2026-06-18T03:32:13,878 Created temporary directory: /tmp/pip-ephem-wheel-cache-fwz_8p_c 2026-06-18T03:32:13,880 Created temporary directory: /tmp/pip-build-tracker-egxw1724 2026-06-18T03:32:13,880 Initialized build tracking at /tmp/pip-build-tracker-egxw1724 2026-06-18T03:32:13,881 Created build tracker: /tmp/pip-build-tracker-egxw1724 2026-06-18T03:32:13,881 Entered build tracker: /tmp/pip-build-tracker-egxw1724 2026-06-18T03:32:13,882 Created temporary directory: /tmp/pip-wheel-wsf0kmqe 2026-06-18T03:32:13,885 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-06-18T03:32:13,887 Created temporary directory: /tmp/pip-ephem-wheel-cache-a5grh6qg 2026-06-18T03:32:13,908 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-06-18T03:32:13,912 2 location(s) to search for versions of nifstd-tools: 2026-06-18T03:32:13,912 * https://pypi.org/simple/nifstd-tools/ 2026-06-18T03:32:13,912 * https://www.piwheels.org/simple/nifstd-tools/ 2026-06-18T03:32:13,913 Fetching project page and analyzing links: https://pypi.org/simple/nifstd-tools/ 2026-06-18T03:32:13,914 Getting page https://pypi.org/simple/nifstd-tools/ 2026-06-18T03:32:13,915 Found index url https://pypi.org/simple 2026-06-18T03:32:14,241 Fetched page https://pypi.org/simple/nifstd-tools/ as application/vnd.pypi.simple.v1+json 2026-06-18T03:32:14,245 Found link https://files.pythonhosted.org/packages/94/87/4b2523af34e758ce739068375e98cdedb16976ab98b3a1943fb8d9398984/nifstd-tools-0.0.1.tar.gz (from https://pypi.org/simple/nifstd-tools/) (requires-python:>=3.6), version: 0.0.1 2026-06-18T03:32:14,246 Found link https://files.pythonhosted.org/packages/93/37/4e3fa9fa870edef6338fb987320b0cd8e73816bdd32aa84dbbefabb37eac/nifstd-tools-0.0.2.tar.gz (from https://pypi.org/simple/nifstd-tools/) (requires-python:>=3.6), version: 0.0.2 2026-06-18T03:32:14,247 Skipping link: No binaries permitted for nifstd-tools: https://files.pythonhosted.org/packages/dc/a3/3bbb7dff4cb86f5189078ecc09789e6ae2aedf313271e0baafbe3c99d34c/nifstd_tools-0.0.2-py2.py3-none-any.whl (from https://pypi.org/simple/nifstd-tools/) (requires-python:>=3.6) 2026-06-18T03:32:14,248 Found link https://files.pythonhosted.org/packages/63/f4/a8710a73af46fc9d31ed1f017228ee441a5f299f0c12b0ea867f9198e95d/nifstd-tools-0.0.3.tar.gz (from https://pypi.org/simple/nifstd-tools/) (requires-python:>=3.6), version: 0.0.3 2026-06-18T03:32:14,249 Skipping link: No binaries permitted for nifstd-tools: https://files.pythonhosted.org/packages/87/ee/f948a76f0b3f4c51c6e54b542a2685dc33deafebbed286f6a310ebb788c5/nifstd_tools-0.0.3-py2.py3-none-any.whl (from https://pypi.org/simple/nifstd-tools/) (requires-python:>=3.6) 2026-06-18T03:32:14,250 Found link https://files.pythonhosted.org/packages/47/09/8398a0ad2361bed833b3d274878fabdc1863f56ccb72733bef13a95b1e3c/nifstd-tools-0.0.4.tar.gz (from https://pypi.org/simple/nifstd-tools/) (requires-python:>=3.6), version: 0.0.4 