2026-06-17T18:17:46,987 Created temporary directory: /tmp/pip-ephem-wheel-cache-_rhk2soq 2026-06-17T18:17:46,989 Created temporary directory: /tmp/pip-build-tracker-v266dx30 2026-06-17T18:17:46,990 Initialized build tracking at /tmp/pip-build-tracker-v266dx30 2026-06-17T18:17:46,990 Created build tracker: /tmp/pip-build-tracker-v266dx30 2026-06-17T18:17:46,990 Entered build tracker: /tmp/pip-build-tracker-v266dx30 2026-06-17T18:17:46,991 Created temporary directory: /tmp/pip-wheel-q6ddimgw 2026-06-17T18:17:46,994 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-06-17T18:17:46,997 Created temporary directory: /tmp/pip-ephem-wheel-cache-4s6qh9ka 2026-06-17T18:17:47,021 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-06-17T18:17:47,024 2 location(s) to search for versions of vivarium-engine: 2026-06-17T18:17:47,024 * https://pypi.org/simple/vivarium-engine/ 2026-06-17T18:17:47,024 * https://www.piwheels.org/simple/vivarium-engine/ 2026-06-17T18:17:47,025 Fetching project page and analyzing links: https://pypi.org/simple/vivarium-engine/ 2026-06-17T18:17:47,026 Getting page https://pypi.org/simple/vivarium-engine/ 2026-06-17T18:17:47,027 Found index url https://pypi.org/simple 2026-06-17T18:17:47,353 Fetched page https://pypi.org/simple/vivarium-engine/ as application/vnd.pypi.simple.v1+json 2026-06-17T18:17:47,358 Skipping link: No binaries permitted for vivarium-engine: https://files.pythonhosted.org/packages/f5/9b/0d5cb8e052b7a5e87054378ea60d3e22621ad35e5fc58ca649cd1e0afee1/vivarium_engine-5.0.0-py3-none-any.whl (from https://pypi.org/simple/vivarium-engine/) (requires-python:>=3.10) 2026-06-17T18:17:47,359 Found link https://files.pythonhosted.org/packages/fb/00/8eeaae4ba6ffcebc9ab23acbb50132b73221e138342e491942bc79aaa9e9/vivarium_engine-5.0.0.tar.gz (from https://pypi.org/simple/vivarium-engine/) (requires-python:>=3.10), version: 5.0.0 2026-06-17T18:17:47,360 Skipping link: No binaries permitted for vivarium-engine: https://files.pythonhosted.org/packages/e1/4b/00ab98164578a39691dbf0e58b0b24ebfac015f45aca7e72d3d1d7145752/vivarium_engine-5.0.1-py3-none-any.whl (from https://pypi.org/simple/vivarium-engine/) (requires-python:>=3.10) 2026-06-17T18:17:47,361 Found link https://files.pythonhosted.org/packages/1f/b4/06f4bb062c61aadfc7998964d0c16456d2cdbfa5db71cb6724cf2e4edcb9/vivarium_engine-5.0.1.tar.gz (from https://pypi.org/simple/vivarium-engine/) (requires-python:>=3.10), version: 5.0.1 2026-06-17T18:17:47,362 Skipping link: No binaries permitted for vivarium-engine: https://files.pythonhosted.org/packages/5b/ef/053daa6322b5d15483115445fff4ed68082d52a4fa8465a223704af6e0f6/vivarium_engine-5.0.2-py3-none-any.whl (from https://pypi.org/simple/vivarium-engine/) (requires-python:>=3.10) 2026-06-17T18:17:47,363 Found link https://files.pythonhosted.org/packages/0f/d6/295b3169329175d10facfd05665ecadae1d66930a48e88ac8aec0cc0a563/vivarium_engine-5.0.2.tar.gz (from https://pypi.org/simple/vivarium-engine/) (requires-python:>=3.10), version: 5.0.2 2026-06-17T18:17:47,363 Skipping link: No binaries permitted for vivarium-engine: https://files.pythonhosted.org/packages/63/df/c936271de14185f2196b65033837fa7fcb99fd9e7c9b59cb29fa89c04294/vivarium_engine-5.0.3-py3-none-any.whl (from https://pypi.org/simple/vivarium-engine/) (requires-python:>=3.10) 2026-06-17T18:17:47,364 Found link https://files.pythonhosted.org/packages/6d/c7/f6f547c94a0cc2fd85f61d7532298911012a924e02c715c42d7d1aa95304/vivarium_engine-5.0.3.tar.gz (from https://pypi.org/simple/vivarium-engine/) (requires-python:>=3.10), version: 5.0.3 2026-06-17T18:17:47,365 Skipping link: No binaries permitted for vivarium-engine: https://files.pythonhosted.org/packages/6c/4a/5f620e0875306a1a08e7a8704fc6514eefbf8645f6c2a7e9cd7543391301/vivarium_engine-5.1.0-py3-none-any.whl (from https://pypi.org/simple/vivarium-engine/) (requires-python:>=3.10) 2026-06-17T18:17:47,366 Found link https://files.pythonhosted.org/packages/b6/ef/fe30eeb5143e96ce13cf9c69606a91ae880ed88e791228579c5303d518c0/vivarium_engine-5.1.0.tar.gz (from https://pypi.org/simple/vivarium-engine/) (requires-python:>=3.10), version: 5.1.0 2026-06-17T18:17:47,367 Skipping link: No binaries permitted for vivarium-engine: https://files.pythonhosted.org/packages/b3/c1/e06acb42f97213aa5ee1d345f2aac1652f58e2f86fba2dfdcbd7aef02930/vivarium_engine-5.1.1-py3-none-any.whl (from https://pypi.org/simple/vivarium-engine/) (requires-python:>=3.10) 2026-06-17T18:17:47,368 Found link https://files.pythonhosted.org/packages/22/47/3f7b49fb46430028ab54516f9d8073ef5814a9590e5fabd125624d06078e/vivarium_engine-5.1.1.tar.gz (from https://pypi.org/simple/vivarium-engine/) (requires-python:>=3.10), version: 5.1.1 2026-06-17T18:17:47,368 Skipping link: No binaries permitted for vivarium-engine: https://files.pythonhosted.org/packages/e4/a2/4794fd7410ca91fd882799b24e62e7f3c61aa8a329dbfc7785ea3c7ac94f/vivarium_engine-5.1.2-py3-none-any.whl (from https://pypi.org/simple/vivarium-engine/) (requires-python:>=3.10) 2026-06-17T18:17:47,369 Found link https://files.pythonhosted.org/packages/b7/36/f9a01bc8cfbf5d1a100607866c7997e15e623c7fa4ac6d0639c1d3d286de/vivarium_engine-5.1.2.tar.gz (from https://pypi.org/simple/vivarium-engine/) (requires-python:>=3.10), version: 5.1.2 2026-06-17T18:17:47,370 Skipping link: No binaries permitted for vivarium-engine: https://files.pythonhosted.org/packages/c3/f2/9093b596c7200b76c53a0af533879797c37e86384daead4d6c132fa91a7d/vivarium_engine-5.1.3-py3-none-any.whl (from https://pypi.org/simple/vivarium-engine/) (requires-python:>=3.10) 2026-06-17T18:17:47,371 Found link https://files.pythonhosted.org/packages/9d/06/9140048d162796864b66b94ce7afa55fad53b9b66c6e63c6875c6d2bda23/vivarium_engine-5.1.3.tar.gz (from https://pypi.org/simple/vivarium-engine/) (requires-python:>=3.10), version: 5.1.3 2026-06-17T18:17:47,371 Skipping link: No binaries permitted for vivarium-engine: https://files.pythonhosted.org/packages/3b/45/523b9adb9d21955b3226e4bf44d6c8a9146b1f4703af43ec98de3e07d028/vivarium_engine-5.1.4-py3-none-any.whl (from https://pypi.org/simple/vivarium-engine/) (requires-python:>=3.10) 2026-06-17T18:17:47,372 Found link https://files.pythonhosted.org/packages/ff/29/0b2b49b7c34567d5c5c348aa0794f07006ceea91de3080391330df1d2739/vivarium_engine-5.1.4.tar.gz (from https://pypi.org/simple/vivarium-engine/) (requires-python:>=3.10), version: 5.1.4 2026-06-17T18:17:47,373 Skipping link: No binaries permitted for vivarium-engine: https://files.pythonhosted.org/packages/ef/65/aa4b949850e8d78c68d0ffcd527c993ab32610bea0ab9fb82377a1dc7909/vivarium_engine-5.1.5-py3-none-any.whl (from https://pypi.org/simple/vivarium-engine/) (requires-python:>=3.10) 2026-06-17T18:17:47,374 Found link https://files.pythonhosted.org/packages/61/f8/b91ec35d35088ac6ef49c51f1d508b3306449738ed7578f502728d3f07e5/vivarium_engine-5.1.5.tar.gz (from https://pypi.org/simple/vivarium-engine/) (requires-python:>=3.10), version: 5.1.5 2026-06-17T18:17:47,375 Skipping link: No binaries permitted for vivarium-engine: https://files.pythonhosted.org/packages/a7/65/a481e1bc59af013f27d252fe52c6393c62b84d21c738f34d54385fdbc43d/vivarium_engine-5.1.6-py3-none-any.whl (from https://pypi.org/simple/vivarium-engine/) (requires-python:>=3.10) 2026-06-17T18:17:47,376 Found link https://files.pythonhosted.org/packages/3f/96/1d78de3cc12cfad768a5614064d0154cfc437f813e097fd78417c55e0cfc/vivarium_engine-5.1.6.tar.gz (from https://pypi.org/simple/vivarium-engine/) (requires-python:>=3.10), version: 5.1.6 2026-06-17T18:17:47,377 Fetching project page and analyzing links: https://www.piwheels.org/simple/vivarium-engine/ 2026-06-17T18:17:47,377 Getting page https://www.piwheels.org/simple/vivarium-engine/ 2026-06-17T18:17:47,379 Found index url https://www.piwheels.org/simple 2026-06-17T18:17:47,654 Fetched page https://www.piwheels.org/simple/vivarium-engine/ as text/html 2026-06-17T18:17:47,659 Skipping link: No binaries permitted for vivarium-engine: https://www.piwheels.org/simple/vivarium-engine/vivarium_engine-5.1.5-py3-none-any.whl#sha256=97b5f8cc661a49e75916a229d6ff3762a080d00b66eca916279e467fda01944b (from https://www.piwheels.org/simple/vivarium-engine/) (requires-python:>=3.10) 2026-06-17T18:17:47,659 Skipping link: No binaries permitted for vivarium-engine: https://www.piwheels.org/simple/vivarium-engine/vivarium_engine-5.1.4-py3-none-any.whl#sha256=4fd967a83b300b140a2d78b35cbd28480173068f9aff5ad570af623b73b147b8 (from https://www.piwheels.org/simple/vivarium-engine/) (requires-python:>=3.10) 2026-06-17T18:17:47,660 Skipping link: No binaries permitted for vivarium-engine: https://www.piwheels.org/simple/vivarium-engine/vivarium_engine-5.1.3-py3-none-any.whl#sha256=d67f34efe60d928ea76d9fb3e329f97c1f624cc05037d5c292d18696a4381dcf (from https://www.piwheels.org/simple/vivarium-engine/) (requires-python:>=3.10) 2026-06-17T18:17:47,660 Skipping link: No binaries permitted for vivarium-engine: https://www.piwheels.org/simple/vivarium-engine/vivarium_engine-5.1.2-py3-none-any.whl#sha256=10d0340d63054aaa21f457ecc26a627884a0e12a7b0e2987ff9d4ac29cba0ba6 (from https://www.piwheels.org/simple/vivarium-engine/) (requires-python:>=3.10) 2026-06-17T18:17:47,661 Skipping link: No binaries permitted for vivarium-engine: https://www.piwheels.org/simple/vivarium-engine/vivarium_engine-5.1.1-py3-none-any.whl#sha256=cc942051abeec4fa110b6905bb65e942b4848744c9f4ec65baeecbc7e8c5a87b (from https://www.piwheels.org/simple/vivarium-engine/) (requires-python:>=3.10) 2026-06-17T18:17:47,661 Skipping link: No binaries permitted for vivarium-engine: https://www.piwheels.org/simple/vivarium-engine/vivarium_engine-5.1.0-py3-none-any.whl#sha256=9e0de6959d50e8142376161bc96881070a84d2009171eab65ac99f328236023f (from https://www.piwheels.org/simple/vivarium-engine/) (requires-python:>=3.10) 2026-06-17T18:17:47,662 Skipping link: No binaries permitted for vivarium-engine: https://www.piwheels.org/simple/vivarium-engine/vivarium_engine-5.0.3-py3-none-any.whl#sha256=aadb240db23b3ee068e77e6c3d8bdc0ed4eef905e03796a9f4100f8a68844029 (from https://www.piwheels.org/simple/vivarium-engine/) (requires-python:>=3.10) 2026-06-17T18:17:47,662 Skipping link: No binaries permitted for vivarium-engine: https://www.piwheels.org/simple/vivarium-engine/vivarium_engine-5.0.2-py3-none-any.whl#sha256=7c66858d8ff5243457bdb786bf7af28043af67f70d3579d52477af2a91cb0b00 (from https://www.piwheels.org/simple/vivarium-engine/) (requires-python:>=3.10) 2026-06-17T18:17:47,663 Skipping link: No binaries permitted for vivarium-engine: https://www.piwheels.org/simple/vivarium-engine/vivarium_engine-5.0.1-py3-none-any.whl#sha256=8c844b458c4ad1a04f25af324af3c027fce8d5126ac8513e22f77386c8e5463a (from https://www.piwheels.org/simple/vivarium-engine/) (requires-python:>=3.10) 2026-06-17T18:17:47,664 Skipping link: No binaries permitted for vivarium-engine: https://www.piwheels.org/simple/vivarium-engine/vivarium_engine-5.0.0-py3-none-any.whl#sha256=3ba1d9a3efd6e4f7ed6c9c10c47d29d342a10c8ad836b378138d4e336eec0d0c (from https://www.piwheels.org/simple/vivarium-engine/) (requires-python:>=3.10) 2026-06-17T18:17:47,664 Skipping link: not a file: https://www.piwheels.org/simple/vivarium-engine/ 2026-06-17T18:17:47,665 Skipping link: not a file: https://pypi.org/simple/vivarium-engine/ 2026-06-17T18:17:47,684 Given no hashes to check 1 links for project 'vivarium-engine': discarding no candidates 2026-06-17T18:17:47,702 Collecting vivarium-engine==5.1.6 2026-06-17T18:17:47,704 Created temporary directory: /tmp/pip-unpack-mbzzfsxm 2026-06-17T18:17:48,033 Downloading vivarium_engine-5.1.6.tar.gz (7.2 MB) 2026-06-17T18:17:49,675 Added vivarium-engine==5.1.6 from https://files.pythonhosted.org/packages/3f/96/1d78de3cc12cfad768a5614064d0154cfc437f813e097fd78417c55e0cfc/vivarium_engine-5.1.6.tar.gz to build tracker '/tmp/pip-build-tracker-v266dx30' 2026-06-17T18:17:49,683 Created temporary directory: /tmp/pip-build-env-3lu3mue8 2026-06-17T18:17:49,688 Installing build dependencies: started 2026-06-17T18:17:49,689 Running command pip subprocess to install build dependencies 2026-06-17T18:17:50,865 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-06-17T18:17:51,290 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-06-17T18:17:51,314 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-06-17T18:17:53,315 Collecting setuptools>=61.0 2026-06-17T18:17:53,316 Obtaining dependency information for setuptools>=61.0 from https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl.metadata 2026-06-17T18:17:53,331 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl.metadata (6.5 kB) 2026-06-17T18:17:53,673 Collecting setuptools_scm[toml]>=8.0 2026-06-17T18:17:53,675 Obtaining dependency information for setuptools_scm[toml]>=8.0 from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl.metadata 2026-06-17T18:17:53,689 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl.metadata (6.5 kB) 2026-06-17T18:17:53,700 Discarding https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl#sha256=600c37b3fea2bb517f59d76792adae856d0b5ce7735b186e4cde804375251321 (from https://www.piwheels.org/simple/setuptools-scm/) (requires-python:>=3.10): Requested setuptools_scm>=8.0 from https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-10.0.5-py3-none-any.whl#sha256=600c37b3fea2bb517f59d76792adae856d0b5ce7735b186e4cde804375251321 has inconsistent Name: expected 'setuptools_scm', but metadata has 'setuptools-scm' 2026-06-17T18:17:53,723 Using cached setuptools_scm-10.0.5-py3-none-any.whl (21 kB) 2026-06-17T18:17:53,811 Collecting vcs-versioning>=1.0.0.dev0 2026-06-17T18:17:53,812 Obtaining dependency information for vcs-versioning>=1.0.0.dev0 from https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl.metadata 2026-06-17T18:17:53,827 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl.metadata (1.6 kB) 2026-06-17T18:17:54,008 Collecting packaging>=20 2026-06-17T18:17:54,010 Obtaining dependency information for packaging>=20 from https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata 2026-06-17T18:17:54,024 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata (3.5 kB) 2026-06-17T18:17:54,246 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB) 2026-06-17T18:17:54,268 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl (79 kB) 2026-06-17T18:17:54,362 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-06-17T18:17:54,397 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB) 2026-06-17T18:17:54,424 Using cached https://www.piwheels.org/simple/vcs-versioning/vcs_versioning-1.1.1-py3-none-any.whl (79 kB) 2026-06-17T18:17:54,508 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-06-17T18:17:57,262 Installing collected packages: setuptools, packaging, vcs-versioning, setuptools_scm 2026-06-17T18:18:00,909 Creating /tmp/pip-build-env-3lu3mue8/overlay/local/bin 2026-06-17T18:18:00,911 changing mode of /tmp/pip-build-env-3lu3mue8/overlay/local/bin/vcs-versioning to 755 2026-06-17T18:18:01,024 changing mode of /tmp/pip-build-env-3lu3mue8/overlay/local/bin/setuptools-scm to 755 2026-06-17T18:18:01,052 Successfully installed packaging-26.2 setuptools-82.0.1 setuptools_scm-10.0.5 vcs-versioning-1.1.1 2026-06-17T18:18:01,349 Installing build dependencies: finished with status 'done' 2026-06-17T18:18:01,355 Getting requirements to build wheel: started 2026-06-17T18:18:01,356 Running command Getting requirements to build wheel 2026-06-17T18:18:02,086 /tmp/pip-build-env-3lu3mue8/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-06-17T18:18:02,086 !! 2026-06-17T18:18:02,087 ******************************************************************************** 2026-06-17T18:18:02,088 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-06-17T18:18:02,089 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-06-17T18:18:02,089 or your builds will no longer be supported. 2026-06-17T18:18:02,090 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-06-17T18:18:02,090 ******************************************************************************** 2026-06-17T18:18:02,091 !! 2026-06-17T18:18:02,092 corresp(dist, value, root_dir) 2026-06-17T18:18:02,166 /tmp/pip-build-env-3lu3mue8/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-06-17T18:18:02,167 !! 