py -> build/lib/freesurfer 2026-06-06T23:53:05,508 copying ./mri_surfcluster.py -> build/lib/freesurfer 2026-06-06T23:53:05,512 copying ./cor_to_minc.py -> build/lib/freesurfer 2026-06-06T23:53:05,514 copying ./mri_dist_surf_label.py -> build/lib/freesurfer 2026-06-06T23:53:05,517 copying ./check_mcr_sh.py -> build/lib/freesurfer 2026-06-06T23:53:05,519 copying ./mri_pretess.py -> build/lib/freesurfer 2026-06-06T23:53:05,522 copying ./mri_rf_long_train.py -> build/lib/freesurfer 2026-06-06T23:53:05,524 copying ./ants_denoise_image_fs.py -> build/lib/freesurfer 2026-06-06T23:53:05,527 copying ./mri_compute_volume_intensities.py -> build/lib/freesurfer 2026-06-06T23:53:05,529 copying ./mris_apply_reg.py -> build/lib/freesurfer 2026-06-06T23:53:05,532 copying ./mri_relabel_nonwm_hypos.py -> build/lib/freesurfer 2026-06-06T23:53:05,535 copying ./run_segment_subject_t1_auto_estimate_alveus_ml_sh.py -> build/lib/freesurfer 2026-06-06T23:53:05,537 copying ./recon_all.py -> build/lib/freesurfer 2026-06-06T23:53:05,541 copying ./mris_autodet_gwstats.py -> build/lib/freesurfer 2026-06-06T23:53:05,543 running egg_info 2026-06-06T23:53:05,553 writing niwrap_freesurfer.egg-info/PKG-INFO 2026-06-06T23:53:05,555 writing dependency_links to niwrap_freesurfer.egg-info/dependency_links.txt 2026-06-06T23:53:05,557 writing requirements to niwrap_freesurfer.egg-info/requires.txt 2026-06-06T23:53:05,558 writing top-level names to niwrap_freesurfer.egg-info/top_level.txt 2026-06-06T23:53:05,605 reading manifest file 'niwrap_freesurfer.egg-info/SOURCES.txt' 2026-06-06T23:53:05,739 writing manifest file 'niwrap_freesurfer.egg-info/SOURCES.txt' 2026-06-06T23:53:05,755 copying ./py.typed -> build/lib/freesurfer 2026-06-06T23:53:05,786 installing to build/bdist.linux-armv7l/wheel 2026-06-06T23:53:05,787 running install 2026-06-06T23:53:05,810 running install_lib 2026-06-06T23:53:05,815 creating build/bdist.linux-armv7l/wheel 2026-06-06T23:53:05,830 creating build/bdist.linux-armv7l/wheel/freesurfer 2026-06-06T23:53:05,831 copying build/lib/freesurfer/mri_matrix_multiply.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,834 copying build/lib/freesurfer/mri_z2p.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,836 copying build/lib/freesurfer/mri_label_vals.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,839 copying build/lib/freesurfer/aparc_stats_aseg.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,842 copying build/lib/freesurfer/mris_compute_lgi.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,844 copying build/lib/freesurfer/mideface.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,847 copying build/lib/freesurfer/talairach2.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,849 copying build/lib/freesurfer/wfilemask.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,851 copying build/lib/freesurfer/mri_compute_bias.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,853 copying build/lib/freesurfer/trac_preproc.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,856 copying build/lib/freesurfer/grad_unwarp.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,858 copying build/lib/freesurfer/mri_gdfglm.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,860 copying build/lib/freesurfer/zero_lt_4dfp.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,862 copying build/lib/freesurfer/fsl_5_0_2_xyztrans_sch.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,864 copying build/lib/freesurfer/samseg_long.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,867 copying build/lib/freesurfer/bugr.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,869 copying build/lib/freesurfer/mris_multimodal.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,871 copying build/lib/freesurfer/mri_nu_correct_mni.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,874 copying build/lib/freesurfer/mris_merge_parcellations.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,876 copying build/lib/freesurfer/mpr2mni305.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,878 copying build/lib/freesurfer/mris_fwhm.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,881 copying build/lib/freesurfer/run_segment_subject_t1_t2_auto_estimate_alveus_ml_sh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,883 copying build/lib/freesurfer/mris_register_to_volume.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,886 copying build/lib/freesurfer/sphere_subject.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,888 copying build/lib/freesurfer/jkgcatrain.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,890 copying build/lib/freesurfer/bmedits2surf.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,893 copying build/lib/freesurfer/mris_volmask_novtk.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,895 copying build/lib/freesurfer/mris_label2annot.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,898 copying build/lib/freesurfer/mri_cvs_data_copy.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,900 copying build/lib/freesurfer/post_recon_all.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,903 copying build/lib/freesurfer/histo_register_block.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,905 copying build/lib/freesurfer/mri_add_xform_to_header.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,907 copying build/lib/freesurfer/mris_estimate_wm.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,909 copying build/lib/freesurfer/mri_gradunwarp.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,912 copying build/lib/freesurfer/segment_ha_t2_sh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,914 copying build/lib/freesurfer/mris_topo_fixer.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,916 copying build/lib/freesurfer/mris_nudge.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,919 copying build/lib/freesurfer/mri_deface.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,921 copying build/lib/freesurfer/make_folding_atlas.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,923 copying build/lib/freesurfer/mrisp_paint.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,926 copying build/lib/freesurfer/recon_all_clinical_sh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,928 copying build/lib/freesurfer/mris_transmantle_dysplasia_paths.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,930 copying build/lib/freesurfer/mri_maps2csd.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,932 copying build/lib/freesurfer/mri_extract_label.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,935 copying build/lib/freesurfer/mris_calc.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,937 copying build/lib/freesurfer/meanval.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,939 copying build/lib/freesurfer/ifh2hdr.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,941 copying build/lib/freesurfer/mri_volcluster.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,944 copying build/lib/freesurfer/update_needed.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,946 copying build/lib/freesurfer/mris_remove_intersection.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,948 copying build/lib/freesurfer/plot_structure_stats_tcl.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,950 copying build/lib/freesurfer/py.typed -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,952 copying build/lib/freesurfer/dmri_save_histograms.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,954 copying build/lib/freesurfer/fslregister.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,956 copying build/lib/freesurfer/mris_seg2annot.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,958 copying build/lib/freesurfer/sphere_subject_lh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,960 copying build/lib/freesurfer/mri_easyreg.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,963 copying build/lib/freesurfer/mris_remove_variance.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,965 copying build/lib/freesurfer/mri_watershed.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,967 copying build/lib/freesurfer/fname2stem.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,969 copying build/lib/freesurfer/mri_joint_density.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,971 copying build/lib/freesurfer/analyzeto4dfp.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,973 copying build/lib/freesurfer/dmri_spline.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,976 copying build/lib/freesurfer/mris_sphere.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,978 copying build/lib/freesurfer/mris_diff.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,981 copying build/lib/freesurfer/is_surface.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,983 copying build/lib/freesurfer/dmri_trk2trk.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,985 copying build/lib/freesurfer/nmovie_qt.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,987 copying build/lib/freesurfer/mris_compute_volume_fractions.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,990 copying build/lib/freesurfer/mris_label_calc.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,992 copying build/lib/freesurfer/tractstats2table.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,994 copying build/lib/freesurfer/mri_twoclass.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,996 copying build/lib/freesurfer/sfa2fieldsign.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:05,999 copying build/lib/freesurfer/test_tutorials_sh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,001 copying build/lib/freesurfer/mris_register.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,004 copying build/lib/freesurfer/mris_smooth.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,007 copying build/lib/freesurfer/mris_rescale.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,009 copying build/lib/freesurfer/mri_extract_largest_cc.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,011 copying build/lib/freesurfer/mri_ca_tissue_parms.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,013 copying build/lib/freesurfer/recon_all_exvivo.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,015 copying build/lib/freesurfer/defect_seg.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,018 copying build/lib/freesurfer/mri_validate_skull_stripped.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,020 copying build/lib/freesurfer/cp_dicom.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,022 copying build/lib/freesurfer/fname2ext.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,024 copying build/lib/freesurfer/predict_v1_sh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,026 copying build/lib/freesurfer/tkregister2_cmdl.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,029 copying build/lib/freesurfer/inflate_subject_new_lh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,031 copying build/lib/freesurfer/rca_long_tp_init.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,033 copying build/lib/freesurfer/gcaprepone.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,035 copying build/lib/freesurfer/morph_tables_rh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,037 copying build/lib/freesurfer/talsegprob.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,039 copying build/lib/freesurfer/mri_linear_register.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,042 copying build/lib/freesurfer/mris_mesh_subdivide.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,044 copying build/lib/freesurfer/morph_tables_lh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,046 copying build/lib/freesurfer/mri_concatenate_lta.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,048 copying build/lib/freesurfer/swi_process.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,051 copying build/lib/freesurfer/mri_evaluate_morph.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,053 copying build/lib/freesurfer/mri_head.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,055 copying build/lib/freesurfer/talairach_afd.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,057 copying build/lib/freesurfer/mri_cal_renormalize_gca.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,060 copying build/lib/freesurfer/compute_interrater_variability_csh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,062 copying build/lib/freesurfer/mris_smooth_intracortical.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,064 copying build/lib/freesurfer/beta2sxa.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,066 copying build/lib/freesurfer/histo_compute_joint_density.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,068 copying build/lib/freesurfer/make_symmetric.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,071 copying build/lib/freesurfer/tkregisterfv.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,073 copying build/lib/freesurfer/fsl_rigid_register.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,076 copying build/lib/freesurfer/mri_ca_register.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,078 copying build/lib/freesurfer/tksurferfv.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,081 copying build/lib/freesurfer/export_gcam.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,083 copying build/lib/freesurfer/talairach.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,085 copying build/lib/freesurfer/aseg2feat.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,087 copying build/lib/freesurfer/mri_threshold.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,089 copying build/lib/freesurfer/mris_resample.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,091 copying build/lib/freesurfer/long_create_base_sigma.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,093 copying build/lib/freesurfer/mri_make_uchar.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,096 copying build/lib/freesurfer/mris_shrinkwrap.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,098 copying build/lib/freesurfer/reinflate_subject_rh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,100 copying build/lib/freesurfer/avi2talxfm.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,102 copying build/lib/freesurfer/mri_fill.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,104 copying build/lib/freesurfer/unpackimadir.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,107 copying build/lib/freesurfer/hiam_make_surfaces.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,109 copying build/lib/freesurfer/mris_profile_clustering.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,111 copying build/lib/freesurfer/tkmedit.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,113 copying build/lib/freesurfer/segment_subject_t1_auto_estimate_alveus_ml.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,115 copying build/lib/freesurfer/long_submit_postproc.