2026-06-18T03:32:14,251 Skipping link: No binaries permitted for nifstd-tools: https://files.pythonhosted.org/packages/79/ef/ff4d798ad9bf1f76535ffc595c30952a77c729adca30b79896a64b1ffc4c/nifstd_tools-0.0.4-py2.py3-none-any.whl (from https://pypi.org/simple/nifstd-tools/) (requires-python:>=3.6) 2026-06-18T03:32:14,252 Found link https://files.pythonhosted.org/packages/5d/6a/4b8fec4167b81469ca920c205e783c24076095c51d7531543e8c3d1c7eef/nifstd-tools-0.0.5.tar.gz (from https://pypi.org/simple/nifstd-tools/) (requires-python:>=3.6), version: 0.0.5 2026-06-18T03:32:14,252 Skipping link: No binaries permitted for nifstd-tools: https://files.pythonhosted.org/packages/6d/b5/7ff37d2d0c84edc83cbebc910f99ed018ef3546f5e51dd0f9ba46d9079c8/nifstd_tools-0.0.5-py2.py3-none-any.whl (from https://pypi.org/simple/nifstd-tools/) (requires-python:>=3.6) 2026-06-18T03:32:14,253 Found link https://files.pythonhosted.org/packages/92/68/194c40dc8c3864054494c953358a84edab8201cc4cc439d8c9e4b4ea46ae/nifstd-tools-0.0.6.tar.gz (from https://pypi.org/simple/nifstd-tools/) (requires-python:>=3.6), version: 0.0.6 2026-06-18T03:32:14,254 Skipping link: No binaries permitted for nifstd-tools: https://files.pythonhosted.org/packages/dd/58/8e64fae06a92f2da3807a8398b5d5d562d0da195d267bbcfc41aa66152c0/nifstd_tools-0.0.6-py2.py3-none-any.whl (from https://pypi.org/simple/nifstd-tools/) (requires-python:>=3.6) 2026-06-18T03:32:14,255 Found link https://files.pythonhosted.org/packages/fd/25/c04df0b2ca8abe614d66ec800a6d0e197b3a8f99a0af3620f34414c60a06/nifstd-tools-0.0.7.tar.gz (from https://pypi.org/simple/nifstd-tools/) (requires-python:>=3.6), version: 0.0.7 2026-06-18T03:32:14,256 Skipping link: No binaries permitted for nifstd-tools: https://files.pythonhosted.org/packages/48/aa/0962e66100f6ddeb6ad69311b2a0642d0012f60663304a3e8499df471e3f/nifstd_tools-0.0.7-py2.py3-none-any.whl (from https://pypi.org/simple/nifstd-tools/) (requires-python:>=3.6) 2026-06-18T03:32:14,256 Skipping link: No binaries permitted for nifstd-tools: https://files.pythonhosted.org/packages/cc/b7/3d07bd907b0e9b7cb86217af19909512c1e60a5bd2640e71a1f1322e3859/nifstd_tools-0.0.8-py2.py3-none-any.whl (from https://pypi.org/simple/nifstd-tools/) (requires-python:>=3.7) 2026-06-18T03:32:14,257 Found link https://files.pythonhosted.org/packages/0d/9b/64ef091cf326802931693602bfe2e30e2731ad36bab0979f11996e932579/nifstd_tools-0.0.8.tar.gz (from https://pypi.org/simple/nifstd-tools/) (requires-python:>=3.7), version: 0.0.8 2026-06-18T03:32:14,258 Fetching project page and analyzing links: https://www.piwheels.org/simple/nifstd-tools/ 2026-06-18T03:32:14,259 Getting page https://www.piwheels.org/simple/nifstd-tools/ 2026-06-18T03:32:14,260 Found index url https://www.piwheels.org/simple 2026-06-18T03:32:14,558 Fetched page https://www.piwheels.org/simple/nifstd-tools/ as text/html 2026-06-18T03:32:14,563 Skipping link: No binaries permitted for