2026-06-15T14:10:32,238 Created temporary directory: /tmp/pip-ephem-wheel-cache-r5xmczl2 2026-06-15T14:10:32,240 Created temporary directory: /tmp/pip-build-tracker-uhpg2pt7 2026-06-15T14:10:32,241 Initialized build tracking at /tmp/pip-build-tracker-uhpg2pt7 2026-06-15T14:10:32,241 Created build tracker: /tmp/pip-build-tracker-uhpg2pt7 2026-06-15T14:10:32,242 Entered build tracker: /tmp/pip-build-tracker-uhpg2pt7 2026-06-15T14:10:32,243 Created temporary directory: /tmp/pip-wheel-opb2lu87 2026-06-15T14:10:32,246 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-06-15T14:10:32,248 Created temporary directory: /tmp/pip-ephem-wheel-cache-47gd0k7w 2026-06-15T14:10:32,271 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-06-15T14:10:32,274 2 location(s) to search for versions of libsonata: 2026-06-15T14:10:32,274 * https://pypi.org/simple/libsonata/ 2026-06-15T14:10:32,274 * https://www.piwheels.org/simple/libsonata/ 2026-06-15T14:10:32,275 Fetching project page and analyzing links: https://pypi.org/simple/libsonata/ 2026-06-15T14:10:32,276 Getting page https://pypi.org/simple/libsonata/ 2026-06-15T14:10:32,277 Found index url https://pypi.org/simple 2026-06-15T14:10:32,697 Fetched page https://pypi.org/simple/libsonata/ as application/vnd.pypi.simple.v1+json 2026-06-15T14:10:32,794 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/cd/67/aa4bcce757109b4907ef6b11a376b82f235f4edcdb14ab1cd2fa9991b90b/libsonata-0.0.1-cp27-cp27m-manylinux1_i686.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,795 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/4b/ca/553800b92784776ebe64a5e41ddb0c08501548a3438ac16c1959c513ba3b/libsonata-0.0.1-cp27-cp27m-manylinux1_x86_64.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,795 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/ad/d7/05633e1f092a2e4e63535b12b4552fee3e1af52a9e59491b5ba85c7749a0/libsonata-0.0.1-cp27-cp27mu-manylinux1_i686.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,796 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/f5/3a/79ba20d58bcf93f32f07fb453a33f9e0073380f6232d6f34311c30a41378/libsonata-0.0.1-cp27-cp27mu-manylinux1_x86_64.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,797 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/f7/b1/b4950543f7d05072f41847d14cc5f78dd776762f58db172873c0663baab9/libsonata-0.0.1-cp34-cp34m-manylinux1_i686.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,798 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/65/2d/0abf53b76eb2c0a72f0c2ef76e4f4f39d4eff50a06615e40f5478feeb7b7/libsonata-0.0.1-cp34-cp34m-manylinux1_x86_64.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,798 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/de/35/24080427c500dcb19873c0c8878cc46dcba779986bc2cd48924e2b515227/libsonata-0.0.1-cp35-cp35m-manylinux1_i686.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,799 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/0c/df/011783c5cea47af8992e7a9bc087f49a6302704375032a717d7abc26501b/libsonata-0.0.1-cp35-cp35m-manylinux1_x86_64.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,799 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/a6/df/a64a0e515f1305832379ae4a023ec81c3e3f66e17be53d9bc8d40459458f/libsonata-0.0.1-cp36-cp36m-manylinux1_x86_64.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,800 Found link https://files.pythonhosted.org/packages/cc/15/f96f47d9e5853f26248d364771deece48ea437017df7cfdbbd88c7a0bc06/libsonata-0.0.1.tar.gz (from https://pypi.org/simple/libsonata/), version: 0.0.1 2026-06-15T14:10:32,801 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/54/9d/2efdb66e1830144e8d182173975ccb16e680db2665c41a25f8a5a6f2f485/libsonata-0.0.2-cp27-cp27m-manylinux1_i686.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,802 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/43/35/2a6035c56587c469f566f58934e9862e84f7f2b57abf29addfef0cd6b28b/libsonata-0.0.2-cp27-cp27m-manylinux1_x86_64.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,802 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/be/54/2101e715781231ac29891c966d8f264bc28a9adbefe3ee2a3722cb611279/libsonata-0.0.2-cp27-cp27mu-manylinux1_i686.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,802 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/31/9a/f730a6d76acb6cc3f63150e122b36d99e15689a9c3771fc2528219a68dfe/libsonata-0.0.2-cp27-cp27mu-manylinux1_x86_64.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,803 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/d4/23/1d9081d3919017a1b1503d826aa0f61b4e9b014eace32f8b2b698d6b6c83/libsonata-0.0.2-cp34-cp34m-manylinux1_i686.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,803 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/97/d3/60caa4e0a91ba53d3c686b4fb1681a6a6b9918a18c5123691fdfbc309ef1/libsonata-0.0.2-cp34-cp34m-manylinux1_x86_64.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,804 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/2f/a9/878ccdeff7b2fcda71d53b8225ab284f350e8594ed07f352bb06b51a55a9/libsonata-0.0.2-cp35-cp35m-manylinux1_i686.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,804 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/9f/5e/1eb1a2e1530121d256cde400f607fd93cc1ac8d3afc84aaaf67945210cf4/libsonata-0.0.2-cp35-cp35m-manylinux1_x86_64.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,805 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/aa/8e/1c4b7dcdc1fc9ef2e1af129ab8325cadee8905907857b345d3e7611caa7d/libsonata-0.0.2-cp36-cp36m-manylinux1_i686.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,806 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/ed/cb/6f09262c0f61e770bab0505f1799f65f2a1c1ba6239c7045d215fecd80cc/libsonata-0.0.2-cp36-cp36m-manylinux1_x86_64.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,806 Found link https://files.pythonhosted.org/packages/e6/85/09b8effcbb7da55d80afa4b60eb09fbf9eaa13bd03ba7590afb495d454de/libsonata-0.0.2.tar.gz (from https://pypi.org/simple/libsonata/), version: 0.0.2 2026-06-15T14:10:32,807 Skipping link: No binaries permitted for libsonata: 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https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,810 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/b6/02/3261964c678e2ed05b467963d7e48812fef22dd12eac95e3c3e3b7ccbc1d/libsonata-0.0.3-cp34-cp34m-manylinux1_i686.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,810 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/43/63/2b949a52a8a05a2d72e2567e257bdb510a6bcb8b27140a6c4d83f20e72ac/libsonata-0.0.3-cp34-cp34m-manylinux1_x86_64.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,811 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/03/9b/9676d8a49705be8e3b9aa35513128ec581b1a231418bdadb98cb80f34f7d/libsonata-0.0.3-cp35-cp35m-manylinux1_i686.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,811 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/20/ca/5bcd62c475eb0c40892bf494517ff1400793c43247f473e5f4a89b1e3ab2/libsonata-0.0.3-cp35-cp35m-manylinux1_x86_64.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,812 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/76/95/8d24395d8b4169a0379535c1494103b59a0dc889685bc17b2da11c9c048a/libsonata-0.0.3-cp36-cp36m-manylinux1_i686.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,812 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/a5/22/3a61e4853f3b52581c7833105c109f93707ff83f559e593259fadc7d0541/libsonata-0.0.3-cp36-cp36m-manylinux1_x86_64.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,813 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/08/a0/baa1e4ee480d7e3b1f548ff6062a2a6bb2e7e62ea0872e2cc514f6da4f52/libsonata-0.0.3-cp37-cp37m-manylinux1_i686.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,813 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/ef/6d/2df3b814ee1133587e954aa5e25bf80294c75b1250d5f2db68ab15c3313e/libsonata-0.0.3-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,814 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/b1/a8/0018356cee12f4bce0bf9e6a89da00c7207b34ba0278206e5b2d2d3988ab/libsonata-0.1.0-cp27-cp27m-manylinux1_i686.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,815 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/10/4c/08d1da604d4f870f1a880b3ba272cd053bbb21446b9fbc2b796ad592118f/libsonata-0.1.0-cp27-cp27m-manylinux1_x86_64.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,815 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/2e/b5/b5af8ffcf0f8abf3119f8a6aa84133a0ead70d2e0f69822892af05ac2376/libsonata-0.1.0-cp27-cp27mu-manylinux1_i686.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,816 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/8b/c0/2eb5dd03f008b08bab336f56c38811039c1af0a14e14e9d0736c0aec6575/libsonata-0.1.0-cp27-cp27mu-manylinux1_x86_64.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,817 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/6a/45/3e842fcd598173f40b593e56c1ca213c68f99bc1b3343666e6a22bf19b32/libsonata-0.1.0-cp36-cp36m-manylinux1_i686.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,817 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/72/e1/72dc9ac956101522c4f14ac4996214b032967c81d5635acf7ed7a017af30/libsonata-0.1.0-cp36-cp36m-manylinux1_x86_64.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,818 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/d0/58/f74c17d6f0fef9444fbe68958159b4810745052fdca33c0a9decc5e94593/libsonata-0.1.0-cp37-cp37m-manylinux1_i686.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,819 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/3e/82/f3da097e0619d333731b2c6adb4e955eede0aabdb08a93bfc3911bbdbc67/libsonata-0.1.0-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,819 Found link https://files.pythonhosted.org/packages/04/45/8cab82e154b64a54df0e89682e5e01522028f293f520a052a69a2353f6de/libsonata-0.1.0.tar.gz (from https://pypi.org/simple/libsonata/), version: 0.1.0 2026-06-15T14:10:32,820 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/58/39/578019ea77cd3fb183cbc03c258e3fae989566a7b6d51a03dbfb9e862db5/libsonata-0.1.1-cp27-cp27m-macosx_10_6_intel.macosx_10_9_intel.macosx_10_9_x86_64.macosx_10_10_intel.macosx_10_10_x86_64.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,820 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/2d/70/133b7eb7178a737837ecffd2f1460809ef975b486c2d023a0533a0f5b1f8/libsonata-0.1.1-cp27-cp27m-manylinux1_i686.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,821 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/c6/9c/5a318aae8b17902d5dfca5bcd9529f54769d03b57d565094e58792708fc9/libsonata-0.1.1-cp27-cp27m-manylinux1_x86_64.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,821 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/e1/b0/043cfff2a1f49decef048c966f09f143c0dc9f9f89593273ee2072487c0b/libsonata-0.1.1-cp27-cp27mu-manylinux1_i686.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,822 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/50/1b/2f1948687bda1d584f562a6c31586315e24f75a937518e7c42ade1e7707e/libsonata-0.1.1-cp27-cp27mu-manylinux1_x86_64.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,822 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/04/0a/1c456a113baa51867575c087d0bf9d81aba067619cba25ce8d30e244617e/libsonata-0.1.1-cp36-cp36m-macosx_10_6_intel.macosx_10_9_intel.macosx_10_9_x86_64.macosx_10_10_intel.macosx_10_10_x86_64.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,823 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/af/3e/43a56eb604c0f2f0cd885abfb636903e48fe36f4bbc30968e82d12521ac2/libsonata-0.1.1-cp36-cp36m-manylinux1_i686.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,824 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/98/59/3863aa3e0de1d5b8a5900ae51fb8a98bcadb3d8e05b40666b794e33ea344/libsonata-0.1.1-cp36-cp36m-manylinux1_x86_64.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,824 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/49/7c/0c4360b287cf8f2cee7fd97c472a962f36fdc167e71cadcfb9af6c33b803/libsonata-0.1.1-cp37-cp37m-macosx_10_6_intel.macosx_10_9_intel.macosx_10_9_x86_64.macosx_10_10_intel.macosx_10_10_x86_64.whl (from https://pypi.org/simple/libsonata/) 2026-06-15T14:10:32,825 Skipping link: No binaries permitted for libsonata: 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https://files.pythonhosted.org/packages/f0/8a/0635ef0b5c5516c5291885fe56192262a0cbba1bf1bfa28c4242421ffed0/libsonata-0.1.22-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/libsonata/) (requires-python:>=3.7) 2026-06-15T14:10:32,941 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/58/45/255e17e008d7955288282efe088d7b7abc78b69b6e21a9f845342bef0769/libsonata-0.1.22-cp38-cp38-macosx_10_13_x86_64.whl (from https://pypi.org/simple/libsonata/) (requires-python:>=3.7) 2026-06-15T14:10:32,941 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/1a/f5/d8e97239fe09955dc454c133c7a33507cc102d74bcec3bea00263a8ea1b8/libsonata-0.1.22-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/libsonata/) (requires-python:>=3.7) 2026-06-15T14:10:32,942 Skipping link: No binaries permitted for libsonata: 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https://files.pythonhosted.org/packages/31/d4/22135d14e633cb1bce197ec0e8ea2c6eed3ee824188ed911ef52b2e0140e/libsonata-0.1.37-cp311-cp311-manylinux_2_28_aarch64.whl (from https://pypi.org/simple/libsonata/) (requires-python:>=3.9) 2026-06-15T14:10:33,112 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/6b/54/19b850471801a813dd4d0699b67a66046945c80201f004b2a2b7b147a900/libsonata-0.1.37-cp311-cp311-manylinux_2_28_x86_64.whl (from https://pypi.org/simple/libsonata/) (requires-python:>=3.9) 2026-06-15T14:10:33,113 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/8f/4b/226599375d66e2d4324c21997740e72d5a1b07293c204c1a23d238a37c1c/libsonata-0.1.37-cp312-cp312-macosx_10_13_x86_64.whl (from https://pypi.org/simple/libsonata/) (requires-python:>=3.9) 2026-06-15T14:10:33,114 Skipping link: No binaries permitted for libsonata: 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https://files.pythonhosted.org/packages/6f/71/da0dca6c946eda6d4dc722326b5eaea26dbd632dc05764beabbb6e933d3a/libsonata-0.1.37-cp313-cp313-manylinux_2_28_x86_64.whl (from https://pypi.org/simple/libsonata/) (requires-python:>=3.9) 2026-06-15T14:10:33,117 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/df/46/090a3f7b506c19675688188fd0053b6d5753cb8ed5ce56764a2b0d114977/libsonata-0.1.37-cp314-cp314-macosx_10_15_x86_64.whl (from https://pypi.org/simple/libsonata/) (requires-python:>=3.9) 2026-06-15T14:10:33,118 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/a4/b1/413a1a0895437d54d9261bba44f2bd0278ca2f056c7041e5f13621866dd4/libsonata-0.1.37-cp314-cp314-macosx_11_0_arm64.whl (from https://pypi.org/simple/libsonata/) (requires-python:>=3.9) 2026-06-15T14:10:33,118 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/f8/a3/8d2bf5a932c29dc91a1ac5157c54d6f8c432c9a963d2edc450d823dd0aa7/libsonata-0.1.37-cp314-cp314-manylinux_2_28_aarch64.whl (from https://pypi.org/simple/libsonata/) (requires-python:>=3.9) 2026-06-15T14:10:33,119 Skipping link: No binaries permitted for libsonata: https://files.pythonhosted.org/packages/46/41/80b7bc253a7f919b53b1f01af0b568aed66106a17e129120d50794ede06b/libsonata-0.1.37-cp314-cp314-manylinux_2_28_x86_64.whl (from https://pypi.org/simple/libsonata/) (requires-python:>=3.9) 2026-06-15T14:10:33,120 Found link https://files.pythonhosted.org/packages/a3/73/aa8b3ebfaa6e8b4c600de783cb7aa7770afc802615ce8c9c2f06c7803d62/libsonata-0.1.37.tar.gz (from https://pypi.org/simple/libsonata/) (requires-python:>=3.9), version: 0.1.37 2026-06-15T14:10:33,121 Fetching project page and analyzing links: https://www.piwheels.org/simple/libsonata/ 2026-06-15T14:10:33,122 Getting page https://www.piwheels.org/simple/libsonata/ 2026-06-15T14:10:33,123 Found index url https://www.piwheels.org/simple 2026-06-15T14:10:33,412 Fetched page https://www.piwheels.org/simple/libsonata/ as text/html 2026-06-15T14:10:33,467 Skipping link: No binaries permitted for libsonata: https://archive1.piwheels.org/simple/libsonata/libsonata-0.1.36-cp311-cp311-linux_armv6l.whl#sha256=03083e3f78ecfc65ad02770ccbc388e59485f275bfe28cf245fe0e260061ca65 (from https://www.piwheels.org/simple/libsonata/) (requires-python:>=3.9) 2026-06-15T14:10:33,468 Skipping link: No binaries permitted for libsonata: https://archive1.piwheels.org/simple/libsonata/libsonata-0.1.36-cp311-cp311-linux_armv7l.whl#sha256=03083e3f78ecfc65ad02770ccbc388e59485f275bfe28cf245fe0e260061ca65 (from https://www.piwheels.org/simple/libsonata/) (requires-python:>=3.9) 2026-06-15T14:10:33,468 Skipping link: No binaries permitted for libsonata: 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https://archive1.piwheels.org/simple/libsonata/libsonata-0.0.2-cp35-cp35m-linux_armv7l.whl#sha256=203af13c796d6096151043c6656f50f8a26c9b5c634c4085c7b7ced33d0f6704 (from https://www.piwheels.org/simple/libsonata/) 2026-06-15T14:10:33,576 Skipping link: No binaries permitted for libsonata: https://archive1.piwheels.org/simple/libsonata/libsonata-0.0.2-cp35-cp35m-linux_armv6l.whl#sha256=203af13c796d6096151043c6656f50f8a26c9b5c634c4085c7b7ced33d0f6704 (from https://www.piwheels.org/simple/libsonata/) 2026-06-15T14:10:33,577 Skipping link: No binaries permitted for libsonata: https://archive1.piwheels.org/simple/libsonata/libsonata-0.0.2-cp39-cp39-linux_armv6l.whl#sha256=fc1cc822ef384ad0e88e2719699879097bab54387b9521dc81432910da5d74b6 (from https://www.piwheels.org/simple/libsonata/) 2026-06-15T14:10:33,577 Skipping link: No binaries permitted for libsonata: https://archive1.piwheels.org/simple/libsonata/libsonata-0.0.2-cp39-cp39-linux_armv7l.whl#sha256=fc1cc822ef384ad0e88e2719699879097bab54387b9521dc81432910da5d74b6 (from https://www.piwheels.org/simple/libsonata/) 2026-06-15T14:10:33,578 Skipping link: No binaries permitted for libsonata: https://archive1.piwheels.org/simple/libsonata/libsonata-0.0.2-cp37-cp37m-linux_armv6l.whl#sha256=925b4b49068389e9077eecce0764b703c81b3e7be3fad084659f089d2ac9fbd9 (from https://www.piwheels.org/simple/libsonata/) 2026-06-15T14:10:33,578 Skipping link: No binaries permitted for libsonata: https://archive1.piwheels.org/simple/libsonata/libsonata-0.0.2-cp37-cp37m-linux_armv7l.whl#sha256=925b4b49068389e9077eecce0764b703c81b3e7be3fad084659f089d2ac9fbd9 (from https://www.piwheels.org/simple/libsonata/) 2026-06-15T14:10:33,579 Skipping link: No binaries permitted for libsonata: https://archive1.piwheels.org/simple/libsonata/libsonata-0.0.2-cp34-cp34m-linux_armv7l.whl#sha256=61fc7e05cf8d7d8748546aa9b11044f17bdc5f029ca2fe78e54c36a689ae0b25 (from https://www.piwheels.org/simple/libsonata/) 2026-06-15T14:10:33,579 Skipping link: No binaries permitted for libsonata: https://archive1.piwheels.org/simple/libsonata/libsonata-0.0.2-cp34-cp34m-linux_armv6l.whl#sha256=61fc7e05cf8d7d8748546aa9b11044f17bdc5f029ca2fe78e54c36a689ae0b25 (from https://www.piwheels.org/simple/libsonata/) 2026-06-15T14:10:33,580 Skipping link: not a file: https://www.piwheels.org/simple/libsonata/ 2026-06-15T14:10:33,581 Skipping link: not a file: https://pypi.org/simple/libsonata/ 2026-06-15T14:10:33,604 Given no hashes to check 1 links for project 'libsonata': discarding no candidates 2026-06-15T14:10:33,622 Collecting libsonata==0.1.37 2026-06-15T14:10:33,624 Created temporary directory: /tmp/pip-unpack-yj7yec3e 2026-06-15T14:10:33,954 Downloading libsonata-0.1.37.tar.gz (1.2 MB) 2026-06-15T14:10:34,844 Added libsonata==0.1.37 from https://files.pythonhosted.org/packages/a3/73/aa8b3ebfaa6e8b4c600de783cb7aa7770afc802615ce8c9c2f06c7803d62/libsonata-0.1.37.tar.gz to build tracker '/tmp/pip-build-tracker-uhpg2pt7' 2026-06-15T14:10:34,851 Created temporary directory: /tmp/pip-build-env-ymq92e38 2026-06-15T14:10:34,855 Installing build dependencies: started 2026-06-15T14:10:34,857 Running command pip subprocess to install build dependencies 2026-06-15T14:10:35,994 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-06-15T14:10:36,448 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-06-15T14:10:36,470 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-06-15T14:10:38,044 Collecting cmake 2026-06-15T14:10:38,414 Using cached cmake-4.3.2-py3-none-manylinux_2_31_armv7l.whl (26.6 MB) 2026-06-15T14:10:39,562 Collecting oldest-supported-numpy 2026-06-15T14:10:39,563 Obtaining dependency information for oldest-supported-numpy from https://www.piwheels.org/simple/oldest-supported-numpy/oldest_supported_numpy-2023.12.21-py3-none-any.whl.metadata 2026-06-15T14:10:39,574 Downloading https://www.piwheels.org/simple/oldest-supported-numpy/oldest_supported_numpy-2023.12.21-py3-none-any.whl.metadata (9.9 kB) 2026-06-15T14:10:41,021 Collecting setuptools 2026-06-15T14:10:41,022 Obtaining dependency information for setuptools from https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl.metadata 2026-06-15T14:10:41,036 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl.metadata (6.5 kB) 2026-06-15T14:10:41,376 Collecting setuptools_scm 2026-06-15T14:10:41,377 Obtaining dependency information for setuptools_scm from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl.metadata 2026-06-15T14:10:41,392 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl.metadata (6.5 kB) 2026-06-15T14:10:41,401 Discarding https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl#sha256=600c37b3fea2bb517f59d76792adae856d0b5ce7735b186e4cde804375251321 (from https://www.piwheels.org/simple/setuptools-scm/) (requires-python:>=3.10): Requested setuptools_scm from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl#sha256=600c37b3fea2bb517f59d76792adae856d0b5ce7735b186e4cde804375251321 has inconsistent Name: expected 'setuptools_scm', but metadata has 'setuptools-scm' 2026-06-15T14:10:41,424 Using cached setuptools_scm-10.0.5-py3-none-any.whl (21 kB) 2026-06-15T14:10:41,655 Collecting wheel 2026-06-15T14:10:41,656 Obtaining dependency information for wheel from https://www.piwheels.org/simple/wheel/wheel-0.47.0-py3-none-any.whl.metadata 2026-06-15T14:10:41,669 Using cached https://www.piwheels.org/simple/wheel/wheel-0.47.0-py3-none-any.whl.metadata (2.3 kB) 2026-06-15T14:10:42,936 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/3a/be/650f9c091ef71cb01d735775d554e068752d3ff63d7943b26316dc401749/numpy-1.21.2.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2026-06-15T14:10:42,943 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/5f/d6/ad58ded26556eaeaa8c971e08b6466f17c4ac4d786cd3d800e26ce59cc01/numpy-1.21.3.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2026-06-15T14:10:42,951 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/fb/48/b0708ebd7718a8933f0d3937513ef8ef2f4f04529f1f66ca86d873043921/numpy-1.21.4.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2026-06-15T14:10:42,958 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/c2/a8/a924a09492bdfee8c2ec3094d0a13f2799800b4fdc9c890738aeeb12c72e/numpy-1.21.5.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2026-06-15T14:10:42,965 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/45/b7/de7b8e67f2232c26af57c205aaad29fe17754f793404f59c8a730c7a191a/numpy-1.21.6.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2026-06-15T14:10:43,429 Link requires a different Python (3.11.2 not in: '>=3.12'): https://files.pythonhosted.org/packages/d3/e1/f2fe8f6113a657a1da83b358b16755e528a602c6976a43724a88f42b482a/numpy-2.5.0rc1.tar.gz (from https://pypi.org/simple/numpy/) (requires-python:>=3.12) 2026-06-15T14:10:43,755 Collecting numpy==1.23.2 2026-06-15T14:10:43,756 Obtaining dependency information for numpy==1.23.2 from https://www.piwheels.org/simple/numpy/numpy-1.23.2-cp311-cp311-linux_armv7l.whl.metadata 2026-06-15T14:10:43,768 Downloading https://www.piwheels.org/simple/numpy/numpy-1.23.2-cp311-cp311-linux_armv7l.whl.metadata (2.2 kB) 2026-06-15T14:10:43,855 Collecting vcs-versioning>=1.0.0.dev0 2026-06-15T14:10:43,856 Obtaining dependency information for vcs-versioning>=1.0.0.dev0 from https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl.metadata 2026-06-15T14:10:43,871 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl.metadata (1.6 kB) 2026-06-15T14:10:44,055 Collecting packaging>=20 2026-06-15T14:10:44,056 Obtaining dependency information for packaging>=20 from https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata 2026-06-15T14:10:44,070 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata (3.5 kB) 2026-06-15T14:10:44,306 Downloading https://www.piwheels.org/simple/oldest-supported-numpy/oldest_supported_numpy-2023.12.21-py3-none-any.whl (4.9 kB) 2026-06-15T14:10:44,325 Downloading https://www.piwheels.org/simple/numpy/numpy-1.23.2-cp311-cp311-linux_armv7l.whl (12.4 MB) 2026-06-15T14:10:45,498 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 12.4/12.4 MB 9.9 MB/s eta 0:00:00 2026-06-15T14:10:45,651 Using cached https://www.piwheels.org/simple/wheel/wheel-0.47.0-py3-none-any.whl (32 kB) 2026-06-15T14:10:45,677 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB) 2026-06-15T14:10:45,700 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl (79 kB) 2026-06-15T14:10:45,790 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-06-15T14:10:45,822 Using cached https://www.piwheels.org/simple/oldest-supported-numpy/oldest_supported_numpy-2023.12.21-py3-none-any.whl (4.9 kB) 2026-06-15T14:10:46,770 Using cached https://www.piwheels.org/simple/numpy/numpy-1.23.2-cp311-cp311-linux_armv7l.whl (12.4 MB) 2026-06-15T14:10:47,131 Using cached https://www.piwheels.org/simple/wheel/wheel-0.47.0-py3-none-any.whl (32 kB) 2026-06-15T14:10:47,154 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB) 2026-06-15T14:10:47,181 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl (79 kB) 2026-06-15T14:10:47,289 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-06-15T14:10:50,327 Installing collected packages: setuptools, packaging, numpy, cmake, wheel, vcs-versioning, oldest-supported-numpy, setuptools_scm 2026-06-15T14:11:02,301 Creating /tmp/pip-build-env-ymq92e38/overlay/local/bin 2026-06-15T14:11:02,304 changing mode of /tmp/pip-build-env-ymq92e38/overlay/local/bin/f2py to 755 2026-06-15T14:11:02,306 changing mode of /tmp/pip-build-env-ymq92e38/overlay/local/bin/f2py3 to 755 2026-06-15T14:11:02,309 changing mode of /tmp/pip-build-env-ymq92e38/overlay/local/bin/f2py3.11 to 755 2026-06-15T14:11:09,956 changing mode of /tmp/pip-build-env-ymq92e38/overlay/local/bin/ccmake to 755 2026-06-15T14:11:09,958 changing mode of /tmp/pip-build-env-ymq92e38/overlay/local/bin/cmake to 755 2026-06-15T14:11:09,961 changing mode of /tmp/pip-build-env-ymq92e38/overlay/local/bin/cpack to 755 2026-06-15T14:11:09,963 changing mode of /tmp/pip-build-env-ymq92e38/overlay/local/bin/ctest to 755 2026-06-15T14:11:10,169 changing mode of /tmp/pip-build-env-ymq92e38/overlay/local/bin/wheel to 755 2026-06-15T14:11:10,483 changing mode of /tmp/pip-build-env-ymq92e38/overlay/local/bin/vcs-versioning to 755 2026-06-15T14:11:10,615 changing mode of /tmp/pip-build-env-ymq92e38/overlay/local/bin/setuptools-scm to 755 2026-06-15T14:11:10,680 ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts. 2026-06-15T14:11:10,681 scipy 1.17.1 requires numpy<2.7,>=1.26.4, but you have numpy 1.23.2 which is incompatible. 