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,118 copying build/lib/freesurfer/make_exvivo_filled.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,120 copying build/lib/freesurfer/mri_map_cpdat.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,122 copying build/lib/freesurfer/mri_modify.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,125 copying build/lib/freesurfer/longmc.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,127 copying build/lib/freesurfer/mri_align_long_csh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,129 copying build/lib/freesurfer/fsr_import.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,131 copying build/lib/freesurfer/mri_synthseg.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,134 copying build/lib/freesurfer/map_all_labels_lh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,136 copying build/lib/freesurfer/mri_gcab_train.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,138 copying build/lib/freesurfer/run_segment_thalamic_nuclei_sh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,140 copying build/lib/freesurfer/rca_fix_ento.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,143 copying build/lib/freesurfer/irepifitvol_glnx64.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,145 copying build/lib/freesurfer/mri_fuse_segmentations.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,147 copying build/lib/freesurfer/make_average_subcort.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,149 copying build/lib/freesurfer/mri_label_histo.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,152 copying build/lib/freesurfer/bblabel.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,154 copying build/lib/freesurfer/fs_update.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,156 copying build/lib/freesurfer/mris_make_face_parcellation.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,158 copying build/lib/freesurfer/fs_install_mcr.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,160 copying build/lib/freesurfer/mris_reverse.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,162 copying build/lib/freesurfer/mri_ca_train.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,164 copying build/lib/freesurfer/mris_inflate.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,167 copying build/lib/freesurfer/mri_vol2vol.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,169 copying build/lib/freesurfer/connected_components.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,172 copying build/lib/freesurfer/register_elderly_subject.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,174 copying build/lib/freesurfer/mris_volume.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,177 copying build/lib/freesurfer/register_subject.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,180 copying build/lib/freesurfer/segment_subject_t2_auto_estimate_alveus_ml.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,184 copying build/lib/freesurfer/mri_voldiff.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,187 copying build/lib/freesurfer/unpack_ima_tcl.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,189 copying build/lib/freesurfer/mri_make_bem_surfaces.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,192 copying build/lib/freesurfer/mris_make_template.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,194 copying build/lib/freesurfer/mri_parse_sdcmdir.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,196 copying build/lib/freesurfer/mri_segment_hypothalamic_subunits.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,199 copying build/lib/freesurfer/mri_compute_seg_overlap.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,201 copying build/lib/freesurfer/mri_synthsr_hyperfine.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,203 copying build/lib/freesurfer/build_desikan_killiany_gcs_csh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,205 copying build/lib/freesurfer/mris_segment_vals.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,207 copying build/lib/freesurfer/mris_info.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,210 copying build/lib/freesurfer/inflate_subject_sc.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,212 copying build/lib/freesurfer/vol2subfield.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,215 copying build/lib/freesurfer/mris_thickness_diff.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,218 copying build/lib/freesurfer/mri_exvivo_strip.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,220 copying build/lib/freesurfer/mri_cor2label.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,222 copying build/lib/freesurfer/mris_translate_annotation.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,225 copying build/lib/freesurfer/mris_ba_segment.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,227 copying build/lib/freesurfer/mris_place_surface.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,230 copying build/lib/freesurfer/reg_feat2anat.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,233 copying build/lib/freesurfer/mris_defects_pointset.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,235 copying build/lib/freesurfer/mri_defacer.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,238 copying build/lib/freesurfer/morph_subject_rh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,240 copying build/lib/freesurfer/lta_convert.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,242 copying build/lib/freesurfer/mris_make_average_surface.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,245 copying build/lib/freesurfer/mris_deform.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,247 copying build/lib/freesurfer/unpack_mnc_tcl.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,249 copying build/lib/freesurfer/xcorr.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,251 copying build/lib/freesurfer/run_segment_subfields_t1_longitudinal_sh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,254 copying build/lib/freesurfer/run_segment_subject_sh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,256 copying build/lib/freesurfer/mri_vol2label.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,258 copying build/lib/freesurfer/mri_coreg.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,261 copying build/lib/freesurfer/mkheadsurf.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,264 copying build/lib/freesurfer/bbregister.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,266 copying build/lib/freesurfer/conf2hires.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,269 copying build/lib/freesurfer/quantify_brainstem_structures_sh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,271 copying build/lib/freesurfer/mri_mi.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,273 copying build/lib/freesurfer/mksurfatlas.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,275 copying build/lib/freesurfer/mris_volmask_vtk.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,277 copying build/lib/freesurfer/compute_vox2vox.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,279 copying build/lib/freesurfer/mri_gtmpvc.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,282 copying build/lib/freesurfer/mri_surf2surf.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,285 copying build/lib/freesurfer/vol2symsurf.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,288 copying build/lib/freesurfer/mri_brain_volume.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,290 copying build/lib/freesurfer/annot2std.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,293 copying build/lib/freesurfer/lta_diff.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,295 copying build/lib/freesurfer/biasfield.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,297 copying build/lib/freesurfer/mri_log_likelihood.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,300 copying build/lib/freesurfer/segment_bs_sh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,301 copying build/lib/freesurfer/lpcregister.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,304 copying build/lib/freesurfer/fs_tutorial_data.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,306 copying build/lib/freesurfer/mri_info.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,309 copying build/lib/freesurfer/mri_train.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,311 copying build/lib/freesurfer/mri_linear_align.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,313 copying build/lib/freesurfer/asegstats2table.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,316 copying build/lib/freesurfer/label_subject.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,318 copying build/lib/freesurfer/inflate_subject_new_rh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,320 copying build/lib/freesurfer/remove_talairach.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,322 copying build/lib/freesurfer/flip_4dfp.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,324 copying build/lib/freesurfer/mris_surface_stats.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,326 copying build/lib/freesurfer/table2map.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,329 copying build/lib/freesurfer/fiducials_calibration.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,331 copying build/lib/freesurfer/mri_mc.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,333 copying build/lib/freesurfer/register_csh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,335 copying build/lib/freesurfer/mri_gcut.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,337 copying build/lib/freesurfer/mri_robust_template.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,340 copying build/lib/freesurfer/run_qdec_glm.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,342 copying build/lib/freesurfer/dt_recon.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,344 copying build/lib/freesurfer/mris_errors.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,346 copying build/lib/freesurfer/mri_nl_align.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,349 copying build/lib/freesurfer/mri_cnr.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,352 copying build/lib/freesurfer/vol2segavg.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,354 copying build/lib/freesurfer/mri_long_normalize.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,357 copying build/lib/freesurfer/mri_normalize.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,360 copying build/lib/freesurfer/mri_rf_train.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,362 copying build/lib/freesurfer/spm_t_to_b.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,364 copying build/lib/freesurfer/mris_niters2fwhm.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,367 copying build/lib/freesurfer/mri_robust_register.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,370 copying build/lib/freesurfer/mris_map_cuts.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,372 copying build/lib/freesurfer/label_elderly_subject.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,374 copying build/lib/freesurfer/segment_subfields_t1_longitudinal.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,376 copying build/lib/freesurfer/samseg2recon.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,379 copying build/lib/freesurfer/long_qdec_table.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,381 copying build/lib/freesurfer/aparcstatsdiff.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,383 copying build/lib/freesurfer/hiam_make_template.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,385 copying build/lib/freesurfer/mri_concatenate_gcam.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,388 copying build/lib/freesurfer/xfmrot.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,390 copying build/lib/freesurfer/mris_compute_acorr.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,393 copying build/lib/freesurfer/segment_subject_notal.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,395 copying build/lib/freesurfer/dmri_pathstats.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,398 copying build/lib/freesurfer/mmppsp.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,400 copying build/lib/freesurfer/labels_union.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,403 copying build/lib/freesurfer/inflate_subject_rh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,405 copying build/lib/freesurfer/labels_disjoint.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,408 copying build/lib/freesurfer/tal_compare.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,410 copying build/lib/freesurfer/feat2surf.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,412 copying build/lib/freesurfer/gems_compute_atlas_probs.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,415 copying build/lib/freesurfer/mri_and.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,418 copying build/lib/freesurfer/label_subject_mixed.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,420 copying build/lib/freesurfer/mris_compute_layer_intensities.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,422 copying build/lib/freesurfer/fs_lib_check.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,424 copying build/lib/freesurfer/mri_seg_overlap.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,426 copying build/lib/freesurfer/gdcmconv_fs.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,429 copying build/lib/freesurfer/mri_func2sph.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,431 copying build/lib/freesurfer/mri_synthesize.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,434 copying build/lib/freesurfer/mri_gca_ambiguous.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,436 copying build/lib/freesurfer/label2patch.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,439 copying build/lib/freesurfer/inflate_subject3.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,442 copying build/lib/freesurfer/mri_compute_overlap.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,445 copying build/lib/freesurfer/mkima_index_tcl.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,448 copying build/lib/freesurfer/mris_remesh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,451 copying build/lib/freesurfer/mri_histo_eq.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,454 copying build/lib/freesurfer/mri_sclimbic_seg.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,458 copying build/lib/freesurfer/mris_find_flat_regions.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,460 copying build/lib/freesurfer/mris_talairach.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,463 copying build/lib/freesurfer/mris_morph_stats.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,466 copying build/lib/freesurfer/surfreg.