nifstd-tools: https://archive1.piwheels.org/simple/nifstd-tools/nifstd_tools-0.0.7-py2.py3-none-any.whl#sha256=17e594cf53a2fb1753f7054967edf27c01e135831a8f15a96f314495a6e74624 (from https://www.piwheels.org/simple/nifstd-tools/) (requires-python:>=3.6) 2026-06-18T03:32:14,564 Skipping link: No binaries permitted for nifstd-tools: https://archive1.piwheels.org/simple/nifstd-tools/nifstd_tools-0.0.6-py2.py3-none-any.whl#sha256=5664470664ab9a9b53f0f81cdfc999633c4efd1f93d9394034be5d9680b863dc (from https://www.piwheels.org/simple/nifstd-tools/) (requires-python:>=3.6) 2026-06-18T03:32:14,565 Skipping link: No binaries permitted for nifstd-tools: https://archive1.piwheels.org/simple/nifstd-tools/nifstd_tools-0.0.5-py2.py3-none-any.whl#sha256=3a52a8ea068961800357c38bdbe294cab5b731968e3f6c677faa78078db68d59 (from https://www.piwheels.org/simple/nifstd-tools/) (requires-python:>=3.6) 2026-06-18T03:32:14,566 Skipping link: No binaries permitted for nifstd-tools: https://archive1.piwheels.org/simple/nifstd-tools/nifstd_tools-0.0.4-py2.py3-none-any.whl#sha256=20cf3da3d1b3a2108a44f16cf6d71794b8f9f8f7f2f6dea3daec5b4ba4489bbf (from https://www.piwheels.org/simple/nifstd-tools/) (requires-python:>=3.6) 2026-06-18T03:32:14,566 Skipping link: No binaries permitted for nifstd-tools: https://archive1.piwheels.org/simple/nifstd-tools/nifstd_tools-0.0.3-py2.py3-none-any.whl#sha256=eae3ea80c0e3a6e8c50b0d89cb9581ad4acee0f2f3b6b0aeedf0a18ffb266dda (from https://www.piwheels.org/simple/nifstd-tools/) (requires-python:>=3.6) 2026-06-18T03:32:14,567 Skipping link: No binaries permitted for nifstd-tools: https://archive1.piwheels.org/simple/nifstd-tools/nifstd_tools-0.0.2-py2.py3-none-any.whl#sha256=8629e9779b7a1dd6cc488c8ab97b7ae79b00f4fd3979462907bbb98dca1cb7cd (from https://www.piwheels.org/simple/nifstd-tools/) (requires-python:>=3.6) 2026-06-18T03:32:14,568 Skipping link: No binaries permitted for nifstd-tools: https://archive1.piwheels.org/simple/nifstd-tools/nifstd_tools-0.0.1-py2.py3-none-any.whl#sha256=2b60cf8f62a87c2381e183c5716889a3cd229b6aeb59c8c2a2b37cdb336b62a8 (from https://www.piwheels.org/simple/nifstd-tools/) (requires-python:>=3.6) 2026-06-18T03:32:14,568 Skipping link: not a file: https://www.piwheels.org/simple/nifstd-tools/ 2026-06-18T03:32:14,569 Skipping link: not a file: https://pypi.org/simple/nifstd-tools/ 2026-06-18T03:32:14,591 Given no hashes to check 1 links for project 'nifstd-tools': discarding no candidates 2026-06-18T03:32:14,608 Collecting nifstd-tools==0.0.8 2026-06-18T03:32:14,611 Created temporary directory: /tmp/pip-unpack-pocg4loo 2026-06-18T03:32:14,934 Downloading nifstd_tools-0.0.8.tar.gz (162 kB) 2026-06-18T03:32:15,223 Added nifstd-tools==0.0.8 from https://files.pythonhosted.org/packages/0d/9b/64ef091cf326802931693602bfe2e30e2731ad36bab0979f11996e932579/nifstd_tools-0.0.8.tar.gz to build tracker '/tmp/pip-build-tracker-egxw1724' 2026-06-18T03:32:15,225 