2026-06-17T18:18:02,168 ******************************************************************************** 2026-06-17T18:18:02,168 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-06-17T18:18:02,169 License :: OSI Approved :: BSD License 2026-06-17T18:18:02,170 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-06-17T18:18:02,171 ******************************************************************************** 2026-06-17T18:18:02,172 !! 2026-06-17T18:18:02,173 dist._finalize_license_expression() 2026-06-17T18:18:02,174 /tmp/pip-build-env-3lu3mue8/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-06-17T18:18:02,174 !! 2026-06-17T18:18:02,175 ******************************************************************************** 2026-06-17T18:18:02,176 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-06-17T18:18:02,177 License :: OSI Approved :: BSD License 2026-06-17T18:18:02,178 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-06-17T18:18:02,179 ******************************************************************************** 2026-06-17T18:18:02,180 !! 2026-06-17T18:18:02,181 self._finalize_license_expression() 2026-06-17T18:18:02,183 running egg_info 2026-06-17T18:18:02,191 writing src/vivarium_engine.egg-info/PKG-INFO 2026-06-17T18:18:02,197 writing dependency_links to src/vivarium_engine.egg-info/dependency_links.txt 2026-06-17T18:18:02,199 writing entry points to src/vivarium_engine.egg-info/entry_points.txt 2026-06-17T18:18:02,203 writing requirements to src/vivarium_engine.egg-info/requires.txt 2026-06-17T18:18:02,204 writing top-level names to src/vivarium_engine.egg-info/top_level.txt 2026-06-17T18:18:02,261 /tmp/pip-build-env-3lu3mue8/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-06-17T18:18:02,262 return get_active_overrides().subprocess_timeout 2026-06-17T18:18:02,269 listing git files failed - pretending there aren't any 2026-06-17T18:18:02,274 reading manifest file 'src/vivarium_engine.egg-info/SOURCES.txt' 2026-06-17T18:18:02,315 adding license file 'LICENSE' 2026-06-17T18:18:02,327 writing manifest file 'src/vivarium_engine.egg-info/SOURCES.txt' 2026-06-17T18:18:02,437 Getting requirements to build wheel: finished with status 'done' 2026-06-17T18:18:02,440 Created temporary directory: /tmp/pip-modern-metadata-mj_wd5bf 2026-06-17T18:18:02,443 Preparing metadata (pyproject.toml): started 2026-06-17T18:18:02,444 Running command Preparing metadata (pyproject.toml) 2026-06-17T18:18:03,121 /tmp/pip-build-env-3lu3mue8/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-06-17T18:18:03,122 !! 2026-06-17T18:18:03,124 ******************************************************************************** 2026-06-17T18:18:03,125 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-06-17T18:18:03,127 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-06-17T18:18:03,127 or your builds will no longer be supported. 2026-06-17T18:18:03,128 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-06-17T18:18:03,129 ******************************************************************************** 2026-06-17T18:18:03,130 !! 2026-06-17T18:18:03,130 corresp(dist, value, root_dir) 2026-06-17T18:18:03,195 /tmp/pip-build-env-3lu3mue8/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-06-17T18:18:03,195 !! 2026-06-17T18:18:03,196 ******************************************************************************** 2026-06-17T18:18:03,197 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-06-17T18:18:03,198 License :: OSI Approved :: BSD License 2026-06-17T18:18:03,199 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-06-17T18:18:03,200 ******************************************************************************** 2026-06-17T18:18:03,201 !! 2026-06-17T18:18:03,201 dist._finalize_license_expression() 2026-06-17T18:18:03,202 /tmp/pip-build-env-3lu3mue8/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-06-17T18:18:03,203 !! 2026-06-17T18:18:03,204 ******************************************************************************** 2026-06-17T18:18:03,205 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-06-17T18:18:03,206 License :: OSI Approved :: BSD License 2026-06-17T18:18:03,207 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-06-17T18:18:03,208 ******************************************************************************** 2026-06-17T18:18:03,209 !! 2026-06-17T18:18:03,209 self._finalize_license_expression() 2026-06-17T18:18:03,210 running dist_info 2026-06-17T18:18:03,223 creating /tmp/pip-modern-metadata-mj_wd5bf/vivarium_engine.egg-info 2026-06-17T18:18:03,224 writing /tmp/pip-modern-metadata-mj_wd5bf/vivarium_engine.egg-info/PKG-INFO 2026-06-17T18:18:03,230 writing dependency_links to /tmp/pip-modern-metadata-mj_wd5bf/vivarium_engine.egg-info/dependency_links.txt 2026-06-17T18:18:03,232 writing entry points to /tmp/pip-modern-metadata-mj_wd5bf/vivarium_engine.egg-info/entry_points.txt 2026-06-17T18:18:03,236 writing requirements to /tmp/pip-modern-metadata-mj_wd5bf/vivarium_engine.egg-info/requires.txt 2026-06-17T18:18:03,237 writing top-level names to /tmp/pip-modern-metadata-mj_wd5bf/vivarium_engine.egg-info/top_level.txt 2026-06-17T18:18:03,239 writing manifest file '/tmp/pip-modern-metadata-mj_wd5bf/vivarium_engine.egg-info/SOURCES.txt' 2026-06-17T18:18:03,289 /tmp/pip-build-env-3lu3mue8/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-06-17T18:18:03,290 return get_active_overrides().subprocess_timeout 2026-06-17T18:18:03,296 listing git files failed - pretending there aren't any 2026-06-17T18:18:03,301 reading manifest file '/tmp/pip-modern-metadata-mj_wd5bf/vivarium_engine.egg-info/SOURCES.txt' 2026-06-17T18:18:03,303 adding license file 'LICENSE' 2026-06-17T18:18:03,309 writing manifest file '/tmp/pip-modern-metadata-mj_wd5bf/vivarium_engine.egg-info/SOURCES.txt' 2026-06-17T18:18:03,310 creating '/tmp/pip-modern-metadata-mj_wd5bf/vivarium_engine-5.1.6.dist-info' 2026-06-17T18:18:03,445 Preparing metadata (pyproject.toml): finished with status 'done' 2026-06-17T18:18:03,450 Source in /tmp/pip-wheel-q6ddimgw/vivarium-engine_dcd0486f7618498784345e5b3dea2089 has version 5.1.6, which satisfies requirement vivarium-engine==5.1.6 from https://files.pythonhosted.org/packages/3f/96/1d78de3cc12cfad768a5614064d0154cfc437f813e097fd78417c55e0cfc/vivarium_engine-5.1.6.tar.gz 2026-06-17T18:18:03,451 Removed vivarium-engine==5.1.6 from https://files.pythonhosted.org/packages/3f/96/1d78de3cc12cfad768a5614064d0154cfc437f813e097fd78417c55e0cfc/vivarium_engine-5.1.6.tar.gz from build tracker '/tmp/pip-build-tracker-v266dx30' 2026-06-17T18:18:03,457 Created temporary directory: /tmp/pip-unpack-9qvs2v53 2026-06-17T18:18:03,458 Building wheels for collected packages: vivarium-engine 2026-06-17T18:18:03,463 Created temporary directory: /tmp/pip-wheel-_it574ii 2026-06-17T18:18:03,463 Destination directory: /tmp/pip-wheel-_it574ii 2026-06-17T18:18:03,466 Building wheel for vivarium-engine (pyproject.toml): started 2026-06-17T18:18:03,467 Running command Building wheel for vivarium-engine (pyproject.toml) 2026-06-17T18:18:04,143 /tmp/pip-build-env-3lu3mue8/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-06-17T18:18:04,144 !! 2026-06-17T18:18:04,145 ******************************************************************************** 2026-06-17T18:18:04,145 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-06-17T18:18:04,147 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-06-17T18:18:04,147 or your builds will no longer be supported. 2026-06-17T18:18:04,148 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-06-17T18:18:04,149 ******************************************************************************** 2026-06-17T18:18:04,150 !! 2026-06-17T18:18:04,151 corresp(dist, value, root_dir) 2026-06-17T18:18:04,209 /tmp/pip-build-env-3lu3mue8/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-06-17T18:18:04,210 !! 