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,469 copying build/lib/freesurfer/mris_skeletonize.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,472 copying build/lib/freesurfer/swi_preprocess.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,475 copying build/lib/freesurfer/mris_register_to_label.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,479 copying build/lib/freesurfer/mri_vessel_segment.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,482 copying build/lib/freesurfer/mri_convert.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,485 copying build/lib/freesurfer/dmri_motion.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,488 copying build/lib/freesurfer/morph_only_subject_rh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,492 copying build/lib/freesurfer/map_central_sulcus.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,495 copying build/lib/freesurfer/trac_all.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,500 copying build/lib/freesurfer/imgreg_4dfp.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,503 copying build/lib/freesurfer/mri_ms_fitparms.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,507 copying build/lib/freesurfer/makevol.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,511 copying build/lib/freesurfer/orient_las.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,514 copying build/lib/freesurfer/fsr_coreg.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,517 copying build/lib/freesurfer/mris_fix_topology.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,521 copying build/lib/freesurfer/label_subject_flash.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,524 copying build/lib/freesurfer/mri_sph2surf.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,527 copying build/lib/freesurfer/isolate_labels_keeporigval_csh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,531 copying build/lib/freesurfer/segment_monkey.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,534 copying build/lib/freesurfer/mris_exvivo_surfaces.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,537 copying build/lib/freesurfer/fsl_sub_mgh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,540 copying build/lib/freesurfer/mri_hires_register.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,542 copying build/lib/freesurfer/mris_curvature.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,545 copying build/lib/freesurfer/mris_aa_shrinkwrap.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,548 copying build/lib/freesurfer/mri_synthstrip.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,550 copying build/lib/freesurfer/mkmnc_index_tcl.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,553 copying build/lib/freesurfer/mris_multiscale_stats.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,555 copying build/lib/freesurfer/fs_run_from_mcr.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,558 copying build/lib/freesurfer/mri_fdr.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,560 copying build/lib/freesurfer/mris_congeal.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,563 copying build/lib/freesurfer/mri_binarize.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,566 copying build/lib/freesurfer/seg2recon.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,568 copying build/lib/freesurfer/mris_mef_surfaces.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,571 copying build/lib/freesurfer/mri_stats2seg.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,573 copying build/lib/freesurfer/unpackimadir2.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,576 copying build/lib/freesurfer/mri_concat.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,579 copying build/lib/freesurfer/thickdiffmap.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,581 copying build/lib/freesurfer/rca_config.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,584 copying build/lib/freesurfer/mri_aparc2wmseg.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,586 copying build/lib/freesurfer/slicedelay.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,588 copying build/lib/freesurfer/fsrealpath.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,590 copying build/lib/freesurfer/long_create_orig.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,592 copying build/lib/freesurfer/mri_hausdorff_dist.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,595 copying build/lib/freesurfer/mri_paint.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,597 copying build/lib/freesurfer/dmri_stats_ac.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,599 copying build/lib/freesurfer/xsanatreg.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,601 copying build/lib/freesurfer/wm_anat_snr.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,603 copying build/lib/freesurfer/mri_gtmseg.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,606 copying build/lib/freesurfer/mri_strip_subject_info.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,608 copying build/lib/freesurfer/mri_probe_ima.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,610 copying build/lib/freesurfer/parc_atlas_jackknife_test.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,612 copying build/lib/freesurfer/rtview.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,615 copying build/lib/freesurfer/inflate_subject_new.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,616 copying build/lib/freesurfer/mri_reduce.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,618 copying build/lib/freesurfer/unpack_ima1_tcl.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,621 copying build/lib/freesurfer/sbtiv.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,623 copying build/lib/freesurfer/stattablediff.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,626 copying build/lib/freesurfer/dcmunpack.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,628 copying build/lib/freesurfer/mri_compute_distances.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,631 copying build/lib/freesurfer/mrisp_write.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,634 copying build/lib/freesurfer/mris_thickness.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,636 copying build/lib/freesurfer/tal_qc_azs.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,638 copying build/lib/freesurfer/vertexvol.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,640 copying build/lib/freesurfer/mris_remove_negative_vertices.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,643 copying build/lib/freesurfer/long_submit_jobs.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,645 copying build/lib/freesurfer/mris_convert.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,648 copying build/lib/freesurfer/reg2subject.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,650 copying build/lib/freesurfer/mri_fslmat_to_lta.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,652 copying build/lib/freesurfer/mri_refine_seg.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,655 copying build/lib/freesurfer/sphere_subject_rh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,657 copying build/lib/freesurfer/gcainit.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,658 copying build/lib/freesurfer/qatools_py.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,661 copying build/lib/freesurfer/fs_temp_file.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,663 copying build/lib/freesurfer/long_stats_tps.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,666 copying build/lib/freesurfer/pctsurfcon.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,668 copying build/lib/freesurfer/dmri_train.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,671 copying build/lib/freesurfer/groupstatsdiff.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,674 copying build/lib/freesurfer/mris_wm_volume.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,676 copying build/lib/freesurfer/diffusion_utils.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,678 copying build/lib/freesurfer/dmri_neighboring_regions.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,681 copying build/lib/freesurfer/compute_label_volumes_csh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,683 copying build/lib/freesurfer/morph_only_subject_lh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,685 copying build/lib/freesurfer/mri_remove_neck.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,687 copying build/lib/freesurfer/mris_reposition_surface.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,690 copying build/lib/freesurfer/t4imgs_4dfp.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,692 copying build/lib/freesurfer/dcmsplit.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,695 copying build/lib/freesurfer/mris_pmake.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,698 copying build/lib/freesurfer/talairach_mgh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,700 copying build/lib/freesurfer/anatomi_cuts_utils.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,702 copying build/lib/freesurfer/mris_segment.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,704 copying build/lib/freesurfer/mri_motion_correct.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,707 copying build/lib/freesurfer/mri_seg_diff.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,709 copying build/lib/freesurfer/mri_easywarp.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,712 copying build/lib/freesurfer/listsubj.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,714 copying build/lib/freesurfer/mris_extract_patches.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,716 copying build/lib/freesurfer/mri_funcvits.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,719 copying build/lib/freesurfer/mri_polv.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,721 copying build/lib/freesurfer/mris_interpolate_warp.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,723 copying build/lib/freesurfer/fs_temp_dir.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,726 copying build/lib/freesurfer/v_3dvolreg_afni.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,728 copying build/lib/freesurfer/bedpostx_mgh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,731 copying build/lib/freesurfer/mri_surfacemask.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,733 copying build/lib/freesurfer/mri_segment.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,735 copying build/lib/freesurfer/mri_compute_volume_fractions.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,738 copying build/lib/freesurfer/mris_multimodal_surface_placement.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,741 copying build/lib/freesurfer/exvivo_hemi_proc.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,744 copying build/lib/freesurfer/seg2filled.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,746 copying build/lib/freesurfer/mri_extract_fcd_features.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,748 copying build/lib/freesurfer/wmsaseg.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,750 copying build/lib/freesurfer/mris_copy_header.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,752 copying build/lib/freesurfer/stem2fname.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,754 copying build/lib/freesurfer/mri_vol2surf.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,756 copying build/lib/freesurfer/mri_sbbr.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,759 copying build/lib/freesurfer/mris_distance_transform.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,761 copying build/lib/freesurfer/mri_label_volume.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,764 copying build/lib/freesurfer/mris_divide_parcellation.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,766 copying build/lib/freesurfer/getfullpath.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,768 copying build/lib/freesurfer/mkxsubjreg.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,771 copying build/lib/freesurfer/xhemi_tal.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,772 copying build/lib/freesurfer/mri_edit_segmentation_with_surfaces.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,775 copying build/lib/freesurfer/make_segvol_table.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,777 copying build/lib/freesurfer/mri_diff.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,780 copying build/lib/freesurfer/register_subject_flash.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,782 copying build/lib/freesurfer/inflate_subject_lh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,785 copying build/lib/freesurfer/apply_morph.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,787 copying build/lib/freesurfer/mris_volmask.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,790 copying build/lib/freesurfer/inflate_subject.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,792 copying build/lib/freesurfer/mris_surf2vtk.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,794 copying build/lib/freesurfer/segment_thalamic_nuclei.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,797 copying build/lib/freesurfer/test_orientation_planes_from_parcellation.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,799 copying build/lib/freesurfer/mris_make_surfaces.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,802 copying build/lib/freesurfer/mris_init_global_tractography.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,805 copying build/lib/freesurfer/mri_surf2vol.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,807 copying build/lib/freesurfer/make_hemi_mask.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,810 copying build/lib/freesurfer/mri_add_new_tp.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,812 copying build/lib/freesurfer/dmri_violin_plots.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,814 copying build/lib/freesurfer/dmri_forrest.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,817 copying build/lib/freesurfer/deface_subject.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,819 copying build/lib/freesurfer/fs_time.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,821 copying build/lib/freesurfer/mris_compute_overlap.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,824 copying build/lib/freesurfer/mri_brainvol_stats.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,826 copying build/lib/freesurfer/make_average_surface.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,828 copying build/lib/freesurfer/isolate_labels_csh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,830 copying build/lib/freesurfer/tridec.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,832 copying build/lib/freesurfer/mri_transform.