Running setup.py (path:/tmp/pip-wheel-wsf0kmqe/nifstd-tools_3dbffa156683450890783e72b9b10c90/setup.py) egg_info for package nifstd-tools 2026-06-18T03:32:15,226 Created temporary directory: /tmp/pip-pip-egg-info-s855ds5p 2026-06-18T03:32:15,226 Preparing metadata (setup.py): started 2026-06-18T03:32:15,227 Running command python setup.py egg_info 2026-06-18T03:32:15,800 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:287: UserWarning: Unknown distribution option: 'tests_require' 2026-06-18T03:32:15,800 warnings.warn(msg) 2026-06-18T03:32:16,146 running egg_info 2026-06-18T03:32:16,174 creating /tmp/pip-pip-egg-info-s855ds5p/nifstd_tools.egg-info 2026-06-18T03:32:16,175 writing /tmp/pip-pip-egg-info-s855ds5p/nifstd_tools.egg-info/PKG-INFO 2026-06-18T03:32:16,180 writing dependency_links to /tmp/pip-pip-egg-info-s855ds5p/nifstd_tools.egg-info/dependency_links.txt 2026-06-18T03:32:16,182 writing entry points to /tmp/pip-pip-egg-info-s855ds5p/nifstd_tools.egg-info/entry_points.txt 2026-06-18T03:32:16,184 writing requirements to /tmp/pip-pip-egg-info-s855ds5p/nifstd_tools.egg-info/requires.txt 2026-06-18T03:32:16,185 writing top-level names to /tmp/pip-pip-egg-info-s855ds5p/nifstd_tools.egg-info/top_level.txt 2026-06-18T03:32:16,187 writing manifest file '/tmp/pip-pip-egg-info-s855ds5p/nifstd_tools.egg-info/SOURCES.txt' 2026-06-18T03:32:16,308 reading manifest file '/tmp/pip-pip-egg-info-s855ds5p/nifstd_tools.egg-info/SOURCES.txt' 2026-06-18T03:32:16,310 adding license file 'LICENSE' 2026-06-18T03:32:16,314 writing manifest file '/tmp/pip-pip-egg-info-s855ds5p/nifstd_tools.egg-info/SOURCES.txt' 2026-06-18T03:32:16,423 Preparing metadata (setup.py): finished with status 'done' 2026-06-18T03:32:16,427 Source in /tmp/pip-wheel-wsf0kmqe/nifstd-tools_3dbffa156683450890783e72b9b10c90 has version 0.0.8, which satisfies requirement nifstd-tools==0.0.8 from https://files.pythonhosted.org/packages/0d/9b/64ef091cf326802931693602bfe2e30e2731ad36bab0979f11996e932579/nifstd_tools-0.0.8.tar.gz 2026-06-18T03:32:16,428 Removed nifstd-tools==0.0.8 from https://files.pythonhosted.org/packages/0d/9b/64ef091cf326802931693602bfe2e30e2731ad36bab0979f11996e932579/nifstd_tools-0.0.8.tar.gz from build tracker '/tmp/pip-build-tracker-egxw1724' 2026-06-18T03:32:16,433 Created temporary directory: /tmp/pip-unpack-3u6cisii 2026-06-18T03:32:16,434 Building wheels for collected packages: nifstd-tools 2026-06-18T03:32:16,438 Created temporary directory: /tmp/pip-wheel-n87jqra3 2026-06-18T03:32:16,439 Building wheel for nifstd-tools (setup.py): started 2026-06-18T03:32:16,440 Destination directory: /tmp/pip-wheel-n87jqra3 2026-06-18T03:32:16,441 Running command python setup.py bdist_wheel 2026-06-18T03:32:16,987 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:287: UserWarning: Unknown distribution option: 'tests_require' 2026-06-18T03:32:16,988 warnings.warn(msg) 2026-06-18T03:32:17,292 running bdist_wheel 2026-06-18T03:32:17,372 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:119: SetuptoolsDeprecationWarning: bdist_wheel.universal is deprecated 2026-06-18T03:32:17,373 !! 