2026-06-17T18:18:04,211 ******************************************************************************** 2026-06-17T18:18:04,211 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-06-17T18:18:04,213 License :: OSI Approved :: BSD License 2026-06-17T18:18:04,214 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-06-17T18:18:04,214 ******************************************************************************** 2026-06-17T18:18:04,215 !! 2026-06-17T18:18:04,216 dist._finalize_license_expression() 2026-06-17T18:18:04,216 /tmp/pip-build-env-3lu3mue8/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-06-17T18:18:04,217 !! 2026-06-17T18:18:04,218 ******************************************************************************** 2026-06-17T18:18:04,218 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-06-17T18:18:04,219 License :: OSI Approved :: BSD License 2026-06-17T18:18:04,220 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-06-17T18:18:04,221 ******************************************************************************** 2026-06-17T18:18:04,222 !! 2026-06-17T18:18:04,222 self._finalize_license_expression() 2026-06-17T18:18:04,223 running bdist_wheel 2026-06-17T18:18:04,243 running build 2026-06-17T18:18:04,243 running build_py 2026-06-17T18:18:04,245 creating build/lib/vivarium 2026-06-17T18:18:04,247 copying src/vivarium/__init__.py -> build/lib/vivarium 2026-06-17T18:18:04,250 creating build/lib/vivarium/engine 2026-06-17T18:18:04,251 copying src/vivarium/engine/exceptions.py -> build/lib/vivarium/engine 2026-06-17T18:18:04,253 copying src/vivarium/engine/manager.py -> build/lib/vivarium/engine 2026-06-17T18:18:04,255 copying src/vivarium/engine/__init__.py -> build/lib/vivarium/engine 2026-06-17T18:18:04,257 copying src/vivarium/engine/testing_utilities.py -> build/lib/vivarium/engine 2026-06-17T18:18:04,260 copying src/vivarium/engine/types.py -> build/lib/vivarium/engine 2026-06-17T18:18:04,262 copying src/vivarium/engine/component.py -> build/lib/vivarium/engine 2026-06-17T18:18:04,267 creating build/lib/vivarium/engine/examples 2026-06-17T18:18:04,269 copying src/vivarium/engine/examples/__init__.py -> build/lib/vivarium/engine/examples 2026-06-17T18:18:04,272 creating build/lib/vivarium/engine/framework 2026-06-17T18:18:04,274 copying src/vivarium/engine/framework/configuration.py -> build/lib/vivarium/engine/framework 2026-06-17T18:18:04,276 copying src/vivarium/engine/framework/engine.py -> build/lib/vivarium/engine/framework 2026-06-17T18:18:04,279 copying src/vivarium/engine/framework/__init__.py -> build/lib/vivarium/engine/framework 2026-06-17T18:18:04,281 copying src/vivarium/engine/framework/state_machine.py -> build/lib/vivarium/engine/framework 2026-06-17T18:18:04,284 copying src/vivarium/engine/framework/plugins.py -> build/lib/vivarium/engine/framework 2026-06-17T18:18:04,288 copying src/vivarium/engine/framework/utilities.py -> build/lib/vivarium/engine/framework 2026-06-17T18:18:04,292 creating build/lib/vivarium/engine/interface 2026-06-17T18:18:04,293 copying src/vivarium/engine/interface/cli.py -> build/lib/vivarium/engine/interface 2026-06-17T18:18:04,295 copying src/vivarium/engine/interface/__init__.py -> build/lib/vivarium/engine/interface 2026-06-17T18:18:04,297 copying src/vivarium/engine/interface/cli_tools.py -> build/lib/vivarium/engine/interface 2026-06-17T18:18:04,299 copying src/vivarium/engine/interface/interactive.py -> build/lib/vivarium/engine/interface 2026-06-17T18:18:04,301 copying src/vivarium/engine/interface/utilities.py -> build/lib/vivarium/engine/interface 2026-06-17T18:18:04,305 creating build/lib/vivarium/engine/examples/boids 2026-06-17T18:18:04,306 copying src/vivarium/engine/examples/boids/movement.py -> build/lib/vivarium/engine/examples/boids 2026-06-17T18:18:04,309 copying src/vivarium/engine/examples/boids/forces.py -> build/lib/vivarium/engine/examples/boids 2026-06-17T18:18:04,312 copying src/vivarium/engine/examples/boids/__init__.py -> build/lib/vivarium/engine/examples/boids 2026-06-17T18:18:04,314 copying src/vivarium/engine/examples/boids/visualization.py -> build/lib/vivarium/engine/examples/boids 2026-06-17T18:18:04,316 copying src/vivarium/engine/examples/boids/population.py -> build/lib/vivarium/engine/examples/boids 2026-06-17T18:18:04,317 copying src/vivarium/engine/examples/boids/neighbors.py -> build/lib/vivarium/engine/examples/boids 2026-06-17T18:18:04,320 creating build/lib/vivarium/engine/examples/disease_model 2026-06-17T18:18:04,321 copying src/vivarium/engine/examples/disease_model/risk.py -> build/lib/vivarium/engine/examples/disease_model 2026-06-17T18:18:04,324 copying src/vivarium/engine/examples/disease_model/__init__.py -> build/lib/vivarium/engine/examples/disease_model 2026-06-17T18:18:04,325 copying src/vivarium/engine/examples/disease_model/observer.py -> build/lib/vivarium/engine/examples/disease_model 2026-06-17T18:18:04,327 copying src/vivarium/engine/examples/disease_model/population.py -> build/lib/vivarium/engine/examples/disease_model 2026-06-17T18:18:04,330 copying src/vivarium/engine/examples/disease_model/intervention.py -> build/lib/vivarium/engine/examples/disease_model 2026-06-17T18:18:04,331 copying src/vivarium/engine/examples/disease_model/disease.py -> build/lib/vivarium/engine/examples/disease_model 2026-06-17T18:18:04,334 copying src/vivarium/engine/examples/disease_model/mortality.py -> build/lib/vivarium/engine/examples/disease_model 2026-06-17T18:18:04,336 creating build/lib/vivarium/engine/framework/time 2026-06-17T18:18:04,337 copying src/vivarium/engine/framework/time/manager.py -> build/lib/vivarium/engine/framework/time 2026-06-17T18:18:04,339 copying src/vivarium/engine/framework/time/__init__.py -> build/lib/vivarium/engine/framework/time 2026-06-17T18:18:04,341 copying src/vivarium/engine/framework/time/interface.py -> build/lib/vivarium/engine/framework/time 2026-06-17T18:18:04,343 creating build/lib/vivarium/engine/framework/population 2026-06-17T18:18:04,344 copying src/vivarium/engine/framework/population/exceptions.py -> build/lib/vivarium/engine/framework/population 2026-06-17T18:18:04,346 copying src/vivarium/engine/framework/population/manager.py -> build/lib/vivarium/engine/framework/population 2026-06-17T18:18:04,349 copying src/vivarium/engine/framework/population/__init__.py -> build/lib/vivarium/engine/framework/population 2026-06-17T18:18:04,351 copying src/vivarium/engine/framework/population/interface.py -> build/lib/vivarium/engine/framework/population 2026-06-17T18:18:04,353 copying src/vivarium/engine/framework/population/population_view.py -> build/lib/vivarium/engine/framework/population 2026-06-17T18:18:04,356 copying src/vivarium/engine/framework/population/utilities.py -> build/lib/vivarium/engine/framework/population 2026-06-17T18:18:04,358 creating build/lib/vivarium/engine/framework/components 2026-06-17T18:18:04,359 copying src/vivarium/engine/framework/components/parser.py -> build/lib/vivarium/engine/framework/components 2026-06-17T18:18:04,361 copying src/vivarium/engine/framework/components/manager.py -> build/lib/vivarium/engine/framework/components 2026-06-17T18:18:04,363 copying src/vivarium/engine/framework/components/__init__.py -> build/lib/vivarium/engine/framework/components 2026-06-17T18:18:04,365 copying src/vivarium/engine/framework/components/interface.py -> build/lib/vivarium/engine/framework/components 2026-06-17T18:18:04,368 creating build/lib/vivarium/engine/framework/event 2026-06-17T18:18:04,369 copying src/vivarium/engine/framework/event/manager.py -> build/lib/vivarium/engine/framework/event 2026-06-17T18:18:04,371 copying src/vivarium/engine/framework/event/__init__.py -> build/lib/vivarium/engine/framework/event 2026-06-17T18:18:04,373 copying src/vivarium/engine/framework/event/interface.py -> build/lib/vivarium/engine/framework/event 2026-06-17T18:18:04,375 creating build/lib/vivarium/engine/framework/results 2026-06-17T18:18:04,376 copying src/vivarium/engine/framework/results/exceptions.py -> build/lib/vivarium/engine/framework/results 2026-06-17T18:18:04,378 copying src/vivarium/engine/framework/results/context.py -> build/lib/vivarium/engine/framework/results 2026-06-17T18:18:04,381 copying src/vivarium/engine/framework/results/manager.py -> build/lib/vivarium/engine/framework/results 2026-06-17T18:18:04,384 copying src/vivarium/engine/framework/results/__init__.py -> build/lib/vivarium/engine/framework/results 2026-06-17T18:18:04,386 copying src/vivarium/engine/framework/results/observation.py -> build/lib/vivarium/engine/framework/results 2026-06-17T18:18:04,389 copying src/vivarium/engine/framework/results/observer.py -> build/lib/vivarium/engine/framework/results 2026-06-17T18:18:04,391 copying src/vivarium/engine/framework/results/interface.py -> build/lib/vivarium/engine/framework/results 2026-06-17T18:18:04,393 copying src/vivarium/engine/framework/results/stratification.py -> build/lib/vivarium/engine/framework/results 2026-06-17T18:18:04,396 creating build/lib/vivarium/engine/framework/resource 2026-06-17T18:18:04,398 copying src/vivarium/engine/framework/resource/resource.py -> build/lib/vivarium/engine/framework/resource 2026-06-17T18:18:04,400 copying src/vivarium/engine/framework/resource/exceptions.py -> build/lib/vivarium/engine/framework/resource 2026-06-17T18:18:04,403 copying src/vivarium/engine/framework/resource/manager.py -> build/lib/vivarium/engine/framework/resource 2026-06-17T18:18:04,405 copying src/vivarium/engine/framework/resource/__init__.py -> build/lib/vivarium/engine/framework/resource 2026-06-17T18:18:04,407 copying src/vivarium/engine/framework/resource/interface.py -> build/lib/vivarium/engine/framework/resource 2026-06-17T18:18:04,410 creating build/lib/vivarium/engine/framework/lifecycle 2026-06-17T18:18:04,411 copying src/vivarium/engine/framework/lifecycle/constraint_maker.py -> build/lib/vivarium/engine/framework/lifecycle 2026-06-17T18:18:04,414 copying src/vivarium/engine/framework/lifecycle/exceptions.py -> build/lib/vivarium/engine/framework/lifecycle 2026-06-17T18:18:04,416 copying src/vivarium/engine/framework/lifecycle/manager.py -> build/lib/vivarium/engine/framework/lifecycle 2026-06-17T18:18:04,418 copying src/vivarium/engine/framework/lifecycle/__init__.py -> build/lib/vivarium/engine/framework/lifecycle 2026-06-17T18:18:04,421 copying src/vivarium/engine/framework/lifecycle/entities.py -> build/lib/vivarium/engine/framework/lifecycle 2026-06-17T18:18:04,423 copying src/vivarium/engine/framework/lifecycle/interface.py -> build/lib/vivarium/engine/framework/lifecycle 2026-06-17T18:18:04,425 copying src/vivarium/engine/framework/lifecycle/lifecycle_states.py -> build/lib/vivarium/engine/framework/lifecycle 2026-06-17T18:18:04,428 creating build/lib/vivarium/engine/framework/logging 2026-06-17T18:18:04,430 copying src/vivarium/engine/framework/logging/manager.py -> build/lib/vivarium/engine/framework/logging 2026-06-17T18:18:04,432 copying src/vivarium/engine/framework/logging/__init__.py -> build/lib/vivarium/engine/framework/logging 2026-06-17T18:18:04,434 copying src/vivarium/engine/framework/logging/interface.py -> build/lib/vivarium/engine/framework/logging 2026-06-17T18:18:04,436 copying src/vivarium/engine/framework/logging/utilities.py -> build/lib/vivarium/engine/framework/logging 2026-06-17T18:18:04,439 creating build/lib/vivarium/engine/framework/values 2026-06-17T18:18:04,441 copying src/vivarium/engine/framework/values/exceptions.py -> build/lib/vivarium/engine/framework/values 2026-06-17T18:18:04,443 copying src/vivarium/engine/framework/values/manager.py -> build/lib/vivarium/engine/framework/values 2026-06-17T18:18:04,446 copying src/vivarium/engine/framework/values/pipeline.py -> build/lib/vivarium/engine/framework/values 2026-06-17T18:18:04,449 copying src/vivarium/engine/framework/values/__init__.py -> build/lib/vivarium/engine/framework/values 2026-06-17T18:18:04,451 copying src/vivarium/engine/framework/values/combiners.py -> build/lib/vivarium/engine/framework/values 2026-06-17T18:18:04,453 copying src/vivarium/engine/framework/values/interface.py -> build/lib/vivarium/engine/framework/values 2026-06-17T18:18:04,456 copying src/vivarium/engine/framework/values/post_processors.py -> build/lib/vivarium/engine/framework/values 2026-06-17T18:18:04,459 creating build/lib/vivarium/engine/framework/randomness 2026-06-17T18:18:04,461 copying src/vivarium/engine/framework/randomness/exceptions.py -> build/lib/vivarium/engine/framework/randomness 2026-06-17T18:18:04,464 copying src/vivarium/engine/framework/randomness/manager.py -> build/lib/vivarium/engine/framework/randomness 2026-06-17T18:18:04,466 copying src/vivarium/engine/framework/randomness/__init__.py -> build/lib/vivarium/engine/framework/randomness 2026-06-17T18:18:04,468 copying src/vivarium/engine/framework/randomness/stream.py -> build/lib/vivarium/engine/framework/randomness 2026-06-17T18:18:04,471 copying src/vivarium/engine/framework/randomness/interface.py -> build/lib/vivarium/engine/framework/randomness 2026-06-17T18:18:04,473 copying src/vivarium/engine/framework/randomness/index_map.py -> build/lib/vivarium/engine/framework/randomness 2026-06-17T18:18:04,476 creating build/lib/vivarium/engine/framework/artifact 2026-06-17T18:18:04,478 copying src/vivarium/engine/framework/artifact/manager.py -> build/lib/vivarium/engine/framework/artifact 2026-06-17T18:18:04,480 copying src/vivarium/engine/framework/artifact/__init__.py -> build/lib/vivarium/engine/framework/artifact 2026-06-17T18:18:04,483 copying src/vivarium/engine/framework/artifact/interface.py -> build/lib/vivarium/engine/framework/artifact 2026-06-17T18:18:04,485 creating build/lib/vivarium/engine/framework/lookup 2026-06-17T18:18:04,487 copying src/vivarium/engine/framework/lookup/interpolation.py -> build/lib/vivarium/engine/framework/lookup 2026-06-17T18:18:04,490 copying src/vivarium/engine/framework/lookup/manager.py -> build/lib/vivarium/engine/framework/lookup 2026-06-17T18:18:04,492 copying src/vivarium/engine/framework/lookup/__init__.py -> build/lib/vivarium/engine/framework/lookup 2026-06-17T18:18:04,495 copying src/vivarium/engine/framework/lookup/table.py -> build/lib/vivarium/engine/framework/lookup 2026-06-17T18:18:04,498 copying src/vivarium/engine/framework/lookup/interface.py -> build/lib/vivarium/engine/framework/lookup 2026-06-17T18:18:04,500 running egg_info 2026-06-17T18:18:04,514 writing src/vivarium_engine.egg-info/PKG-INFO 2026-06-17T18:18:04,519 writing dependency_links to src/vivarium_engine.egg-info/dependency_links.txt 2026-06-17T18:18:04,521 writing entry points to src/vivarium_engine.egg-info/entry_points.txt 2026-06-17T18:18:04,524 writing requirements to src/vivarium_engine.egg-info/requires.txt 2026-06-17T18:18:04,525 writing top-level names to src/vivarium_engine.egg-info/top_level.txt 2026-06-17T18:18:04,568 /tmp/pip-build-env-3lu3mue8/overlay/local/lib/python3.11/dist-packages/vcs_versioning/overrides.py:609: UserWarning: No GlobalOverrides context is active. Auto-creating one with SETUPTOOLS_SCM prefix for backwards compatibility. Consider using 'with GlobalOverrides.from_env("YOUR_TOOL"):' explicitly. 2026-06-17T18:18:04,568 return get_active_overrides().subprocess_timeout 2026-06-17T18:18:04,575 listing git files failed - pretending there aren't any 2026-06-17T18:18:04,580 reading manifest file 'src/vivarium_engine.egg-info/SOURCES.txt' 2026-06-17T18:18:04,596 adding license file 'LICENSE' 2026-06-17T18:18:04,608 writing manifest file 'src/vivarium_engine.egg-info/SOURCES.txt' 2026-06-17T18:18:04,626 copying src/vivarium/engine/py.typed -> build/lib/vivarium/engine 2026-06-17T18:18:04,628 copying src/vivarium/engine/examples/disease_model/disease_model.yaml -> build/lib/vivarium/engine/examples/disease_model 2026-06-17T18:18:04,651 installing to build/bdist.linux-armv7l/wheel 2026-06-17T18:18:04,652 running install 2026-06-17T18:18:04,674 running install_lib 2026-06-17T18:18:04,682 creating build/bdist.linux-armv7l/wheel 2026-06-17T18:18:04,684 creating build/bdist.linux-armv7l/wheel/vivarium 2026-06-17T18:18:04,685 copying build/lib/vivarium/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium 2026-06-17T18:18:04,688 creating build/bdist.linux-armv7l/wheel/vivarium/engine 2026-06-17T18:18:04,690 creating build/bdist.linux-armv7l/wheel/vivarium/engine/examples 2026-06-17T18:18:04,691 copying build/lib/vivarium/engine/examples/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/examples 2026-06-17T18:18:04,693 creating build/bdist.linux-armv7l/wheel/vivarium/engine/examples/boids 2026-06-17T18:18:04,694 copying build/lib/vivarium/engine/examples/boids/movement.