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,835 copying build/lib/freesurfer/run_samseg_long.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,837 copying build/lib/freesurfer/mni152reg.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,839 copying build/lib/freesurfer/vsm_smooth.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,842 copying build/lib/freesurfer/browse_minc_header_tcl.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,844 copying build/lib/freesurfer/dmri_group.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,846 copying build/lib/freesurfer/dmri_mergepaths.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,848 copying build/lib/freesurfer/mri_segstats.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,851 copying build/lib/freesurfer/mri_create_tests.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,854 copying build/lib/freesurfer/dmri_anatomi_cuts.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,856 copying build/lib/freesurfer/mris_extract_values.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,858 copying build/lib/freesurfer/mri_create_t2combined.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,861 copying build/lib/freesurfer/mris_label_area.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,863 copying build/lib/freesurfer/mri_motion_correct2.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,865 copying build/lib/freesurfer/check_recons_sh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,867 copying build/lib/freesurfer/mri_relabel_hypointensities.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,870 copying build/lib/freesurfer/mri_copy_params.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,872 copying build/lib/freesurfer/segment_subject_notal2.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,874 copying build/lib/freesurfer/morph_subject_lh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,876 copying build/lib/freesurfer/flirt_newdefault_20080811_sch.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,878 copying build/lib/freesurfer/asegstatsdiff.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,880 copying build/lib/freesurfer/morph_rgb_rh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,882 copying build/lib/freesurfer/spline3_test.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,885 copying build/lib/freesurfer/mri_compute_change_map.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,887 copying build/lib/freesurfer/reregister_subject_mixed.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,889 copying build/lib/freesurfer/mri_glmfit_sim.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,892 copying build/lib/freesurfer/mris_rotate.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,894 copying build/lib/freesurfer/ants_n4_bias_field_correction_fs.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,897 copying build/lib/freesurfer/mri_glmfit.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,900 copying build/lib/freesurfer/create_morph.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,902 copying build/lib/freesurfer/ico_supersample.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,904 copying build/lib/freesurfer/mri_extract.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,906 copying build/lib/freesurfer/fs_check_version.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,908 copying build/lib/freesurfer/mri_ca_label.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,911 copying build/lib/freesurfer/mris_parcellate_connectivity.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,913 copying build/lib/freesurfer/mksubjdirs.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,915 copying build/lib/freesurfer/make_average_volume.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,917 copying build/lib/freesurfer/mris_target_pos.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,920 copying build/lib/freesurfer/segment_ha_t1_sh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,922 copying build/lib/freesurfer/mri_or.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,924 copying build/lib/freesurfer/mri_entowm_seg.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,926 copying build/lib/freesurfer/mri_probedicom.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,928 copying build/lib/freesurfer/dmri_match.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,931 copying build/lib/freesurfer/mri_fuse_intensity_images.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,933 copying build/lib/freesurfer/regdat2xfm.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,935 copying build/lib/freesurfer/mri_surf2volseg.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,938 copying build/lib/freesurfer/mris_transform.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,940 copying build/lib/freesurfer/mri_path2label.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,942 copying build/lib/freesurfer/map_all_labels.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,944 copying build/lib/freesurfer/mri_gradient_info.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,946 copying build/lib/freesurfer/mris_annot_to_segmentation.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,948 copying build/lib/freesurfer/mri_rigid_register.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,951 copying build/lib/freesurfer/quantify_thalamic_nuclei_sh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,953 copying build/lib/freesurfer/isnifti.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,955 copying build/lib/freesurfer/freeview.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,956 copying build/lib/freesurfer/feat2segstats.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,959 copying build/lib/freesurfer/list_otl_labels.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,961 copying build/lib/freesurfer/print_unique_labels_csh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,963 copying build/lib/freesurfer/mri_edit_segmentation.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,965 copying build/lib/freesurfer/mris_simulate_atrophy.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,967 copying build/lib/freesurfer/segment_subject.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,969 copying build/lib/freesurfer/wmedits2surf.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,971 copying build/lib/freesurfer/mri_topologycorrection.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,973 copying build/lib/freesurfer/mris_surface_to_vol_distances.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,976 copying build/lib/freesurfer/make_average_subject.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,978 copying build/lib/freesurfer/dmri_colored_fa.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,980 copying build/lib/freesurfer/fix_subject.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,982 copying build/lib/freesurfer/rcbf_prep.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,984 copying build/lib/freesurfer/mri_dct_align.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,986 copying build/lib/freesurfer/mri_mask.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,988 copying build/lib/freesurfer/unpacksdcmdir.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,990 copying build/lib/freesurfer/gca_apply.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,992 copying build/lib/freesurfer/tkregister2.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,995 copying build/lib/freesurfer/mri_mcsim.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,997 copying build/lib/freesurfer/tksurfer.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:06,999 copying build/lib/freesurfer/dmri_bset.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,001 copying build/lib/freesurfer/mris_thickness_comparison.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,003 copying build/lib/freesurfer/mri_normalize_tp2.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,005 copying build/lib/freesurfer/mri_strip_nonwhite.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,007 copying build/lib/freesurfer/mri_ribbon.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,010 copying build/lib/freesurfer/mri_cc.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,012 copying build/lib/freesurfer/dmri_group_by_endpoints.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,014 copying build/lib/freesurfer/fsl_label2voxel.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,016 copying build/lib/freesurfer/mris_rf_label.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,018 copying build/lib/freesurfer/talairach_avi.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,020 copying build/lib/freesurfer/optseq2.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,023 copying build/lib/freesurfer/mris_curvature2image.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,025 copying build/lib/freesurfer/dmri_paths.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,028 copying build/lib/freesurfer/vno_match_check.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,030 copying build/lib/freesurfer/merge_stats_tables.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,032 copying build/lib/freesurfer/mri_correct_segmentations.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,034 copying build/lib/freesurfer/mris_distance_to_label.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,037 copying build/lib/freesurfer/fsvglrun.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,039 copying build/lib/freesurfer/make_cortex_label.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,041 copying build/lib/freesurfer/mris_left_right_register.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,043 copying build/lib/freesurfer/mri_stopmask.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,045 copying build/lib/freesurfer/groupstats.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,048 copying build/lib/freesurfer/trac_paths.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,050 copying build/lib/freesurfer/renormalize_t1_subject.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,052 copying build/lib/freesurfer/samseg.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,055 copying build/lib/freesurfer/ms_refine_subject.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,056 copying build/lib/freesurfer/mris_image2vtk.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,058 copying build/lib/freesurfer/mris_sample_label.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,061 copying build/lib/freesurfer/minc2seqinfo.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,063 copying build/lib/freesurfer/mri_distance_transform.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,065 copying build/lib/freesurfer/mris_ms_refine.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,067 copying build/lib/freesurfer/mri_fieldsign.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,069 copying build/lib/freesurfer/rbbr.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,072 copying build/lib/freesurfer/mri_segcentroids.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,074 copying build/lib/freesurfer/mris_watershed.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,076 copying build/lib/freesurfer/mri_compile_edits.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,078 copying build/lib/freesurfer/fs_print_help.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,080 copying build/lib/freesurfer/labels_intersect.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,083 copying build/lib/freesurfer/dmri_vox2vox.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,085 copying build/lib/freesurfer/mri_annotation2label.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,088 copying build/lib/freesurfer/fvcompare.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,090 copying build/lib/freesurfer/hiam_register.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,093 copying build/lib/freesurfer/mris_expand.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,095 copying build/lib/freesurfer/mri_segreg.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,097 copying build/lib/freesurfer/defect2seg.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,100 copying build/lib/freesurfer/reconbatchjobs.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,102 copying build/lib/freesurfer/mri_label2vol.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,104 copying build/lib/freesurfer/fscalc.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,107 copying build/lib/freesurfer/mris_fill.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,109 copying build/lib/freesurfer/tkmeditfv.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,112 copying build/lib/freesurfer/fsdcmdecompress.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,114 copying build/lib/freesurfer/mri_warp_convert.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,116 copying build/lib/freesurfer/label2flat.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,119 copying build/lib/freesurfer/gauss_4dfp.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,121 copying build/lib/freesurfer/fspalm.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,123 copying build/lib/freesurfer/mri_cvs_register.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,126 copying build/lib/freesurfer/mri_fwhm.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,128 copying build/lib/freesurfer/mris_label_mode.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,131 copying build/lib/freesurfer/mri_copy_values.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,133 copying build/lib/freesurfer/mri_exvivo_norm.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,135 copying build/lib/freesurfer/register_child.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,137 copying build/lib/freesurfer/ventfix.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,139 copying build/lib/freesurfer/samsegmesh2surf.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,141 copying build/lib/freesurfer/gtmseg.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,144 copying build/lib/freesurfer/oct_register_mosaic.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,146 copying build/lib/freesurfer/mri_seghead.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,148 copying build/lib/freesurfer/t4img_4dfp.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,151 copying build/lib/freesurfer/test_recon_all_csh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,153 copying build/lib/freesurfer/mri_wbc.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,156 copying build/lib/freesurfer/dicom_rename.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,158 copying build/lib/freesurfer/mri_edit_wm_with_aseg.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,160 copying build/lib/freesurfer/mris_distance_map.