2026-06-15T14:11:10,681 Successfully installed cmake-4.3.2 numpy-1.23.2 oldest-supported-numpy-2023.12.21 packaging-26.2 setuptools-82.0.1 setuptools_scm-10.0.5 vcs-versioning-1.1.1 wheel-0.47.0 2026-06-15T14:11:11,153 Installing build dependencies: finished with status 'done' 2026-06-15T14:11:11,160 Getting requirements to build wheel: started 2026-06-15T14:11:11,161 Running command Getting requirements to build wheel 2026-06-15T14:11:11,905 running egg_info 2026-06-15T14:11:11,914 writing python/libsonata.egg-info/PKG-INFO 2026-06-15T14:11:11,918 writing dependency_links to python/libsonata.egg-info/dependency_links.txt 2026-06-15T14:11:11,920 writing requirements to python/libsonata.egg-info/requires.txt 2026-06-15T14:11:11,922 writing top-level names to python/libsonata.egg-info/top_level.txt 2026-06-15T14:11:11,965 /tmp/pip-build-env-ymq92e38/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-06-15T14:11:11,966 return get_active_overrides().subprocess_timeout 2026-06-15T14:11:11,973 listing git files failed - pretending there aren't any 2026-06-15T14:11:11,978 reading manifest file 'python/libsonata.egg-info/SOURCES.txt' 2026-06-15T14:11:12,031 reading manifest template 'MANIFEST.in' 2026-06-15T14:11:12,111 adding license file 'COPYING' 2026-06-15T14:11:12,112 adding license file 'COPYING.LESSER' 2026-06-15T14:11:12,112 adding license file 'AUTHORS.txt' 2026-06-15T14:11:12,124 writing manifest file 'python/libsonata.egg-info/SOURCES.txt' 2026-06-15T14:11:12,223 Getting requirements to build wheel: finished with status 'done' 2026-06-15T14:11:12,227 Created temporary directory: /tmp/pip-modern-metadata-mi16e8mu 2026-06-15T14:11:12,229 Preparing metadata (pyproject.toml): started 2026-06-15T14:11:12,230 Running command Preparing metadata (pyproject.toml) 2026-06-15T14:11:12,922 running dist_info 2026-06-15T14:11:12,938 creating /tmp/pip-modern-metadata-mi16e8mu/libsonata.egg-info 2026-06-15T14:11:12,939 writing /tmp/pip-modern-metadata-mi16e8mu/libsonata.egg-info/PKG-INFO 2026-06-15T14:11:12,943 writing dependency_links to /tmp/pip-modern-metadata-mi16e8mu/libsonata.egg-info/dependency_links.txt 2026-06-15T14:11:12,945 writing requirements to /tmp/pip-modern-metadata-mi16e8mu/libsonata.egg-info/requires.txt 2026-06-15T14:11:12,946 writing top-level names to /tmp/pip-modern-metadata-mi16e8mu/libsonata.egg-info/top_level.txt 2026-06-15T14:11:12,948 writing manifest file '/tmp/pip-modern-metadata-mi16e8mu/libsonata.egg-info/SOURCES.txt' 2026-06-15T14:11:12,987 /tmp/pip-build-env-ymq92e38/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-06-15T14:11:12,987 return get_active_overrides().subprocess_timeout 2026-06-15T14:11:12,993 listing git files failed - pretending there aren't any 2026-06-15T14:11:12,998 reading manifest file '/tmp/pip-modern-metadata-mi16e8mu/libsonata.egg-info/SOURCES.txt' 2026-06-15T14:11:13,000 reading manifest template 'MANIFEST.in' 2026-06-15T14:11:13,072 adding license file 'COPYING' 2026-06-15T14:11:13,072 adding license file 'COPYING.LESSER' 2026-06-15T14:11:13,073 adding license file 'AUTHORS.txt' 2026-06-15T14:11:13,080 writing manifest file '/tmp/pip-modern-metadata-mi16e8mu/libsonata.egg-info/SOURCES.txt' 2026-06-15T14:11:13,082 creating '/tmp/pip-modern-metadata-mi16e8mu/libsonata-0.1.37.dist-info' 2026-06-15T14:11:13,223 Preparing metadata (pyproject.toml): finished with status 'done' 2026-06-15T14:11:13,229 Source in /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3 has version 0.1.37, which satisfies requirement libsonata==0.1.37 from https://files.pythonhosted.org/packages/a3/73/aa8b3ebfaa6e8b4c600de783cb7aa7770afc802615ce8c9c2f06c7803d62/libsonata-0.1.37.tar.gz 2026-06-15T14:11:13,230 Removed libsonata==0.1.37 from https://files.pythonhosted.org/packages/a3/73/aa8b3ebfaa6e8b4c600de783cb7aa7770afc802615ce8c9c2f06c7803d62/libsonata-0.1.37.tar.gz from build tracker '/tmp/pip-build-tracker-uhpg2pt7' 2026-06-15T14:11:13,236 Created temporary directory: /tmp/pip-unpack-gaw_nk5b 2026-06-15T14:11:13,237 Building wheels for collected packages: libsonata 2026-06-15T14:11:13,241 Created temporary directory: /tmp/pip-wheel-bzm7s4ev 2026-06-15T14:11:13,242 Destination directory: /tmp/pip-wheel-bzm7s4ev 2026-06-15T14:11:13,244 Building wheel for libsonata (pyproject.toml): started 2026-06-15T14:11:13,245 Running command Building wheel for libsonata (pyproject.toml) 2026-06-15T14:11:13,918 running bdist_wheel 2026-06-15T14:11:13,942 running build 2026-06-15T14:11:13,942 running build_py 2026-06-15T14:11:13,944 creating build/lib.linux-armv7l-cpython-311/libsonata 2026-06-15T14:11:13,946 copying python/libsonata/__init__.py -> build/lib.linux-armv7l-cpython-311/libsonata 2026-06-15T14:11:13,950 running build_ext 2026-06-15T14:11:14,901 -- The C compiler identification is GNU 12.2.0 2026-06-15T14:11:15,297 -- The CXX compiler identification is GNU 12.2.0 2026-06-15T14:11:15,337 -- Detecting C compiler ABI info 2026-06-15T14:11:15,653 -- Detecting C compiler ABI info - done 2026-06-15T14:11:15,719 -- Check for working C compiler: /usr/bin/cc - skipped 2026-06-15T14:11:15,720 -- Detecting C compile features 2026-06-15T14:11:15,723 -- Detecting C compile features - done 2026-06-15T14:11:15,780 -- Detecting CXX compiler ABI info 2026-06-15T14:11:16,210 -- Detecting CXX compiler ABI info - done 2026-06-15T14:11:16,278 -- Check for working CXX compiler: /usr/bin/c++ - skipped 2026-06-15T14:11:16,280 -- Detecting CXX compile features 2026-06-15T14:11:16,283 -- Detecting CXX compile features - done 2026-06-15T14:11:17,515 -- Found HDF5: /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so;/usr/lib/arm-linux-gnueabihf/libcrypto.so;/usr/lib/arm-linux-gnueabihf/libcurl.so;/usr/lib/arm-linux-gnueabihf/libpthread.a;/usr/lib/arm-linux-gnueabihf/libsz.so;/usr/lib/arm-linux-gnueabihf/libz.so;/usr/lib/arm-linux-gnueabihf/libdl.a;/usr/lib/arm-linux-gnueabihf/libm.so (found version "1.10.8") 2026-06-15T14:11:17,539 -- {fmt} version: 11.0.2 2026-06-15T14:11:17,539 -- Build type: Release 2026-06-15T14:11:17,594 -- pybind11 v3.0.1 2026-06-15T14:11:18,434 -- Found Python: /usr/bin/python3 (found suitable version "3.11.2", minimum required is "3.8") found components: Interpreter Development.Module Development.Embed 2026-06-15T14:11:18,582 Using compatibility mode for Python, set PYBIND11_FINDPYTHON to NEW/OLD to silence this message 2026-06-15T14:11:18,587 -- Performing Test HAS_FLTO_AUTO 2026-06-15T14:11:19,141 -- Performing Test HAS_FLTO_AUTO - Success 2026-06-15T14:11:19,281 -- Found Python: /usr/bin/python3 (found version "3.11.2") found components: Interpreter Development.Module 2026-06-15T14:11:19,285 -- Configuring done (4.6s) 2026-06-15T14:11:19,473 -- Generating done (0.2s) 2026-06-15T14:11:19,480 -- Build files have been written to: /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/build/temp.linux-armv7l-cpython-311 2026-06-15T14:11:19,973 [ 11%] Building CXX object CMakeFiles/sonata_static.dir/src/compartment_sets.cpp.o 2026-06-15T14:11:19,974 [ 11%] Building CXX object CMakeFiles/sonata_static.dir/src/common.cpp.o 2026-06-15T14:11:19,975 [ 17%] Building CXX object CMakeFiles/sonata_static.dir/src/config.cpp.o 2026-06-15T14:11:19,982 [ 23%] Building CXX object CMakeFiles/sonata_static.dir/src/edge_index.cpp.o 2026-06-15T14:11:21,246 [ 29%] Building CXX object CMakeFiles/sonata_static.dir/src/edges.cpp.o 2026-06-15T14:11:30,780 In file included from /usr/include/c++/12/bits/stl_algo.h:60, 2026-06-15T14:11:30,781 from /usr/include/c++/12/algorithm:61, 2026-06-15T14:11:30,782 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/HighFive/include/highfive/bits/../bits/H5Utils.hpp:12, 2026-06-15T14:11:30,783 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/HighFive/include/highfive/bits/../H5DataType.hpp:17, 2026-06-15T14:11:30,784 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/HighFive/include/highfive/bits/../H5Attribute.hpp:15, 2026-06-15T14:11:30,784 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/HighFive/include/highfive/bits/H5Annotate_traits.hpp:13, 2026-06-15T14:11:30,785 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/HighFive/include/highfive/H5File.hpp:16, 2026-06-15T14:11:30,786 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/include/bbp/sonata/hdf5_reader.h:7, 2026-06-15T14:11:30,787 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/include/bbp/sonata/population.h:22, 2026-06-15T14:11:30,788 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/edge_index.h:12, 2026-06-15T14:11:30,789 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/edge_index.cpp:10: 2026-06-15T14:11:30,790 /usr/include/c++/12/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2026-06-15T14:11:30,791 /usr/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:11:30,792 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, 2026-06-15T14:11:30,794 | ^~~~~~~~~~~~~ 2026-06-15T14:11:30,830 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2026-06-15T14:11:30,831 /usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:11:30,832 1802 | __insertion_sort(_RandomAccessIterator __first, 2026-06-15T14:11:30,833 | ^~~~~~~~~~~~~~~~ 2026-06-15T14:11:30,834 /usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:11:30,912 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2026-06-15T14:11:30,913 /usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:11:30,914 1908 | __introsort_loop(_RandomAccessIterator __first, 2026-06-15T14:11:30,915 | ^~~~~~~~~~~~~~~~ 2026-06-15T14:11:30,916 /usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:11:30,917 /usr/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:11:30,918 1922 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); 2026-06-15T14:11:30,918 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:31,068 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: 2026-06-15T14:11:31,069 /usr/include/c++/12/bits/stl_algo.h:1782:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:31,070 1782 | __unguarded_linear_insert(_RandomAccessIterator __last, 2026-06-15T14:11:31,071 | ^~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:31,116 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2026-06-15T14:11:31,117 /usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:31,118 1802 | __insertion_sort(_RandomAccessIterator __first, 2026-06-15T14:11:31,119 | ^~~~~~~~~~~~~~~~ 2026-06-15T14:11:31,120 /usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:31,189 /usr/include/c++/12/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Distance = int; _Tp = array; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2026-06-15T14:11:31,190 /usr/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:31,191 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, 2026-06-15T14:11:31,192 | ^~~~~~~~~~~~~ 2026-06-15T14:11:31,895 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2026-06-15T14:11:31,896 /usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:31,897 1908 | __introsort_loop(_RandomAccessIterator __first, 2026-06-15T14:11:31,898 | ^~~~~~~~~~~~~~~~ 2026-06-15T14:11:31,899 /usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:31,900 /usr/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:31,901 1922 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); 2026-06-15T14:11:31,902 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:34,873 In file included from /usr/include/c++/12/vector:70, 2026-06-15T14:11:34,874 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/include/bbp/sonata/population.h:20: 2026-06-15T14:11:34,875 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const std::array&}; _Tp = std::array; _Alloc = std::allocator >]’: 2026-06-15T14:11:34,876 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2026-06-15T14:11:34,877 439 | vector<_Tp, _Alloc>:: 2026-06-15T14:11:34,878 | ^~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:35,016 In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, 2026-06-15T14:11:35,017 inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]’ at /usr/include/c++/12/bits/stl_algo.h:4820:18, 2026-06-15T14:11:35,018 inlined from ‘std::vector bbp::sonata::bulk_read::sortAndMerge(const std::vector&, size_t, size_t) [with Range = std::array]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/read_bulk.hpp:79:14: 2026-06-15T14:11:35,020 /usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:35,021 1937 | std::__introsort_loop(__first, __last, 2026-06-15T14:11:35,022 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 2026-06-15T14:11:35,023 1938 | std::__lg(__last - __first) * 2, 2026-06-15T14:11:35,024 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:35,025 1939 | __comp); 2026-06-15T14:11:35,026 | ~~~~~~~ 2026-06-15T14:11:35,027 In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, 2026-06-15T14:11:35,028 inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/12/bits/stl_algo.h:1940:31, 2026-06-15T14:11:35,029 inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]’ at /usr/include/c++/12/bits/stl_algo.h:4820:18, 2026-06-15T14:11:35,030 inlined from ‘std::vector bbp::sonata::bulk_read::sortAndMerge(const std::vector&, size_t, size_t) [with Range = std::array]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/read_bulk.hpp:79:14: 2026-06-15T14:11:35,031 /usr/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:35,032 1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); 2026-06-15T14:11:35,033 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:35,034 /usr/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:35,035 1854 | std::__insertion_sort(__first, __last, __comp); 2026-06-15T14:11:35,036 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:35,037 In file included from /usr/include/c++/12/vector:64: 2026-06-15T14:11:35,038 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = std::array; _Alloc = std::allocator >]’, 2026-06-15T14:11:35,039 inlined from ‘std::vector bbp::sonata::bulk_read::sortAndMerge(const std::vector&, size_t, size_t) [with Range = std::array]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/read_bulk.hpp:89:18: 2026-06-15T14:11:35,040 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:35,041 1287 | _M_realloc_insert(end(), __x); 2026-06-15T14:11:35,043 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-06-15T14:11:35,044 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = std::array; _Alloc = std::allocator >]’, 2026-06-15T14:11:35,045 inlined from ‘std::vector bbp::sonata::bulk_read::sortAndMerge(const std::vector&, size_t, size_t) [with Range = std::array]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/read_bulk.hpp:99:26: 2026-06-15T14:11:35,046 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:35,047 1287 | _M_realloc_insert(end(), __x); 2026-06-15T14:11:35,048 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-06-15T14:11:35,433 In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, 2026-06-15T14:11:35,437 inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ at /usr/include/c++/12/bits/stl_algo.h:4820:18, 2026-06-15T14:11:35,443 inlined from ‘bbp::sonata::Selection bbp::sonata::edge_index::resolve(const HighFive::Group&, const std::vector&, const bbp::sonata::Hdf5Reader&)’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/edge_index.cpp:68:14: 2026-06-15T14:11:35,445 /usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:11:35,446 1937 | std::__introsort_loop(__first, __last, 2026-06-15T14:11:35,447 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 2026-06-15T14:11:35,447 1938 | std::__lg(__last - __first) * 2, 2026-06-15T14:11:35,448 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:35,449 1939 | __comp); 2026-06-15T14:11:35,450 | ~~~~~~~ 2026-06-15T14:11:35,452 In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, 2026-06-15T14:11:35,453 inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/12/bits/stl_algo.h:1940:31, 2026-06-15T14:11:35,454 inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ at /usr/include/c++/12/bits/stl_algo.h:4820:18, 2026-06-15T14:11:35,455 inlined from ‘bbp::sonata::Selection bbp::sonata::edge_index::resolve(const HighFive::Group&, const std::vector&, const bbp::sonata::Hdf5Reader&)’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/edge_index.cpp:68:14: 2026-06-15T14:11:35,456 /usr/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:11:35,457 1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); 2026-06-15T14:11:35,458 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:35,459 /usr/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:11:35,460 1854 | std::__insertion_sort(__first, __last, __comp); 2026-06-15T14:11:35,461 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:35,897 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {std::array}; _Tp = std::array; _Alloc = std::allocator >]’: 2026-06-15T14:11:35,898 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2026-06-15T14:11:35,900 439 | vector<_Tp, _Alloc>:: 2026-06-15T14:11:35,901 | ^~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:36,345 In file included from /usr/include/c++/12/algorithm:61, 2026-06-15T14:11:36,346 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/HighFive/include/highfive/bits/../bits/H5Utils.hpp:12, 2026-06-15T14:11:36,348 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/HighFive/include/highfive/bits/../H5DataType.hpp:17, 2026-06-15T14:11:36,349 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/HighFive/include/highfive/bits/../H5Attribute.hpp:15, 2026-06-15T14:11:36,350 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/HighFive/include/highfive/bits/H5Annotate_traits.hpp:13, 2026-06-15T14:11:36,351 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/HighFive/include/highfive/H5File.hpp:16, 2026-06-15T14:11:36,352 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/include/bbp/sonata/hdf5_reader.h:7, 2026-06-15T14:11:36,353 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/include/bbp/sonata/population.h:22, 2026-06-15T14:11:36,354 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/edge_index.h:12, 2026-06-15T14:11:36,355 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/edges.cpp:10: 2026-06-15T14:11:36,356 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: 2026-06-15T14:11:36,357 /usr/include/c++/12/bits/stl_algo.h:1782:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:36,358 1782 | __unguarded_linear_insert(_RandomAccessIterator __last, 2026-06-15T14:11:36,359 | ^~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:36,504 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2026-06-15T14:11:36,506 /usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:36,507 1802 | __insertion_sort(_RandomAccessIterator __first, 2026-06-15T14:11:36,508 | ^~~~~~~~~~~~~~~~ 2026-06-15T14:11:36,509 /usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:36,583 In file included from /usr/include/c++/12/bits/stl_algo.h:60: 2026-06-15T14:11:36,584 /usr/include/c++/12/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Distance = int; _Tp = array; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2026-06-15T14:11:36,586 /usr/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:36,587 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, 2026-06-15T14:11:36,588 | ^~~~~~~~~~~~~ 2026-06-15T14:11:38,276 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::array}; _Tp = std::array; _Alloc = std::allocator >]’, 2026-06-15T14:11:38,278 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = std::array; _Alloc = std::allocator >]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2026-06-15T14:11:38,279 inlined from ‘std::unordered_map > > bbp::sonata::edge_index::{anonymous}::_groupNodeRanges(const std::vector&)’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/edge_index.cpp:104:41, 2026-06-15T14:11:38,280 inlined from ‘void bbp::sonata::edge_index::{anonymous}::_writeIndexGroup(const std::vector&, uint64_t, HighFive::Group&, const std::string&)’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/edge_index.cpp:137:49: 2026-06-15T14:11:38,281 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:38,282 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:11:38,282 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:38,283 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::array}; _Tp = std::array; _Alloc = std::allocator >]’, 2026-06-15T14:11:38,284 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = std::array; _Alloc = std::allocator >]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2026-06-15T14:11:38,286 inlined from ‘std::unordered_map > > bbp::sonata::edge_index::{anonymous}::_groupNodeRanges(const std::vector&)’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/edge_index.cpp:110:33, 2026-06-15T14:11:38,287 inlined from ‘void bbp::sonata::edge_index::{anonymous}::_writeIndexGroup(const std::vector&, uint64_t, HighFive::Group&, const std::string&)’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/edge_index.cpp:137:49: 2026-06-15T14:11:38,288 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:38,289 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:11:38,290 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:38,291 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::array}; _Tp = std::array; _Alloc = std::allocator >]’, 2026-06-15T14:11:38,292 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = std::array; _Alloc = std::allocator >]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2026-06-15T14:11:38,293 inlined from ‘void bbp::sonata::edge_index::{anonymous}::_writeIndexGroup(const std::vector&, uint64_t, HighFive::Group&, const std::string&)’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/edge_index.cpp:156:35: 2026-06-15T14:11:38,294 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:38,295 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:11:38,297 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:38,298 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::array}; _Tp = std::array; _Alloc = std::allocator >]’, 2026-06-15T14:11:38,299 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = std::array; _Alloc = std::allocator >]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2026-06-15T14:11:38,300 inlined from ‘void bbp::sonata::edge_index::{anonymous}::_writeIndexGroup(const std::vector&, uint64_t, HighFive::Group&, const std::string&)’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/edge_index.cpp:159:35: 2026-06-15T14:11:38,300 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:38,301 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:11:38,303 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:38,303 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::array}; _Tp = std::array; _Alloc = std::allocator >]’, 2026-06-15T14:11:38,305 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = std::array; _Alloc = std::allocator >]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2026-06-15T14:11:38,306 inlined from ‘std::back_insert_iterator<_Container>& std::back_insert_iterator<_Container>::operator=(typename _Container::value_type&&) [with _Container = std::vector >]’ at /usr/include/c++/12/bits/stl_iterator.h:743:22, 2026-06-15T14:11:38,308 inlined from ‘static _OI std::__copy_move::__copy_m(_II, _II, _OI) [with _II = std::array*; _OI = std::back_insert_iterator > >]’ at /usr/include/c++/12/bits/stl_algobase.h:405:18, 2026-06-15T14:11:38,309 inlined from ‘_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = true; _II = array*; _OI = back_insert_iterator > >]’ at /usr/include/c++/12/bits/stl_algobase.h:495:30, 2026-06-15T14:11:38,310 inlined from ‘_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = true; _II = array*; _OI = back_insert_iterator > >]’ at /usr/include/c++/12/bits/stl_algobase.h:522:42, 2026-06-15T14:11:38,311 inlined from ‘_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = true; _II = __gnu_cxx::__normal_iterator*, vector > >; _OI = back_insert_iterator > >]’ at /usr/include/c++/12/bits/stl_algobase.h:529:31, 2026-06-15T14:11:38,312 inlined from ‘_OI std::move(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator*, vector > >; _OI = back_insert_iterator > >]’ at /usr/include/c++/12/bits/stl_algobase.h:652:38, 2026-06-15T14:11:38,313 inlined from ‘void bbp::sonata::edge_index::{anonymous}::_writeIndexGroup(const std::vector&, uint64_t, HighFive::Group&, const std::string&)’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/edge_index.cpp:161:22: 2026-06-15T14:11:38,315 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:38,326 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:11:38,327 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:38,898 [ 35%] Building CXX object CMakeFiles/sonata_static.dir/src/hdf5_mutex.cpp.o 2026-06-15T14:11:40,622 [ 41%] Building CXX object CMakeFiles/sonata_static.dir/src/hdf5_reader.cpp.o 2026-06-15T14:11:42,057 In file included from /usr/include/c++/12/vector:70, 2026-06-15T14:11:42,058 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/include/bbp/sonata/population.h:20: 2026-06-15T14:11:42,059 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const std::array&}; _Tp = std::array; _Alloc = std::allocator >]’: 2026-06-15T14:11:42,060 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2026-06-15T14:11:42,061 439 | vector<_Tp, _Alloc>:: 2026-06-15T14:11:42,062 | ^~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:43,183 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]’: 2026-06-15T14:11:43,184 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2026-06-15T14:11:43,256 In file included from /usr/include/c++/12/vector:64: 2026-06-15T14:11:43,257 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’, 2026-06-15T14:11:43,259 inlined from ‘std::back_insert_iterator<_Container>& std::back_insert_iterator<_Container>::operator=(const typename _Container::value_type&) [with _Container = std::vector]’ at /usr/include/c++/12/bits/stl_iterator.h:735:22, 2026-06-15T14:11:43,260 inlined from ‘_OutputIterator std::__set_intersection(_InputIterator1, _InputIterator1, _InputIterator2, _InputIterator2, _OutputIterator, _Compare) [with _InputIterator1 = __gnu_cxx::__normal_iterator >; _InputIterator2 = __gnu_cxx::__normal_iterator >; _OutputIterator = back_insert_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/12/bits/stl_algo.h:5224:16, 2026-06-15T14:11:43,261 inlined from ‘_OIter std::set_intersection(_IIter1, _IIter1, _IIter2, _IIter2, _OIter) [with _IIter1 = __gnu_cxx::__normal_iterator >; _IIter2 = __gnu_cxx::__normal_iterator >; _OIter = back_insert_iterator >]’ at /usr/include/c++/12/bits/stl_algo.h:5274:48, 2026-06-15T14:11:43,262 inlined from ‘bbp::sonata::Selection bbp::sonata::EdgePopulation::connectingEdges(const std::vector&, const std::vector&) const’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/edges.cpp:99:21: 2026-06-15T14:11:43,264 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:11:43,265 1287 | _M_realloc_insert(end(), __x); 2026-06-15T14:11:43,266 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-06-15T14:11:44,660 In file included from /usr/include/c++/12/bits/stl_algo.h:60, 2026-06-15T14:11:44,661 from /usr/include/c++/12/algorithm:61, 