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/examples/boids 2026-06-17T18:18:04,696 copying build/lib/vivarium/engine/examples/boids/forces.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/examples/boids 2026-06-17T18:18:04,699 copying build/lib/vivarium/engine/examples/boids/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/examples/boids 2026-06-17T18:18:04,700 copying build/lib/vivarium/engine/examples/boids/visualization.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/examples/boids 2026-06-17T18:18:04,702 copying build/lib/vivarium/engine/examples/boids/population.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/examples/boids 2026-06-17T18:18:04,704 copying build/lib/vivarium/engine/examples/boids/neighbors.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/examples/boids 2026-06-17T18:18:04,707 creating build/bdist.linux-armv7l/wheel/vivarium/engine/examples/disease_model 2026-06-17T18:18:04,708 copying build/lib/vivarium/engine/examples/disease_model/risk.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/examples/disease_model 2026-06-17T18:18:04,710 copying build/lib/vivarium/engine/examples/disease_model/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/examples/disease_model 2026-06-17T18:18:04,712 copying build/lib/vivarium/engine/examples/disease_model/observer.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/examples/disease_model 2026-06-17T18:18:04,714 copying build/lib/vivarium/engine/examples/disease_model/population.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/examples/disease_model 2026-06-17T18:18:04,716 copying build/lib/vivarium/engine/examples/disease_model/intervention.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/examples/disease_model 2026-06-17T18:18:04,718 copying build/lib/vivarium/engine/examples/disease_model/disease.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/examples/disease_model 2026-06-17T18:18:04,721 copying build/lib/vivarium/engine/examples/disease_model/mortality.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/examples/disease_model 2026-06-17T18:18:04,723 copying build/lib/vivarium/engine/examples/disease_model/disease_model.yaml -> build/bdist.linux-armv7l/wheel/./vivarium/engine/examples/disease_model 2026-06-17T18:18:04,725 copying build/lib/vivarium/engine/exceptions.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine 2026-06-17T18:18:04,727 creating build/bdist.linux-armv7l/wheel/vivarium/engine/framework 2026-06-17T18:18:04,728 copying build/lib/vivarium/engine/framework/configuration.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework 2026-06-17T18:18:04,731 creating build/bdist.linux-armv7l/wheel/vivarium/engine/framework/time 2026-06-17T18:18:04,732 copying build/lib/vivarium/engine/framework/time/manager.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/time 2026-06-17T18:18:04,735 copying build/lib/vivarium/engine/framework/time/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/time 2026-06-17T18:18:04,736 copying build/lib/vivarium/engine/framework/time/interface.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/time 2026-06-17T18:18:04,739 creating build/bdist.linux-armv7l/wheel/vivarium/engine/framework/population 2026-06-17T18:18:04,740 copying build/lib/vivarium/engine/framework/population/exceptions.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/population 2026-06-17T18:18:04,742 copying build/lib/vivarium/engine/framework/population/manager.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/population 2026-06-17T18:18:04,745 copying build/lib/vivarium/engine/framework/population/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/population 2026-06-17T18:18:04,747 copying build/lib/vivarium/engine/framework/population/interface.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/population 2026-06-17T18:18:04,749 copying build/lib/vivarium/engine/framework/population/population_view.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/population 2026-06-17T18:18:04,752 copying build/lib/vivarium/engine/framework/population/utilities.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/population 2026-06-17T18:18:04,754 copying build/lib/vivarium/engine/framework/engine.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework 2026-06-17T18:18:04,757 creating build/bdist.linux-armv7l/wheel/vivarium/engine/framework/components 2026-06-17T18:18:04,758 copying build/lib/vivarium/engine/framework/components/parser.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/components 2026-06-17T18:18:04,761 copying build/lib/vivarium/engine/framework/components/manager.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/components 2026-06-17T18:18:04,763 copying build/lib/vivarium/engine/framework/components/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/components 2026-06-17T18:18:04,765 copying build/lib/vivarium/engine/framework/components/interface.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/components 2026-06-17T18:18:04,768 creating build/bdist.linux-armv7l/wheel/vivarium/engine/framework/event 2026-06-17T18:18:04,769 copying build/lib/vivarium/engine/framework/event/manager.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/event 2026-06-17T18:18:04,771 copying build/lib/vivarium/engine/framework/event/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/event 2026-06-17T18:18:04,773 copying build/lib/vivarium/engine/framework/event/interface.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/event 2026-06-17T18:18:04,775 copying build/lib/vivarium/engine/framework/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework 2026-06-17T18:18:04,777 copying build/lib/vivarium/engine/framework/state_machine.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework 2026-06-17T18:18:04,781 creating build/bdist.linux-armv7l/wheel/vivarium/engine/framework/results 2026-06-17T18:18:04,782 copying build/lib/vivarium/engine/framework/results/exceptions.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/results 2026-06-17T18:18:04,784 copying build/lib/vivarium/engine/framework/results/context.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/results 2026-06-17T18:18:04,786 copying build/lib/vivarium/engine/framework/results/manager.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/results 2026-06-17T18:18:04,789 copying build/lib/vivarium/engine/framework/results/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/results 2026-06-17T18:18:04,791 copying build/lib/vivarium/engine/framework/results/observation.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/results 2026-06-17T18:18:04,794 copying build/lib/vivarium/engine/framework/results/observer.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/results 2026-06-17T18:18:04,796 copying build/lib/vivarium/engine/framework/results/interface.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/results 2026-06-17T18:18:04,798 copying build/lib/vivarium/engine/framework/results/stratification.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/results 2026-06-17T18:18:04,801 creating build/bdist.linux-armv7l/wheel/vivarium/engine/framework/resource 2026-06-17T18:18:04,802 copying build/lib/vivarium/engine/framework/resource/resource.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/resource 2026-06-17T18:18:04,804 copying build/lib/vivarium/engine/framework/resource/exceptions.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/resource 2026-06-17T18:18:04,806 copying build/lib/vivarium/engine/framework/resource/manager.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/resource 2026-06-17T18:18:04,808 copying build/lib/vivarium/engine/framework/resource/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/resource 2026-06-17T18:18:04,810 copying build/lib/vivarium/engine/framework/resource/interface.