2026-06-18T03:32:17,374 ******************************************************************************** 2026-06-18T03:32:17,375 With Python 2.7 end-of-life, support for building universal wheels 2026-06-18T03:32:17,375 (i.e., wheels that support both Python 2 and Python 3) 2026-06-18T03:32:17,375 is being obviated. 2026-06-18T03:32:17,376 Please discontinue using this option, or if you still need it, 2026-06-18T03:32:17,376 file an issue with pypa/setuptools describing your use case. 2026-06-18T03:32:17,377 This deprecation is overdue, please update your project and remove deprecated 2026-06-18T03:32:17,378 calls to avoid build errors in the future. 2026-06-18T03:32:17,378 ******************************************************************************** 2026-06-18T03:32:17,379 !! 2026-06-18T03:32:17,379 self.finalize_options() 2026-06-18T03:32:17,429 running build 2026-06-18T03:32:17,429 running build_py 2026-06-18T03:32:17,462 creating build/lib/nifstd_tools 2026-06-18T03:32:17,464 copying nifstd_tools/chebi_bridge.py -> build/lib/nifstd_tools 2026-06-18T03:32:17,468 copying nifstd_tools/ksdesc_bridge.py -> build/lib/nifstd_tools 2026-06-18T03:32:17,471 copying nifstd_tools/slimgen.py -> build/lib/nifstd_tools 2026-06-18T03:32:17,473 copying nifstd_tools/hbp_parc_output.py -> build/lib/nifstd_tools 2026-06-18T03:32:17,476 copying nifstd_tools/fma_slim.py -> build/lib/nifstd_tools 2026-06-18T03:32:17,478 copying nifstd_tools/ontree.py -> build/lib/nifstd_tools 2026-06-18T03:32:17,482 copying nifstd_tools/nif_cell.py -> build/lib/nifstd_tools 2026-06-18T03:32:17,484 copying nifstd_tools/mapnlxilx.py -> build/lib/nifstd_tools 2026-06-18T03:32:17,487 copying nifstd_tools/allen_transgenic_lines.py -> build/lib/nifstd_tools 2026-06-18T03:32:17,490 copying nifstd_tools/map-identifiers.py -> build/lib/nifstd_tools 2026-06-18T03:32:17,492 copying nifstd_tools/ontree_server.py -> build/lib/nifstd_tools 2026-06-18T03:32:17,494 copying nifstd_tools/dumpnlx.py -> build/lib/nifstd_tools 2026-06-18T03:32:17,496 copying nifstd_tools/docs.py -> build/lib/nifstd_tools 2026-06-18T03:32:17,499 copying nifstd_tools/aba_uberon.py -> build/lib/nifstd_tools 2026-06-18T03:32:17,502 copying nifstd_tools/nifgafix.py -> build/lib/nifstd_tools 2026-06-18T03:32:17,504 copying nifstd_tools/sheets_sparc.py -> build/lib/nifstd_tools 2026-06-18T03:32:17,507 copying nifstd_tools/hbp_merge.py -> build/lib/nifstd_tools 2026-06-18T03:32:17,509 copying nifstd_tools/simplify.py -> build/lib/nifstd_tools 2026-06-18T03:32:17,512 copying nifstd_tools/fragment_map.py -> build/lib/nifstd_tools 2026-06-18T03:32:17,513 copying nifstd_tools/gen_nat_models.py -> build/lib/nifstd_tools 2026-06-18T03:32:17,516 