2026-06-15T14:11:44,662 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/../extlib/filesystem.hpp:192, 2026-06-15T14:11:44,662 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/compartment_sets.cpp:1: 2026-06-15T14:11:44,663 /usr/include/c++/12/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2026-06-15T14:11:44,664 /usr/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:11:44,665 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, 2026-06-15T14:11:44,666 | ^~~~~~~~~~~~~ 2026-06-15T14:11:44,723 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2026-06-15T14:11:44,724 /usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:11:44,725 1802 | __insertion_sort(_RandomAccessIterator __first, 2026-06-15T14:11:44,726 | ^~~~~~~~~~~~~~~~ 2026-06-15T14:11:44,727 /usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:11:44,881 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2026-06-15T14:11:44,882 /usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:11:44,883 1908 | __introsort_loop(_RandomAccessIterator __first, 2026-06-15T14:11:44,885 | ^~~~~~~~~~~~~~~~ 2026-06-15T14:11:44,886 /usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:11:44,887 /usr/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:11:44,888 1922 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); 2026-06-15T14:11:44,889 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:49,092 In file included from /usr/include/c++/12/vector:70, 2026-06-15T14:11:49,093 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/../extlib/filesystem.hpp:207: 2026-06-15T14:11:49,094 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {bbp::sonata::CompartmentLocation}; _Tp = bbp::sonata::CompartmentLocation; _Alloc = std::allocator]’: 2026-06-15T14:11:49,095 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2026-06-15T14:11:49,096 439 | vector<_Tp, _Alloc>:: 2026-06-15T14:11:49,097 | ^~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:49,158 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]’: 2026-06-15T14:11:49,159 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2026-06-15T14:11:49,250 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const bbp::sonata::CompartmentLocation&}; _Tp = bbp::sonata::CompartmentLocation; _Alloc = std::allocator]’: 2026-06-15T14:11:49,251 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2026-06-15T14:11:49,382 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {const bbp::sonata::CompartmentLocation&}; _Tp = bbp::sonata::CompartmentLocation; _Alloc = std::allocator]’, 2026-06-15T14:11:49,383 inlined from ‘std::unique_ptr bbp::sonata::detail::CompartmentSet::filter(const bbp::sonata::Selection&) const’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/compartment_sets.cpp:255:38, 2026-06-15T14:11:49,384 inlined from ‘bbp::sonata::CompartmentSet bbp::sonata::CompartmentSet::filter(const bbp::sonata::Selection&) const’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/compartment_sets.cpp:481:40: 2026-06-15T14:11:49,385 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:11:49,386 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:11:49,387 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:50,533 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const std::array&}; _Tp = std::array; _Alloc = std::allocator >]’: 2026-06-15T14:11:50,534 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2026-06-15T14:11:50,535 439 | vector<_Tp, _Alloc>:: 2026-06-15T14:11:50,536 | ^~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:50,593 In file included from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/include/bbp/sonata/hdf5_reader.h:6, 2026-06-15T14:11:50,595 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/include/bbp/sonata/population.h:22, 2026-06-15T14:11:50,596 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/utils.h:18, 2026-06-15T14:11:50,597 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/compartment_sets.cpp:3: 2026-06-15T14:11:50,598 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/include/bbp/sonata/selection.h: In static member function ‘static bbp::sonata::Selection bbp::sonata::Selection::fromValues(Iterator, Iterator) [with Iterator = __gnu_cxx::__normal_iterator >]’: 2026-06-15T14:11:50,599 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/include/bbp/sonata/selection.h:65:11: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:11:50,600 65 | Selection Selection::fromValues(Iterator first, Iterator last) { 2026-06-15T14:11:50,601 | ^~~~~~~~~ 2026-06-15T14:11:50,602 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/include/bbp/sonata/selection.h:65:11: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:11:50,603 In file included from /usr/include/c++/12/vector:64: 2026-06-15T14:11:50,604 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = std::array; _Alloc = std::allocator >]’, 2026-06-15T14:11:50,605 inlined from ‘static bbp::sonata::Selection bbp::sonata::Selection::fromValues(Iterator, Iterator) [with Iterator = __gnu_cxx::__normal_iterator >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/include/bbp/sonata/selection.h:75:33: 2026-06-15T14:11:50,606 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:50,607 1287 | _M_realloc_insert(end(), __x); 2026-06-15T14:11:50,608 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-06-15T14:11:50,609 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = std::array; _Alloc = std::allocator >]’, 2026-06-15T14:11:50,610 inlined from ‘static bbp::sonata::Selection bbp::sonata::Selection::fromValues(Iterator, Iterator) [with Iterator = __gnu_cxx::__normal_iterator >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/include/bbp/sonata/selection.h:84:25: 2026-06-15T14:11:50,610 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:50,611 1287 | _M_realloc_insert(end(), __x); 2026-06-15T14:11:50,612 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-06-15T14:11:51,957 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2026-06-15T14:11:51,957 /usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:51,958 1908 | __introsort_loop(_RandomAccessIterator __first, 2026-06-15T14:11:51,960 | ^~~~~~~~~~~~~~~~ 2026-06-15T14:11:51,961 /usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:51,964 /usr/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:51,965 1922 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); 2026-06-15T14:11:51,966 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:52,177 In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, 2026-06-15T14:11:52,178 inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]’ at /usr/include/c++/12/bits/stl_algo.h:4820:18, 2026-06-15T14:11:52,179 inlined from ‘std::vector bbp::sonata::bulk_read::sortAndMerge(const std::vector&, size_t, size_t) [with Range = std::array]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/read_bulk.hpp:79:14: 2026-06-15T14:11:52,180 /usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:52,181 1937 | std::__introsort_loop(__first, __last, 2026-06-15T14:11:52,182 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 2026-06-15T14:11:52,183 1938 | std::__lg(__last - __first) * 2, 2026-06-15T14:11:52,184 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:52,185 1939 | __comp); 2026-06-15T14:11:52,186 | ~~~~~~~ 2026-06-15T14:11:52,187 In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, 2026-06-15T14:11:52,188 inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/12/bits/stl_algo.h:1940:31, 2026-06-15T14:11:52,189 inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]’ at /usr/include/c++/12/bits/stl_algo.h:4820:18, 2026-06-15T14:11:52,190 inlined from ‘std::vector bbp::sonata::bulk_read::sortAndMerge(const std::vector&, size_t, size_t) [with Range = std::array]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/read_bulk.hpp:79:14: 2026-06-15T14:11:52,191 /usr/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:52,192 1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); 2026-06-15T14:11:52,193 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:52,195 /usr/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:52,195 1854 | std::__insertion_sort(__first, __last, __comp); 2026-06-15T14:11:52,196 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:52,205 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = std::array; _Alloc = std::allocator >]’, 2026-06-15T14:11:52,206 inlined from ‘std::vector bbp::sonata::bulk_read::sortAndMerge(const std::vector&, size_t, size_t) [with Range = std::array]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/read_bulk.hpp:89:18: 2026-06-15T14:11:52,207 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:52,208 1287 | _M_realloc_insert(end(), __x); 2026-06-15T14:11:52,209 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-06-15T14:11:52,210 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = std::array; _Alloc = std::allocator >]’, 2026-06-15T14:11:52,211 inlined from ‘std::vector bbp::sonata::bulk_read::sortAndMerge(const std::vector&, size_t, size_t) [with Range = std::array]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/read_bulk.hpp:99:26: 2026-06-15T14:11:52,212 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:52,213 1287 | _M_realloc_insert(end(), __x); 2026-06-15T14:11:52,214 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-06-15T14:11:53,697 In file included from /usr/include/c++/12/set:60, 2026-06-15T14:11:53,698 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/utils.h:14: 2026-06-15T14:11:53,699 /usr/include/c++/12/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, nlohmann::basic_json<> >; _KeyOfValue = std::_Select1st, nlohmann::basic_json<> > >; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’: 2026-06-15T14:11:53,700 /usr/include/c++/12/bits/stl_tree.h:2209:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, nlohmann::basic_json<> >, std::_Select1st, nlohmann::basic_json<> > >, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’ changed in GCC 7.1 2026-06-15T14:11:53,701 2209 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2026-06-15T14:11:53,702 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:53,774 /usr/include/c++/12/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, nlohmann::basic_json<> >; _KeyOfValue = std::_Select1st, nlohmann::basic_json<> > >; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’: 2026-06-15T14:11:53,775 /usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, nlohmann::basic_json<> >, std::_Select1st, nlohmann::basic_json<> > >, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’ changed in GCC 7.1 2026-06-15T14:11:53,777 2457 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2026-06-15T14:11:53,778 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:53,837 In file included from /usr/include/c++/12/map:61, 2026-06-15T14:11:53,838 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:61, 2026-06-15T14:11:53,838 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/utils.h:19: 2026-06-15T14:11:53,839 /usr/include/c++/12/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = nlohmann::basic_json<>; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’: 2026-06-15T14:11:53,841 /usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, nlohmann::basic_json<> >, std::_Select1st, nlohmann::basic_json<> > >, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’ changed in GCC 7.1 2026-06-15T14:11:53,842 511 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2026-06-15T14:11:53,843 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:53,844 512 | std::tuple(__k), 2026-06-15T14:11:53,845 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:53,846 513 | std::tuple<>()); 2026-06-15T14:11:53,847 | ~~~~~~~~~~~~~~~ 2026-06-15T14:11:53,900 In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = nlohmann::basic_json<>; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’, 2026-06-15T14:11:53,901 inlined from ‘bool nlohmann::detail::json_sax_dom_callback_parser::key(string_t&) [with BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5599:76: 2026-06-15T14:11:53,903 /usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, nlohmann::basic_json<> >, std::_Select1st, nlohmann::basic_json<> > >, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’ changed in GCC 7.1 2026-06-15T14:11:53,904 511 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2026-06-15T14:11:53,906 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:53,907 512 | std::tuple(__k), 2026-06-15T14:11:53,908 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:53,909 513 | std::tuple<>()); 2026-06-15T14:11:53,910 | ~~~~~~~~~~~~~~~ 2026-06-15T14:11:55,654 In file included from /usr/include/c++/12/algorithm:61, 2026-06-15T14:11:55,655 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/HighFive/include/highfive/bits/../bits/H5Utils.hpp:12, 2026-06-15T14:11:55,656 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/HighFive/include/highfive/bits/../H5DataType.hpp:17, 2026-06-15T14:11:55,657 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/HighFive/include/highfive/bits/../H5Attribute.hpp:15, 2026-06-15T14:11:55,658 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/HighFive/include/highfive/bits/H5Annotate_traits.hpp:13, 2026-06-15T14:11:55,658 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/HighFive/include/highfive/H5File.hpp:16, 2026-06-15T14:11:55,659 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/include/bbp/sonata/hdf5_reader.h:7, 2026-06-15T14:11:55,660 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/hdf5_reader.cpp:1: 2026-06-15T14:11:55,661 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: 2026-06-15T14:11:55,662 /usr/include/c++/12/bits/stl_algo.h:1782:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:55,663 1782 | __unguarded_linear_insert(_RandomAccessIterator __last, 2026-06-15T14:11:55,664 | ^~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:55,702 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2026-06-15T14:11:55,702 /usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:55,703 1802 | __insertion_sort(_RandomAccessIterator __first, 2026-06-15T14:11:55,704 | ^~~~~~~~~~~~~~~~ 2026-06-15T14:11:55,705 /usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:55,769 In file included from /usr/include/c++/12/bits/stl_algo.h:60: 2026-06-15T14:11:55,770 /usr/include/c++/12/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Distance = int; _Tp = array; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2026-06-15T14:11:55,771 /usr/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:55,773 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, 2026-06-15T14:11:55,774 | ^~~~~~~~~~~~~ 2026-06-15T14:11:56,502 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2026-06-15T14:11:56,503 /usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:56,504 1908 | __introsort_loop(_RandomAccessIterator __first, 2026-06-15T14:11:56,504 | ^~~~~~~~~~~~~~~~ 2026-06-15T14:11:56,505 /usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:56,506 /usr/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:11:56,507 1922 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); 2026-06-15T14:11:56,508 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:59,136 [ 47%] Building CXX object CMakeFiles/sonata_static.dir/src/node_sets.cpp.o 2026-06-15T14:11:59,449 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’, 2026-06-15T14:11:59,450 inlined from ‘bbp::sonata::Selection bbp::sonata::detail::CompartmentSet::nodeIds() const’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/compartment_sets.cpp:218:33: 2026-06-15T14:11:59,451 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:11:59,452 1287 | _M_realloc_insert(end(), __x); 2026-06-15T14:11:59,453 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-06-15T14:11:59,454 In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, 2026-06-15T14:11:59,455 inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ at /usr/include/c++/12/bits/stl_algo.h:4820:18, 2026-06-15T14:11:59,456 inlined from ‘bbp::sonata::Selection bbp::sonata::detail::CompartmentSet::nodeIds() const’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/compartment_sets.cpp:221:13: 2026-06-15T14:11:59,457 /usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:11:59,458 1937 | std::__introsort_loop(__first, __last, 2026-06-15T14:11:59,460 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 2026-06-15T14:11:59,461 1938 | std::__lg(__last - __first) * 2, 2026-06-15T14:11:59,461 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:59,462 1939 | __comp); 2026-06-15T14:11:59,463 | ~~~~~~~ 2026-06-15T14:11:59,464 In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, 2026-06-15T14:11:59,465 inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/12/bits/stl_algo.h:1940:31, 2026-06-15T14:11:59,466 inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ at /usr/include/c++/12/bits/stl_algo.h:4820:18, 2026-06-15T14:11:59,466 inlined from ‘bbp::sonata::Selection bbp::sonata::detail::CompartmentSet::nodeIds() const’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/compartment_sets.cpp:221:13: 2026-06-15T14:11:59,467 /usr/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:11:59,468 1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); 2026-06-15T14:11:59,469 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:59,470 /usr/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:11:59,471 1854 | std::__insertion_sort(__first, __last, __comp); 2026-06-15T14:11:59,472 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:59,474 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/compartment_sets.cpp: In member function ‘bbp::sonata::Selection bbp::sonata::detail::CompartmentSet::nodeIds() const’: 2026-06-15T14:11:59,475 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/compartment_sets.cpp:222:66: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:11:59,476 222 | return Selection::fromValues(result.begin(), result.end()); 2026-06-15T14:11:59,478 | ^ 2026-06-15T14:11:59,584 /usr/include/c++/12/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’: 2026-06-15T14:11:59,585 /usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ changed in GCC 7.1 2026-06-15T14:11:59,586 175 | vector<_Tp, _Alloc>:: 2026-06-15T14:11:59,587 | ^~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:59,638 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’, 2026-06-15T14:11:59,639 inlined from ‘IteratorType nlohmann::basic_json::erase(IteratorType) [with IteratorType = nlohmann::detail::iter_impl >; typename std::enable_if<(std::is_same > >::value || std::is_same > >::value), int>::type = 0; ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer; BinaryType = std::vector >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:20568:66: 2026-06-15T14:11:59,640 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2026-06-15T14:11:59,642 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2026-06-15T14:11:59,642 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:59,836 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {nlohmann::detail::value_t}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’: 2026-06-15T14:11:59,837 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ changed in GCC 7.1 2026-06-15T14:11:59,838 439 | vector<_Tp, _Alloc>:: 2026-06-15T14:11:59,839 | ^~~~~~~~~~~~~~~~~~~ 2026-06-15T14:11:59,953 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {nlohmann::detail::value_t}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’, 2026-06-15T14:11:59,954 inlined from ‘BasicJsonType* nlohmann::detail::json_sax_dom_parser::handle_value(Value&&) [with Value = nlohmann::detail::value_t; BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5479:58, 2026-06-15T14:11:59,955 inlined from ‘bool nlohmann::detail::json_sax_dom_parser::start_array(std::size_t) [with BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5423:41: 2026-06-15T14:11:59,956 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2026-06-15T14:11:59,957 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:11:59,958 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:00,035 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {nlohmann::detail::value_t}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’, 2026-06-15T14:12:00,036 inlined from ‘BasicJsonType* nlohmann::detail::json_sax_dom_parser::handle_value(Value&&) [with Value = nlohmann::detail::value_t; BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5479:58, 2026-06-15T14:12:00,038 inlined from ‘bool nlohmann::detail::json_sax_dom_parser::start_object(std::size_t) [with BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5397:41: 2026-06-15T14:12:00,039 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2026-06-15T14:12:00,040 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:12:00,041 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:00,123 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >&}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’: 2026-06-15T14:12:00,124 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ changed in GCC 7.1 2026-06-15T14:12:00,125 439 | vector<_Tp, _Alloc>:: 2026-06-15T14:12:00,126 | ^~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:00,516 In file included from /usr/include/c++/12/vector:70, 2026-06-15T14:12:00,517 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/include/bbp/sonata/hdf5_reader.h:4: 2026-06-15T14:12:00,518 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const std::array&}; _Tp = std::array; _Alloc = std::allocator >]’: 2026-06-15T14:12:00,519 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2026-06-15T14:12:00,520 439 | vector<_Tp, _Alloc>:: 2026-06-15T14:12:00,521 | ^~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:00,652 In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, 2026-06-15T14:12:00,653 inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]’ at /usr/include/c++/12/bits/stl_algo.h:4820:18, 2026-06-15T14:12:00,654 inlined from ‘std::vector bbp::sonata::bulk_read::sortAndMerge(const std::vector&, size_t, size_t) [with Range = std::array]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/read_bulk.hpp:79:14: 2026-06-15T14:12:00,655 /usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:12:00,656 1937 | std::__introsort_loop(__first, __last, 2026-06-15T14:12:00,657 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 2026-06-15T14:12:00,658 1938 | std::__lg(__last - __first) * 2, 2026-06-15T14:12:00,659 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:00,661 1939 | __comp); 2026-06-15T14:12:00,662 | ~~~~~~~ 2026-06-15T14:12:00,663 In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, 2026-06-15T14:12:00,664 inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/12/bits/stl_algo.h:1940:31, 2026-06-15T14:12:00,665 inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]’ at /usr/include/c++/12/bits/stl_algo.h:4820:18, 2026-06-15T14:12:00,666 inlined from ‘std::vector bbp::sonata::bulk_read::sortAndMerge(const std::vector&, size_t, size_t) [with Range = std::array]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/read_bulk.hpp:79:14: 2026-06-15T14:12:00,667 /usr/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:12:00,668 1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); 2026-06-15T14:12:00,669 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:00,669 /usr/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:12:00,671 1854 | std::__insertion_sort(__first, __last, __comp); 2026-06-15T14:12:00,672 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:00,673 In file included from /usr/include/c++/12/vector:64: 2026-06-15T14:12:00,674 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = std::array; _Alloc = std::allocator >]’, 2026-06-15T14:12:00,675 inlined from ‘std::vector bbp::sonata::bulk_read::sortAndMerge(const std::vector&, size_t, size_t) [with Range = std::array]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/read_bulk.hpp:89:18: 2026-06-15T14:12:00,676 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:12:00,677 1287 | _M_realloc_insert(end(), __x); 2026-06-15T14:12:00,678 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-06-15T14:12:00,679 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = std::array; _Alloc = std::allocator >]’, 2026-06-15T14:12:00,696 inlined from ‘std::vector bbp::sonata::bulk_read::sortAndMerge(const std::vector&, size_t, size_t) [with Range = std::array]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/read_bulk.hpp:99:26: 2026-06-15T14:12:00,697 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:12:00,698 1287 | _M_realloc_insert(end(), __x); 2026-06-15T14:12:00,699 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-06-15T14:12:12,079 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {bbp::sonata::CompartmentLocation}; _Tp = bbp::sonata::CompartmentLocation; _Alloc = std::allocator]’, 2026-06-15T14:12:12,079 inlined from ‘bbp::sonata::detail::CompartmentSet::CompartmentSet(const nlohmann::json&)’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/compartment_sets.cpp:154:48: 2026-06-15T14:12:12,080 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:12:12,081 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:12:12,082 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:15,210 [ 52%] Building CXX object CMakeFiles/sonata_static.dir/src/nodes.cpp.o 2026-06-15T14:12:16,399 In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = nlohmann::basic_json<>; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’, 2026-06-15T14:12:16,401 inlined from ‘nlohmann::basic_json::value_type& nlohmann::basic_json::operator[](const typename object_t::key_type&) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer; BinaryType = std::vector >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:20085:46, 2026-06-15T14:12:16,402 inlined from ‘nlohmann::json bbp::sonata::detail::CompartmentSets::to_json() const’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/compartment_sets.cpp:350:26, 2026-06-15T14:12:16,403 inlined from ‘std::string bbp::sonata::CompartmentSets::toJSON() const’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/compartment_sets.cpp:564:26: 2026-06-15T14:12:16,404 /usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, nlohmann::basic_json<> >, std::_Select1st, nlohmann::basic_json<> > >, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’ changed in GCC 7.1 2026-06-15T14:12:16,405 511 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2026-06-15T14:12:16,406 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:16,407 512 | std::tuple(__k), 2026-06-15T14:12:16,408 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:16,409 513 | std::tuple<>()); 2026-06-15T14:12:16,410 | ~~~~~~~~~~~~~~~ 2026-06-15T14:12:16,412 /usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, nlohmann::basic_json<> >, std::_Select1st, nlohmann::basic_json<> > >, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’ changed in GCC 7.1 2026-06-15T14:12:17,681 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >&}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’, 2026-06-15T14:12:17,683 inlined from ‘BasicJsonType* nlohmann::detail::json_sax_dom_parser::handle_value(Value&&) [with