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/resource 2026-06-17T18:18:04,813 creating build/bdist.linux-armv7l/wheel/vivarium/engine/framework/lifecycle 2026-06-17T18:18:04,814 copying build/lib/vivarium/engine/framework/lifecycle/constraint_maker.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/lifecycle 2026-06-17T18:18:04,817 copying build/lib/vivarium/engine/framework/lifecycle/exceptions.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/lifecycle 2026-06-17T18:18:04,819 copying build/lib/vivarium/engine/framework/lifecycle/manager.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/lifecycle 2026-06-17T18:18:04,821 copying build/lib/vivarium/engine/framework/lifecycle/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/lifecycle 2026-06-17T18:18:04,823 copying build/lib/vivarium/engine/framework/lifecycle/entities.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/lifecycle 2026-06-17T18:18:04,826 copying build/lib/vivarium/engine/framework/lifecycle/interface.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/lifecycle 2026-06-17T18:18:04,828 copying build/lib/vivarium/engine/framework/lifecycle/lifecycle_states.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/lifecycle 2026-06-17T18:18:04,830 creating build/bdist.linux-armv7l/wheel/vivarium/engine/framework/logging 2026-06-17T18:18:04,831 copying build/lib/vivarium/engine/framework/logging/manager.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/logging 2026-06-17T18:18:04,833 copying build/lib/vivarium/engine/framework/logging/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/logging 2026-06-17T18:18:04,835 copying build/lib/vivarium/engine/framework/logging/interface.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/logging 2026-06-17T18:18:04,837 copying build/lib/vivarium/engine/framework/logging/utilities.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/logging 2026-06-17T18:18:04,840 creating build/bdist.linux-armv7l/wheel/vivarium/engine/framework/values 2026-06-17T18:18:04,841 copying build/lib/vivarium/engine/framework/values/exceptions.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/values 2026-06-17T18:18:04,843 copying build/lib/vivarium/engine/framework/values/manager.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/values 2026-06-17T18:18:04,846 copying build/lib/vivarium/engine/framework/values/pipeline.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/values 2026-06-17T18:18:04,848 copying build/lib/vivarium/engine/framework/values/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/values 2026-06-17T18:18:04,850 copying build/lib/vivarium/engine/framework/values/combiners.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/values 2026-06-17T18:18:04,852 copying build/lib/vivarium/engine/framework/values/interface.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/values 2026-06-17T18:18:04,855 copying build/lib/vivarium/engine/framework/values/post_processors.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/values 2026-06-17T18:18:04,858 creating build/bdist.linux-armv7l/wheel/vivarium/engine/framework/randomness 2026-06-17T18:18:04,859 copying build/lib/vivarium/engine/framework/randomness/exceptions.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/randomness 2026-06-17T18:18:04,861 copying build/lib/vivarium/engine/framework/randomness/manager.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/randomness 2026-06-17T18:18:04,864 copying build/lib/vivarium/engine/framework/randomness/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/randomness 2026-06-17T18:18:04,865 copying build/lib/vivarium/engine/framework/randomness/stream.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/randomness 2026-06-17T18:18:04,868 copying build/lib/vivarium/engine/framework/randomness/interface.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/randomness 2026-06-17T18:18:04,870 copying build/lib/vivarium/engine/framework/randomness/index_map.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/randomness 2026-06-17T18:18:04,873 creating build/bdist.linux-armv7l/wheel/vivarium/engine/framework/artifact 2026-06-17T18:18:04,874 copying build/lib/vivarium/engine/framework/artifact/manager.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/artifact 2026-06-17T18:18:04,876 copying build/lib/vivarium/engine/framework/artifact/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/artifact 2026-06-17T18:18:04,878 copying build/lib/vivarium/engine/framework/artifact/interface.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/artifact 2026-06-17T18:18:04,880 creating build/bdist.linux-armv7l/wheel/vivarium/engine/framework/lookup 2026-06-17T18:18:04,881 copying build/lib/vivarium/engine/framework/lookup/interpolation.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/lookup 2026-06-17T18:18:04,884 copying build/lib/vivarium/engine/framework/lookup/manager.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/lookup 2026-06-17T18:18:04,886 copying build/lib/vivarium/engine/framework/lookup/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/lookup 2026-06-17T18:18:04,888 copying build/lib/vivarium/engine/framework/lookup/table.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/lookup 2026-06-17T18:18:04,890 copying build/lib/vivarium/engine/framework/lookup/interface.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework/lookup 2026-06-17T18:18:04,892 copying build/lib/vivarium/engine/framework/plugins.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework 2026-06-17T18:18:04,894 copying build/lib/vivarium/engine/framework/utilities.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/framework 2026-06-17T18:18:04,896 copying build/lib/vivarium/engine/manager.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine 2026-06-17T18:18:04,898 copying build/lib/vivarium/engine/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine 2026-06-17T18:18:04,900 copying build/lib/vivarium/engine/py.typed -> build/bdist.linux-armv7l/wheel/./vivarium/engine 2026-06-17T18:18:04,902 copying build/lib/vivarium/engine/testing_utilities.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine 2026-06-17T18:18:04,905 copying build/lib/vivarium/engine/types.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine 2026-06-17T18:18:04,907 creating build/bdist.linux-armv7l/wheel/vivarium/engine/interface 2026-06-17T18:18:04,908 copying build/lib/vivarium/engine/interface/cli.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/interface 2026-06-17T18:18:04,910 copying build/lib/vivarium/engine/interface/__init__.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/interface 2026-06-17T18:18:04,912 copying build/lib/vivarium/engine/interface/cli_tools.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/interface 2026-06-17T18:18:04,914 copying build/lib/vivarium/engine/interface/interactive.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/interface 2026-06-17T18:18:04,917 copying build/lib/vivarium/engine/interface/utilities.