copying nifstd_tools/scr_sync.py -> build/lib/nifstd_tools 2026-06-18T03:32:17,519 copying nifstd_tools/__init__.py -> build/lib/nifstd_tools 2026-06-18T03:32:17,520 copying nifstd_tools/ncbigene_slim.py -> build/lib/nifstd_tools 2026-06-18T03:32:17,523 copying nifstd_tools/sheets.py -> build/lib/nifstd_tools 2026-06-18T03:32:17,525 copying nifstd_tools/extracting_pmids_from_neurolex.py -> build/lib/nifstd_tools 2026-06-18T03:32:17,527 copying nifstd_tools/doid_slim.py -> build/lib/nifstd_tools 2026-06-18T03:32:17,529 copying nifstd_tools/utils.py -> build/lib/nifstd_tools 2026-06-18T03:32:17,532 copying nifstd_tools/chebi_slim.py -> build/lib/nifstd_tools 2026-06-18T03:32:17,537 running build_scripts 2026-06-18T03:32:17,537 creating build/scripts-3.11 2026-06-18T03:32:17,539 copying bin/ttlcmp -> build/scripts-3.11 2026-06-18T03:32:17,568 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2026-06-18T03:32:17,568 !! 2026-06-18T03:32:17,569 ******************************************************************************** 2026-06-18T03:32:17,570 Please avoid running ``setup.py`` directly. 2026-06-18T03:32:17,571 Instead, use pypa/build, pypa/installer or other 2026-06-18T03:32:17,571 standards-based tools. 2026-06-18T03:32:17,572 This deprecation is overdue, please update your project and remove deprecated 2026-06-18T03:32:17,572 calls to avoid build errors in the future. 2026-06-18T03:32:17,573 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2026-06-18T03:32:17,574 ******************************************************************************** 2026-06-18T03:32:17,574 !! 2026-06-18T03:32:17,575 self.initialize_options() 2026-06-18T03:32:17,596 installing to build/bdist.linux-armv7l/wheel 2026-06-18T03:32:17,597 running install 2026-06-18T03:32:17,620 running install_lib 2026-06-18T03:32:17,647 creating build/bdist.linux-armv7l/wheel 2026-06-18T03:32:17,649 creating build/bdist.linux-armv7l/wheel/nifstd_tools 2026-06-18T03:32:17,650 copying build/lib/nifstd_tools/chebi_bridge.py -> build/bdist.linux-armv7l/wheel/./nifstd_tools 2026-06-18T03:32:17,653 copying build/lib/nifstd_tools/ksdesc_bridge.py -> build/bdist.linux-armv7l/wheel/./nifstd_tools 2026-06-18T03:32:17,654 copying build/lib/nifstd_tools/slimgen.py -> build/bdist.linux-armv7l/wheel/./nifstd_tools 2026-06-18T03:32:17,656 copying build/lib/nifstd_tools/hbp_parc_output.py -> build/bdist.linux-armv7l/wheel/./nifstd_tools 2026-06-18T03:32:17,658 copying build/lib/nifstd_tools/fma_slim.py -> build/bdist.linux-armv7l/wheel/./nifstd_tools 2026-06-18T03:32:17,660 copying build/lib/nifstd_tools/ontree.py -> build/bdist.linux-armv7l/wheel/./nifstd_tools 2026-06-18T03:32:17,664 copying build/lib/nifstd_tools/nif_cell.py -> build/bdist.linux-armv7l/wheel/./nifstd_tools 2026-06-18T03:32:17,666 copying build/lib/nifstd_tools/mapnlxilx.py -> build/bdist.linux-armv7l/wheel/./nifstd_tools 2026-06-18T03:32:17,670 