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,163 copying build/lib/freesurfer/mri_dct_align_binary.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,165 copying build/lib/freesurfer/run_mris_preproc.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,167 copying build/lib/freesurfer/mri_morphology.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,169 copying build/lib/freesurfer/mri_apply_bias.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,172 copying build/lib/freesurfer/aparcstats2table.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,174 copying build/lib/freesurfer/dcmdrle_fs.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,177 copying build/lib/freesurfer/morph_subject.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,179 copying build/lib/freesurfer/mris_jacobian.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,181 copying build/lib/freesurfer/make_upright.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,183 copying build/lib/freesurfer/fsr_getxopts.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,185 copying build/lib/freesurfer/apas2aseg.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,188 copying build/lib/freesurfer/mri_nlfilter.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,190 copying build/lib/freesurfer/mri_aparc2aseg.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,193 copying build/lib/freesurfer/mri_jacobian.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,195 copying build/lib/freesurfer/mri_volsynth.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,198 copying build/lib/freesurfer/long_stats_slopes.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,200 copying build/lib/freesurfer/mris_rf_train.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,202 copying build/lib/freesurfer/segment_thalamic_nuclei_sh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,205 copying build/lib/freesurfer/segpons.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,207 copying build/lib/freesurfer/brec.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,209 copying build/lib/freesurfer/spmregister.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,211 copying build/lib/freesurfer/mris_curvature_stats.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,213 copying build/lib/freesurfer/mris_compute_parc_overlap.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,216 copying build/lib/freesurfer/reinflate_subject_lh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,218 copying build/lib/freesurfer/__init__.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,221 copying build/lib/freesurfer/mris_annot_diff.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,223 copying build/lib/freesurfer/xcerebralseg.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,225 copying build/lib/freesurfer/mris_euler_number.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,228 copying build/lib/freesurfer/segment_subject_old_skull_strip.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,230 copying build/lib/freesurfer/mris_average_curvature.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,232 copying build/lib/freesurfer/train_gcs_atlas.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,235 copying build/lib/freesurfer/unpackmincdir.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,237 copying build/lib/freesurfer/mris_volsmooth.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,239 copying build/lib/freesurfer/fixup_mni_paths.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,241 copying build/lib/freesurfer/rca_config2csh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,244 copying build/lib/freesurfer/mri_em_register.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,248 copying build/lib/freesurfer/setlabelstat.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,251 copying build/lib/freesurfer/fix_subject_corrected.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,254 copying build/lib/freesurfer/xhemireg.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,257 copying build/lib/freesurfer/rca_base_init.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,260 copying build/lib/freesurfer/mri_fit_bias.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,263 copying build/lib/freesurfer/mri_reorient_lr_csh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,265 copying build/lib/freesurfer/mri_segment_thalamic_nuclei_dti_cnn.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,268 copying build/lib/freesurfer/mri_linear_align_binary.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,271 copying build/lib/freesurfer/trk_tools.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,274 copying build/lib/freesurfer/mri_label2label.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,278 copying build/lib/freesurfer/mris_sample_parc.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,281 copying build/lib/freesurfer/csvprint.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,284 copying build/lib/freesurfer/renormalize_subject_keep_editting.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,287 copying build/lib/freesurfer/mri_cvs_check.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,290 copying build/lib/freesurfer/extract_seg_waveform.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,293 copying build/lib/freesurfer/run_segment_subject_t2_auto_estimate_alveus_ml_sh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,296 copying build/lib/freesurfer/long_stats_combine.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,299 copying build/lib/freesurfer/aparc2feat.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,302 copying build/lib/freesurfer/gcatrainskull.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,304 copying build/lib/freesurfer/reg_mni305_2mm.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,307 copying build/lib/freesurfer/pointset2label.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,310 copying build/lib/freesurfer/fix_subject_rh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,313 copying build/lib/freesurfer/irepifitvol.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,315 copying build/lib/freesurfer/mri_tessellate.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,318 copying build/lib/freesurfer/mris_entropy.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,321 copying build/lib/freesurfer/long_mris_slopes.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,324 copying build/lib/freesurfer/mris_hausdorff_dist.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,327 copying build/lib/freesurfer/polyorder.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,330 copying build/lib/freesurfer/run_samseg.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,333 copying build/lib/freesurfer/mris2rgb.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,336 copying build/lib/freesurfer/mri_nl_align_binary.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,339 copying build/lib/freesurfer/morph_rgb_lh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,341 copying build/lib/freesurfer/isanalyze.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,344 copying build/lib/freesurfer/mri_rf_long_label.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,346 copying build/lib/freesurfer/mris_extract_main_component.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,348 copying build/lib/freesurfer/mri_ca_normalize.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,351 copying build/lib/freesurfer/gcatrain.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,353 copying build/lib/freesurfer/mri_average.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,356 copying build/lib/freesurfer/fix_subject_corrected_rh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,358 copying build/lib/freesurfer/mris_register_label_map.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,360 copying build/lib/freesurfer/dmri_project_end_points.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,363 copying build/lib/freesurfer/mris_gradient.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,365 copying build/lib/freesurfer/mris_ca_train.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,368 copying build/lib/freesurfer/mris_spherical_average.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,370 copying build/lib/freesurfer/stat_normalize.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,373 copying build/lib/freesurfer/mris_intensity_profile.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,375 copying build/lib/freesurfer/dcmdjpeg_fs.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,378 copying build/lib/freesurfer/surf2vol.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,381 copying build/lib/freesurfer/morph_only_subject.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,383 copying build/lib/freesurfer/mri_rf_label.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,386 copying build/lib/freesurfer/dmri_extract_surface_measurements.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,389 copying build/lib/freesurfer/reinflate_subject.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,391 copying build/lib/freesurfer/segment_subregions.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,393 copying build/lib/freesurfer/fiducials_correction.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,395 copying build/lib/freesurfer/check_subject.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,397 copying build/lib/freesurfer/segment_subject_t1_t2_auto_estimate_alveus_ml.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,399 copying build/lib/freesurfer/mri_synthsr.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,402 copying build/lib/freesurfer/mris_segmentation_stats.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,404 copying build/lib/freesurfer/v_4dfptoanalyze.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,406 copying build/lib/freesurfer/mri_synthmorph.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,409 copying build/lib/freesurfer/mri_mark_temporal_lobe.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,411 copying build/lib/freesurfer/is_lta.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,413 copying build/lib/freesurfer/map_to_base.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,415 copying build/lib/freesurfer/mris_anatomical_stats.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,418 copying build/lib/freesurfer/mris_ca_label.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,420 copying build/lib/freesurfer/mri_xvolavg.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,423 copying build/lib/freesurfer/mri_mergelabels.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,425 copying build/lib/freesurfer/mris_add_template.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,427 copying build/lib/freesurfer/bbmask.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,429 copying build/lib/freesurfer/mergeseg.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,431 copying build/lib/freesurfer/mris_warp.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,434 copying build/lib/freesurfer/quantify_h_asubregions_sh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,436 copying build/lib/freesurfer/dcmdir_info_mgh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,438 copying build/lib/freesurfer/mris_preproc.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,441 copying build/lib/freesurfer/get_label_thickness.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,443 copying build/lib/freesurfer/segment_subject_sc.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,445 copying build/lib/freesurfer/dmri_ac_sh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,447 copying build/lib/freesurfer/cblumwmgyri.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,450 copying build/lib/freesurfer/fs_spmreg_glnxa64.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,452 copying build/lib/freesurfer/mris_ca_deform.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,454 copying build/lib/freesurfer/mris_flatten.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,457 copying build/lib/freesurfer/sratio.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,459 copying build/lib/freesurfer/mri_3d_photo_recon.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,462 copying build/lib/freesurfer/mris_refine_surfaces.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,464 copying build/lib/freesurfer/mri_compute_layer_fractions.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,466 copying build/lib/freesurfer/histo_synthesize.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,468 copying build/lib/freesurfer/segment_ha_t1_long_sh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,471 copying build/lib/freesurfer/mri_surfcluster.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,474 copying build/lib/freesurfer/cor_to_minc.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,476 copying build/lib/freesurfer/mri_dist_surf_label.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,478 copying build/lib/freesurfer/check_mcr_sh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,480 copying build/lib/freesurfer/mri_pretess.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,482 copying build/lib/freesurfer/mri_rf_long_train.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,484 copying build/lib/freesurfer/ants_denoise_image_fs.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,486 copying build/lib/freesurfer/mri_compute_volume_intensities.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,489 copying build/lib/freesurfer/mris_apply_reg.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,491 copying build/lib/freesurfer/mri_relabel_nonwm_hypos.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,494 copying build/lib/freesurfer/run_segment_subject_t1_auto_estimate_alveus_ml_sh.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,496 copying build/lib/freesurfer/recon_all.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,499 copying build/lib/freesurfer/mris_autodet_gwstats.py -> build/bdist.linux-armv7l/wheel/./freesurfer 2026-06-06T23:53:07,502 running install_egg_info 2026-06-06T23:53:07,507 Copying niwrap_freesurfer.egg-info to build/bdist.linux-armv7l/wheel/./niwrap_freesurfer-1.0.1-py3.11.egg-info 2026-06-06T23:53:07,517 running install_scripts 2026-06-06T23:53:07,524 creating build/bdist.linux-armv7l/wheel/niwrap_freesurfer-1.0.1.dist-info/WHEEL 2026-06-06T23:53:07,527 creating '/tmp/pip-wheel-37601p5h/.tmp-6u92yyyi/niwrap_freesurfer-1.0.