Value = std::__cxx11::basic_string&; BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5479:58, 2026-06-15T14:12:17,683 inlined from ‘bool nlohmann::detail::json_sax_dom_parser::string(string_t&) [with BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5385:21, 2026-06-15T14:12:17,684 inlined from ‘bool nlohmann::detail::parser::sax_parse_internal(SAX*) [with SAX = nlohmann::detail::json_sax_dom_parser >; BasicJsonType = nlohmann::basic_json<>; InputAdapterType = nlohmann::detail::iterator_input_adapter<__gnu_cxx::__normal_iterator > >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:10428:29: 2026-06-15T14:12:17,685 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2026-06-15T14:12:17,686 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:12:17,687 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:20,489 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >&}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’, 2026-06-15T14:12:20,490 inlined from ‘BasicJsonType* nlohmann::detail::json_sax_dom_parser::handle_value(Value&&) [with Value = std::__cxx11::basic_string&; BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5479:58, 2026-06-15T14:12:20,492 inlined from ‘bool nlohmann::detail::json_sax_dom_parser::string(string_t&) [with BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5385:21, 2026-06-15T14:12:20,493 inlined from ‘bool nlohmann::detail::parser::sax_parse_internal(SAX*) [with SAX = nlohmann::detail::json_sax_dom_parser >; BasicJsonType = nlohmann::basic_json<>; InputAdapterType = nlohmann::detail::input_stream_adapter]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:10428:29: 2026-06-15T14:12:20,494 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2026-06-15T14:12:20,495 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:12:20,496 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:22,174 [ 58%] Building CXX object CMakeFiles/sonata_static.dir/src/population.cpp.o 2026-06-15T14:12:22,264 In file included from /usr/include/c++/12/vector:70, 2026-06-15T14:12:22,265 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/include/bbp/sonata/config.h:17, 2026-06-15T14:12:22,266 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/config.cpp:12: 2026-06-15T14:12:22,267 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {bbp::sonata::SimulationConfig::EField}; _Tp = bbp::sonata::SimulationConfig::EField; _Alloc = std::allocator]’: 2026-06-15T14:12:22,267 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2026-06-15T14:12:22,268 439 | vector<_Tp, _Alloc>:: 2026-06-15T14:12:22,269 | ^~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:24,504 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {bbp::sonata::SimulationConfig::ConnectionOverride}; _Tp = bbp::sonata::SimulationConfig::ConnectionOverride; _Alloc = std::allocator]’: 2026-06-15T14:12:24,505 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2026-06-15T14:12:33,674 In file included from /usr/include/c++/12/vector:70, 2026-06-15T14:12:33,674 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/../extlib/filesystem.hpp:207, 2026-06-15T14:12:33,675 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/node_sets.cpp:8: 2026-06-15T14:12:33,676 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {long long int}; _Tp = long long int; _Alloc = std::allocator]’: 2026-06-15T14:12:33,677 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2026-06-15T14:12:33,678 439 | vector<_Tp, _Alloc>:: 2026-06-15T14:12:33,679 | ^~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:35,431 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const std::array&}; _Tp = std::array; _Alloc = std::allocator >]’: 2026-06-15T14:12:35,432 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2026-06-15T14:12:35,490 In file included from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/include/bbp/sonata/hdf5_reader.h:6, 2026-06-15T14:12:35,491 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/include/bbp/sonata/population.h:22, 2026-06-15T14:12:35,492 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/utils.h:18, 2026-06-15T14:12:35,493 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/node_sets.cpp:13: 2026-06-15T14:12:35,494 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/include/bbp/sonata/selection.h: In static member function ‘static bbp::sonata::Selection bbp::sonata::Selection::fromValues(Iterator, Iterator) [with Iterator = __gnu_cxx::__normal_iterator >]’: 2026-06-15T14:12:35,495 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/include/bbp/sonata/selection.h:65:11: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:12:35,497 65 | Selection Selection::fromValues(Iterator first, Iterator last) { 2026-06-15T14:12:35,498 | ^~~~~~~~~ 2026-06-15T14:12:35,499 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/include/bbp/sonata/selection.h:65:11: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:12:35,501 In file included from /usr/include/c++/12/vector:64: 2026-06-15T14:12:35,502 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = std::array; _Alloc = std::allocator >]’, 2026-06-15T14:12:35,503 inlined from ‘static bbp::sonata::Selection bbp::sonata::Selection::fromValues(Iterator, Iterator) [with Iterator = __gnu_cxx::__normal_iterator >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/include/bbp/sonata/selection.h:75:33: 2026-06-15T14:12:35,504 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:12:35,505 1287 | _M_realloc_insert(end(), __x); 2026-06-15T14:12:35,506 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-06-15T14:12:35,507 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = std::array; _Alloc = std::allocator >]’, 2026-06-15T14:12:35,508 inlined from ‘static bbp::sonata::Selection bbp::sonata::Selection::fromValues(Iterator, Iterator) [with Iterator = __gnu_cxx::__normal_iterator >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/include/bbp/sonata/selection.h:84:25: 2026-06-15T14:12:35,509 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:12:35,510 1287 | _M_realloc_insert(end(), __x); 2026-06-15T14:12:35,511 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-06-15T14:12:35,561 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/node_sets.cpp: In member function ‘virtual bbp::sonata::Selection bbp::sonata::detail::NodeSetBasicNodeIds::materialize(const bbp::sonata::detail::NodeSets&, const bbp::sonata::NodePopulation&) const’: 2026-06-15T14:12:35,562 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/node_sets.cpp:235:54: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:12:35,563 235 | return np.selectAll() & Selection::fromValues(values_.begin(), values_.end()); 2026-06-15T14:12:35,564 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:39,382 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator]’: 2026-06-15T14:12:39,384 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2026-06-15T14:12:39,385 439 | vector<_Tp, _Alloc>:: 2026-06-15T14:12:39,386 | ^~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:41,880 /usr/include/c++/12/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’: 2026-06-15T14:12:41,881 /usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ changed in GCC 7.1 2026-06-15T14:12:41,882 175 | vector<_Tp, _Alloc>:: 2026-06-15T14:12:41,883 | ^~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:41,937 In file included from /usr/include/c++/12/vector:64: 2026-06-15T14:12:41,938 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’, 2026-06-15T14:12:41,939 inlined from ‘IteratorType nlohmann::basic_json::erase(IteratorType) [with IteratorType = nlohmann::detail::iter_impl >; typename std::enable_if<(std::is_same > >::value || std::is_same > >::value), int>::type = 0; ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer; BinaryType = std::vector >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:20568:66: 2026-06-15T14:12:41,941 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2026-06-15T14:12:41,942 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2026-06-15T14:12:41,943 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:42,126 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {nlohmann::detail::value_t}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’: 2026-06-15T14:12:42,127 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ changed in GCC 7.1 2026-06-15T14:12:42,128 439 | vector<_Tp, _Alloc>:: 2026-06-15T14:12:42,129 | ^~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:42,229 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {long long int&}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’: 2026-06-15T14:12:42,230 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ changed in GCC 7.1 2026-06-15T14:12:42,277 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >&}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’: 2026-06-15T14:12:42,278 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ changed in GCC 7.1 2026-06-15T14:12:42,331 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {long long unsigned int&}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’: 2026-06-15T14:12:42,333 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ changed in GCC 7.1 2026-06-15T14:12:44,516 In file included from /usr/include/c++/12/bits/stl_algo.h:60, 2026-06-15T14:12:44,517 from /usr/include/c++/12/algorithm:61, 2026-06-15T14:12:44,518 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/HighFive/include/highfive/bits/../bits/H5Utils.hpp:12, 2026-06-15T14:12:44,518 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/HighFive/include/highfive/bits/../H5DataType.hpp:17, 2026-06-15T14:12:44,519 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/HighFive/include/highfive/bits/../H5Attribute.hpp:15, 2026-06-15T14:12:44,520 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/HighFive/include/highfive/bits/H5Annotate_traits.hpp:13, 2026-06-15T14:12:44,521 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/HighFive/include/highfive/H5File.hpp:16, 2026-06-15T14:12:44,522 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/include/bbp/sonata/hdf5_reader.h:7, 2026-06-15T14:12:44,523 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/include/bbp/sonata/population.h:22, 2026-06-15T14:12:44,524 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/population.hpp:14, 2026-06-15T14:12:44,525 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/nodes.cpp:10: 2026-06-15T14:12:44,526 /usr/include/c++/12/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2026-06-15T14:12:44,527 /usr/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:12:44,528 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, 2026-06-15T14:12:44,529 | ^~~~~~~~~~~~~ 2026-06-15T14:12:44,568 /usr/include/c++/12/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Distance = int; _Tp = long long int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2026-06-15T14:12:44,569 /usr/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2026-06-15T14:12:44,849 In file included from /usr/include/c++/12/set:60, 2026-06-15T14:12:44,850 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/include/bbp/sonata/config.h:14: 2026-06-15T14:12:44,851 /usr/include/c++/12/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, nlohmann::basic_json<> >; _KeyOfValue = std::_Select1st, nlohmann::basic_json<> > >; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’: 2026-06-15T14:12:44,853 /usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, nlohmann::basic_json<> >, std::_Select1st, nlohmann::basic_json<> > >, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’ changed in GCC 7.1 2026-06-15T14:12:44,853 2457 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2026-06-15T14:12:44,854 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:44,931 In file included from /usr/include/c++/12/regex:54, 2026-06-15T14:12:44,932 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/config.cpp:15: 2026-06-15T14:12:44,933 /usr/include/c++/12/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = nlohmann::basic_json<>; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’: 2026-06-15T14:12:44,934 /usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, nlohmann::basic_json<> >, std::_Select1st, nlohmann::basic_json<> > >, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’ changed in GCC 7.1 2026-06-15T14:12:44,935 511 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2026-06-15T14:12:44,936 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:44,937 512 | std::tuple(__k), 2026-06-15T14:12:44,938 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:44,939 513 | std::tuple<>()); 2026-06-15T14:12:44,940 | ~~~~~~~~~~~~~~~ 2026-06-15T14:12:44,972 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2026-06-15T14:12:44,973 /usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:12:44,974 1802 | __insertion_sort(_RandomAccessIterator __first, 2026-06-15T14:12:44,975 | ^~~~~~~~~~~~~~~~ 2026-06-15T14:12:44,977 /usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:12:44,993 In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = nlohmann::basic_json<>; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’, 2026-06-15T14:12:44,994 inlined from ‘nlohmann::basic_json::value_type& nlohmann::basic_json::operator[](const typename object_t::key_type&) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer; BinaryType = std::vector >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:20085:46: 2026-06-15T14:12:44,995 /usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, nlohmann::basic_json<> >, std::_Select1st, nlohmann::basic_json<> > >, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’ changed in GCC 7.1 2026-06-15T14:12:44,996 511 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2026-06-15T14:12:44,997 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:44,998 512 | std::tuple(__k), 2026-06-15T14:12:44,999 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:45,000 513 | std::tuple<>()); 2026-06-15T14:12:45,001 | ~~~~~~~~~~~~~~~ 2026-06-15T14:12:45,007 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2026-06-15T14:12:45,008 /usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2026-06-15T14:12:45,009 /usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2026-06-15T14:12:45,354 In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = nlohmann::basic_json<>; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’, 2026-06-15T14:12:45,355 inlined from ‘bool nlohmann::detail::json_sax_dom_callback_parser::key(string_t&) [with BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5599:76: 2026-06-15T14:12:45,356 /usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, nlohmann::basic_json<> >, std::_Select1st, nlohmann::basic_json<> > >, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’ changed in GCC 7.1 2026-06-15T14:12:45,357 511 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2026-06-15T14:12:45,358 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:45,359 512 | std::tuple(__k), 2026-06-15T14:12:45,360 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:45,361 513 | std::tuple<>()); 2026-06-15T14:12:45,361 | ~~~~~~~~~~~~~~~ 2026-06-15T14:12:45,674 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2026-06-15T14:12:45,675 /usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2026-06-15T14:12:45,676 1908 | __introsort_loop(_RandomAccessIterator __first, 2026-06-15T14:12:45,677 | ^~~~~~~~~~~~~~~~ 2026-06-15T14:12:45,678 /usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2026-06-15T14:12:45,679 /usr/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2026-06-15T14:12:45,680 1922 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); 2026-06-15T14:12:45,680 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:45,699 /usr/include/c++/12/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = nlohmann::basic_json; _Alloc = std::allocator >]’: 2026-06-15T14:12:45,700 /usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ changed in GCC 7.1 2026-06-15T14:12:45,701 175 | vector<_Tp, _Alloc>:: 2026-06-15T14:12:45,702 | ^~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:45,766 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = nlohmann::basic_json; _Alloc = std::allocator >]’, 2026-06-15T14:12:45,767 inlined from ‘IteratorType nlohmann::basic_json::erase(IteratorType) [with IteratorType = nlohmann::detail::iter_impl >; typename std::enable_if<(std::is_same > >::value || std::is_same > >::value), int>::type = 0; ObjectType = nlohmann::ordered_map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer; BinaryType = std::vector >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:20568:66: 2026-06-15T14:12:45,768 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2026-06-15T14:12:45,769 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2026-06-15T14:12:45,770 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:45,771 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2026-06-15T14:12:45,772 /usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:12:45,773 1908 | __introsort_loop(_RandomAccessIterator __first, 2026-06-15T14:12:45,773 | ^~~~~~~~~~~~~~~~ 2026-06-15T14:12:45,774 /usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:12:45,775 /usr/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:12:45,776 1922 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); 2026-06-15T14:12:45,777 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:45,953 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {nlohmann::detail::value_t}; _Tp = nlohmann::basic_json; _Alloc = std::allocator >]’: 2026-06-15T14:12:45,954 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ changed in GCC 7.1 2026-06-15T14:12:45,955 439 | vector<_Tp, _Alloc>:: 2026-06-15T14:12:45,956 | ^~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:46,044 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {long long int&}; _Tp = nlohmann::basic_json; _Alloc = std::allocator >]’: 2026-06-15T14:12:46,045 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ changed in GCC 7.1 2026-06-15T14:12:46,087 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >&}; _Tp = nlohmann::basic_json; _Alloc = std::allocator >]’: 2026-06-15T14:12:46,088 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ changed in GCC 7.1 2026-06-15T14:12:46,136 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {long long unsigned int&}; _Tp = nlohmann::basic_json; _Alloc = std::allocator >]’: 2026-06-15T14:12:46,137 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ changed in GCC 7.1 2026-06-15T14:12:46,979 /usr/include/c++/12/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’: 2026-06-15T14:12:46,980 /usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ changed in GCC 7.1 2026-06-15T14:12:46,981 175 | vector<_Tp, _Alloc>:: 2026-06-15T14:12:46,982 | ^~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:46,991 In file included from /usr/include/c++/12/algorithm:61, 2026-06-15T14:12:46,992 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/population.cpp:10: 2026-06-15T14:12:46,993 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: 2026-06-15T14:12:46,994 /usr/include/c++/12/bits/stl_algo.h:1782:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:12:46,995 1782 | __unguarded_linear_insert(_RandomAccessIterator __last, 2026-06-15T14:12:46,996 | ^~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:47,039 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’, 2026-06-15T14:12:47,041 inlined from ‘IteratorType nlohmann::basic_json::erase(IteratorType) [with IteratorType = nlohmann::detail::iter_impl >; typename std::enable_if<(std::is_same > >::value || std::is_same > >::value), int>::type = 0; ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer; BinaryType = std::vector]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:20568:66: 2026-06-15T14:12:47,042 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2026-06-15T14:12:47,043 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2026-06-15T14:12:47,044 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:47,218 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {nlohmann::detail::value_t}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’: 2026-06-15T14:12:47,219 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ changed in GCC 7.1 2026-06-15T14:12:47,220 439 | vector<_Tp, _Alloc>:: 2026-06-15T14:12:47,220 | ^~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:47,319 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {nlohmann::detail::value_t}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’, 2026-06-15T14:12:47,320 inlined from ‘BasicJsonType* nlohmann::detail::json_sax_dom_parser::handle_value(Value&&) [with Value = nlohmann::detail::value_t; BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5479:58, 2026-06-15T14:12:47,320 inlined from ‘bool nlohmann::detail::json_sax_dom_parser::start_object(std::size_t) [with BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5397:41: 2026-06-15T14:12:47,321 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2026-06-15T14:12:47,322 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:12:47,323 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:47,402 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {nlohmann::detail::value_t}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’, 2026-06-15T14:12:47,403 inlined from ‘BasicJsonType* nlohmann::detail::json_sax_dom_parser::handle_value(Value&&) [with Value = nlohmann::detail::value_t; BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5479:58, 2026-06-15T14:12:47,404 inlined from ‘bool nlohmann::detail::json_sax_dom_parser::start_array(std::size_t) [with BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5423:41: 2026-06-15T14:12:47,405 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2026-06-15T14:12:47,406 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:12:47,407 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:47,480 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >&}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’: 2026-06-15T14:12:47,481 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ changed in GCC 7.1 2026-06-15T14:12:47,483 439 | vector<_Tp, _Alloc>:: 2026-06-15T14:12:47,484 | ^~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:47,533 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >&}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’, 2026-06-15T14:12:47,534 inlined from ‘BasicJsonType* nlohmann::detail::json_sax_dom_parser::handle_value(Value&&) [with Value = std::__cxx11::basic_string&; BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5479:58: 2026-06-15T14:12:47,535 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2026-06-15T14:12:47,535 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:12:47,536 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:47,835 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2026-06-15T14:12:47,836 /usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:12:47,837 1802 | __insertion_sort(_RandomAccessIterator __first, 2026-06-15T14:12:47,838 | ^~~~~~~~~~~~~~~~ 2026-06-15T14:12:47,839 /usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:12:47,902 In file included from /usr/include/c++/12/bits/stl_algo.h:60: 2026-06-15T14:12:47,903 /usr/include/c++/12/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Distance = int; _Tp = array; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2026-06-15T14:12:47,905 /usr/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:12:47,907 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, 2026-06-15T14:12:47,908 | ^~~~~~~~~~~~~ 2026-06-15T14:12:51,388 In file included from /usr/include/c++/12/vector:70, 2026-06-15T14:12:51,390 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/include/bbp/sonata/population.h:20: 2026-06-15T14:12:51,391 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]’: 2026-06-15T14:12:51,391 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2026-06-15T14:12:51,392 439 | vector<_Tp, _Alloc>:: 2026-06-15T14:12:51,394 | ^~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:51,668 In file included from /usr/include/c++/12/vector:64: 2026-06-15T14:12:51,669 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’, 2026-06-15T14:12:51,670 inlined from ‘bbp::sonata::Selection bbp::sonata::_getMatchingSelection(const std::vector&, UnaryPredicate) [with T = unsigned int; UnaryPredicate = {anonymous}::_filterStringAttribute >(const std::string&, const std::vector >&) const:: >(const bbp::sonata::NodePopulation&, std::string, bbp::sonata::NodePopulation::matchAttributeValues >(const std::string&, const std::vector >&) const::)::]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/utils.h:34:26, 2026-06-15T14:12:51,671 inlined from ‘bbp::sonata::Selection bbp::sonata::{anonymous}::_filterStringAttribute(const bbp::sonata::NodePopulation&, std::string, UnaryPredicate) [with UnaryPredicate = bbp::sonata::NodePopulation::matchAttributeValues >(const std::string&, const std::vector >&) const::]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/nodes.cpp:84:10, 2026-06-15T14:12:51,672 inlined from ‘bbp::sonata::Selection bbp::sonata::NodePopulation::matchAttributeValues(const std::string&, const std::vector&) const [with T = std::__cxx11::basic_string]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/nodes.cpp:147:57: 2026-06-15T14:12:51,673 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:12:51,674 1287 | _M_realloc_insert(end(), __x); 2026-06-15T14:12:51,675 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-06-15T14:12:52,492 In file included from /usr/include/c++/12/vector:70, 2026-06-15T14:12:52,493 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/utils.h:16, 2026-06-15T14:12:52,494 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/population.cpp:14: 2026-06-15T14:12:52,495 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const std::array&}; _Tp = std::array; _Alloc = std::allocator >]’: 2026-06-15T14:12:52,496 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2026-06-15T14:12:52,497 439 | vector<_Tp, _Alloc>:: 2026-06-15T14:12:52,498 | ^~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:52,742 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]’: 2026-06-15T14:12:52,743 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2026-06-15T14:12:52,804 In file included from /usr/include/c++/12/vector:64: 2026-06-15T14:12:52,805 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’, 2026-06-15T14:12:52,806 inlined from ‘bbp::sonata::Selection bbp::sonata::_getMatchingSelection(const std::vector&, UnaryPredicate) [with T = std::__cxx11::basic_string; UnaryPredicate = std::function)>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/utils.h:34:26: 2026-06-15T14:12:52,808 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:12:52,809 1287 | _M_realloc_insert(end(), __x); 2026-06-15T14:12:52,810 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-06-15T14:12:52,977 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {bbp::sonata::SimulationConfig::ConnectionOverride}; _Tp = bbp::sonata::SimulationConfig::ConnectionOverride; _Alloc = std::allocator]’, 