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine/interface 2026-06-17T18:18:04,919 copying build/lib/vivarium/engine/component.py -> build/bdist.linux-armv7l/wheel/./vivarium/engine 2026-06-17T18:18:04,921 running install_egg_info 2026-06-17T18:18:04,928 Copying src/vivarium_engine.egg-info to build/bdist.linux-armv7l/wheel/./vivarium_engine-5.1.6-py3.11.egg-info 2026-06-17T18:18:04,941 running install_scripts 2026-06-17T18:18:04,952 creating build/bdist.linux-armv7l/wheel/vivarium_engine-5.1.6.dist-info/WHEEL 2026-06-17T18:18:04,955 creating '/tmp/pip-wheel-_it574ii/.tmp-f_atpcox/vivarium_engine-5.1.6-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-06-17T18:18:04,958 adding 'vivarium/__init__.py' 2026-06-17T18:18:04,960 adding 'vivarium/engine/__init__.py' 2026-06-17T18:18:04,963 adding 'vivarium/engine/component.py' 2026-06-17T18:18:04,964 adding 'vivarium/engine/exceptions.py' 2026-06-17T18:18:04,966 adding 'vivarium/engine/manager.py' 2026-06-17T18:18:04,967 adding 'vivarium/engine/py.typed' 2026-06-17T18:18:04,969 adding 'vivarium/engine/testing_utilities.py' 2026-06-17T18:18:04,970 adding 'vivarium/engine/types.py' 2026-06-17T18:18:04,972 adding 'vivarium/engine/examples/__init__.py' 2026-06-17T18:18:04,974 adding 'vivarium/engine/examples/boids/__init__.py' 2026-06-17T18:18:04,975 adding 'vivarium/engine/examples/boids/forces.py' 2026-06-17T18:18:04,976 adding 'vivarium/engine/examples/boids/movement.py' 2026-06-17T18:18:04,978 adding 'vivarium/engine/examples/boids/neighbors.py' 2026-06-17T18:18:04,979 adding 'vivarium/engine/examples/boids/population.py' 2026-06-17T18:18:04,980 adding 'vivarium/engine/examples/boids/visualization.py' 2026-06-17T18:18:04,982 adding 'vivarium/engine/examples/disease_model/__init__.py' 2026-06-17T18:18:04,984 adding 'vivarium/engine/examples/disease_model/disease.py' 2026-06-17T18:18:04,985 adding 'vivarium/engine/examples/disease_model/disease_model.yaml' 2026-06-17T18:18:04,986 adding 'vivarium/engine/examples/disease_model/intervention.py' 2026-06-17T18:18:04,988 adding 'vivarium/engine/examples/disease_model/mortality.py' 2026-06-17T18:18:04,989 adding 'vivarium/engine/examples/disease_model/observer.py' 2026-06-17T18:18:04,991 adding 'vivarium/engine/examples/disease_model/population.py' 2026-06-17T18:18:04,992 adding 'vivarium/engine/examples/disease_model/risk.py' 2026-06-17T18:18:04,994 adding 'vivarium/engine/framework/__init__.py' 2026-06-17T18:18:04,995 adding 'vivarium/engine/framework/configuration.py' 2026-06-17T18:18:04,998 adding 'vivarium/engine/framework/engine.py' 2026-06-17T18:18:05,000 adding 'vivarium/engine/framework/plugins.py' 2026-06-17T18:18:05,003 adding 'vivarium/engine/framework/state_machine.py' 2026-06-17T18:18:05,004 adding 'vivarium/engine/framework/utilities.py' 2026-06-17T18:18:05,006 adding 'vivarium/engine/framework/artifact/__init__.py' 2026-06-17T18:18:05,007 adding 'vivarium/engine/framework/artifact/interface.py' 2026-06-17T18:18:05,009 adding 'vivarium/engine/framework/artifact/manager.py' 2026-06-17T18:18:05,011 adding 'vivarium/engine/framework/components/__init__.py' 2026-06-17T18:18:05,012 adding 'vivarium/engine/framework/components/interface.py' 2026-06-17T18:18:05,014 adding 'vivarium/engine/framework/components/manager.py' 2026-06-17T18:18:05,016 adding 'vivarium/engine/framework/components/parser.py' 2026-06-17T18:18:05,018 adding 'vivarium/engine/framework/event/__init__.py' 2026-06-17T18:18:05,019 adding 'vivarium/engine/framework/event/interface.py' 2026-06-17T18:18:05,021 adding 'vivarium/engine/framework/event/manager.py' 2026-06-17T18:18:05,023 adding 'vivarium/engine/framework/lifecycle/__init__.py' 2026-06-17T18:18:05,025 adding 'vivarium/engine/framework/lifecycle/constraint_maker.py' 2026-06-17T18:18:05,026 adding 'vivarium/engine/framework/lifecycle/entities.py' 2026-06-17T18:18:05,028 adding 'vivarium/engine/framework/lifecycle/exceptions.py' 2026-06-17T18:18:05,029 adding 'vivarium/engine/framework/lifecycle/interface.py' 2026-06-17T18:18:05,030 adding 'vivarium/engine/framework/lifecycle/lifecycle_states.py' 2026-06-17T18:18:05,032 adding 'vivarium/engine/framework/lifecycle/manager.py' 2026-06-17T18:18:05,033 adding 'vivarium/engine/framework/logging/__init__.py' 2026-06-17T18:18:05,035 adding 'vivarium/engine/framework/logging/interface.py' 2026-06-17T18:18:05,036 adding 'vivarium/engine/framework/logging/manager.py' 2026-06-17T18:18:05,037 adding 'vivarium/engine/framework/logging/utilities.py' 2026-06-17T18:18:05,039 adding 'vivarium/engine/framework/lookup/__init__.py' 2026-06-17T18:18:05,040 adding 'vivarium/engine/framework/lookup/interface.py' 2026-06-17T18:18:05,043 adding 'vivarium/engine/framework/lookup/interpolation.py' 2026-06-17T18:18:05,044 adding 'vivarium/engine/framework/lookup/manager.py' 2026-06-17T18:18:05,046 adding 'vivarium/engine/framework/lookup/table.py' 2026-06-17T18:18:05,048 adding 'vivarium/engine/framework/population/__init__.py' 2026-06-17T18:18:05,049 adding 'vivarium/engine/framework/population/exceptions.py' 2026-06-17T18:18:05,051 adding 'vivarium/engine/framework/population/interface.py' 2026-06-17T18:18:05,054 adding 'vivarium/engine/framework/population/manager.py' 2026-06-17T18:18:05,058 adding 'vivarium/engine/framework/population/population_view.py' 2026-06-17T18:18:05,059 adding 'vivarium/engine/framework/population/utilities.py' 2026-06-17T18:18:05,061 adding 'vivarium/engine/framework/randomness/__init__.py' 2026-06-17T18:18:05,062 adding 'vivarium/engine/framework/randomness/exceptions.py' 2026-06-17T18:18:05,064 adding 'vivarium/engine/framework/randomness/index_map.py' 2026-06-17T18:18:05,066 adding 'vivarium/engine/framework/randomness/interface.py' 2026-06-17T18:18:05,067 adding 'vivarium/engine/framework/randomness/manager.py' 2026-06-17T18:18:05,070 adding 'vivarium/engine/framework/randomness/stream.py' 2026-06-17T18:18:05,072 adding 'vivarium/engine/framework/resource/__init__.py' 2026-06-17T18:18:05,073 adding 'vivarium/engine/framework/resource/exceptions.py' 2026-06-17T18:18:05,074 adding 'vivarium/engine/framework/resource/interface.py' 2026-06-17T18:18:05,076 adding 'vivarium/engine/framework/resource/manager.py' 2026-06-17T18:18:05,078 adding 'vivarium/engine/framework/resource/resource.py' 2026-06-17T18:18:05,079 adding 'vivarium/engine/framework/results/__init__.py' 2026-06-17T18:18:05,082 adding 'vivarium/engine/framework/results/context.py' 2026-06-17T18:18:05,083 adding 'vivarium/engine/framework/results/exceptions.py' 2026-06-17T18:18:05,085 adding 'vivarium/engine/framework/results/interface.py' 2026-06-17T18:18:05,088 adding 'vivarium/engine/framework/results/manager.py' 2026-06-17T18:18:05,090 adding 'vivarium/engine/framework/results/observation.py' 2026-06-17T18:18:05,092 adding 'vivarium/engine/framework/results/observer.py' 2026-06-17T18:18:05,093 adding 'vivarium/engine/framework/results/stratification.py' 2026-06-17T18:18:05,095 adding 'vivarium/engine/framework/time/__init__.py' 2026-06-17T18:18:05,096 adding 'vivarium/engine/framework/time/interface.py' 2026-06-17T18:18:05,098 adding 'vivarium/engine/framework/time/manager.py' 2026-06-17T18:18:05,100 adding 'vivarium/engine/framework/values/__init__.py' 2026-06-17T18:18:05,101 adding 'vivarium/engine/framework/values/combiners.py' 2026-06-17T18:18:05,103 adding 'vivarium/engine/framework/values/exceptions.py' 2026-06-17T18:18:05,105 adding 'vivarium/engine/framework/values/interface.py' 2026-06-17T18:18:05,107 adding 'vivarium/engine/framework/values/manager.py' 2026-06-17T18:18:05,109 adding 'vivarium/engine/framework/values/pipeline.py' 2026-06-17T18:18:05,111 adding 'vivarium/engine/framework/values/post_processors.py' 2026-06-17T18:18:05,113 adding 'vivarium/engine/interface/__init__.py' 2026-06-17T18:18:05,114 adding 'vivarium/engine/interface/cli.py' 2026-06-17T18:18:05,116 adding 'vivarium/engine/interface/cli_tools.py' 2026-06-17T18:18:05,117 adding 'vivarium/engine/interface/interactive.py' 2026-06-17T18:18:05,119 adding 'vivarium/engine/interface/utilities.py' 2026-06-17T18:18:05,122 adding 'vivarium_engine-5.1.6.dist-info/licenses/LICENSE' 2026-06-17T18:18:05,123 adding 'vivarium_engine-5.1.6.dist-info/METADATA' 2026-06-17T18:18:05,124 adding 'vivarium_engine-5.1.6.dist-info/WHEEL' 2026-06-17T18:18:05,125 adding 'vivarium_engine-5.1.6.dist-info/entry_points.txt' 2026-06-17T18:18:05,126 adding 'vivarium_engine-5.1.6.dist-info/top_level.txt' 2026-06-17T18:18:05,128 adding 'vivarium_engine-5.1.6.dist-info/RECORD' 2026-06-17T18:18:05,132 removing build/bdist.linux-armv7l/wheel 2026-06-17T18:18:05,265 Building wheel for vivarium-engine (pyproject.toml): finished with status 'done' 2026-06-17T18:18:05,273 Created wheel for vivarium-engine: filename=vivarium_engine-5.1.6-py3-none-any.whl size=177375 sha256=22c43d087a0f95ac680c30e191e5b497bb8df2867cc8a8ae4fa1c4bb09238dc1 2026-06-17T18:18:05,274 Stored in directory: /tmp/pip-ephem-wheel-cache-4s6qh9ka/wheels/20/24/42/d7b3354ef1333fa78c7263e2e8677090fb97ac3e526af47ece 2026-06-17T18:18:05,287 Successfully built vivarium-engine 2026-06-17T18:18:05,295 Removed build tracker: '/tmp/pip-build-tracker-v266dx30'