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-06-06T23:53:07,548 adding 'freesurfer/__init__.py' 2026-06-06T23:53:07,550 adding 'freesurfer/analyzeto4dfp.py' 2026-06-06T23:53:07,552 adding 'freesurfer/anatomi_cuts_utils.py' 2026-06-06T23:53:07,554 adding 'freesurfer/annot2std.py' 2026-06-06T23:53:07,556 adding 'freesurfer/ants_denoise_image_fs.py' 2026-06-06T23:53:07,558 adding 'freesurfer/ants_n4_bias_field_correction_fs.py' 2026-06-06T23:53:07,560 adding 'freesurfer/aparc2feat.py' 2026-06-06T23:53:07,562 adding 'freesurfer/aparc_stats_aseg.py' 2026-06-06T23:53:07,564 adding 'freesurfer/aparcstats2table.py' 2026-06-06T23:53:07,566 adding 'freesurfer/aparcstatsdiff.py' 2026-06-06T23:53:07,568 adding 'freesurfer/apas2aseg.py' 2026-06-06T23:53:07,570 adding 'freesurfer/apply_morph.py' 2026-06-06T23:53:07,572 adding 'freesurfer/aseg2feat.py' 2026-06-06T23:53:07,574 adding 'freesurfer/asegstats2table.py' 2026-06-06T23:53:07,576 adding 'freesurfer/asegstatsdiff.py' 2026-06-06T23:53:07,577 adding 'freesurfer/avi2talxfm.py' 2026-06-06T23:53:07,579 adding 'freesurfer/bblabel.py' 2026-06-06T23:53:07,581 adding 'freesurfer/bbmask.py' 2026-06-06T23:53:07,584 adding 'freesurfer/bbregister.py' 2026-06-06T23:53:07,585 adding 'freesurfer/bedpostx_mgh.py' 2026-06-06T23:53:07,587 adding 'freesurfer/beta2sxa.py' 2026-06-06T23:53:07,589 adding 'freesurfer/biasfield.py' 2026-06-06T23:53:07,591 adding 'freesurfer/bmedits2surf.py' 2026-06-06T23:53:07,592 adding 'freesurfer/brec.py' 2026-06-06T23:53:07,594 adding 'freesurfer/browse_minc_header_tcl.py' 2026-06-06T23:53:07,595 adding 'freesurfer/bugr.py' 2026-06-06T23:53:07,597 adding 'freesurfer/build_desikan_killiany_gcs_csh.py' 2026-06-06T23:53:07,598 adding 'freesurfer/cblumwmgyri.py' 2026-06-06T23:53:07,600 adding 'freesurfer/check_mcr_sh.py' 2026-06-06T23:53:07,601 adding 'freesurfer/check_recons_sh.py' 2026-06-06T23:53:07,603 adding 'freesurfer/check_subject.py' 2026-06-06T23:53:07,604 adding 'freesurfer/compute_interrater_variability_csh.py' 2026-06-06T23:53:07,606 adding 'freesurfer/compute_label_volumes_csh.py' 2026-06-06T23:53:07,607 adding 'freesurfer/compute_vox2vox.py' 2026-06-06T23:53:07,609 adding 'freesurfer/conf2hires.py' 2026-06-06T23:53:07,611 adding 'freesurfer/connected_components.py' 2026-06-06T23:53:07,612 adding 'freesurfer/cor_to_minc.py' 2026-06-06T23:53:07,614 adding 'freesurfer/cp_dicom.py' 2026-06-06T23:53:07,616 adding 'freesurfer/create_morph.py' 2026-06-06T23:53:07,617 adding 'freesurfer/csvprint.py' 2026-06-06T23:53:07,619 adding 'freesurfer/dcmdir_info_mgh.py' 2026-06-06T23:53:07,621 adding 'freesurfer/dcmdjpeg_fs.py' 2026-06-06T23:53:07,624 adding 'freesurfer/dcmdrle_fs.py' 2026-06-06T23:53:07,626 adding 'freesurfer/dcmsplit.py' 2026-06-06T23:53:07,628 adding 'freesurfer/dcmunpack.py' 2026-06-06T23:53:07,630 adding 'freesurfer/deface_subject.py' 2026-06-06T23:53:07,632 adding 'freesurfer/defect2seg.py' 2026-06-06T23:53:07,634 adding 'freesurfer/defect_seg.py' 2026-06-06T23:53:07,635 adding 'freesurfer/dicom_rename.py' 2026-06-06T23:53:07,637 adding 'freesurfer/diffusion_utils.py' 2026-06-06T23:53:07,638 adding 'freesurfer/dmri_ac_sh.py' 2026-06-06T23:53:07,640 adding 'freesurfer/dmri_anatomi_cuts.py' 2026-06-06T23:53:07,642 adding 'freesurfer/dmri_bset.py' 2026-06-06T23:53:07,643 adding 'freesurfer/dmri_colored_fa.py' 2026-06-06T23:53:07,645 adding 'freesurfer/dmri_extract_surface_measurements.py' 2026-06-06T23:53:07,646 adding 'freesurfer/dmri_forrest.py' 2026-06-06T23:53:07,648 adding 'freesurfer/dmri_group.py' 2026-06-06T23:53:07,650 adding 'freesurfer/dmri_group_by_endpoints.py' 2026-06-06T23:53:07,651 adding 'freesurfer/dmri_match.py' 2026-06-06T23:53:07,653 adding 'freesurfer/dmri_mergepaths.py' 2026-06-06T23:53:07,655 adding 'freesurfer/dmri_motion.py' 2026-06-06T23:53:07,656 adding 'freesurfer/dmri_neighboring_regions.py' 2026-06-06T23:53:07,659 adding 'freesurfer/dmri_paths.py' 2026-06-06T23:53:07,661 adding 'freesurfer/dmri_pathstats.py' 2026-06-06T23:53:07,663 adding 'freesurfer/dmri_project_end_points.py' 2026-06-06T23:53:07,664 adding 'freesurfer/dmri_save_histograms.py' 2026-06-06T23:53:07,666 adding 'freesurfer/dmri_spline.py' 2026-06-06T23:53:07,668 adding 'freesurfer/dmri_stats_ac.py' 2026-06-06T23:53:07,670 adding 'freesurfer/dmri_train.py' 2026-06-06T23:53:07,673 adding 'freesurfer/dmri_trk2trk.py' 2026-06-06T23:53:07,674 adding 'freesurfer/dmri_violin_plots.py' 2026-06-06T23:53:07,676 adding 'freesurfer/dmri_vox2vox.py' 2026-06-06T23:53:07,678 adding 'freesurfer/dt_recon.py' 2026-06-06T23:53:07,680 adding 'freesurfer/export_gcam.py' 2026-06-06T23:53:07,682 adding 'freesurfer/extract_seg_waveform.py' 2026-06-06T23:53:07,684 adding 'freesurfer/exvivo_hemi_proc.py' 2026-06-06T23:53:07,686 adding 'freesurfer/feat2segstats.py' 2026-06-06T23:53:07,688 adding 'freesurfer/feat2surf.py' 2026-06-06T23:53:07,689 adding 'freesurfer/fiducials_calibration.py' 2026-06-06T23:53:07,690 adding 'freesurfer/fiducials_correction.py' 2026-06-06T23:53:07,692 adding 'freesurfer/fix_subject.py' 2026-06-06T23:53:07,693 adding 'freesurfer/fix_subject_corrected.py' 2026-06-06T23:53:07,695 adding 'freesurfer/fix_subject_corrected_rh.py' 2026-06-06T23:53:07,696 adding 'freesurfer/fix_subject_rh.py' 2026-06-06T23:53:07,698 adding 'freesurfer/fixup_mni_paths.py' 2026-06-06T23:53:07,700 adding 'freesurfer/flip_4dfp.py' 2026-06-06T23:53:07,701 adding 'freesurfer/flirt_newdefault_20080811_sch.py' 2026-06-06T23:53:07,703 adding 'freesurfer/fname2ext.py' 2026-06-06T23:53:07,704 adding 'freesurfer/fname2stem.py' 2026-06-06T23:53:07,705 adding 'freesurfer/freeview.py' 2026-06-06T23:53:07,707 adding 'freesurfer/fs_check_version.py' 2026-06-06T23:53:07,708 adding 'freesurfer/fs_install_mcr.py' 2026-06-06T23:53:07,710 adding 'freesurfer/fs_lib_check.py' 2026-06-06T23:53:07,711 adding 'freesurfer/fs_print_help.py' 2026-06-06T23:53:07,712 adding 'freesurfer/fs_run_from_mcr.py' 2026-06-06T23:53:07,714 adding 'freesurfer/fs_spmreg_glnxa64.py' 2026-06-06T23:53:07,715 adding 'freesurfer/fs_temp_dir.py' 2026-06-06T23:53:07,716 adding 'freesurfer/fs_temp_file.py' 2026-06-06T23:53:07,718 adding 'freesurfer/fs_time.py' 2026-06-06T23:53:07,719 adding 'freesurfer/fs_tutorial_data.py' 2026-06-06T23:53:07,721 adding 'freesurfer/fs_update.py' 2026-06-06T23:53:07,722 adding 'freesurfer/fscalc.py' 2026-06-06T23:53:07,724 adding 'freesurfer/fsdcmdecompress.py' 2026-06-06T23:53:07,725 adding 'freesurfer/fsl_5_0_2_xyztrans_sch.py' 2026-06-06T23:53:07,727 adding 'freesurfer/fsl_label2voxel.py' 2026-06-06T23:53:07,729 adding 'freesurfer/fsl_rigid_register.py' 2026-06-06T23:53:07,731 adding 'freesurfer/fsl_sub_mgh.py' 2026-06-06T23:53:07,733 adding 'freesurfer/fslregister.py' 2026-06-06T23:53:07,735 adding 'freesurfer/fspalm.py' 2026-06-06T23:53:07,737 adding 'freesurfer/fsr_coreg.py' 2026-06-06T23:53:07,738 adding 'freesurfer/fsr_getxopts.py' 2026-06-06T23:53:07,740 adding 'freesurfer/fsr_import.py' 2026-06-06T23:53:07,741 adding 'freesurfer/fsrealpath.py' 2026-06-06T23:53:07,743 adding 'freesurfer/fsvglrun.py' 2026-06-06T23:53:07,745 adding 'freesurfer/fvcompare.py' 2026-06-06T23:53:07,747 adding 'freesurfer/gauss_4dfp.py' 2026-06-06T23:53:07,749 adding 'freesurfer/gca_apply.py' 2026-06-06T23:53:07,750 adding 'freesurfer/gcainit.py' 2026-06-06T23:53:07,752 adding 'freesurfer/gcaprepone.py' 2026-06-06T23:53:07,754 adding 'freesurfer/gcatrain.py' 2026-06-06T23:53:07,755 adding 'freesurfer/gcatrainskull.py' 2026-06-06T23:53:07,758 adding 'freesurfer/gdcmconv_fs.py' 2026-06-06T23:53:07,760 adding 'freesurfer/gems_compute_atlas_probs.py' 2026-06-06T23:53:07,761 adding 'freesurfer/get_label_thickness.py' 2026-06-06T23:53:07,763 adding 'freesurfer/getfullpath.py' 2026-06-06T23:53:07,764 adding 'freesurfer/grad_unwarp.py' 2026-06-06T23:53:07,766 adding 'freesurfer/groupstats.py' 2026-06-06T23:53:07,768 adding 'freesurfer/groupstatsdiff.py' 2026-06-06T23:53:07,771 adding 'freesurfer/gtmseg.py' 2026-06-06T23:53:07,772 adding 'freesurfer/hiam_make_surfaces.py' 2026-06-06T23:53:07,774 adding 'freesurfer/hiam_make_template.py' 2026-06-06T23:53:07,775 adding 'freesurfer/hiam_register.py' 2026-06-06T23:53:07,777 adding 'freesurfer/histo_compute_joint_density.py' 2026-06-06T23:53:07,779 adding 'freesurfer/histo_register_block.py' 2026-06-06T23:53:07,781 adding 'freesurfer/histo_synthesize.py' 2026-06-06T23:53:07,782 adding 'freesurfer/ico_supersample.py' 2026-06-06T23:53:07,784 adding 'freesurfer/ifh2hdr.py' 2026-06-06T23:53:07,785 adding 'freesurfer/imgreg_4dfp.py' 2026-06-06T23:53:07,787 adding 'freesurfer/inflate_subject.py' 2026-06-06T23:53:07,788 adding 'freesurfer/inflate_subject3.py' 2026-06-06T23:53:07,790 adding 'freesurfer/inflate_subject_lh.py' 2026-06-06T23:53:07,791 adding 'freesurfer/inflate_subject_new.py' 2026-06-06T23:53:07,793 adding 'freesurfer/inflate_subject_new_lh.py' 2026-06-06T23:53:07,794 adding 'freesurfer/inflate_subject_new_rh.py' 2026-06-06T23:53:07,795 adding 'freesurfer/inflate_subject_rh.py' 2026-06-06T23:53:07,797 adding 'freesurfer/inflate_subject_sc.py' 2026-06-06T23:53:07,798 adding 'freesurfer/irepifitvol.py' 2026-06-06T23:53:07,800 adding 'freesurfer/irepifitvol_glnx64.py' 2026-06-06T23:53:07,801 adding 'freesurfer/is_lta.py' 2026-06-06T23:53:07,803 adding 'freesurfer/is_surface.py' 2026-06-06T23:53:07,804 adding 'freesurfer/isanalyze.py' 2026-06-06T23:53:07,806 adding 'freesurfer/isnifti.py' 2026-06-06T23:53:07,807 adding 'freesurfer/isolate_labels_csh.py' 2026-06-06T23:53:07,809 adding 'freesurfer/isolate_labels_keeporigval_csh.py' 2026-06-06T23:53:07,810 adding 'freesurfer/jkgcatrain.py' 2026-06-06T23:53:07,812 adding 'freesurfer/label2flat.py' 2026-06-06T23:53:07,814 adding 'freesurfer/label2patch.py' 2026-06-06T23:53:07,815 adding 'freesurfer/label_elderly_subject.py' 2026-06-06T23:53:07,817 adding 'freesurfer/label_subject.py' 2026-06-06T23:53:07,819 adding 'freesurfer/label_subject_flash.py' 2026-06-06T23:53:07,821 adding 'freesurfer/label_subject_mixed.py' 2026-06-06T23:53:07,822 adding 'freesurfer/labels_disjoint.py' 2026-06-06T23:53:07,824 adding 'freesurfer/labels_intersect.py' 2026-06-06T23:53:07,825 adding 'freesurfer/labels_union.py' 2026-06-06T23:53:07,827 adding 'freesurfer/list_otl_labels.py' 2026-06-06T23:53:07,828 adding 'freesurfer/listsubj.py' 2026-06-06T23:53:07,830 adding 'freesurfer/long_create_base_sigma.py' 2026-06-06T23:53:07,831 adding 'freesurfer/long_create_orig.py' 2026-06-06T23:53:07,834 adding 'freesurfer/long_mris_slopes.py' 2026-06-06T23:53:07,835 adding 'freesurfer/long_qdec_table.py' 2026-06-06T23:53:07,837 adding 'freesurfer/long_stats_combine.py' 2026-06-06T23:53:07,840 adding 'freesurfer/long_stats_slopes.py' 2026-06-06T23:53:07,841 adding 'freesurfer/long_stats_tps.py' 2026-06-06T23:53:07,843 adding 'freesurfer/long_submit_jobs.py' 2026-06-06T23:53:07,845 adding 'freesurfer/long_submit_postproc.py' 2026-06-06T23:53:07,847 adding 'freesurfer/longmc.py' 2026-06-06T23:53:07,848 adding 'freesurfer/lpcregister.py' 2026-06-06T23:53:07,850 adding 'freesurfer/lta_convert.py' 2026-06-06T23:53:07,852 adding 'freesurfer/lta_diff.py' 2026-06-06T23:53:07,854 adding 'freesurfer/make_average_subcort.py' 2026-06-06T23:53:07,856 adding 'freesurfer/make_average_subject.py' 2026-06-06T23:53:07,859 adding 'freesurfer/make_average_surface.py' 2026-06-06T23:53:07,861 adding 'freesurfer/make_average_volume.py' 2026-06-06T23:53:07,863 adding 'freesurfer/make_cortex_label.py' 2026-06-06T23:53:07,864 adding 'freesurfer/make_exvivo_filled.py' 2026-06-06T23:53:07,867 adding 'freesurfer/make_folding_atlas.py' 2026-06-06T23:53:07,868 adding 'freesurfer/make_hemi_mask.py' 2026-06-06T23:53:07,870 adding 'freesurfer/make_segvol_table.py' 2026-06-06T23:53:07,872 adding 'freesurfer/make_symmetric.py' 2026-06-06T23:53:07,873 adding 'freesurfer/make_upright.py' 2026-06-06T23:53:07,875 adding 'freesurfer/makevol.py' 2026-06-06T23:53:07,876 adding 'freesurfer/map_all_labels.py' 2026-06-06T23:53:07,878 adding 'freesurfer/map_all_labels_lh.py' 2026-06-06T23:53:07,880 adding 'freesurfer/map_central_sulcus.py' 2026-06-06T23:53:07,882 adding 'freesurfer/map_to_base.py' 2026-06-06T23:53:07,883 adding 'freesurfer/meanval.py' 2026-06-06T23:53:07,885 adding 'freesurfer/merge_stats_tables.py' 2026-06-06T23:53:07,887 adding 'freesurfer/mergeseg.py' 2026-06-06T23:53:07,890 adding 'freesurfer/mideface.py' 2026-06-06T23:53:07,891 adding 'freesurfer/minc2seqinfo.py' 2026-06-06T23:53:07,893 adding 'freesurfer/mkheadsurf.py' 2026-06-06T23:53:07,895 adding 'freesurfer/mkima_index_tcl.py' 2026-06-06T23:53:07,897 adding 'freesurfer/mkmnc_index_tcl.py' 2026-06-06T23:53:07,898 adding 'freesurfer/mksubjdirs.py' 2026-06-06T23:53:07,900 adding 'freesurfer/mksurfatlas.py' 2026-06-06T23:53:07,901 adding 'freesurfer/mkxsubjreg.py' 2026-06-06T23:53:07,903 adding 'freesurfer/mmppsp.py' 2026-06-06T23:53:07,905 adding 'freesurfer/mni152reg.py' 2026-06-06T23:53:07,906 adding 'freesurfer/morph_only_subject.py' 2026-06-06T23:53:07,908 adding 'freesurfer/morph_only_subject_lh.py' 2026-06-06T23:53:07,909 adding 'freesurfer/morph_only_subject_rh.py' 2026-06-06T23:53:07,911 adding 'freesurfer/morph_rgb_lh.py' 2026-06-06T23:53:07,912 adding 'freesurfer/morph_rgb_rh.py' 2026-06-06T23:53:07,913 adding 'freesurfer/morph_subject.py' 2026-06-06T23:53:07,915 adding 'freesurfer/morph_subject_lh.py' 2026-06-06T23:53:07,916 adding 'freesurfer/morph_subject_rh.py' 2026-06-06T23:53:07,918 adding 'freesurfer/morph_tables_lh.py' 2026-06-06T23:53:07,919 adding 'freesurfer/morph_tables_rh.py' 2026-06-06T23:53:07,921 adding 'freesurfer/mpr2mni305.py' 2026-06-06T23:53:07,922 adding 'freesurfer/mri_3d_photo_recon.py' 2026-06-06T23:53:07,924 adding 'freesurfer/mri_add_new_tp.py' 2026-06-06T23:53:07,925 adding 'freesurfer/mri_add_xform_to_header.py' 2026-06-06T23:53:07,927 adding 'freesurfer/mri_align_long_csh.py' 2026-06-06T23:53:07,928 adding 'freesurfer/mri_and.py' 2026-06-06T23:53:07,930 adding 'freesurfer/mri_annotation2label.py' 2026-06-06T23:53:07,932 adding 'freesurfer/mri_aparc2aseg.py' 2026-06-06T23:53:07,933 adding 'freesurfer/mri_aparc2wmseg.py' 2026-06-06T23:53:07,935 adding 'freesurfer/mri_apply_bias.py' 2026-06-06T23:53:07,937 adding 'freesurfer/mri_average.py' 2026-06-06T23:53:07,939 adding 'freesurfer/mri_binarize.py' 2026-06-06T23:53:07,941 adding 'freesurfer/mri_brain_volume.py' 2026-06-06T23:53:07,943 adding 'freesurfer/mri_brainvol_stats.py' 2026-06-06T23:53:07,946 adding 'freesurfer/mri_ca_label.py' 2026-06-06T23:53:07,949 adding 'freesurfer/mri_ca_normalize.py' 2026-06-06T23:53:07,952 adding 'freesurfer/mri_ca_register.py' 2026-06-06T23:53:07,954 adding 'freesurfer/mri_ca_tissue_parms.py' 2026-06-06T23:53:07,956 adding 'freesurfer/mri_ca_train.py' 2026-06-06T23:53:07,957 adding 'freesurfer/mri_cal_renormalize_gca.py' 2026-06-06T23:53:07,959 adding 'freesurfer/mri_cc.py' 2026-06-06T23:53:07,960 adding 'freesurfer/mri_cnr.py' 2026-06-06T23:53:07,962 adding 'freesurfer/mri_compile_edits.py' 2026-06-06T23:53:07,963 adding 'freesurfer/mri_compute_bias.py' 2026-06-06T23:53:07,965 adding 'freesurfer/mri_compute_change_map.py' 2026-06-06T23:53:07,966 adding 'freesurfer/mri_compute_distances.py' 2026-06-06T23:53:07,968 adding 