2026-06-15T14:12:52,978 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = bbp::sonata::SimulationConfig::ConnectionOverride; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2026-06-15T14:12:52,979 inlined from ‘std::vector bbp::sonata::SimulationConfig::Parser::parseConnectionOverrides() const’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/config.cpp:1590:29: 2026-06-15T14:12:52,980 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:12:52,981 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:12:52,982 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:59,741 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long int}; _Tp = long long int; _Alloc = std::allocator]’, 2026-06-15T14:12:59,742 inlined from ‘bbp::sonata::detail::NodeSetRulePtr bbp::sonata::detail::_dispatch_node(const std::string&, const json&)’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/node_sets.cpp:504:36: 2026-06-15T14:12:59,743 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2026-06-15T14:12:59,744 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:12:59,745 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:12:59,748 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator]’, 2026-06-15T14:12:59,749 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2026-06-15T14:12:59,750 inlined from ‘std::back_insert_iterator<_Container>& std::back_insert_iterator<_Container>::operator=(typename _Container::value_type&&) [with _Container = std::vector]’ at /usr/include/c++/12/bits/stl_iterator.h:743:22, 2026-06-15T14:12:59,751 inlined from ‘_OIter std::transform(_IIter, _IIter, _OIter, _UnaryOperation) [with _IIter = __gnu_cxx::__normal_iterator > >; _OIter = back_insert_iterator >; _UnaryOperation = bbp::sonata::detail::_dispatch_node(const std::string&, const json&)::]’ at /usr/include/c++/12/bits/stl_algo.h:4263:12, 2026-06-15T14:12:59,752 inlined from ‘bbp::sonata::detail::NodeSetRulePtr bbp::sonata::detail::_dispatch_node(const std::string&, const json&)’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/node_sets.cpp:509:31: 2026-06-15T14:12:59,754 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:12:59,755 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:12:59,756 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:01,182 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {bbp::sonata::SimulationConfig::EField}; _Tp = bbp::sonata::SimulationConfig::EField; _Alloc = std::allocator]’, 2026-06-15T14:13:01,183 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = bbp::sonata::SimulationConfig::EField; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2026-06-15T14:13:01,184 inlined from ‘void bbp::sonata::{anonymous}::parseInputsEFields(const nlohmann::json&, const std::string&, std::vector&, double)’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/config.cpp:445:22: 2026-06-15T14:13:01,185 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:01,186 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:13:01,187 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:02,318 In file included from /usr/include/c++/12/map:60, 2026-06-15T14:13:02,319 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:61, 2026-06-15T14:13:02,320 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/node_sets.cpp:10: 2026-06-15T14:13:02,321 /usr/include/c++/12/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, nlohmann::basic_json<> >; _KeyOfValue = std::_Select1st, nlohmann::basic_json<> > >; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’: 2026-06-15T14:13:02,322 /usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, nlohmann::basic_json<> >, std::_Select1st, nlohmann::basic_json<> > >, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’ changed in GCC 7.1 2026-06-15T14:13:02,323 2457 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2026-06-15T14:13:02,323 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:02,398 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2026-06-15T14:13:02,399 /usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:02,400 1908 | __introsort_loop(_RandomAccessIterator __first, 2026-06-15T14:13:02,401 | ^~~~~~~~~~~~~~~~ 2026-06-15T14:13:02,401 /usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:02,402 /usr/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:02,403 1922 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); 2026-06-15T14:13:02,404 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:02,416 In file included from /usr/include/c++/12/map:61: 2026-06-15T14:13:02,417 /usr/include/c++/12/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = nlohmann::basic_json<>; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’: 2026-06-15T14:13:02,417 /usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, nlohmann::basic_json<> >, std::_Select1st, nlohmann::basic_json<> > >, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’ changed in GCC 7.1 2026-06-15T14:13:02,418 511 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2026-06-15T14:13:02,419 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:02,420 512 | std::tuple(__k), 2026-06-15T14:13:02,422 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:02,423 513 | std::tuple<>()); 2026-06-15T14:13:02,424 | ~~~~~~~~~~~~~~~ 2026-06-15T14:13:02,485 In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = nlohmann::basic_json<>; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’, 2026-06-15T14:13:02,486 inlined from ‘bool nlohmann::detail::json_sax_dom_callback_parser::key(string_t&) [with BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5599:76: 2026-06-15T14:13:02,487 /usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, nlohmann::basic_json<> >, std::_Select1st, nlohmann::basic_json<> > >, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’ changed in GCC 7.1 2026-06-15T14:13:02,488 511 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2026-06-15T14:13:02,489 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:02,490 512 | std::tuple(__k), 2026-06-15T14:13:02,491 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:02,491 513 | std::tuple<>()); 2026-06-15T14:13:02,492 | ~~~~~~~~~~~~~~~ 2026-06-15T14:13:02,595 In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, 2026-06-15T14:13:02,597 inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]’ at /usr/include/c++/12/bits/stl_algo.h:4820:18, 2026-06-15T14:13:02,597 inlined from ‘std::vector bbp::sonata::bulk_read::sortAndMerge(const std::vector&, size_t, size_t) [with Range = std::array]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/read_bulk.hpp:79:14: 2026-06-15T14:13:02,598 /usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:02,599 1937 | std::__introsort_loop(__first, __last, 2026-06-15T14:13:02,600 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 2026-06-15T14:13:02,601 1938 | std::__lg(__last - __first) * 2, 2026-06-15T14:13:02,602 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:02,603 1939 | __comp); 2026-06-15T14:13:02,605 | ~~~~~~~ 2026-06-15T14:13:02,606 In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, 2026-06-15T14:13:02,607 inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/12/bits/stl_algo.h:1940:31, 2026-06-15T14:13:02,608 inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]’ at /usr/include/c++/12/bits/stl_algo.h:4820:18, 2026-06-15T14:13:02,609 inlined from ‘std::vector bbp::sonata::bulk_read::sortAndMerge(const std::vector&, size_t, size_t) [with Range = std::array]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/read_bulk.hpp:79:14: 2026-06-15T14:13:02,610 /usr/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:02,611 1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); 2026-06-15T14:13:02,612 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:02,613 /usr/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:02,614 1854 | std::__insertion_sort(__first, __last, __comp); 2026-06-15T14:13:02,615 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:02,616 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = std::array; _Alloc = std::allocator >]’, 2026-06-15T14:13:02,617 inlined from ‘std::vector bbp::sonata::bulk_read::sortAndMerge(const std::vector&, size_t, size_t) [with Range = std::array]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/read_bulk.hpp:89:18: 2026-06-15T14:13:02,618 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:02,618 1287 | _M_realloc_insert(end(), __x); 2026-06-15T14:13:02,619 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-06-15T14:13:02,620 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = std::array; _Alloc = std::allocator >]’, 2026-06-15T14:13:02,621 inlined from ‘std::vector bbp::sonata::bulk_read::sortAndMerge(const std::vector&, size_t, size_t) [with Range = std::array]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/read_bulk.hpp:99:26: 2026-06-15T14:13:02,622 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:02,623 1287 | _M_realloc_insert(end(), __x); 2026-06-15T14:13:02,624 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-06-15T14:13:06,928 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’: 2026-06-15T14:13:06,929 /usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ changed in GCC 7.1 2026-06-15T14:13:06,930 523 | vector<_Tp, _Alloc>:: 2026-06-15T14:13:06,931 | ^~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:07,233 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, size_type, const value_type&) [with _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’, 2026-06-15T14:13:07,234 inlined from ‘nlohmann::basic_json::value_type& nlohmann::basic_json::operator[](size_type) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer; BinaryType = std::vector >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:20004:38, 2026-06-15T14:13:07,235 inlined from ‘BasicJsonType& nlohmann::json_pointer::get_and_create(BasicJsonType&) const [with BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:11949:53, 2026-06-15T14:13:07,236 inlined from ‘static BasicJsonType nlohmann::json_pointer::unflatten(const BasicJsonType&) [with BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:12468:55: 2026-06-15T14:13:07,237 /usr/include/c++/12/bits/stl_vector.h:1435:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2026-06-15T14:13:07,238 1435 | _M_fill_insert(begin() + __offset, __n, __x); 2026-06-15T14:13:07,239 | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:07,240 In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = nlohmann::basic_json<>; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’, 2026-06-15T14:13:07,241 inlined from ‘nlohmann::basic_json::value_type& nlohmann::basic_json::operator[](const typename object_t::key_type&) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer; BinaryType = std::vector >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:20085:46, 2026-06-15T14:13:07,242 inlined from ‘BasicJsonType& nlohmann::json_pointer::get_and_create(BasicJsonType&) const [with BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:11954:53, 2026-06-15T14:13:07,243 inlined from ‘static BasicJsonType nlohmann::json_pointer::unflatten(const BasicJsonType&) [with BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:12468:55: 2026-06-15T14:13:07,244 /usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, nlohmann::basic_json<> >, std::_Select1st, nlohmann::basic_json<> > >, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’ changed in GCC 7.1 2026-06-15T14:13:07,246 511 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2026-06-15T14:13:07,247 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:07,248 512 | std::tuple(__k), 2026-06-15T14:13:07,249 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:07,250 513 | std::tuple<>()); 2026-06-15T14:13:07,251 | ~~~~~~~~~~~~~~~ 2026-06-15T14:13:07,252 In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = nlohmann::basic_json<>; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’, 2026-06-15T14:13:07,253 inlined from ‘nlohmann::basic_json::value_type& nlohmann::basic_json::operator[](const typename object_t::key_type&) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer; BinaryType = std::vector >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:20085:46, 2026-06-15T14:13:07,255 inlined from ‘BasicJsonType& nlohmann::json_pointer::get_and_create(BasicJsonType&) const [with BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:11962:49, 2026-06-15T14:13:07,256 inlined from ‘static BasicJsonType nlohmann::json_pointer::unflatten(const BasicJsonType&) [with BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:12468:55: 2026-06-15T14:13:07,257 /usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, nlohmann::basic_json<> >, std::_Select1st, nlohmann::basic_json<> > >, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’ changed in GCC 7.1 2026-06-15T14:13:07,257 511 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2026-06-15T14:13:07,258 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:07,259 512 | std::tuple(__k), 2026-06-15T14:13:07,260 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:07,261 513 | std::tuple<>()); 2026-06-15T14:13:07,262 | ~~~~~~~~~~~~~~~ 2026-06-15T14:13:07,276 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, size_type, const value_type&) [with _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’, 2026-06-15T14:13:07,277 inlined from ‘nlohmann::basic_json::value_type& nlohmann::basic_json::operator[](size_type) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer; BinaryType = std::vector >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:20004:38, 2026-06-15T14:13:07,278 inlined from ‘BasicJsonType& nlohmann::json_pointer::get_and_create(BasicJsonType&) const [with BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:11969:49, 2026-06-15T14:13:07,279 inlined from ‘static BasicJsonType nlohmann::json_pointer::unflatten(const BasicJsonType&) [with BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:12468:55: 2026-06-15T14:13:07,280 /usr/include/c++/12/bits/stl_vector.h:1435:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2026-06-15T14:13:07,280 1435 | _M_fill_insert(begin() + __offset, __n, __x); 2026-06-15T14:13:07,281 | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:09,307 In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, 2026-06-15T14:13:09,308 inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]’ at /usr/include/c++/12/bits/stl_algo.h:4820:18, 2026-06-15T14:13:09,310 inlined from ‘bbp::sonata::Selection bbp::sonata::{anonymous}::_matchAttributeValues(const bbp::sonata::NodePopulation&, const std::string&, const std::vector&) [with T = long long int]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/nodes.cpp:37:18, 2026-06-15T14:13:09,311 inlined from ‘bbp::sonata::Selection bbp::sonata::NodePopulation::matchAttributeValues(const std::string&, const std::vector&) const [with T = long long int]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/nodes.cpp:122:65: 2026-06-15T14:13:09,312 /usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2026-06-15T14:13:09,313 1937 | std::__introsort_loop(__first, __last, 2026-06-15T14:13:09,315 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 2026-06-15T14:13:09,316 1938 | std::__lg(__last - __first) * 2, 2026-06-15T14:13:09,317 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:09,319 1939 | __comp); 2026-06-15T14:13:09,320 | ~~~~~~~ 2026-06-15T14:13:09,322 In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, 2026-06-15T14:13:09,323 inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/12/bits/stl_algo.h:1940:31, 2026-06-15T14:13:09,324 inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]’ at /usr/include/c++/12/bits/stl_algo.h:4820:18, 2026-06-15T14:13:09,325 inlined from ‘bbp::sonata::Selection bbp::sonata::{anonymous}::_matchAttributeValues(const bbp::sonata::NodePopulation&, const std::string&, const std::vector&) [with T = long long int]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/nodes.cpp:37:18, 2026-06-15T14:13:09,326 inlined from ‘bbp::sonata::Selection bbp::sonata::NodePopulation::matchAttributeValues(const std::string&, const std::vector&) const [with T = long long int]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/nodes.cpp:122:65: 2026-06-15T14:13:09,328 /usr/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2026-06-15T14:13:09,329 1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); 2026-06-15T14:13:09,330 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:09,331 /usr/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2026-06-15T14:13:09,331 1854 | std::__insertion_sort(__first, __last, __comp); 2026-06-15T14:13:09,332 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:09,425 [ 64%] Building CXX object CMakeFiles/sonata_static.dir/src/report_reader.cpp.o 2026-06-15T14:13:09,623 In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, 2026-06-15T14:13:09,624 inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ at /usr/include/c++/12/bits/stl_algo.h:4820:18, 2026-06-15T14:13:09,625 inlined from ‘bbp::sonata::Selection bbp::sonata::{anonymous}::_matchAttributeValues(const bbp::sonata::NodePopulation&, const std::string&, const std::vector&) [with T = long long unsigned int]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/nodes.cpp:37:18, 2026-06-15T14:13:09,626 inlined from ‘bbp::sonata::Selection bbp::sonata::NodePopulation::matchAttributeValues(const std::string&, const std::vector&) const [with T = long long unsigned int]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/nodes.cpp:122:65: 2026-06-15T14:13:09,628 /usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:09,629 1937 | std::__introsort_loop(__first, __last, 2026-06-15T14:13:09,630 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 2026-06-15T14:13:09,631 1938 | std::__lg(__last - __first) * 2, 2026-06-15T14:13:09,631 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:09,632 1939 | __comp); 2026-06-15T14:13:09,633 | ~~~~~~~ 2026-06-15T14:13:09,634 In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, 2026-06-15T14:13:09,635 inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/12/bits/stl_algo.h:1940:31, 2026-06-15T14:13:09,636 inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ at /usr/include/c++/12/bits/stl_algo.h:4820:18, 2026-06-15T14:13:09,637 inlined from ‘bbp::sonata::Selection bbp::sonata::{anonymous}::_matchAttributeValues(const bbp::sonata::NodePopulation&, const std::string&, const std::vector&) [with T = long long unsigned int]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/nodes.cpp:37:18, 2026-06-15T14:13:09,638 inlined from ‘bbp::sonata::Selection bbp::sonata::NodePopulation::matchAttributeValues(const std::string&, const std::vector&) const [with T = long long unsigned int]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/nodes.cpp:122:65: 2026-06-15T14:13:09,639 /usr/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:09,640 1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); 2026-06-15T14:13:09,641 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:09,642 /usr/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:09,643 1854 | std::__insertion_sort(__first, __last, __comp); 2026-06-15T14:13:09,644 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:12,002 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’, 2026-06-15T14:13:12,003 inlined from ‘bbp::sonata::Selection bbp::sonata::_getMatchingSelection(const std::vector&, UnaryPredicate) [with T = float; UnaryPredicate = std::function]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/utils.h:34:26, 2026-06-15T14:13:12,004 inlined from ‘bbp::sonata::Selection bbp::sonata::Population::filterAttribute(const std::string&, std::function) const [with T = float]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/population.cpp:228:46: 2026-06-15T14:13:12,005 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:12,006 1287 | _M_realloc_insert(end(), __x); 2026-06-15T14:13:12,007 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-06-15T14:13:12,090 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’, 2026-06-15T14:13:12,091 inlined from ‘bbp::sonata::Selection bbp::sonata::_getMatchingSelection(const std::vector&, UnaryPredicate) [with T = double; UnaryPredicate = std::function]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/utils.h:34:26, 2026-06-15T14:13:12,092 inlined from ‘bbp::sonata::Selection bbp::sonata::Population::filterAttribute(const std::string&, std::function) const [with T = double]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/population.cpp:228:46: 2026-06-15T14:13:12,093 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:12,094 1287 | _M_realloc_insert(end(), __x); 2026-06-15T14:13:12,095 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-06-15T14:13:12,175 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’, 2026-06-15T14:13:12,176 inlined from ‘bbp::sonata::Selection bbp::sonata::_getMatchingSelection(const std::vector&, UnaryPredicate) [with T = signed char; UnaryPredicate = std::function]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/utils.h:34:26, 2026-06-15T14:13:12,177 inlined from ‘bbp::sonata::Selection bbp::sonata::Population::filterAttribute(const std::string&, std::function) const [with T = signed char]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/population.cpp:228:46: 2026-06-15T14:13:12,178 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:12,179 1287 | _M_realloc_insert(end(), __x); 2026-06-15T14:13:12,180 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-06-15T14:13:12,202 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2026-06-15T14:13:12,203 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2026-06-15T14:13:12,203 439 | vector<_Tp, _Alloc>:: 2026-06-15T14:13:12,204 | ^~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:12,260 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’, 2026-06-15T14:13:12,261 inlined from ‘bbp::sonata::Selection bbp::sonata::_getMatchingSelection(const std::vector&, UnaryPredicate) [with T = unsigned char; UnaryPredicate = std::function]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/utils.h:34:26, 2026-06-15T14:13:12,262 inlined from ‘bbp::sonata::Selection bbp::sonata::Population::filterAttribute(const std::string&, std::function) const [with T = unsigned char]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/population.cpp:228:46: 2026-06-15T14:13:12,264 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:12,265 1287 | _M_realloc_insert(end(), __x); 2026-06-15T14:13:12,266 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-06-15T14:13:12,317 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_insert_rval(const_iterator, value_type&&) [with _Tp = double; _Alloc = std::allocator]’, 2026-06-15T14:13:12,318 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1389:30, 2026-06-15T14:13:12,319 inlined from ‘std::insert_iterator<_Container>& std::insert_iterator<_Container>::operator=(typename _Container::value_type&&) [with _Container = std::vector >]’ at /usr/include/c++/12/bits/stl_iterator.h:973:26, 2026-06-15T14:13:12,320 inlined from ‘_OIter std::transform(_IIter, _IIter, _OIter, _UnaryOperation) [with _IIter = nlohmann::detail::iter_impl >; _OIter = insert_iterator > >; _UnaryOperation = nlohmann::detail::from_json_array_impl, std::vector > >(const nlohmann::basic_json<>&, std::vector >&, priority_tag<1>)::&)>]’ at /usr/include/c++/12/bits/stl_algo.h:4263:12, 2026-06-15T14:13:12,321 inlined from ‘decltype (((arr.reserve(declval()), j.get()), void())) nlohmann::detail::from_json_array_impl(const BasicJsonType&, ConstructibleArrayType&, priority_tag<1>) [with BasicJsonType = nlohmann::basic_json<>; ConstructibleArrayType = std::vector >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:3601:19, 2026-06-15T14:13:12,322 inlined from ‘decltype (((nlohmann::detail::from_json_array_impl(j, arr, (nlohmann::detail::priority_tag<3>)(())), j.get()), void())) nlohmann::detail::from_json(const BasicJsonType&, ConstructibleArrayType&) [with BasicJsonType = nlohmann::basic_json<>; ConstructibleArrayType = std::vector >; typename std::enable_if<((((is_constructible_array_type::value && (! is_constructible_object_type::value)) && (! is_constructible_string_type::value)) && (! std::is_same::value)) && (! is_basic_json::value)), int>::type = 0]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:3648:25: 2026-06-15T14:13:12,324 /usr/include/c++/12/bits/vector.tcc:366:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2026-06-15T14:13:12,324 366 | _M_realloc_insert(begin() + __n, std::move(__v)); 2026-06-15T14:13:12,325 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:12,349 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’, 2026-06-15T14:13:12,350 inlined from ‘bbp::sonata::Selection bbp::sonata::_getMatchingSelection(const std::vector&, UnaryPredicate) [with T = short int; UnaryPredicate = std::function]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/utils.h:34:26, 2026-06-15T14:13:12,351 inlined from ‘bbp::sonata::Selection bbp::sonata::Population::filterAttribute(const std::string&, std::function) const [with T = short int]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/population.cpp:228:46: 2026-06-15T14:13:12,352 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:12,353 1287 | _M_realloc_insert(end(), __x); 2026-06-15T14:13:12,354 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-06-15T14:13:12,434 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’, 2026-06-15T14:13:12,435 inlined from ‘bbp::sonata::Selection bbp::sonata::_getMatchingSelection(const std::vector&, UnaryPredicate) [with T = short unsigned int; UnaryPredicate = std::function]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/utils.h:34:26, 2026-06-15T14:13:12,436 inlined from ‘bbp::sonata::Selection bbp::sonata::Population::filterAttribute(const std::string&, std::function) const [with T = short unsigned int]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/population.cpp:228:46: 2026-06-15T14:13:12,437 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:12,438 1287 | _M_realloc_insert(end(), __x); 2026-06-15T14:13:12,439 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-06-15T14:13:12,519 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’, 2026-06-15T14:13:12,520 inlined from ‘bbp::sonata::Selection bbp::sonata::_getMatchingSelection(const std::vector&, UnaryPredicate) [with T = int; UnaryPredicate = std::function]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/utils.h:34:26, 2026-06-15T14:13:12,521 inlined from ‘bbp::sonata::Selection bbp::sonata::Population::filterAttribute(const std::string&, std::function) const [with T = int]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/population.cpp:228:46: 2026-06-15T14:13:12,522 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:12,523 1287 | _M_realloc_insert(end(), __x); 2026-06-15T14:13:12,523 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-06-15T14:13:12,612 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’, 2026-06-15T14:13:12,613 inlined from ‘bbp::sonata::Selection bbp::sonata::_getMatchingSelection(const std::vector&, UnaryPredicate) [with T = unsigned