'freesurfer/mri_compute_layer_fractions.py' 2026-06-06T23:53:07,970 adding 'freesurfer/mri_compute_overlap.py' 2026-06-06T23:53:07,972 adding 'freesurfer/mri_compute_seg_overlap.py' 2026-06-06T23:53:07,974 adding 'freesurfer/mri_compute_volume_fractions.py' 2026-06-06T23:53:07,976 adding 'freesurfer/mri_compute_volume_intensities.py' 2026-06-06T23:53:07,978 adding 'freesurfer/mri_concat.py' 2026-06-06T23:53:07,980 adding 'freesurfer/mri_concatenate_gcam.py' 2026-06-06T23:53:07,982 adding 'freesurfer/mri_concatenate_lta.py' 2026-06-06T23:53:07,984 adding 'freesurfer/mri_convert.py' 2026-06-06T23:53:07,986 adding 'freesurfer/mri_copy_params.py' 2026-06-06T23:53:07,987 adding 'freesurfer/mri_copy_values.py' 2026-06-06T23:53:07,989 adding 'freesurfer/mri_cor2label.py' 2026-06-06T23:53:07,993 adding 'freesurfer/mri_coreg.py' 2026-06-06T23:53:07,994 adding 'freesurfer/mri_correct_segmentations.py' 2026-06-06T23:53:07,996 adding 'freesurfer/mri_create_t2combined.py' 2026-06-06T23:53:07,998 adding 'freesurfer/mri_create_tests.py' 2026-06-06T23:53:08,000 adding 'freesurfer/mri_cvs_check.py' 2026-06-06T23:53:08,001 adding 'freesurfer/mri_cvs_data_copy.py' 2026-06-06T23:53:08,004 adding 'freesurfer/mri_cvs_register.py' 2026-06-06T23:53:08,005 adding 'freesurfer/mri_dct_align.py' 2026-06-06T23:53:08,007 adding 'freesurfer/mri_dct_align_binary.py' 2026-06-06T23:53:08,008 adding 'freesurfer/mri_deface.py' 2026-06-06T23:53:08,011 adding 'freesurfer/mri_defacer.py' 2026-06-06T23:53:08,013 adding 'freesurfer/mri_diff.py' 2026-06-06T23:53:08,015 adding 'freesurfer/mri_dist_surf_label.py' 2026-06-06T23:53:08,017 adding 'freesurfer/mri_distance_transform.py' 2026-06-06T23:53:08,018 adding 'freesurfer/mri_easyreg.py' 2026-06-06T23:53:08,020 adding 'freesurfer/mri_easywarp.py' 2026-06-06T23:53:08,022 adding 'freesurfer/mri_edit_segmentation.py' 2026-06-06T23:53:08,023 adding 'freesurfer/mri_edit_segmentation_with_surfaces.py' 2026-06-06T23:53:08,025 adding 'freesurfer/mri_edit_wm_with_aseg.py' 2026-06-06T23:53:08,029 adding 'freesurfer/mri_em_register.py' 2026-06-06T23:53:08,031 adding 'freesurfer/mri_entowm_seg.py' 2026-06-06T23:53:08,033 adding 'freesurfer/mri_evaluate_morph.py' 2026-06-06T23:53:08,034 adding 'freesurfer/mri_extract.py' 2026-06-06T23:53:08,036 adding 'freesurfer/mri_extract_fcd_features.py' 2026-06-06T23:53:08,037 adding 'freesurfer/mri_extract_label.py' 2026-06-06T23:53:08,039 adding 'freesurfer/mri_extract_largest_cc.py' 2026-06-06T23:53:08,041 adding 'freesurfer/mri_exvivo_norm.py' 2026-06-06T23:53:08,043 adding 'freesurfer/mri_exvivo_strip.py' 2026-06-06T23:53:08,044 adding 'freesurfer/mri_fdr.py' 2026-06-06T23:53:08,046 adding 'freesurfer/mri_fieldsign.py' 2026-06-06T23:53:08,048 adding 'freesurfer/mri_fill.py' 2026-06-06T23:53:08,050 adding 'freesurfer/mri_fit_bias.py' 2026-06-06T23:53:08,052 adding 'freesurfer/mri_fslmat_to_lta.py' 2026-06-06T23:53:08,053 adding 'freesurfer/mri_func2sph.py' 2026-06-06T23:53:08,055 adding 'freesurfer/mri_funcvits.py' 2026-06-06T23:53:08,056 adding 'freesurfer/mri_fuse_intensity_images.py' 2026-06-06T23:53:08,058 adding 'freesurfer/mri_fuse_segmentations.py' 2026-06-06T23:53:08,061 adding 'freesurfer/mri_fwhm.py' 2026-06-06T23:53:08,062 adding 'freesurfer/mri_gca_ambiguous.py' 2026-06-06T23:53:08,064 adding 'freesurfer/mri_gcab_train.py' 2026-06-06T23:53:08,066 adding 'freesurfer/mri_gcut.py' 2026-06-06T23:53:08,067 adding 'freesurfer/mri_gdfglm.py' 2026-06-06T23:53:08,072 adding 'freesurfer/mri_glmfit.py' 2026-06-06T23:53:08,075 adding 'freesurfer/mri_glmfit_sim.py' 2026-06-06T23:53:08,077 adding 'freesurfer/mri_gradient_info.py' 2026-06-06T23:53:08,078 adding 'freesurfer/mri_gradunwarp.py' 2026-06-06T23:53:08,083 adding 'freesurfer/mri_gtmpvc.py' 2026-06-06T23:53:08,085 adding 'freesurfer/mri_gtmseg.py' 2026-06-06T23:53:08,087 adding 'freesurfer/mri_hausdorff_dist.py' 2026-06-06T23:53:08,088 adding 'freesurfer/mri_head.py' 2026-06-06T23:53:08,090 adding 'freesurfer/mri_hires_register.py' 2026-06-06T23:53:08,091 adding 'freesurfer/mri_histo_eq.py' 2026-06-06T23:53:08,094 adding 'freesurfer/mri_info.py' 2026-06-06T23:53:08,096 adding 'freesurfer/mri_jacobian.py' 2026-06-06T23:53:08,097 adding 'freesurfer/mri_joint_density.py' 2026-06-06T23:53:08,100 adding 'freesurfer/mri_label2label.py' 2026-06-06T23:53:08,102 adding 'freesurfer/mri_label2vol.py' 2026-06-06T23:53:08,104 adding 'freesurfer/mri_label_histo.py' 2026-06-06T23:53:08,105 adding 'freesurfer/mri_label_vals.py' 2026-06-06T23:53:08,107 adding 'freesurfer/mri_label_volume.py' 2026-06-06T23:53:08,109 adding 'freesurfer/mri_linear_align.py' 2026-06-06T23:53:08,110 adding 'freesurfer/mri_linear_align_binary.py' 2026-06-06T23:53:08,112 adding 'freesurfer/mri_linear_register.py' 2026-06-06T23:53:08,113 adding 'freesurfer/mri_log_likelihood.py' 2026-06-06T23:53:08,115 adding 'freesurfer/mri_long_normalize.py' 2026-06-06T23:53:08,117 adding 'freesurfer/mri_make_bem_surfaces.py' 2026-06-06T23:53:08,119 adding 'freesurfer/mri_make_uchar.py' 2026-06-06T23:53:08,120 adding 'freesurfer/mri_map_cpdat.py' 2026-06-06T23:53:08,122 adding 'freesurfer/mri_maps2csd.py' 2026-06-06T23:53:08,124 adding 'freesurfer/mri_mark_temporal_lobe.py' 2026-06-06T23:53:08,126 adding 'freesurfer/mri_mask.py' 2026-06-06T23:53:08,128 adding 'freesurfer/mri_matrix_multiply.py' 2026-06-06T23:53:08,130 adding 'freesurfer/mri_mc.py' 2026-06-06T23:53:08,132 adding 'freesurfer/mri_mcsim.py' 2026-06-06T23:53:08,134 adding 'freesurfer/mri_mergelabels.py' 2026-06-06T23:53:08,135 adding 'freesurfer/mri_mi.py' 2026-06-06T23:53:08,137 adding 'freesurfer/mri_modify.py' 2026-06-06T23:53:08,139 adding 'freesurfer/mri_morphology.py' 2026-06-06T23:53:08,141 adding 'freesurfer/mri_motion_correct.py' 2026-06-06T23:53:08,142 adding 'freesurfer/mri_motion_correct2.py' 2026-06-06T23:53:08,145 adding 'freesurfer/mri_ms_fitparms.py' 2026-06-06T23:53:08,148 adding 'freesurfer/mri_nl_align.py' 2026-06-06T23:53:08,150 adding 'freesurfer/mri_nl_align_binary.py' 2026-06-06T23:53:08,152 adding 'freesurfer/mri_nlfilter.py' 2026-06-06T23:53:08,154 adding 'freesurfer/mri_normalize.py' 2026-06-06T23:53:08,156 adding 'freesurfer/mri_normalize_tp2.py' 2026-06-06T23:53:08,158 adding 'freesurfer/mri_nu_correct_mni.py' 2026-06-06T23:53:08,160 adding 'freesurfer/mri_or.py' 2026-06-06T23:53:08,161 adding 'freesurfer/mri_paint.py' 2026-06-06T23:53:08,163 adding 'freesurfer/mri_parse_sdcmdir.py' 2026-06-06T23:53:08,164 adding 'freesurfer/mri_path2label.py' 2026-06-06T23:53:08,166 adding 'freesurfer/mri_polv.py' 2026-06-06T23:53:08,167 adding 'freesurfer/mri_pretess.py' 2026-06-06T23:53:08,169 adding 'freesurfer/mri_probe_ima.py' 2026-06-06T23:53:08,171 adding 'freesurfer/mri_probedicom.py' 2026-06-06T23:53:08,172 adding 'freesurfer/mri_reduce.py' 2026-06-06T23:53:08,173 adding 'freesurfer/mri_refine_seg.py' 2026-06-06T23:53:08,175 adding 'freesurfer/mri_relabel_hypointensities.py' 2026-06-06T23:53:08,176 adding 'freesurfer/mri_relabel_nonwm_hypos.py' 2026-06-06T23:53:08,178 adding 'freesurfer/mri_remove_neck.py' 2026-06-06T23:53:08,180 adding 'freesurfer/mri_reorient_lr_csh.py' 2026-06-06T23:53:08,183 adding 'freesurfer/mri_rf_label.py' 2026-06-06T23:53:08,184 adding 'freesurfer/mri_rf_long_label.py' 2026-06-06T23:53:08,186 adding 'freesurfer/mri_rf_long_train.py' 2026-06-06T23:53:08,188 adding 'freesurfer/mri_rf_train.py' 2026-06-06T23:53:08,189 adding 'freesurfer/mri_ribbon.py' 2026-06-06T23:53:08,191 adding 'freesurfer/mri_rigid_register.py' 2026-06-06T23:53:08,194 adding 'freesurfer/mri_robust_register.py' 2026-06-06T23:53:08,198 adding 'freesurfer/mri_robust_template.py' 2026-06-06T23:53:08,200 adding 'freesurfer/mri_sbbr.py' 2026-06-06T23:53:08,202 adding 'freesurfer/mri_sclimbic_seg.py' 2026-06-06T23:53:08,204 adding 'freesurfer/mri_seg_diff.py' 2026-06-06T23:53:08,206 adding 'freesurfer/mri_seg_overlap.py' 2026-06-06T23:53:08,207 adding 'freesurfer/mri_segcentroids.py' 2026-06-06T23:53:08,209 adding 'freesurfer/mri_seghead.py' 2026-06-06T23:53:08,212 adding 'freesurfer/mri_segment.py' 2026-06-06T23:53:08,214 adding 'freesurfer/mri_segment_hypothalamic_subunits.py' 2026-06-06T23:53:08,216 adding 'freesurfer/mri_segment_thalamic_nuclei_dti_cnn.py' 2026-06-06T23:53:08,217 adding 'freesurfer/mri_segreg.py' 2026-06-06T23:53:08,222 adding 'freesurfer/mri_segstats.py' 2026-06-06T23:53:08,224 adding 'freesurfer/mri_sph2surf.py' 2026-06-06T23:53:08,225 adding 'freesurfer/mri_stats2seg.py' 2026-06-06T23:53:08,227 adding 'freesurfer/mri_stopmask.py' 2026-06-06T23:53:08,228 adding 'freesurfer/mri_strip_nonwhite.py' 2026-06-06T23:53:08,230 adding 'freesurfer/mri_strip_subject_info.py' 2026-06-06T23:53:08,234 adding 'freesurfer/mri_surf2surf.py' 2026-06-06T23:53:08,236 adding 'freesurfer/mri_surf2vol.py' 2026-06-06T23:53:08,239 adding 'freesurfer/mri_surf2volseg.py' 2026-06-06T23:53:08,241 adding 'freesurfer/mri_surfacemask.py' 2026-06-06T23:53:08,244 adding 'freesurfer/mri_surfcluster.py' 2026-06-06T23:53:08,245 adding 'freesurfer/mri_synthesize.py' 2026-06-06T23:53:08,247 adding 'freesurfer/mri_synthmorph.py' 2026-06-06T23:53:08,250 adding 'freesurfer/mri_synthseg.py' 2026-06-06T23:53:08,252 adding 'freesurfer/mri_synthsr.py' 2026-06-06T23:53:08,253 adding 'freesurfer/mri_synthsr_hyperfine.py' 2026-06-06T23:53:08,255 adding 'freesurfer/mri_synthstrip.py' 2026-06-06T23:53:08,257 adding 'freesurfer/mri_tessellate.py' 2026-06-06T23:53:08,258 adding 'freesurfer/mri_threshold.py' 2026-06-06T23:53:08,260 adding 'freesurfer/mri_topologycorrection.py' 2026-06-06T23:53:08,261 adding 'freesurfer/mri_train.py' 2026-06-06T23:53:08,263 adding 'freesurfer/mri_transform.py' 2026-06-06T23:53:08,264 adding 'freesurfer/mri_twoclass.py' 2026-06-06T23:53:08,266 adding 'freesurfer/mri_validate_skull_stripped.py' 2026-06-06T23:53:08,267 adding 'freesurfer/mri_vessel_segment.py' 2026-06-06T23:53:08,269 adding 'freesurfer/mri_vol2label.py' 2026-06-06T23:53:08,271 adding 'freesurfer/mri_vol2surf.py' 2026-06-06T23:53:08,274 adding 'freesurfer/mri_vol2vol.py' 2026-06-06T23:53:08,278 adding 'freesurfer/mri_volcluster.py' 2026-06-06T23:53:08,280 adding 'freesurfer/mri_voldiff.py' 2026-06-06T23:53:08,283 adding 'freesurfer/mri_volsynth.py' 2026-06-06T23:53:08,285 adding 'freesurfer/mri_warp_convert.py' 2026-06-06T23:53:08,287 adding 'freesurfer/mri_watershed.py' 2026-06-06T23:53:08,289 adding 'freesurfer/mri_wbc.py' 2026-06-06T23:53:08,291 adding 'freesurfer/mri_xvolavg.py' 2026-06-06T23:53:08,293 adding 'freesurfer/mri_z2p.py' 2026-06-06T23:53:08,294 adding 'freesurfer/mris2rgb.py' 2026-06-06T23:53:08,296 adding 'freesurfer/mris_aa_shrinkwrap.py' 2026-06-06T23:53:08,297 adding 'freesurfer/mris_add_template.py' 2026-06-06T23:53:08,299 adding 'freesurfer/mris_anatomical_stats.py' 2026-06-06T23:53:08,301 adding 'freesurfer/mris_annot_diff.py' 2026-06-06T23:53:08,303 adding 'freesurfer/mris_annot_to_segmentation.py' 2026-06-06T23:53:08,305 adding 'freesurfer/mris_apply_reg.py' 2026-06-06T23:53:08,307 adding 'freesurfer/mris_autodet_gwstats.py' 2026-06-06T23:53:08,308 adding 'freesurfer/mris_average_curvature.py' 2026-06-06T23:53:08,310 adding 'freesurfer/mris_ba_segment.py' 2026-06-06T23:53:08,312 adding 'freesurfer/mris_ca_deform.py' 2026-06-06T23:53:08,314 adding 'freesurfer/mris_ca_label.py' 2026-06-06T23:53:08,316 adding 'freesurfer/mris_ca_train.py' 2026-06-06T23:53:08,318 adding 'freesurfer/mris_calc.py' 2026-06-06T23:53:08,320 adding 'freesurfer/mris_compute_acorr.py' 2026-06-06T23:53:08,321 adding 'freesurfer/mris_compute_layer_intensities.py' 2026-06-06T23:53:08,323 adding 'freesurfer/mris_compute_lgi.py' 2026-06-06T23:53:08,324 adding 'freesurfer/mris_compute_overlap.py' 2026-06-06T23:53:08,326 adding 'freesurfer/mris_compute_parc_overlap.py' 2026-06-06T23:53:08,328 adding 'freesurfer/mris_compute_volume_fractions.py' 2026-06-06T23:53:08,330 adding 'freesurfer/mris_congeal.py' 2026-06-06T23:53:08,333 adding 'freesurfer/mris_convert.py' 2026-06-06T23:53:08,335 adding 'freesurfer/mris_copy_header.py' 2026-06-06T23:53:08,337 adding 'freesurfer/mris_curvature.py' 2026-06-06T23:53:08,338 adding 'freesurfer/mris_curvature2image.py' 2026-06-06T23:53:08,341 adding 'freesurfer/mris_curvature_stats.py' 2026-06-06T23:53:08,343 adding 'freesurfer/mris_defects_pointset.py' 2026-06-06T23:53:08,344 adding 'freesurfer/mris_deform.py' 2026-06-06T23:53:08,347 adding 'freesurfer/mris_diff.py' 2026-06-06T23:53:08,348 adding 'freesurfer/mris_distance_map.py' 2026-06-06T23:53:08,350 adding 'freesurfer/mris_distance_to_label.py' 2026-06-06T23:53:08,351 adding 'freesurfer/mris_distance_transform.py' 2026-06-06T23:53:08,353 adding 'freesurfer/mris_divide_parcellation.py' 2026-06-06T23:53:08,355 adding 'freesurfer/mris_entropy.py' 2026-06-06T23:53:08,356 adding 'freesurfer/mris_errors.py' 2026-06-06T23:53:08,358 adding 'freesurfer/mris_estimate_wm.py' 2026-06-06T23:53:08,359 adding 'freesurfer/mris_euler_number.py' 2026-06-06T23:53:08,361 adding 'freesurfer/mris_expand.py' 2026-06-06T23:53:08,363 adding 'freesurfer/mris_extract_main_component.py' 2026-06-06T23:53:08,364 adding 'freesurfer/mris_extract_patches.py' 2026-06-06T23:53:08,366 adding 'freesurfer/mris_extract_values.py' 2026-06-06T23:53:08,368 adding 'freesurfer/mris_exvivo_surfaces.py' 2026-06-06T23:53:08,369 adding 'freesurfer/mris_fill.py' 2026-06-06T23:53:08,371 adding 'freesurfer/mris_find_flat_regions.py' 2026-06-06T23:53:08,373 adding 'freesurfer/mris_fix_topology.py' 2026-06-06T23:53:08,375 adding 'freesurfer/mris_flatten.py' 2026-06-06T23:53:08,378 adding 'freesurfer/mris_fwhm.py' 2026-06-06T23:53:08,379 adding 'freesurfer/mris_gradient.py' 2026-06-06T23:53:08,381 adding 'freesurfer/mris_hausdorff_dist.py' 2026-06-06T23:53:08,383 adding 'freesurfer/mris_image2vtk.py' 2026-06-06T23:53:08,385 adding 'freesurfer/mris_inflate.py' 2026-06-06T23:53:08,387 adding 'freesurfer/mris_info.py' 2026-06-06T23:53:08,389 adding 'freesurfer/mris_init_global_tractography.py' 2026-06-06T23:53:08,391 adding 'freesurfer/mris_intensity_profile.py' 2026-06-06T23:53:08,392 adding 'freesurfer/mris_interpolate_warp.py' 2026-06-06T23:53:08,394 adding 'freesurfer/mris_jacobian.py' 2026-06-06T23:53:08,396 adding 'freesurfer/mris_label2annot.py' 2026-06-06T23:53:08,398 adding 'freesurfer/mris_label_area.py' 2026-06-06T23:53:08,399 adding 'freesurfer/mris_label_calc.py' 2026-06-06T23:53:08,401 adding 'freesurfer/mris_label_mode.py' 2026-06-06T23:53:08,403 adding 'freesurfer/mris_left_right_register.py' 2026-06-06T23:53:08,405 adding 'freesurfer/mris_make_average_surface.py' 2026-06-06T23:53:08,406 adding 'freesurfer/mris_make_face_parcellation.py' 2026-06-06T23:53:08,410 adding 'freesurfer/mris_make_surfaces.py' 2026-06-06T23:53:08,412 adding 'freesurfer/mris_make_template.py' 2026-06-06T23:53:08,413 adding 'freesurfer/mris_map_cuts.py' 2026-06-06T23:53:08,415 adding 'freesurfer/mris_mef_surfaces.py' 2026-06-06T23:53:08,416 adding 'freesurfer/mris_merge_parcellations.py' 2026-06-06T23:53:08,418 adding 'freesurfer/mris_mesh_subdivide.py' 2026-06-06T23:53:08,420 adding 'freesurfer/mris_morph_stats.py' 2026-06-06T23:53:08,421 adding 'freesurfer/mris_ms_refine.py' 2026-06-06T23:53:08,423 adding 'freesurfer/mris_multimodal.py' 2026-06-06T23:53:08,425 adding 'freesurfer/mris_multimodal_surface_placement.py' 2026-06-06T23:53:08,427 adding 'freesurfer/mris_multiscale_stats.py' 2026-06-06T23:53:08,428 adding 'freesurfer/mris_niters2fwhm.py' 2026-06-06T23:53:08,430 adding 'freesurfer/mris_nudge.py' 2026-06-06T23:53:08,431 adding 'freesurfer/mris_parcellate_connectivity.py' 2026-06-06T23:53:08,435 adding 'freesurfer/mris_place_surface.py' 2026-06-06T23:53:08,437 adding 'freesurfer/mris_pmake.py' 2026-06-06T23:53:08,440 adding 'freesurfer/mris_preproc.py' 2026-06-06T23:53:08,442 adding 'freesurfer/mris_profile_clustering.py' 2026-06-06T23:53:08,443 adding 'freesurfer/mris_refine_surfaces.py' 2026-06-06T23:53:08,448 adding 'freesurfer/mris_register.py' 2026-06-06T23:53:08,450 adding 'freesurfer/mris_register_label_map.py' 2026-06-06T23:53:08,451 adding 'freesurfer/mris_register_to_label.py' 2026-06-06T23:53:08,454 adding 'freesurfer/mris_register_to_volume.py' 2026-06-06T23:53:08,456 adding 'freesurfer/mris_remesh.py' 2026-06-06T23:53:08,457 adding 'freesurfer/mris_remove_intersection.py' 2026-06-06T23:53:08,459 adding 'freesurfer/mris_remove_negative_vertices.py' 2026-06-06T23:53:08,460 adding 'freesurfer/mris_remove_variance.py' 2026-06-06T23:53:08,462 adding 'freesurfer/mris_reposition_surface.py' 2026-06-06T23:53:08,463 adding 'freesurfer/mris_resample.py' 2026-06-06T23:53:08,465 adding 'freesurfer/mris_rescale.py' 2026-06-06T23:53:08,466 adding 'freesurfer/mris_reverse.py' 2026-06-06T23:53:08,468 adding 'freesurfer/mris_rf_label.py' 2026-06-06T23:53:08,469 adding 'freesurfer/mris_rf_train.py' 2026-06-06T23:53:08,471 adding 'freesurfer/mris_rotate.py' 2026-06-06T23:53:08,473 adding 'freesurfer/mris_sample_label.py' 2026-06-06T23:53:08,475 adding 'freesurfer/mris_sample_parc.py' 2026-06-06T23:53:08,477 adding 'freesurfer/mris_seg2annot.py' 2026-06-06T23:53:08,478 adding 'freesurfer/mris_segment.py' 2026-06-06T23:53:08,480 adding 'freesurfer/mris_segment_vals.py' 2026-06-06T23:53:08,481 adding 'freesurfer/mris_segmentation_stats.py' 2026-06-06T23:53:08,483 adding 'freesurfer/mris_shrinkwrap.py' 2026-06-06T23:53:08,484 adding 'freesurfer/mris_simulate_atrophy.py' 2026-06-06T23:53:08,486 adding 'freesurfer/mris_skeletonize.py' 2026-06-06T23:53:08,488 adding 'freesurfer/mris_smooth.py' 2026-06-06T23:53:08,490 adding 'freesurfer/mris_smooth_intracortical.py' 2026-06-06T23:53:08,492 adding 'freesurfer/mris_sphere.py' 2026-06-06T23:53:08,494 adding 'freesurfer/mris_spherical_average.py' 2026-06-06T23:53:08,495 adding 'freesurfer/mris_surf2vtk.py' 2026-06-06T23:53:08,497 adding 'freesurfer/mris_surface_stats.py' 2026-06-06T23:53:08,499 adding 'freesurfer/mris_surface_to_vol_distances.py' 2026-06-06T23:53:08,500 adding 'freesurfer/mris_talairach.py' 2026-06-06T23:53:08,502 adding 'freesurfer/mris_target_pos.py' 2026-06-06T23:53:08,504 adding 'freesurfer/mris_thickness.py' 2026-06-06T23:53:08,505 adding 'freesurfer/mris_thickness_comparison.py' 2026-06-06T23:53:08,507 adding 'freesurfer/mris_thickness_diff.py' 2026-06-06T23:53:08,508 adding 'freesurfer/mris_topo_fixer.py' 2026-06-06T23:53:08,510 adding 'freesurfer/mris_transform.py' 2026-06-06T23:53:08,511 adding 'freesurfer/mris_translate_annotation.py' 2026-06-06T23:53:08,513 adding 'freesurfer/mris_transmantle_dysplasia_paths.py' 2026-06-06T23:53:08,515 adding 'freesurfer/mris_volmask.py' 2026-06-06T23:53:08,517 adding 'freesurfer/mris_volmask_novtk.py' 2026-06-06T23:53:08,519 adding 'freesurfer/mris_volmask_vtk.py' 2026-06-06T23:53:08,521 adding 'freesurfer/mris_volsmooth.py' 2026-06-06T23:53:08,523 adding 'freesurfer/mris_volume.py' 2026-06-06T23:53:08,525 adding 'freesurfer/mris_warp.py' 2026-06-06T23:53:08,526 adding 'freesurfer/mris_watershed.py' 2026-06-06T23:53:08,528 adding 'freesurfer/mris_wm_volume.py' 2026-06-06T23:53:08,530 adding 'freesurfer/mrisp_paint.py' 2026-06-06T23:53:08,532 adding 'freesurfer/mrisp_write.py' 2026-06-06T23:53:08,533 adding 'freesurfer/ms_refine_subject.py' 2026-06-06T23:53:08,535 adding 'freesurfer/nmovie_qt.py' 2026-06-06T23:53:08,536 adding 'freesurfer/oct_register_mosaic.py' 2026-06-06T23:53:08,539 adding 'freesurfer/optseq2.py' 2026-06-06T23:53:08,540 adding 'freesurfer/orient_las.py' 2026-06-06T23:53:08,542 adding 'freesurfer/parc_atlas_jackknife_test.py' 2026-06-06T23:53:08,544 adding 'freesurfer/pctsurfcon.py' 2026-06-06T23:53:08,545 adding 'freesurfer/plot_structure_stats_tcl.py' 2026-06-06T23:53:08,547 adding 'freesurfer/pointset2label.py' 2026-06-06T23:53:08,548 adding 'freesurfer/polyorder.py' 2026-06-06T23:53:08,550 adding 'freesurfer/post_recon_all.py' 2026-06-06T23:53:08,552 adding 'freesurfer/predict_v1_sh.py' 2026-06-06T23:53:08,554 adding 'freesurfer/print_unique_labels_csh.py' 2026-06-06T23:53:08,555 adding 'freesurfer/py.typed' 2026-06-06T23:53:08,557 adding 'freesurfer/qatools_py.py' 2026-06-06T23:53:08,558 adding 'freesurfer/quantify_brainstem_structures_sh.py' 2026-06-06T23:53:08,560 adding 'freesurfer/quantify_h_asubregions_sh.py' 2026-06-06T23:53:08,561 adding 'freesurfer/quantify_thalamic_nuclei_sh.py' 2026-06-06T23:53:08,563 adding 'freesurfer/rbbr.py' 2026-06-06T23:53:08,565 adding 'freesurfer/rca_base_init.py' 2026-06-06T23:53:08,566 adding 'freesurfer/rca_config.py' 2026-06-06T23:53:08,568 adding 'freesurfer/rca_config2csh.py' 2026-06-06T23:53:08,569 adding 'freesurfer/rca_fix_ento.py' 2026-06-06T23:53:08,571 adding 'freesurfer/rca_long_tp_init.py' 2026-06-06T23:53:08,573 adding 'freesurfer/rcbf_prep.py' 2026-06-06T23:53:08,577 adding 'freesurfer/recon_all.py' 2026-06-06T23:53:08,579 adding 'freesurfer/recon_all_clinical_sh.py' 2026-06-06T23:53:08,580 adding 'freesurfer/recon_all_exvivo.py' 2026-06-06T23:53:08,582 adding 'freesurfer/reconbatchjobs.py' 2026-06-06T23:53:08,583 adding 'freesurfer/reg2subject.py' 2026-06-06T23:53:08,585 adding 'freesurfer/reg_feat2anat.py' 2026-06-06T23:53:08,587 adding 'freesurfer/reg_mni305_2mm.py' 2026-06-06T23:53:08,588 adding 'freesurfer/regdat2xfm.py' 2026-06-06T23:53:08,590 adding 'freesurfer/register_child.py' 2026-06-06T23:53:08,591 adding 'freesurfer/register_csh.py' 2026-06-06T23:53:08,593 adding 'freesurfer/register_elderly_subject.py' 2026-06-06T23:53:08,595 adding 'freesurfer/register_subject.py' 2026-06-06T23:53:08,597 adding 'freesurfer/register_subject_flash.py' 2026-06-06T23:53:08,598 adding 'freesurfer/reinflate_subject.py' 2026-06-06T23:53:08,600 adding 'freesurfer/reinflate_subject_lh.py' 2026-06-06T23:53:08,601 adding 'freesurfer/reinflate_subject_rh.py' 2026-06-06T23:53:08,603 adding 'freesurfer/remove_talairach.py' 2026-06-06T23:53:08,604 adding 'freesurfer/renormalize_subject_keep_editting.py' 2026-06-06T23:53:08,606 adding 'freesurfer/renormalize_t1_subject.py' 2026-06-06T23:53:08,607 adding 'freesurfer/reregister_subject_mixed.py' 2026-06-06T23:53:08,609 adding 'freesurfer/rtview.py' 2026-06-06T23:53:08,610 adding 'freesurfer/run_mris_preproc.py' 2026-06-06T23:53:08,612 adding 'freesurfer/run_qdec_glm.py' 2026-06-06T23:53:08,614 adding 'freesurfer/run_samseg.py' 2026-06-06T23:53:08,616 adding 'freesurfer/run_samseg_long.py' 2026-06-06T23:53:08,618 adding 'freesurfer/run_segment_subfields_t1_longitudinal_sh.py' 2026-06-06T23:53:08,619 adding 'freesurfer/run_segment_subject_sh.py' 2026-06-06T23:53:08,621 adding 'freesurfer/run_segment_subject_t1_auto_estimate_alveus_ml_sh.py' 2026-06-06T23:53:08,622 adding 'freesurfer/run_segment_subject_t1_t2_auto_estimate_alveus_ml_sh.py' 2026-06-06T23:53:08,623 adding 'freesurfer/run_segment_subject_t2_auto_estimate_alveus_ml_sh.py' 2026-06-06T23:53:08,625 adding 'freesurfer/run_segment_thalamic_nuclei_sh.py' 2026-06-06T23:53:08,628 adding 'freesurfer/samseg.py' 2026-06-06T23:53:08,630 adding 'freesurfer/samseg2recon.py' 2026-06-06T23:53:08,632 adding 'freesurfer/samseg_long.py' 2026-06-06T23:53:08,633 adding 'freesurfer/samsegmesh2surf.py' 2026-06-06T23:53:08,635 adding 'freesurfer/sbtiv.py' 2026-06-06T23:53:08,637 adding 'freesurfer/seg2filled.py' 2026-06-06T23:53:08,639 adding 'freesurfer/seg2recon.py' 2026-06-06T23:53:08,640 adding 'freesurfer/segment_bs_sh.py' 2026-06-06T23:53:08,642 adding 'freesurfer/segment_ha_t1_long_sh.py' 2026-06-06T23:53:08,643 adding 'freesurfer/segment_ha_t1_sh.py' 2026-06-06T23:53:08,645 adding 'freesurfer/segment_ha_t2_sh.py' 2026-06-06T23:53:08,646 adding 'freesurfer/segment_monkey.py' 2026-06-06T23:53:08,648 adding 'freesurfer/segment_subfields_t1_longitudinal.py' 2026-06-06T23:53:08,650 adding 'freesurfer/segment_subject.py' 2026-06-06T23:53:08,651 adding 'freesurfer/segment_subject_notal.py' 2026-06-06T23:53:08,653 adding 'freesurfer/segment_subject_notal2.py' 2026-06-06T23:53:08,654 adding 'freesurfer/segment_subject_old_skull_strip.py' 2026-06-06T23:53:08,656 adding 'freesurfer/segment_subject_sc.py' 2026-06-06T23:53:08,657 adding 'freesurfer/segment_subject_t1_auto_estimate_alveus_ml.py' 2026-06-06T23:53:08,659 adding 'freesurfer/segment_subject_t1_t2_auto_estimate_alveus_ml.py' 2026-06-06T23:53:08,661 adding 'freesurfer/segment_subject_t2_auto_estimate_alveus_ml.py' 2026-06-06T23:53:08,662 adding 'freesurfer/segment_subregions.py' 2026-06-06T23:53:08,664 adding 'freesurfer/segment_thalamic_nuclei.py' 2026-06-06T23:53:08,665 adding 'freesurfer/segment_thalamic_nuclei_sh.py' 2026-06-06T23:53:08,667 adding 'freesurfer/segpons.py' 2026-06-06T23:53:08,669 adding 'freesurfer/setlabelstat.py' 2026-06-06T23:53:08,671 adding 'freesurfer/sfa2fieldsign.py' 2026-06-06T23:53:08,672 adding 'freesurfer/slicedelay.py' 2026-06-06T23:53:08,674 adding 'freesurfer/sphere_subject.py' 2026-06-06T23:53:08,675 adding 'freesurfer/sphere_subject_lh.py' 2026-06-06T23:53:08,677 adding 'freesurfer/sphere_subject_rh.py' 2026-06-06T23:53:08,678 adding 'freesurfer/spline3_test.py' 2026-06-06T23:53:08,680 adding 'freesurfer/spm_t_to_b.py' 2026-06-06T23:53:08,682 adding 'freesurfer/spmregister.py' 2026-06-06T23:53:08,683 adding 'freesurfer/sratio.py' 2026-06-06T23:53:08,685 adding 'freesurfer/stat_normalize.py' 2026-06-06T23:53:08,687 adding 'freesurfer/stattablediff.py' 2026-06-06T23:53:08,688 adding 'freesurfer/stem2fname.py' 2026-06-06T23:53:08,690 adding 'freesurfer/surf2vol.py' 2026-06-06T23:53:08,692 adding 'freesurfer/surfreg.py' 2026-06-06T23:53:08,694 adding 'freesurfer/swi_preprocess.py' 2026-06-06T23:53:08,696 adding 'freesurfer/swi_process.py' 2026-06-06T23:53:08,697 adding 'freesurfer/t4img_4dfp.py' 2026-06-06T23:53:08,699 adding 'freesurfer/t4imgs_4dfp.py' 2026-06-06T23:53:08,701 adding 'freesurfer/table2map.py' 2026-06-06T23:53:08,702 adding 'freesurfer/tal_compare.py' 2026-06-06T23:53:08,704 adding 'freesurfer/tal_qc_azs.py' 2026-06-06T23:53:08,705 adding 'freesurfer/talairach.py' 2026-06-06T23:53:08,707 adding 'freesurfer/talairach2.py' 2026-06-06T23:53:08,708 adding 'freesurfer/talairach_afd.py' 2026-06-06T23:53:08,710 adding 'freesurfer/talairach_avi.py' 2026-06-06T23:53:08,711 adding 'freesurfer/talairach_mgh.py' 2026-06-06T23:53:08,713 adding 'freesurfer/talsegprob.py' 2026-06-06T23:53:08,715 adding 'freesurfer/test_orientation_planes_from_parcellation.py' 2026-06-06T23:53:08,716 adding 'freesurfer/test_recon_all_csh.py' 2026-06-06T23:53:08,718 adding 'freesurfer/test_tutorials_sh.py' 2026-06-06T23:53:08,720 adding 'freesurfer/thickdiffmap.py' 2026-06-06T23:53:08,721 adding 'freesurfer/tkmedit.py' 2026-06-06T23:53:08,724 adding 'freesurfer/tkmeditfv.py' 2026-06-06T23:53:08,725 adding 'freesurfer/tkregister2.py' 2026-06-06T23:53:08,729 adding 'freesurfer/tkregister2_cmdl.py' 2026-06-06T23:53:08,732 adding 'freesurfer/tkregisterfv.py' 2026-06-06T23:53:08,733 adding 'freesurfer/tksurfer.py' 2026-06-06T23:53:08,735 adding 'freesurfer/tksurferfv.py' 2026-06-06T23:53:08,737 adding 'freesurfer/trac_all.py' 2026-06-06T23:53:08,739 adding 'freesurfer/trac_paths.py' 2026-06-06T23:53:08,741 adding 'freesurfer/trac_preproc.py' 2026-06-06T23:53:08,743 adding 'freesurfer/tractstats2table.py' 2026-06-06T23:53:08,745 adding 'freesurfer/train_gcs_atlas.py' 2026-06-06T23:53:08,746 adding 'freesurfer/tridec.py' 2026-06-06T23:53:08,748 adding 'freesurfer/trk_tools.py' 2026-06-06T23:53:08,750 adding 'freesurfer/unpack_ima1_tcl.py' 2026-06-06T23:53:08,751 adding 'freesurfer/unpack_ima_tcl.py' 2026-06-06T23:53:08,752 adding 'freesurfer/unpack_mnc_tcl.py' 2026-06-06T23:53:08,754 adding 'freesurfer/unpackimadir.py' 2026-06-06T23:53:08,755 adding 'freesurfer/unpackimadir2.py' 2026-06-06T23:53:08,757 adding 'freesurfer/unpackmincdir.py' 2026-06-06T23:53:08,758 adding 'freesurfer/unpacksdcmdir.py' 2026-06-06T23:53:08,760 adding 'freesurfer/update_needed.py' 2026-06-06T23:53:08,761 adding 'freesurfer/v_3dvolreg_afni.py' 2026-06-06T23:53:08,763 adding 'freesurfer/v_4dfptoanalyze.py' 2026-06-06T23:53:08,764 adding 'freesurfer/ventfix.py' 2026-06-06T23:53:08,766 adding 'freesurfer/vertexvol.py' 2026-06-06T23:53:08,767 adding 'freesurfer/vno_match_check.py' 2026-06-06T23:53:08,770 adding 'freesurfer/vol2segavg.py' 2026-06-06T23:53:08,772 adding 'freesurfer/vol2subfield.py' 2026-06-06T23:53:08,774 adding 'freesurfer/vol2symsurf.py' 2026-06-06T23:53:08,775 adding 'freesurfer/vsm_smooth.py' 2026-06-06T23:53:08,777 adding 'freesurfer/wfilemask.py' 2026-06-06T23:53:08,778 adding 'freesurfer/wm_anat_snr.py' 2026-06-06T23:53:08,780 adding 'freesurfer/wmedits2surf.py' 2026-06-06T23:53:08,782 adding 'freesurfer/wmsaseg.py' 2026-06-06T23:53:08,783 adding 'freesurfer/xcerebralseg.py' 2026-06-06T23:53:08,785 adding 'freesurfer/xcorr.py' 2026-06-06T23:53:08,786 adding 'freesurfer/xfmrot.py' 2026-06-06T23:53:08,788 adding 'freesurfer/xhemi_tal.py' 2026-06-06T23:53:08,789 adding 'freesurfer/xhemireg.py' 2026-06-06T23:53:08,791 adding 'freesurfer/xsanatreg.py' 2026-06-06T23:53:08,793 adding 'freesurfer/zero_lt_4dfp.py' 2026-06-06T23:53:08,795 adding 'niwrap_freesurfer-1.0.1.dist-info/METADATA' 2026-06-06T23:53:08,796 adding 'niwrap_freesurfer-1.0.1.dist-info/WHEEL' 2026-06-06T23:53:08,797 adding 'niwrap_freesurfer-1.0.1.dist-info/top_level.txt' 2026-06-06T23:53:08,808 adding 'niwrap_freesurfer-1.0.1.dist-info/RECORD' 2026-06-06T23:53:08,841 removing build/bdist.linux-armv7l/wheel 2026-06-06T23:53:09,097 Building wheel for niwrap-freesurfer (pyproject.toml): finished with status 'done' 2026-06-06T23:53:09,130 Created wheel for niwrap-freesurfer: filename=niwrap_freesurfer-1.0.1-py3-none-any.whl size=1561408 sha256=54026df893790961f8837010f74cff8aace7bebd37c4ba13c69f97a61f2d856d 2026-06-06T23:53:09,131 Stored in directory: /tmp/pip-ephem-wheel-cache-9179mp5o/wheels/fa/27/fd/bf3f68d76b1e8f6ea2b7766af0e2f330107644790cf818021f 2026-06-06T23:53:09,163 Successfully built niwrap-freesurfer 2026-06-06T23:53:09,201 Removed build tracker: '/tmp/pip-build-tracker-wnsmef4n'