int; UnaryPredicate = std::function]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/utils.h:34:26, 2026-06-15T14:13:12,614 inlined from ‘bbp::sonata::Selection bbp::sonata::Population::filterAttribute(const std::string&, std::function) const [with T = unsigned int]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/population.cpp:228:46: 2026-06-15T14:13:12,615 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:12,616 1287 | _M_realloc_insert(end(), __x); 2026-06-15T14:13:12,617 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-06-15T14:13:12,701 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’, 2026-06-15T14:13:12,702 inlined from ‘bbp::sonata::Selection bbp::sonata::_getMatchingSelection(const std::vector&, UnaryPredicate) [with T = long long int; UnaryPredicate = std::function]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/utils.h:34:26, 2026-06-15T14:13:12,703 inlined from ‘bbp::sonata::Selection bbp::sonata::Population::filterAttribute(const std::string&, std::function) const [with T = long long int]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/population.cpp:228:46: 2026-06-15T14:13:12,704 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:12,705 1287 | _M_realloc_insert(end(), __x); 2026-06-15T14:13:12,706 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-06-15T14:13:12,792 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’, 2026-06-15T14:13:12,793 inlined from ‘bbp::sonata::Selection bbp::sonata::_getMatchingSelection(const std::vector&, UnaryPredicate) [with T = long long unsigned int; UnaryPredicate = std::function]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/utils.h:34:26, 2026-06-15T14:13:12,794 inlined from ‘bbp::sonata::Selection bbp::sonata::Population::filterAttribute(const std::string&, std::function) const [with T = long long unsigned int]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/population.cpp:228:46: 2026-06-15T14:13:12,795 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:12,796 1287 | _M_realloc_insert(end(), __x); 2026-06-15T14:13:12,797 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-06-15T14:13:15,164 [ 70%] Building CXX object CMakeFiles/sonata_static.dir/src/selection.cpp.o 2026-06-15T14:13:16,685 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp: In instantiation of ‘bbp::sonata::DataFrame bbp::sonata::ReportReader::Population::get(const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&) const [with KeyType = long long unsigned int]’: 2026-06-15T14:13:16,686 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:598:16: required from here 2026-06-15T14:13:16,687 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:570:42: warning: narrowing conversion of ‘(long long unsigned int)min’ from ‘long long unsigned int’ to ‘unsigned int’ [-Wnarrowing] 2026-06-15T14:13:16,688 570 | dataset.select({timer_index, min}, {1, max - min}).squeezeMemSpace({0}).read(buffer); 2026-06-15T14:13:16,689 | ^~~ 2026-06-15T14:13:16,690 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:570:42: warning: narrowing conversion of ‘min’ from ‘const long long unsigned int’ to ‘unsigned int’ [-Wnarrowing] 2026-06-15T14:13:16,691 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:570:56: warning: narrowing conversion of ‘(((long long unsigned int)max) - ((long long unsigned int)min))’ from ‘long long unsigned int’ to ‘unsigned int’ [-Wnarrowing] 2026-06-15T14:13:16,692 570 | dataset.select({timer_index, min}, {1, max - min}).squeezeMemSpace({0}).read(buffer); 2026-06-15T14:13:16,693 | ~~~~^~~~~ 2026-06-15T14:13:16,694 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:570:56: warning: narrowing conversion of ‘(((long long unsigned int)max) - ((long long unsigned int)min))’ from ‘long long unsigned int’ to ‘unsigned int’ [-Wnarrowing] 2026-06-15T14:13:16,753 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp: In instantiation of ‘bbp::sonata::ReportReader::Population::NodeIdElementLayout bbp::sonata::ReportReader::Population::getNodeIdElementLayout(const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&) const [with KeyType = long long unsigned int]’: 2026-06-15T14:13:16,754 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:598:16: required from here 2026-06-15T14:13:16,755 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:438:38: warning: narrowing conversion of ‘(long long unsigned int)min’ from ‘long long unsigned int’ to ‘unsigned int’ [-Wnarrowing] 2026-06-15T14:13:16,756 438 | dataset_elem_ids.select({min}, {max - min}).read(element_ids); 2026-06-15T14:13:16,757 | ^~~ 2026-06-15T14:13:16,758 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:438:38: warning: narrowing conversion of ‘min’ from ‘const long long unsigned int’ to ‘unsigned int’ [-Wnarrowing] 2026-06-15T14:13:16,759 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:438:49: warning: narrowing conversion of ‘(((long long unsigned int)max) - ((long long unsigned int)min))’ from ‘long long unsigned int’ to ‘unsigned int’ [-Wnarrowing] 2026-06-15T14:13:16,761 438 | dataset_elem_ids.select({min}, {max - min}).read(element_ids); 2026-06-15T14:13:16,762 | ~~~~^~~~~ 2026-06-15T14:13:16,762 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:438:49: warning: narrowing conversion of ‘(((long long unsigned int)max) - ((long long unsigned int)min))’ from ‘long long unsigned int’ to ‘unsigned int’ [-Wnarrowing] 2026-06-15T14:13:16,763 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:461:32: warning: narrowing conversion of ‘std::get<0, long long unsigned int, 2>((* & result.bbp::sonata::ReportReader::Population::NodeIdElementLayout::node_ranges.std::vector >::operator[](((std::vector >::size_type)((long long unsigned int)index)))))’ from ‘long long unsigned int’ to ‘unsigned int’ [-Wnarrowing] 2026-06-15T14:13:16,764 461 | dataset_elem_ids.select({std::get<0>(result.node_ranges[index])}, {1}).read(element_ids); 2026-06-15T14:13:16,765 | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:16,766 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:461:32: warning: narrowing conversion of ‘std::get<0, long long unsigned int, 2>((* & result.bbp::sonata::ReportReader::Population::NodeIdElementLayout::node_ranges.std::vector >::operator[](((std::vector >::size_type)((long long unsigned int)index)))))’ from ‘long long unsigned int’ to ‘unsigned int’ [-Wnarrowing] 2026-06-15T14:13:16,816 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp: In instantiation of ‘bbp::sonata::DataFrame bbp::sonata::ReportReader::Population::get(const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&) const [with KeyType = std::array]’: 2026-06-15T14:13:16,817 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:599:16: required from here 2026-06-15T14:13:16,818 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:570:42: warning: narrowing conversion of ‘(long long unsigned int)min’ from ‘long long unsigned int’ to ‘unsigned int’ [-Wnarrowing] 2026-06-15T14:13:16,819 570 | dataset.select({timer_index, min}, {1, max - min}).squeezeMemSpace({0}).read(buffer); 2026-06-15T14:13:16,820 | ^~~ 2026-06-15T14:13:16,821 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:570:42: warning: narrowing conversion of ‘min’ from ‘const long long unsigned int’ to ‘unsigned int’ [-Wnarrowing] 2026-06-15T14:13:16,822 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:570:56: warning: narrowing conversion of ‘(((long long unsigned int)max) - ((long long unsigned int)min))’ from ‘long long unsigned int’ to ‘unsigned int’ [-Wnarrowing] 2026-06-15T14:13:16,823 570 | dataset.select({timer_index, min}, {1, max - min}).squeezeMemSpace({0}).read(buffer); 2026-06-15T14:13:16,824 | ~~~~^~~~~ 2026-06-15T14:13:16,825 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:570:56: warning: narrowing conversion of ‘(((long long unsigned int)max) - ((long long unsigned int)min))’ from ‘long long unsigned int’ to ‘unsigned int’ [-Wnarrowing] 2026-06-15T14:13:16,868 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp: In instantiation of ‘bbp::sonata::ReportReader::Population::NodeIdElementLayout bbp::sonata::ReportReader::Population::getNodeIdElementLayout(const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&) const [with KeyType = std::array]’: 2026-06-15T14:13:16,869 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:599:16: required from here 2026-06-15T14:13:16,870 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:438:38: warning: narrowing conversion of ‘(long long unsigned int)min’ from ‘long long unsigned int’ to ‘unsigned int’ [-Wnarrowing] 2026-06-15T14:13:16,871 438 | dataset_elem_ids.select({min}, {max - min}).read(element_ids); 2026-06-15T14:13:16,872 | ^~~ 2026-06-15T14:13:16,872 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:438:38: warning: narrowing conversion of ‘min’ from ‘const long long unsigned int’ to ‘unsigned int’ [-Wnarrowing] 2026-06-15T14:13:16,873 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:438:49: warning: narrowing conversion of ‘(((long long unsigned int)max) - ((long long unsigned int)min))’ from ‘long long unsigned int’ to ‘unsigned int’ [-Wnarrowing] 2026-06-15T14:13:16,874 438 | dataset_elem_ids.select({min}, {max - min}).read(element_ids); 2026-06-15T14:13:16,875 | ~~~~^~~~~ 2026-06-15T14:13:16,876 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:438:49: warning: narrowing conversion of ‘(((long long unsigned int)max) - ((long long unsigned int)min))’ from ‘long long unsigned int’ to ‘unsigned int’ [-Wnarrowing] 2026-06-15T14:13:16,878 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:461:32: warning: narrowing conversion of ‘std::get<0, long long unsigned int, 2>((* & result.bbp::sonata::ReportReader >::Population::NodeIdElementLayout::node_ranges.std::vector >::operator[](((std::vector >::size_type)((long long unsigned int)index)))))’ from ‘long long unsigned int’ to ‘unsigned int’ [-Wnarrowing] 2026-06-15T14:13:16,879 461 | dataset_elem_ids.select({std::get<0>(result.node_ranges[index])}, {1}).read(element_ids); 2026-06-15T14:13:16,880 | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:16,881 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:461:32: warning: narrowing conversion of ‘std::get<0, long long unsigned int, 2>((* & result.bbp::sonata::ReportReader >::Population::NodeIdElementLayout::node_ranges.std::vector >::operator[](((std::vector >::size_type)((long long unsigned int)index)))))’ from ‘long long unsigned int’ to ‘unsigned int’ [-Wnarrowing] 2026-06-15T14:13:20,234 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’, 2026-06-15T14:13:20,235 inlined from ‘bbp::sonata::Selection bbp::sonata::_getMatchingSelection(const std::vector&, UnaryPredicate) [with T = unsigned int; UnaryPredicate = {anonymous}::_filterStringAttribute >(const bbp::sonata::NodePopulation&, std::string, bbp::sonata::NodePopulation::regexMatch(const std::string&, const std::string&) const::)::]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/utils.h:34:26, 2026-06-15T14:13:20,237 inlined from ‘bbp::sonata::Selection bbp::sonata::{anonymous}::_filterStringAttribute(const bbp::sonata::NodePopulation&, std::string, UnaryPredicate) [with UnaryPredicate = bbp::sonata::NodePopulation::regexMatch(const std::string&, const std::string&) const::]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/nodes.cpp:84:10, 2026-06-15T14:13:20,238 inlined from ‘bbp::sonata::Selection bbp::sonata::NodePopulation::regexMatch(const std::string&, const std::string&) const’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/nodes.cpp:110:57: 2026-06-15T14:13:20,239 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:20,240 1287 | _M_realloc_insert(end(), __x); 2026-06-15T14:13:20,241 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-06-15T14:13:21,412 [ 76%] Building CXX object CMakeFiles/sonata_static.dir/src/utils.cpp.o 2026-06-15T14:13:25,993 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {nlohmann::detail::value_t}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’, 2026-06-15T14:13:25,994 inlined from ‘BasicJsonType* nlohmann::detail::json_sax_dom_parser::handle_value(Value&&) [with Value = nlohmann::detail::value_t; BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5479:58, 2026-06-15T14:13:25,996 inlined from ‘bool nlohmann::detail::json_sax_dom_parser::start_object(std::size_t) [with BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5397:41, 2026-06-15T14:13:25,997 inlined from ‘bool nlohmann::detail::parser::sax_parse_internal(SAX*) [with SAX = nlohmann::detail::json_sax_dom_parser >; BasicJsonType = nlohmann::basic_json<>; InputAdapterType = nlohmann::detail::iterator_input_adapter<__gnu_cxx::__normal_iterator > >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:10302:29: 2026-06-15T14:13:25,998 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2026-06-15T14:13:25,999 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:13:26,000 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:26,001 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {nlohmann::detail::value_t}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’, 2026-06-15T14:13:26,002 inlined from ‘BasicJsonType* nlohmann::detail::json_sax_dom_parser::handle_value(Value&&) [with Value = nlohmann::detail::value_t; BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5479:58, 2026-06-15T14:13:26,003 inlined from ‘bool nlohmann::detail::json_sax_dom_parser::start_array(std::size_t) [with BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5423:41, 2026-06-15T14:13:26,004 inlined from ‘bool nlohmann::detail::parser::sax_parse_internal(SAX*) [with SAX = nlohmann::detail::json_sax_dom_parser >; BasicJsonType = nlohmann::basic_json<>; InputAdapterType = nlohmann::detail::iterator_input_adapter<__gnu_cxx::__normal_iterator > >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:10349:29: 2026-06-15T14:13:26,005 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2026-06-15T14:13:26,006 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:13:26,007 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:26,008 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long int&}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’, 2026-06-15T14:13:26,009 inlined from ‘BasicJsonType* nlohmann::detail::json_sax_dom_parser::handle_value(Value&&) [with Value = long long int&; BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5479:58, 2026-06-15T14:13:26,010 inlined from ‘bool nlohmann::detail::json_sax_dom_parser::number_integer(number_integer_t) [with BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5367:21, 2026-06-15T14:13:26,011 inlined from ‘bool nlohmann::detail::parser::sax_parse_internal(SAX*) [with SAX = nlohmann::detail::json_sax_dom_parser >; BasicJsonType = nlohmann::basic_json<>; InputAdapterType = nlohmann::detail::iterator_input_adapter<__gnu_cxx::__normal_iterator > >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:10419:29: 2026-06-15T14:13:26,012 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2026-06-15T14:13:26,013 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:13:26,014 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:26,015 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >&}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’, 2026-06-15T14:13:26,016 inlined from ‘BasicJsonType* nlohmann::detail::json_sax_dom_parser::handle_value(Value&&) [with Value = std::__cxx11::basic_string&; BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5479:58, 2026-06-15T14:13:26,017 inlined from ‘bool nlohmann::detail::json_sax_dom_parser::string(string_t&) [with BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5385:21, 2026-06-15T14:13:26,019 inlined from ‘bool nlohmann::detail::parser::sax_parse_internal(SAX*) [with SAX = nlohmann::detail::json_sax_dom_parser >; BasicJsonType = nlohmann::basic_json<>; InputAdapterType = nlohmann::detail::iterator_input_adapter<__gnu_cxx::__normal_iterator > >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:10428:29: 2026-06-15T14:13:26,020 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2026-06-15T14:13:26,021 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:13:26,022 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:26,024 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int&}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’, 2026-06-15T14:13:26,025 inlined from ‘BasicJsonType* nlohmann::detail::json_sax_dom_parser::handle_value(Value&&) [with Value = long long unsigned int&; BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5479:58, 2026-06-15T14:13:26,028 inlined from ‘bool nlohmann::detail::json_sax_dom_parser::number_unsigned(number_unsigned_t) [with BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5373:21, 2026-06-15T14:13:26,029 inlined from ‘bool nlohmann::detail::parser::sax_parse_internal(SAX*) [with SAX = nlohmann::detail::json_sax_dom_parser >; BasicJsonType = nlohmann::basic_json<>; InputAdapterType = nlohmann::detail::iterator_input_adapter<__gnu_cxx::__normal_iterator > >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:10437:29: 2026-06-15T14:13:26,030 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2026-06-15T14:13:26,031 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:13:26,033 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:27,368 In file included from /usr/include/c++/12/algorithm:61, 2026-06-15T14:13:27,369 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/fmt/include/fmt/format-inl.h:12, 2026-06-15T14:13:27,370 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/fmt/include/fmt/format.h:4417, 2026-06-15T14:13:27,371 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/selection.cpp:3: 2026-06-15T14:13:27,372 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: 2026-06-15T14:13:27,373 /usr/include/c++/12/bits/stl_algo.h:1782:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:27,374 1782 | __unguarded_linear_insert(_RandomAccessIterator __last, 2026-06-15T14:13:27,376 | ^~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:27,442 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2026-06-15T14:13:27,443 /usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:27,444 1802 | __insertion_sort(_RandomAccessIterator __first, 2026-06-15T14:13:27,445 | ^~~~~~~~~~~~~~~~ 2026-06-15T14:13:27,445 /usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:27,524 In file included from /usr/include/c++/12/bits/stl_algo.h:60: 2026-06-15T14:13:27,525 /usr/include/c++/12/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Distance = int; _Tp = array; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2026-06-15T14:13:27,526 /usr/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:27,527 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, 2026-06-15T14:13:27,528 | ^~~~~~~~~~~~~ 2026-06-15T14:13:28,941 In file included from /usr/include/c++/12/vector:70, 2026-06-15T14:13:28,943 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/include/bbp/sonata/selection.h:7, 2026-06-15T14:13:28,944 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/selection.cpp:1: 2026-06-15T14:13:28,945 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const std::array&}; _Tp = std::array; _Alloc = std::allocator >]’: 2026-06-15T14:13:28,946 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2026-06-15T14:13:28,947 439 | vector<_Tp, _Alloc>:: 2026-06-15T14:13:28,948 | ^~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:28,995 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {std::array}; _Tp = std::array; _Alloc = std::allocator >]’: 2026-06-15T14:13:28,996 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2026-06-15T14:13:30,419 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {nlohmann::detail::value_t}; _Tp = nlohmann::basic_json; _Alloc = std::allocator >]’, 2026-06-15T14:13:30,420 inlined from ‘BasicJsonType* nlohmann::detail::json_sax_dom_parser::handle_value(Value&&) [with Value = nlohmann::detail::value_t; BasicJsonType = nlohmann::basic_json]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5479:58, 2026-06-15T14:13:30,421 inlined from ‘bool nlohmann::detail::json_sax_dom_parser::start_object(std::size_t) [with BasicJsonType = nlohmann::basic_json]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5397:41, 2026-06-15T14:13:30,422 inlined from ‘bool nlohmann::detail::parser::sax_parse_internal(SAX*) [with SAX = nlohmann::detail::json_sax_dom_parser >; BasicJsonType = nlohmann::basic_json; InputAdapterType = nlohmann::detail::iterator_input_adapter<__gnu_cxx::__normal_iterator > >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:10302:29: 2026-06-15T14:13:30,423 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2026-06-15T14:13:30,424 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:13:30,425 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:30,426 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {nlohmann::detail::value_t}; _Tp = nlohmann::basic_json; _Alloc = std::allocator >]’, 2026-06-15T14:13:30,426 inlined from ‘BasicJsonType* nlohmann::detail::json_sax_dom_parser::handle_value(Value&&) [with Value = nlohmann::detail::value_t; BasicJsonType = nlohmann::basic_json]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5479:58, 2026-06-15T14:13:30,427 inlined from ‘bool nlohmann::detail::json_sax_dom_parser::start_array(std::size_t) [with BasicJsonType = nlohmann::basic_json]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5423:41, 2026-06-15T14:13:30,429 inlined from ‘bool nlohmann::detail::parser::sax_parse_internal(SAX*) [with SAX = nlohmann::detail::json_sax_dom_parser >; BasicJsonType = nlohmann::basic_json; InputAdapterType = nlohmann::detail::iterator_input_adapter<__gnu_cxx::__normal_iterator > >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:10349:29: 2026-06-15T14:13:30,429 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2026-06-15T14:13:30,430 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:13:30,431 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:30,433 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long int&}; _Tp = nlohmann::basic_json; _Alloc = std::allocator >]’, 2026-06-15T14:13:30,434 inlined from ‘BasicJsonType* nlohmann::detail::json_sax_dom_parser::handle_value(Value&&) [with Value = long long int&; BasicJsonType = nlohmann::basic_json]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5479:58, 2026-06-15T14:13:30,435 inlined from ‘bool nlohmann::detail::json_sax_dom_parser::number_integer(number_integer_t) [with BasicJsonType = nlohmann::basic_json]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5367:21, 2026-06-15T14:13:30,436 inlined from ‘bool nlohmann::detail::parser::sax_parse_internal(SAX*) [with SAX = nlohmann::detail::json_sax_dom_parser >; BasicJsonType = nlohmann::basic_json; InputAdapterType = nlohmann::detail::iterator_input_adapter<__gnu_cxx::__normal_iterator > >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:10419:29: 2026-06-15T14:13:30,437 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2026-06-15T14:13:30,438 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:13:30,439 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:30,439 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >&}; _Tp = nlohmann::basic_json; _Alloc = std::allocator >]’, 2026-06-15T14:13:30,440 inlined from ‘BasicJsonType* nlohmann::detail::json_sax_dom_parser::handle_value(Value&&) [with Value = std::__cxx11::basic_string&; BasicJsonType = nlohmann::basic_json]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5479:58, 2026-06-15T14:13:30,441 inlined from ‘bool nlohmann::detail::json_sax_dom_parser::string(string_t&) [with BasicJsonType = nlohmann::basic_json]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5385:21, 2026-06-15T14:13:30,442 inlined from ‘bool nlohmann::detail::parser::sax_parse_internal(SAX*) [with SAX = nlohmann::detail::json_sax_dom_parser >; BasicJsonType = nlohmann::basic_json; InputAdapterType = nlohmann::detail::iterator_input_adapter<__gnu_cxx::__normal_iterator > >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:10428:29: 2026-06-15T14:13:30,444 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2026-06-15T14:13:30,445 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:13:30,446 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:30,447 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int&}; _Tp = nlohmann::basic_json; _Alloc = std::allocator >]’, 2026-06-15T14:13:30,476 inlined from ‘BasicJsonType* nlohmann::detail::json_sax_dom_parser::handle_value(Value&&) [with Value = long long unsigned int&; BasicJsonType = nlohmann::basic_json]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5479:58, 2026-06-15T14:13:30,477 inlined from ‘bool nlohmann::detail::json_sax_dom_parser::number_unsigned(number_unsigned_t) [with BasicJsonType = nlohmann::basic_json]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5373:21, 2026-06-15T14:13:30,478 inlined from ‘bool nlohmann::detail::parser::sax_parse_internal(SAX*) [with SAX = nlohmann::detail::json_sax_dom_parser >; BasicJsonType = nlohmann::basic_json; InputAdapterType = nlohmann::detail::iterator_input_adapter<__gnu_cxx::__normal_iterator > >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:10437:29: 2026-06-15T14:13:30,479 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2026-06-15T14:13:30,480 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:13:30,481 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:33,769 [ 82%] Building CXX object CMakeFiles/sonata_static.dir/src/version.cpp.o 2026-06-15T14:13:36,861 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2026-06-15T14:13:36,861 /usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:36,862 1908 | __introsort_loop(_RandomAccessIterator __first, 2026-06-15T14:13:36,863 | ^~~~~~~~~~~~~~~~ 2026-06-15T14:13:36,864 /usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:36,865 /usr/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:36,866 1922 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); 2026-06-15T14:13:36,867 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:37,052 In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, 2026-06-15T14:13:37,053 inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]’ at /usr/include/c++/12/bits/stl_algo.h:4820:18, 2026-06-15T14:13:37,054 inlined from ‘std::vector bbp::sonata::bulk_read::sortAndMerge(const std::vector&, size_t, size_t) [with Range = std::array]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/read_bulk.hpp:79:14: 2026-06-15T14:13:37,055 /usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:37,056 1937 | std::__introsort_loop(__first, __last, 2026-06-15T14:13:37,057 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 2026-06-15T14:13:37,057 1938 | std::__lg(__last - __first) * 2, 2026-06-15T14:13:37,058 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:37,059 1939 | __comp); 2026-06-15T14:13:37,059 | ~~~~~~~ 2026-06-15T14:13:37,060 In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, 2026-06-15T14:13:37,061 inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/12/bits/stl_algo.h:1940:31, 2026-06-15T14:13:37,061 inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]’ at /usr/include/c++/12/bits/stl_algo.h:4820:18, 2026-06-15T14:13:37,062 inlined from ‘std::vector bbp::sonata::bulk_read::sortAndMerge(const std::vector&, size_t, size_t) [with Range = std::array]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/read_bulk.hpp:79:14: 2026-06-15T14:13:37,063 /usr/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:37,063 1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); 2026-06-15T14:13:37,064 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:37,065 /usr/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:37,066 1854 | std::__insertion_sort(__first, __last, __comp); 2026-06-15T14:13:37,067 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:37,068 In file included from /usr/include/c++/12/vector:64: 2026-06-15T14:13:37,069 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = std::array; _Alloc = std::allocator >]’, 2026-06-15T14:13:37,070 inlined from ‘std::vector bbp::sonata::bulk_read::sortAndMerge(const std::vector&, size_t, size_t) [with Range = std::array]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/read_bulk.hpp:89:18: 2026-06-15T14:13:37,070 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:37,071 1287 | _M_realloc_insert(end(), __x); 2026-06-15T14:13:37,072 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-06-15T14:13:37,073 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = std::array; _Alloc = std::allocator >]’, 2026-06-15T14:13:37,074 inlined from ‘std::vector bbp::sonata::bulk_read::sortAndMerge(const std::vector&, size_t, size_t) [with Range = std::array]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/read_bulk.hpp:99:26: 2026-06-15T14:13:37,075 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:37,076 1287 | _M_realloc_insert(end(), __x); 2026-06-15T14:13:37,076 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-06-15T14:13:37,180 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = std::array; _Alloc = std::allocator >]’, 2026-06-15T14:13:37,181 inlined from ‘std::back_insert_iterator<_Container>& std::back_insert_iterator<_Container>::operator=(const typename _Container::value_type&) [with _Container = std::vector >]’ at /usr/include/c++/12/bits/stl_iterator.h:735:22, 2026-06-15T14:13:37,182 inlined from ‘static _OI std::__copy_move::__copy_m(_II, _II, _OI) [with _II = const std::array*; _OI = std::back_insert_iterator > >]’ at /usr/include/c++/12/bits/stl_algobase.h:385:18, 2026-06-15T14:13:37,182 inlined from ‘_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const array*; _OI = back_insert_iterator > >]’ at /usr/include/c++/12/bits/stl_algobase.h:495:30, 2026-06-15T14:13:37,183 inlined from ‘_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const array*; _OI = back_insert_iterator > >]’ at /usr/include/c++/12/bits/stl_algobase.h:522:42, 2026-06-15T14:13:37,184 inlined from ‘_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator*, vector > >; _OI = back_insert_iterator > >]’ at /usr/include/c++/12/bits/stl_algobase.h:529:31, 2026-06-15T14:13:37,185 inlined from ‘_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator*, vector > >; _OI = back_insert_iterator > >]’ at /usr/include/c++/12/bits/stl_algobase.h:620:7, 2026-06-15T14:13:37,186 inlined from ‘bool bbp::sonata::Selection::contains(Value) const’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/selection.cpp:123:14: 2026-06-15T14:13:37,187 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:37,188 1287 | _M_realloc_insert(end(), __x); 2026-06-15T14:13:37,189 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-06-15T14:13:37,589 In file included from /usr/include/c++/12/vector:70, 2026-06-15T14:13:37,590 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/HighFive/include/highfive/H5PropertyList.hpp:11, 2026-06-15T14:13:37,591 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/HighFive/include/highfive/H5File.hpp:15, 2026-06-15T14:13:37,592 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/read_canonical_selection.hpp:3, 2026-06-15T14:13:37,593 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/hdf5_reader.hpp:3, 2026-06-15T14:13:37,593 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:1: 2026-06-15T14:13:37,594 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2026-06-15T14:13:37,595 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2026-06-15T14:13:37,596 439 | vector<_Tp, _Alloc>:: 2026-06-15T14:13:37,597 | ^~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:37,671 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’, 2026-06-15T14:13:37,672 inlined from ‘bbp::sonata::SpikeTimes bbp::sonata::SpikeReader::Population::getArrays(const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&) const’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:190:52: 2026-06-15T14:13:37,673 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2026-06-15T14:13:37,674 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:13:37,674 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:38,635 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const std::array&}; _Tp = std::array; _Alloc = std::allocator >]’: 2026-06-15T14:13:38,636 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2026-06-15T14:13:38,637 439 | vector<_Tp, _Alloc>:: 2026-06-15T14:13:38,638 | ^~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:38,727 In file included from /usr/include/c++/12/unordered_set:46, 2026-06-15T14:13:38,728 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:7: 2026-06-15T14:13:38,728 /usr/include/c++/12/bits/hashtable.h: In constructor ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _Hash, _RangeHash, _Unused, _RehashPolicy, _Traits>::_Hashtable(_InputIterator, _InputIterator, size_type, const _Hash&, const _Equal&, const allocator_type&, std::true_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Key = long long unsigned int; _Value = long long unsigned int; _Alloc = std::allocator; _ExtractKey = std::__detail::_Identity; _Equal = std::equal_to; _Hash = std::hash; _RangeHash = std::__detail::_Mod_range_hashing; _Unused = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: 2026-06-15T14:13:38,729 /usr/include/c++/12/bits/hashtable.h:1182:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:38,730 1182 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, 2026-06-15T14:13:38,731 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:38,732 1183 | _Hash, _RangeHash, _Unused, _RehashPolicy, _Traits>:: 2026-06-15T14:13:38,733 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:38,734 /usr/include/c++/12/bits/hashtable.h:1182:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:41,105 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {unsigned int&, double&}; _Tp = std::pair; _Alloc = std::allocator >]’: 2026-06-15T14:13:41,106 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2026-06-15T14:13:41,107 439 | vector<_Tp, _Alloc>:: 2026-06-15T14:13:41,108 | ^~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:42,370 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/include/bbp/sonata/selection.h: In static member function ‘static bbp::sonata::Selection bbp::sonata::Selection::fromValues(Iterator, Iterator) [with Iterator = __gnu_cxx::__normal_iterator >]’: 2026-06-15T14:13:42,371 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/include/bbp/sonata/selection.h:65:11: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:42,371 65 | Selection Selection::fromValues(Iterator first, Iterator last) { 2026-06-15T14:13:42,372 | ^~~~~~~~~ 2026-06-15T14:13:42,373 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/include/bbp/sonata/selection.h:65:11: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:42,374 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = std::array; _Alloc = std::allocator >]’, 2026-06-15T14:13:42,375 inlined from ‘static bbp::sonata::Selection bbp::sonata::Selection::fromValues(Iterator, Iterator) [with Iterator = __gnu_cxx::__normal_iterator >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/include/bbp/sonata/selection.h:75:33: 2026-06-15T14:13:42,376 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:42,377 1287 | _M_realloc_insert(end(), __x); 2026-06-15T14:13:42,378 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-06-15T14:13:42,378 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = std::array; _Alloc = std::allocator >]’, 2026-06-15T14:13:42,379 inlined from ‘static bbp::sonata::Selection bbp::sonata::Selection::fromValues(Iterator, Iterator) [with Iterator = __gnu_cxx::__normal_iterator >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/include/bbp/sonata/selection.h:84:25: 2026-06-15T14:13:42,380 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:42,381 1287 | _M_realloc_insert(end(), __x); 2026-06-15T14:13:42,382 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-06-15T14:13:42,407 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/selection.cpp: In static member function ‘static bbp::sonata::Selection bbp::sonata::Selection::fromValues(const Values&)’: 2026-06-15T14:13:42,408 /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/selection.cpp:71:51: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:42,409 71 | return fromValues(values.begin(), values.end()); 2026-06-15T14:13:42,410 | ^ 2026-06-15T14:13:42,438 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = std::array; _Alloc = std::allocator >]’, 2026-06-15T14:13:42,439 inlined from ‘std::back_insert_iterator<_Container>& std::back_insert_iterator<_Container>::operator=(const typename _Container::value_type&) [with _Container = std::vector >]’ at /usr/include/c++/12/bits/stl_iterator.h:735:22, 2026-06-15T14:13:42,440 inlined from ‘static _OI std::__copy_move::__copy_m(_II, _II, _OI) [with _II = const std::array*; _OI = std::back_insert_iterator > >]’ at /usr/include/c++/12/bits/stl_algobase.h:385:18, 2026-06-15T14:13:42,440 inlined from ‘_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const array*; _OI = back_insert_iterator > >]’ at /usr/include/c++/12/bits/stl_algobase.h:495:30, 2026-06-15T14:13:42,441 inlined from ‘_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const array*; _OI = back_insert_iterator > >]’ at /usr/include/c++/12/bits/stl_algobase.h:522:42, 2026-06-15T14:13:42,442 inlined from ‘_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator*, vector > >; _OI = back_insert_iterator > >]’ at /usr/include/c++/12/bits/stl_algobase.h:529:31, 2026-06-15T14:13:42,443 inlined from ‘_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator*, vector > >; _OI = back_insert_iterator > >]’ at /usr/include/c++/12/bits/stl_algobase.h:620:7, 2026-06-15T14:13:42,444 inlined from ‘bbp::sonata::Selection bbp::sonata::detail::union_(const Ranges&, const Ranges&)’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/selection.cpp:57:14: 2026-06-15T14:13:42,445 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:42,446 1287 | _M_realloc_insert(end(), __x); 2026-06-15T14:13:42,447 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-06-15T14:13:42,448 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = std::array; _Alloc = std::allocator >]’, 2026-06-15T14:13:42,449 inlined from ‘std::back_insert_iterator<_Container>& std::back_insert_iterator<_Container>::operator=(const typename _Container::value_type&) [with _Container = std::vector >]’ at /usr/include/c++/12/bits/stl_iterator.h:735:22, 2026-06-15T14:13:42,450 inlined from ‘static _OI std::__copy_move::__copy_m(_II, _II, _OI) [with _II = const std::array*; _OI = std::back_insert_iterator > >]’ at /usr/include/c++/12/bits/stl_algobase.h:385:18, 2026-06-15T14:13:42,451 inlined from ‘_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const array*; _OI = back_insert_iterator > >]’ at /usr/include/c++/12/bits/stl_algobase.h:495:30, 2026-06-15T14:13:42,452 inlined from ‘_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const array*; _OI = back_insert_iterator > >]’ at /usr/include/c++/12/bits/stl_algobase.h:522:42, 2026-06-15T14:13:42,453 inlined from ‘_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator*, vector > >; _OI = back_insert_iterator > >]’ at /usr/include/c++/12/bits/stl_algobase.h:529:31, 2026-06-15T14:13:42,453 inlined from ‘_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator*, vector > >; _OI = back_insert_iterator > >]’ at /usr/include/c++/12/bits/stl_algobase.h:620:7, 2026-06-15T14:13:42,454 inlined from ‘bbp::sonata::Selection bbp::sonata::detail::union_(const Ranges&, const Ranges&)’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/selection.cpp:58:14: 2026-06-15T14:13:42,455 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:42,456 1287 | _M_realloc_insert(end(), __x); 2026-06-15T14:13:42,456 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-06-15T14:13:42,511 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::array}; _Tp = std::array; _Alloc = std::allocator >]’, 2026-06-15T14:13:42,511 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = std::array; _Alloc = std::allocator >]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2026-06-15T14:13:42,512 inlined from ‘bbp::sonata::Selection bbp::sonata::detail::intersection_(const Ranges&, const Ranges&)’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/selection.cpp:42:26: 2026-06-15T14:13:42,513 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:42,514 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:13:42,515 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:42,759 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {std::array}; _Tp = std::array; _Alloc = std::allocator >]’: 2026-06-15T14:13:42,760 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2026-06-15T14:13:42,787 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::array}; _Tp = std::array; _Alloc = std::allocator >]’: 2026-06-15T14:13:42,788 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:42,789 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:13:42,790 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:43,589 In constructor ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _Hash, _RangeHash, _Unused, _RehashPolicy, _Traits>::_Hashtable(_InputIterator, _InputIterator, size_type, const _Hash&, const key_equal&, const allocator_type&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Key = long long unsigned int; _Value = long long unsigned int; _Alloc = std::allocator; _ExtractKey = std::__detail::_Identity; _Equal = std::equal_to; _Hash = std::hash; _RangeHash = std::__detail::_Mod_range_hashing; _Unused = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’, 2026-06-15T14:13:43,589 inlined from ‘std::unordered_set<_Value, _Hash, _Pred, _Alloc>::unordered_set(_InputIterator, _InputIterator, size_type, const hasher&, const key_equal&, const allocator_type&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Value = long long unsigned int; _Hash = std::hash; _Pred = std::equal_to; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/unordered_set.h:171:4, 2026-06-15T14:13:43,590 inlined from ‘void {anonymous}::filterNodeIDUnsorted(bbp::sonata::Spikes&, const bbp::sonata::Selection&)’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:32:99, 2026-06-15T14:13:43,591 inlined from ‘void bbp::sonata::SpikeReader::Population::filterNode(bbp::sonata::Spikes&, const bbp::sonata::Selection&) const’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:239:29: 2026-06-15T14:13:43,591 /usr/include/c++/12/bits/hashtable.h:569:37: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:43,592 569 | __unique_keys{}) 2026-06-15T14:13:43,593 | ^ 2026-06-15T14:13:43,981 In file included from /usr/include/c++/12/algorithm:61, 2026-06-15T14:13:43,982 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/HighFive/include/highfive/bits/../bits/H5Utils.hpp:12, 2026-06-15T14:13:43,983 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/HighFive/include/highfive/bits/../H5DataType.hpp:17, 2026-06-15T14:13:43,984 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/HighFive/include/highfive/bits/../H5Attribute.hpp:15, 2026-06-15T14:13:43,984 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/HighFive/include/highfive/bits/H5Annotate_traits.hpp:13, 2026-06-15T14:13:43,985 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/HighFive/include/highfive/H5File.hpp:16: 2026-06-15T14:13:43,986 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::Population::Population(const HighFive::File&, const std::string&):: >]’: 2026-06-15T14:13:43,986 /usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:43,987 1802 | __insertion_sort(_RandomAccessIterator __first, 2026-06-15T14:13:43,988 | ^~~~~~~~~~~~~~~~ 2026-06-15T14:13:43,989 /usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:44,025 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::Population::getNodeIdElementLayout(const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&) const:: >]’: 2026-06-15T14:13:44,026 /usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:44,027 /usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:44,064 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >::Population::Population(const HighFive::File&, const std::string&):: >]’: 2026-06-15T14:13:44,065 /usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:44,066 /usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:44,104 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >::Population::getNodeIdElementLayout(const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&) const:: >]’: 2026-06-15T14:13:44,105 /usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:44,106 /usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:49,880 In file included from /usr/include/c++/12/vector:70, 2026-06-15T14:13:49,881 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/utils.h:16, 2026-06-15T14:13:49,882 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/utils.cpp:10: 2026-06-15T14:13:49,882 /usr/include/c++/12/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’: 2026-06-15T14:13:49,883 /usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ changed in GCC 7.1 2026-06-15T14:13:49,884 175 | vector<_Tp, _Alloc>:: 2026-06-15T14:13:49,885 | ^~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:49,925 In file included from /usr/include/c++/12/vector:64: 2026-06-15T14:13:49,925 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’, 2026-06-15T14:13:49,927 inlined from ‘IteratorType nlohmann::basic_json::erase(IteratorType) [with IteratorType = nlohmann::detail::iter_impl >; typename std::enable_if<(std::is_same > >::value || std::is_same > >::value), int>::type = 0; ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer; BinaryType = std::vector >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:20568:66: 2026-06-15T14:13:49,927 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2026-06-15T14:13:49,928 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2026-06-15T14:13:49,929 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:50,083 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {nlohmann::detail::value_t}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’: 2026-06-15T14:13:50,084 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ changed in GCC 7.1 2026-06-15T14:13:50,085 439 | vector<_Tp, _Alloc>:: 2026-06-15T14:13:50,086 | ^~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:50,173 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {long long int&}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’: 2026-06-15T14:13:50,173 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ changed in GCC 7.1 2026-06-15T14:13:50,214 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >&}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’: 2026-06-15T14:13:50,214 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ changed in GCC 7.1 2026-06-15T14:13:50,260 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {long long unsigned int&}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’: 2026-06-15T14:13:50,261 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ changed in GCC 7.1 2026-06-15T14:13:52,760 In file included from /usr/include/c++/12/set:60, 2026-06-15T14:13:52,761 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/utils.h:14: 2026-06-15T14:13:52,762 /usr/include/c++/12/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, nlohmann::basic_json<> >; _KeyOfValue = std::_Select1st, nlohmann::basic_json<> > >; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’: 2026-06-15T14:13:52,762 /usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, nlohmann::basic_json<> >, std::_Select1st, nlohmann::basic_json<> > >, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’ changed in GCC 7.1 2026-06-15T14:13:52,763 2457 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2026-06-15T14:13:52,764 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:52,854 In file included from /usr/include/c++/12/map:61, 2026-06-15T14:13:52,854 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:61, 2026-06-15T14:13:52,855 from /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/utils.h:19: 2026-06-15T14:13:52,856 In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = nlohmann::basic_json<>; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’, 2026-06-15T14:13:52,857 inlined from ‘bool nlohmann::detail::json_sax_dom_callback_parser::key(string_t&) [with BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5599:76: 2026-06-15T14:13:52,858 /usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, nlohmann::basic_json<> >, std::_Select1st, nlohmann::basic_json<> > >, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’ changed in GCC 7.1 2026-06-15T14:13:52,858 511 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2026-06-15T14:13:52,859 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:52,860 512 | std::tuple(__k), 2026-06-15T14:13:52,861 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:52,861 513 | std::tuple<>()); 2026-06-15T14:13:52,862 | ~~~~~~~~~~~~~~~ 2026-06-15T14:13:54,661 In file included from /usr/include/c++/12/bits/stl_algo.h:60: 2026-06-15T14:13:54,662 /usr/include/c++/12/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::Population::Population(const HighFive::File&, const std::string&):: >]’: 2026-06-15T14:13:54,662 /usr/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:54,663 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, 2026-06-15T14:13:54,664 | ^~~~~~~~~~~~~ 2026-06-15T14:13:54,739 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::Population::Population(const HighFive::File&, const std::string&):: >]’: 2026-06-15T14:13:54,740 /usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:54,741 1908 | __introsort_loop(_RandomAccessIterator __first, 2026-06-15T14:13:54,741 | ^~~~~~~~~~~~~~~~ 2026-06-15T14:13:54,742 /usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:54,743 /usr/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:54,744 1922 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); 2026-06-15T14:13:54,745 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:55,047 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::array}; _Tp = std::array; _Alloc = std::allocator >]’, 2026-06-15T14:13:55,047 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = std::array; _Alloc = std::allocator >]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2026-06-15T14:13:55,048 inlined from ‘bbp::sonata::ReportReader::Population::Population(const HighFive::File&, const std::string&) [with KeyType = long long unsigned int]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:287:31: 2026-06-15T14:13:55,049 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:55,050 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:13:55,051 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:55,052 In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::Population::Population(const HighFive::File&, const std::string&):: >]’, 2026-06-15T14:13:55,052 inlined from ‘void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = bbp::sonata::ReportReader::Population::Population(const HighFive::File&, const std::string&)::]’ at /usr/include/c++/12/bits/stl_algo.h:4853:18, 2026-06-15T14:13:55,053 inlined from ‘bbp::sonata::ReportReader::Population::Population(const HighFive::File&, const std::string&) [with KeyType = long long unsigned int]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:305:22: 2026-06-15T14:13:55,054 /usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:55,054 1937 | std::__introsort_loop(__first, __last, 2026-06-15T14:13:55,055 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 2026-06-15T14:13:55,055 1938 | std::__lg(__last - __first) * 2, 2026-06-15T14:13:55,056 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:55,057 1939 | __comp); 2026-06-15T14:13:55,058 | ~~~~~~~ 2026-06-15T14:13:55,059 In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::Population::Population(const HighFive::File&, const std::string&):: >]’, 2026-06-15T14:13:55,059 inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::Population::Population(const HighFive::File&, const std::string&):: >]’ at /usr/include/c++/12/bits/stl_algo.h:1940:31, 2026-06-15T14:13:55,060 inlined from ‘void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = bbp::sonata::ReportReader::Population::Population(const HighFive::File&, const std::string&)::]’ at /usr/include/c++/12/bits/stl_algo.h:4853:18, 2026-06-15T14:13:55,061 inlined from ‘bbp::sonata::ReportReader::Population::Population(const HighFive::File&, const std::string&) [with KeyType = long long unsigned int]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:305:22: 2026-06-15T14:13:55,062 /usr/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:55,063 1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); 2026-06-15T14:13:55,064 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:55,064 /usr/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:55,066 1854 | std::__insertion_sort(__first, __last, __comp); 2026-06-15T14:13:55,067 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:55,067 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {unsigned int&, double&}; _Tp = std::pair; _Alloc = std::allocator >]’, 2026-06-15T14:13:55,068 inlined from ‘bbp::sonata::ReportReader::Population::Population(const HighFive::File&, const std::string&) [with KeyType = long long unsigned int]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:320:38: 2026-06-15T14:13:55,069 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:55,070 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:13:55,070 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:55,670 /usr/include/c++/12/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::Population::getNodeIdElementLayout(const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&) const:: >]’: 2026-06-15T14:13:55,671 /usr/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:55,671 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, 2026-06-15T14:13:55,672 | ^~~~~~~~~~~~~ 2026-06-15T14:13:55,749 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::Population::getNodeIdElementLayout(const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&) const:: >]’: 2026-06-15T14:13:55,750 /usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:55,751 1908 | __introsort_loop(_RandomAccessIterator __first, 2026-06-15T14:13:55,751 | ^~~~~~~~~~~~~~~~ 2026-06-15T14:13:55,752 /usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:55,753 /usr/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:55,754 1922 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); 2026-06-15T14:13:55,755 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:56,016 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {const std::array&}; _Tp = std::array; _Alloc = std::allocator >]’, 2026-06-15T14:13:56,017 inlined from ‘bbp::sonata::ReportReader::Population::NodeIdElementLayout bbp::sonata::ReportReader::Population::getNodeIdElementLayout(const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&) const [with KeyType = long long unsigned int]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:390:48: 2026-06-15T14:13:56,018 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:56,018 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:13:56,019 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:56,020 In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::Population::getNodeIdElementLayout(const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&) const:: >]’, 2026-06-15T14:13:56,020 inlined from ‘void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = bbp::sonata::ReportReader::Population::getNodeIdElementLayout(const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&) const::]’ at /usr/include/c++/12/bits/stl_algo.h:4853:18, 2026-06-15T14:13:56,021 inlined from ‘bbp::sonata::ReportReader::Population::NodeIdElementLayout bbp::sonata::ReportReader::Population::getNodeIdElementLayout(const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&) const [with KeyType = long long unsigned int]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:404:18: 2026-06-15T14:13:56,022 /usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:56,022 1937 | std::__introsort_loop(__first, __last, 2026-06-15T14:13:56,023 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 2026-06-15T14:13:56,024 1938 | std::__lg(__last - __first) * 2, 2026-06-15T14:13:56,024 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:56,025 1939 | __comp); 2026-06-15T14:13:56,026 | ~~~~~~~ 2026-06-15T14:13:56,026 In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::Population::getNodeIdElementLayout(const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&) const:: >]’, 2026-06-15T14:13:56,027 inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter::Population::getNodeIdElementLayout(const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&) const:: >]’ at /usr/include/c++/12/bits/stl_algo.h:1940:31, 2026-06-15T14:13:56,028 inlined from ‘void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = bbp::sonata::ReportReader::Population::getNodeIdElementLayout(const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&) const::]’ at /usr/include/c++/12/bits/stl_algo.h:4853:18, 2026-06-15T14:13:56,029 inlined from ‘bbp::sonata::ReportReader::Population::NodeIdElementLayout bbp::sonata::ReportReader::Population::getNodeIdElementLayout(const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&) const [with KeyType = long long unsigned int]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:404:18: 2026-06-15T14:13:56,029 /usr/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:56,030 1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); 2026-06-15T14:13:56,031 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:56,031 /usr/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:56,032 1854 | std::__insertion_sort(__first, __last, __comp); 2026-06-15T14:13:56,032 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:56,033 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::array}; _Tp = std::array; _Alloc = std::allocator >]’, 2026-06-15T14:13:56,034 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = std::array; _Alloc = std::allocator >]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2026-06-15T14:13:56,035 inlined from ‘bbp::sonata::ReportReader::Population::NodeIdElementLayout bbp::sonata::ReportReader::Population::getNodeIdElementLayout(const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&) const [with KeyType = long long unsigned int]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:420:48: 2026-06-15T14:13:56,036 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:56,037 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:13:56,037 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:56,776 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’, 2026-06-15T14:13:56,777 inlined from ‘bbp::sonata::DataFrame bbp::sonata::ReportReader::Population::get(const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&) const [with KeyType = long long unsigned int]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:541:38: 2026-06-15T14:13:56,778 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2026-06-15T14:13:56,779 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:13:56,779 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:57,418 /usr/include/c++/12/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >::Population::Population(const HighFive::File&, const std::string&):: >]’: 2026-06-15T14:13:57,420 /usr/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:57,421 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, 2026-06-15T14:13:57,422 | ^~~~~~~~~~~~~ 2026-06-15T14:13:57,496 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >::Population::Population(const HighFive::File&, const std::string&):: >]’: 2026-06-15T14:13:57,497 /usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:57,498 1908 | __introsort_loop(_RandomAccessIterator __first, 2026-06-15T14:13:57,499 | ^~~~~~~~~~~~~~~~ 2026-06-15T14:13:57,500 /usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:57,501 /usr/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:57,502 1922 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); 2026-06-15T14:13:57,503 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:57,803 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::array}; _Tp = std::array; _Alloc = std::allocator >]’, 2026-06-15T14:13:57,804 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = std::array; _Alloc = std::allocator >]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2026-06-15T14:13:57,805 inlined from ‘bbp::sonata::ReportReader::Population::Population(const HighFive::File&, const std::string&) [with KeyType = std::array]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:287:31: 2026-06-15T14:13:57,806 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:57,807 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:13:57,808 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:57,809 In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >::Population::Population(const HighFive::File&, const std::string&):: >]’, 2026-06-15T14:13:57,810 inlined from ‘void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = bbp::sonata::ReportReader >::Population::Population(const HighFive::File&, const std::string&)::]’ at /usr/include/c++/12/bits/stl_algo.h:4853:18, 2026-06-15T14:13:57,810 inlined from ‘bbp::sonata::ReportReader::Population::Population(const HighFive::File&, const std::string&) [with KeyType = std::array]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:305:22: 2026-06-15T14:13:57,811 /usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:57,812 1937 | std::__introsort_loop(__first, __last, 2026-06-15T14:13:57,812 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 2026-06-15T14:13:57,813 1938 | std::__lg(__last - __first) * 2, 2026-06-15T14:13:57,814 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:57,815 1939 | __comp); 2026-06-15T14:13:57,816 | ~~~~~~~ 2026-06-15T14:13:57,817 In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >::Population::Population(const HighFive::File&, const std::string&):: >]’, 2026-06-15T14:13:57,818 inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >::Population::Population(const HighFive::File&, const std::string&):: >]’ at /usr/include/c++/12/bits/stl_algo.h:1940:31, 2026-06-15T14:13:57,819 inlined from ‘void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = bbp::sonata::ReportReader >::Population::Population(const HighFive::File&, const std::string&)::]’ at /usr/include/c++/12/bits/stl_algo.h:4853:18, 2026-06-15T14:13:57,819 inlined from ‘bbp::sonata::ReportReader::Population::Population(const HighFive::File&, const std::string&) [with KeyType = std::array]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:305:22: 2026-06-15T14:13:57,820 /usr/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:57,821 1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); 2026-06-15T14:13:57,822 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:57,823 /usr/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:57,823 1854 | std::__insertion_sort(__first, __last, __comp); 2026-06-15T14:13:57,824 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:57,825 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {unsigned int&, double&}; _Tp = std::pair; _Alloc = std::allocator >]’, 2026-06-15T14:13:57,825 inlined from ‘bbp::sonata::ReportReader::Population::Population(const HighFive::File&, const std::string&) [with KeyType = std::array]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:320:38: 2026-06-15T14:13:57,826 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:57,827 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:13:57,827 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:58,427 /usr/include/c++/12/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >::Population::getNodeIdElementLayout(const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&) const:: >]’: 2026-06-15T14:13:58,428 /usr/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:58,429 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, 2026-06-15T14:13:58,430 | ^~~~~~~~~~~~~ 2026-06-15T14:13:58,505 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >::Population::getNodeIdElementLayout(const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&) const:: >]’: 2026-06-15T14:13:58,506 /usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:58,507 1908 | __introsort_loop(_RandomAccessIterator __first, 2026-06-15T14:13:58,508 | ^~~~~~~~~~~~~~~~ 2026-06-15T14:13:58,509 /usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:58,510 /usr/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:58,510 1922 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); 2026-06-15T14:13:58,511 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:58,778 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {const std::array&}; _Tp = std::array; _Alloc = std::allocator >]’, 2026-06-15T14:13:58,779 inlined from ‘bbp::sonata::ReportReader::Population::NodeIdElementLayout bbp::sonata::ReportReader::Population::getNodeIdElementLayout(const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&) const [with KeyType = std::array]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:390:48: 2026-06-15T14:13:58,780 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:58,780 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:13:58,781 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:58,782 In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >::Population::getNodeIdElementLayout(const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&) const:: >]’, 2026-06-15T14:13:58,782 inlined from ‘void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = bbp::sonata::ReportReader >::Population::getNodeIdElementLayout(const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&) const::]’ at /usr/include/c++/12/bits/stl_algo.h:4853:18, 2026-06-15T14:13:58,783 inlined from ‘bbp::sonata::ReportReader::Population::NodeIdElementLayout bbp::sonata::ReportReader::Population::getNodeIdElementLayout(const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&) const [with KeyType = std::array]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:404:18: 2026-06-15T14:13:58,784 /usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:58,785 1937 | std::__introsort_loop(__first, __last, 2026-06-15T14:13:58,786 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 2026-06-15T14:13:58,786 1938 | std::__lg(__last - __first) * 2, 2026-06-15T14:13:58,787 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:58,788 1939 | __comp); 2026-06-15T14:13:58,789 | ~~~~~~~ 2026-06-15T14:13:58,790 In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >::Population::getNodeIdElementLayout(const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&) const:: >]’, 2026-06-15T14:13:58,790 inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >::Population::getNodeIdElementLayout(const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&) const:: >]’ at /usr/include/c++/12/bits/stl_algo.h:1940:31, 2026-06-15T14:13:58,791 inlined from ‘void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = bbp::sonata::ReportReader >::Population::getNodeIdElementLayout(const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&) const::]’ at /usr/include/c++/12/bits/stl_algo.h:4853:18, 2026-06-15T14:13:58,792 inlined from ‘bbp::sonata::ReportReader::Population::NodeIdElementLayout bbp::sonata::ReportReader::Population::getNodeIdElementLayout(const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&) const [with KeyType = std::array]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:404:18: 2026-06-15T14:13:58,792 /usr/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:58,793 1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); 2026-06-15T14:13:58,794 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:58,794 /usr/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-06-15T14:13:58,795 1854 | std::__insertion_sort(__first, __last, __comp); 2026-06-15T14:13:58,796 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:58,796 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::array}; _Tp = std::array; _Alloc = std::allocator >]’, 2026-06-15T14:13:58,797 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = std::array; _Alloc = std::allocator >]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2026-06-15T14:13:58,798 inlined from ‘bbp::sonata::ReportReader::Population::NodeIdElementLayout bbp::sonata::ReportReader::Population::getNodeIdElementLayout(const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&) const [with KeyType = std::array]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:420:48: 2026-06-15T14:13:58,799 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-06-15T14:13:58,800 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:13:58,800 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:59,552 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’, 2026-06-15T14:13:59,553 inlined from ‘bbp::sonata::DataFrame bbp::sonata::ReportReader::Population::get(const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&, const nonstd::optional_lite::optional&) const [with KeyType = std::array]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/src/report_reader.cpp:541:38: 2026-06-15T14:13:59,553 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2026-06-15T14:13:59,554 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:13:59,555 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:59,562 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {nlohmann::detail::value_t}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’, 2026-06-15T14:13:59,563 inlined from ‘BasicJsonType* nlohmann::detail::json_sax_dom_parser::handle_value(Value&&) [with Value = nlohmann::detail::value_t; BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5479:58, 2026-06-15T14:13:59,563 inlined from ‘bool nlohmann::detail::json_sax_dom_parser::start_object(std::size_t) [with BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5397:41, 2026-06-15T14:13:59,564 inlined from ‘bool nlohmann::detail::parser::sax_parse_internal(SAX*) [with SAX = nlohmann::detail::json_sax_dom_parser >; BasicJsonType = nlohmann::basic_json<>; InputAdapterType = nlohmann::detail::iterator_input_adapter<__gnu_cxx::__normal_iterator > >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:10302:29: 2026-06-15T14:13:59,565 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2026-06-15T14:13:59,566 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:13:59,566 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:59,567 In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = nlohmann::basic_json<>; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’, 2026-06-15T14:13:59,568 inlined from ‘bool nlohmann::detail::json_sax_dom_parser::key(string_t&) [with BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5411:72, 2026-06-15T14:13:59,568 inlined from ‘bool nlohmann::detail::parser::sax_parse_internal(SAX*) [with SAX = nlohmann::detail::json_sax_dom_parser >; BasicJsonType = nlohmann::basic_json<>; InputAdapterType = nlohmann::detail::iterator_input_adapter<__gnu_cxx::__normal_iterator > >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:10325:29: 2026-06-15T14:13:59,569 /usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, nlohmann::basic_json<> >, std::_Select1st, nlohmann::basic_json<> > >, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’ changed in GCC 7.1 2026-06-15T14:13:59,570 511 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2026-06-15T14:13:59,571 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:59,571 512 | std::tuple(__k), 2026-06-15T14:13:59,572 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:59,573 513 | std::tuple<>()); 2026-06-15T14:13:59,573 | ~~~~~~~~~~~~~~~ 2026-06-15T14:13:59,574 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {nlohmann::detail::value_t}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’, 2026-06-15T14:13:59,574 inlined from ‘BasicJsonType* nlohmann::detail::json_sax_dom_parser::handle_value(Value&&) [with Value = nlohmann::detail::value_t; BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5479:58, 2026-06-15T14:13:59,575 inlined from ‘bool nlohmann::detail::json_sax_dom_parser::start_array(std::size_t) [with BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5423:41, 2026-06-15T14:13:59,576 inlined from ‘bool nlohmann::detail::parser::sax_parse_internal(SAX*) [with SAX = nlohmann::detail::json_sax_dom_parser >; BasicJsonType = nlohmann::basic_json<>; InputAdapterType = nlohmann::detail::iterator_input_adapter<__gnu_cxx::__normal_iterator > >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:10349:29: 2026-06-15T14:13:59,576 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2026-06-15T14:13:59,577 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:13:59,578 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:59,579 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long int&}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’, 2026-06-15T14:13:59,579 inlined from ‘BasicJsonType* nlohmann::detail::json_sax_dom_parser::handle_value(Value&&) [with Value = long long int&; BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5479:58, 2026-06-15T14:13:59,580 inlined from ‘bool nlohmann::detail::json_sax_dom_parser::number_integer(number_integer_t) [with BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5367:21, 2026-06-15T14:13:59,581 inlined from ‘bool nlohmann::detail::parser::sax_parse_internal(SAX*) [with SAX = nlohmann::detail::json_sax_dom_parser >; BasicJsonType = nlohmann::basic_json<>; InputAdapterType = nlohmann::detail::iterator_input_adapter<__gnu_cxx::__normal_iterator > >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:10419:29: 2026-06-15T14:13:59,582 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2026-06-15T14:13:59,583 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:13:59,584 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:59,584 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >&}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’, 2026-06-15T14:13:59,585 inlined from ‘BasicJsonType* nlohmann::detail::json_sax_dom_parser::handle_value(Value&&) [with Value = std::__cxx11::basic_string&; BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5479:58, 2026-06-15T14:13:59,586 inlined from ‘bool nlohmann::detail::json_sax_dom_parser::string(string_t&) [with BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5385:21, 2026-06-15T14:13:59,586 inlined from ‘bool nlohmann::detail::parser::sax_parse_internal(SAX*) [with SAX = nlohmann::detail::json_sax_dom_parser >; BasicJsonType = nlohmann::basic_json<>; InputAdapterType = nlohmann::detail::iterator_input_adapter<__gnu_cxx::__normal_iterator > >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:10428:29: 2026-06-15T14:13:59,587 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2026-06-15T14:13:59,588 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:13:59,589 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:59,590 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int&}; _Tp = nlohmann::basic_json<>; _Alloc = std::allocator >]’, 2026-06-15T14:13:59,591 inlined from ‘BasicJsonType* nlohmann::detail::json_sax_dom_parser::handle_value(Value&&) [with Value = long long unsigned int&; BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5479:58, 2026-06-15T14:13:59,591 inlined from ‘bool nlohmann::detail::json_sax_dom_parser::number_unsigned(number_unsigned_t) [with BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5373:21, 2026-06-15T14:13:59,592 inlined from ‘bool nlohmann::detail::parser::sax_parse_internal(SAX*) [with SAX = nlohmann::detail::json_sax_dom_parser >; BasicJsonType = nlohmann::basic_json<>; InputAdapterType = nlohmann::detail::iterator_input_adapter<__gnu_cxx::__normal_iterator > >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:10437:29: 2026-06-15T14:13:59,593 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2026-06-15T14:13:59,594 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-06-15T14:13:59,595 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:59,595 In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = nlohmann::basic_json<>; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’, 2026-06-15T14:13:59,596 inlined from ‘bool nlohmann::detail::json_sax_dom_parser::key(string_t&) [with BasicJsonType = nlohmann::basic_json<>]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:5411:72, 2026-06-15T14:13:59,597 inlined from ‘bool nlohmann::detail::parser::sax_parse_internal(SAX*) [with SAX = nlohmann::detail::json_sax_dom_parser >; BasicJsonType = nlohmann::basic_json<>; InputAdapterType = nlohmann::detail::iterator_input_adapter<__gnu_cxx::__normal_iterator > >]’ at /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/extlib/nlohmann/nlohmann/json.hpp:10521:25: 2026-06-15T14:13:59,597 /usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, nlohmann::basic_json<> >, std::_Select1st, nlohmann::basic_json<> > >, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’ changed in GCC 7.1 2026-06-15T14:13:59,598 511 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2026-06-15T14:13:59,598 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:59,599 512 | std::tuple(__k), 2026-06-15T14:13:59,600 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-06-15T14:13:59,601 513 | std::tuple<>()); 2026-06-15T14:13:59,602 | ~~~~~~~~~~~~~~~ 2026-06-15T14:14:01,659 [ 88%] Linking CXX static library libsonata.a 2026-06-15T14:14:02,512 [ 88%] Built target sonata_static 2026-06-15T14:14:02,562 [ 94%] Building CXX object python/CMakeFiles/_libsonata.dir/bindings.cpp.o 2026-06-15T14:15:17,890 [100%] Linking CXX shared module /tmp/pip-wheel-opb2lu87/libsonata_d8fa81aef7c749bcad4e6dffda6163e3/build/lib.linux-armv7l-cpython-311/libsonata/_libsonata.cpython-311-arm-linux-gnueabihf.so 2026-06-15T14:15:50,713 [100%] Built target _libsonata 2026-06-15T14:15:50,758 installing to build/bdist.linux-armv7l/wheel 2026-06-15T14:15:50,759 running install 2026-06-15T14:15:50,781 running install_lib 2026-06-15T14:15:50,792 creating build/bdist.linux-armv7l/wheel 2026-06-15T14:15:50,793 creating build/bdist.linux-armv7l/wheel/libsonata 2026-06-15T14:15:50,795 copying build/lib.linux-armv7l-cpython-311/libsonata/__init__.py -> build/bdist.linux-armv7l/wheel/./libsonata 2026-06-15T14:15:50,797 copying build/lib.linux-armv7l-cpython-311/libsonata/_libsonata.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./libsonata 2026-06-15T14:15:50,832 running install_egg_info 2026-06-15T14:15:50,856 running egg_info 2026-06-15T14:15:50,865 writing python/libsonata.egg-info/PKG-INFO 2026-06-15T14:15:50,870 writing dependency_links to python/libsonata.egg-info/dependency_links.txt 2026-06-15T14:15:50,871 writing requirements to python/libsonata.egg-info/requires.txt 2026-06-15T14:15:50,872 writing top-level names to python/libsonata.egg-info/top_level.txt 2026-06-15T14:15:50,901 /tmp/pip-build-env-ymq92e38/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-06-15T14:15:50,901 return get_active_overrides().subprocess_timeout 2026-06-15T14:15:50,907 listing git files failed - pretending there aren't any 2026-06-15T14:15:50,912 reading manifest file 'python/libsonata.egg-info/SOURCES.txt' 2026-06-15T14:15:50,965 reading manifest template 'MANIFEST.in' 2026-06-15T14:15:51,037 adding license file 'COPYING' 2026-06-15T14:15:51,037 adding license file 'COPYING.LESSER' 2026-06-15T14:15:51,038 adding license file 'AUTHORS.txt' 2026-06-15T14:15:51,050 writing manifest file 'python/libsonata.egg-info/SOURCES.txt' 2026-06-15T14:15:51,052 Copying python/libsonata.egg-info to build/bdist.linux-armv7l/wheel/./libsonata-0.1.37-py3.11.egg-info 2026-06-15T14:15:51,064 running install_scripts 2026-06-15T14:15:51,112 creating build/bdist.linux-armv7l/wheel/libsonata-0.1.37.dist-info/WHEEL 2026-06-15T14:15:51,115 creating '/tmp/pip-wheel-bzm7s4ev/.tmp-2rex4_xi/libsonata-0.1.37-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-06-15T14:15:51,117 adding 'libsonata/__init__.py' 2026-06-15T14:15:51,499 adding 'libsonata/_libsonata.cpython-311-arm-linux-gnueabihf.so' 2026-06-15T14:15:51,518 adding 'libsonata-0.1.37.dist-info/licenses/AUTHORS.txt' 2026-06-15T14:15:51,524 adding 'libsonata-0.1.37.dist-info/licenses/COPYING' 2026-06-15T14:15:51,526 adding 'libsonata-0.1.37.dist-info/licenses/COPYING.LESSER' 2026-06-15T14:15:51,528 adding 'libsonata-0.1.37.dist-info/METADATA' 2026-06-15T14:15:51,529 adding 'libsonata-0.1.37.dist-info/WHEEL' 2026-06-15T14:15:51,530 adding 'libsonata-0.1.37.dist-info/top_level.txt' 2026-06-15T14:15:51,531 adding 'libsonata-0.1.37.dist-info/RECORD' 2026-06-15T14:15:51,541 removing build/bdist.linux-armv7l/wheel 2026-06-15T14:15:51,649 Building wheel for libsonata (pyproject.toml): finished with status 'done' 2026-06-15T14:15:51,670 Created wheel for libsonata: filename=libsonata-0.1.37-cp311-cp311-linux_armv7l.whl size=797416 sha256=5e9818f8e25f06004ff19ffabf02cc657373b8a19b074ac5fbcd3cf2f09f5ddf 2026-06-15T14:15:51,671 Stored in directory: /tmp/pip-ephem-wheel-cache-47gd0k7w/wheels/ec/4b/47/2c38add57c54aa05e6f0031f88b49a9254c2018716f0e94b02 2026-06-15T14:15:51,686 Successfully built libsonata 2026-06-15T14:15:51,707 Removed build tracker: '/tmp/pip-build-tracker-uhpg2pt7'