copying build/lib/nifstd_tools/allen_transgenic_lines.py -> build/bdist.linux-armv7l/wheel/./nifstd_tools 2026-06-18T03:32:17,683 copying build/lib/nifstd_tools/map-identifiers.py -> build/bdist.linux-armv7l/wheel/./nifstd_tools 2026-06-18T03:32:17,692 copying build/lib/nifstd_tools/ontree_server.py -> build/bdist.linux-armv7l/wheel/./nifstd_tools 2026-06-18T03:32:17,697 copying build/lib/nifstd_tools/dumpnlx.py -> build/bdist.linux-armv7l/wheel/./nifstd_tools 2026-06-18T03:32:17,699 copying build/lib/nifstd_tools/docs.py -> build/bdist.linux-armv7l/wheel/./nifstd_tools 2026-06-18T03:32:17,702 copying build/lib/nifstd_tools/aba_uberon.py -> build/bdist.linux-armv7l/wheel/./nifstd_tools 2026-06-18T03:32:17,705 copying build/lib/nifstd_tools/nifgafix.py -> build/bdist.linux-armv7l/wheel/./nifstd_tools 2026-06-18T03:32:17,707 copying build/lib/nifstd_tools/sheets_sparc.py -> build/bdist.linux-armv7l/wheel/./nifstd_tools 2026-06-18T03:32:17,709 copying build/lib/nifstd_tools/hbp_merge.py -> build/bdist.linux-armv7l/wheel/./nifstd_tools 2026-06-18T03:32:17,711 copying build/lib/nifstd_tools/simplify.py -> build/bdist.linux-armv7l/wheel/./nifstd_tools 2026-06-18T03:32:17,714 copying build/lib/nifstd_tools/fragment_map.py -> build/bdist.linux-armv7l/wheel/./nifstd_tools 2026-06-18T03:32:17,716 copying build/lib/nifstd_tools/gen_nat_models.py -> build/bdist.linux-armv7l/wheel/./nifstd_tools 2026-06-18T03:32:17,718 copying build/lib/nifstd_tools/scr_sync.py -> build/bdist.linux-armv7l/wheel/./nifstd_tools 2026-06-18T03:32:17,721 copying build/lib/nifstd_tools/__init__.py -> build/bdist.linux-armv7l/wheel/./nifstd_tools 2026-06-18T03:32:17,723 copying build/lib/nifstd_tools/ncbigene_slim.py -> build/bdist.linux-armv7l/wheel/./nifstd_tools 2026-06-18T03:32:17,725 copying build/lib/nifstd_tools/sheets.py -> build/bdist.linux-armv7l/wheel/./nifstd_tools 2026-06-18T03:32:17,727 copying build/lib/nifstd_tools/extracting_pmids_from_neurolex.py -> build/bdist.linux-armv7l/wheel/./nifstd_tools 2026-06-18T03:32:17,729 copying build/lib/nifstd_tools/doid_slim.py -> build/bdist.linux-armv7l/wheel/./nifstd_tools 2026-06-18T03:32:17,731 copying build/lib/nifstd_tools/utils.py -> build/bdist.linux-armv7l/wheel/./nifstd_tools 2026-06-18T03:32:17,733 copying build/lib/nifstd_tools/chebi_slim.py -> build/bdist.linux-armv7l/wheel/./nifstd_tools 2026-06-18T03:32:17,736 running install_data 2026-06-18T03:32:17,765 creating build/bdist.linux-armv7l/wheel/nifstd_tools-0.0.8.data/data 2026-06-18T03:32:17,767 creating build/bdist.linux-armv7l/wheel/nifstd_tools-0.0.8.data/data/share/nifstd/resources/sparc_term_versions 2026-06-18T03:32:17,770 copying resources/sparc_term_versions/sparc_terms2-mod.txt -> build/bdist.linux-armv7l/wheel/nifstd_tools-0.0.8.data/data/share/nifstd/resources/sparc_term_versions 2026-06-18T03:32:17,779 copying resources/neuron_phenotype_edges.csv -> build/bdist.linux-armv7l/wheel/nifstd_tools-0.0.8.data/data/share/nifstd/resources 2026-06-18T03:32:17,782 copying resources/26451489 table 1.csv -> build/bdist.linux-armv7l/wheel/nifstd_tools-0.0.8.data/data/share/nifstd/resources 2026-06-18T03:32:17,784 copying resources/docs-init.el -> build/bdist.linux-armv7l/wheel/nifstd_tools-0.0.8.data/data/share/nifstd/resources 2026-06-18T03:32:17,786 copying resources/neuron_phenotype.csv -> build/bdist.linux-armv7l/wheel/nifstd_tools-0.0.8.data/data/share/nifstd/resources 2026-06-18T03:32:17,788 copying resources/doc-config.yaml -> build/bdist.linux-armv7l/wheel/nifstd_tools-0.0.8.data/data/share/nifstd/resources 2026-06-18T03:32:17,790 running install_egg_info 2026-06-18T03:32:17,824 running egg_info 2026-06-18T03:32:17,851 writing nifstd_tools.egg-info/PKG-INFO 2026-06-18T03:32:17,856 writing dependency_links to nifstd_tools.egg-info/dependency_links.txt 2026-06-18T03:32:17,858 writing entry points to nifstd_tools.egg-info/entry_points.txt 2026-06-18T03:32:17,860 writing requirements to nifstd_tools.egg-info/requires.txt 2026-06-18T03:32:17,861 writing top-level names to nifstd_tools.egg-info/top_level.txt 2026-06-18T03:32:17,894 reading manifest file 'nifstd_tools.egg-info/SOURCES.txt' 2026-06-18T03:32:17,899 adding license file 'LICENSE' 2026-06-18T03:32:17,904 writing manifest file 'nifstd_tools.egg-info/SOURCES.txt' 2026-06-18T03:32:17,905 Copying nifstd_tools.egg-info to build/bdist.linux-armv7l/wheel/./nifstd_tools-0.0.8-py3.11.egg-info 2026-06-18T03:32:17,916 running install_scripts 2026-06-18T03:32:17,917 creating build/bdist.linux-armv7l/wheel/nifstd_tools-0.0.8.data/scripts 2026-06-18T03:32:17,918 copying build/scripts-3.11/ttlcmp -> build/bdist.linux-armv7l/wheel/nifstd_tools-0.0.8.data/scripts 2026-06-18T03:32:17,919 changing mode of build/bdist.linux-armv7l/wheel/nifstd_tools-0.0.8.data/scripts/ttlcmp to 755 2026-06-18T03:32:17,931 creating build/bdist.linux-armv7l/wheel/nifstd_tools-0.0.8.dist-info/WHEEL 2026-06-18T03:32:17,934 creating '/tmp/pip-wheel-n87jqra3/nifstd_tools-0.0.8-py2.py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-06-18T03:32:17,936 adding 'nifstd_tools/__init__.py' 2026-06-18T03:32:17,938 adding 'nifstd_tools/aba_uberon.py' 2026-06-18T03:32:17,940 adding 'nifstd_tools/allen_transgenic_lines.py' 2026-06-18T03:32:17,942 adding 'nifstd_tools/chebi_bridge.py' 2026-06-18T03:32:17,944 adding 'nifstd_tools/chebi_slim.py' 2026-06-18T03:32:17,950 adding 'nifstd_tools/docs.py' 2026-06-18T03:32:17,952 adding 'nifstd_tools/doid_slim.py' 2026-06-18T03:32:17,954 adding 'nifstd_tools/dumpnlx.py' 2026-06-18T03:32:17,956 adding 'nifstd_tools/extracting_pmids_from_neurolex.py' 2026-06-18T03:32:17,958 adding 'nifstd_tools/fma_slim.py' 2026-06-18T03:32:17,959 adding 'nifstd_tools/fragment_map.py' 2026-06-18T03:32:17,960 adding 'nifstd_tools/gen_nat_models.py' 2026-06-18T03:32:17,961 adding 'nifstd_tools/hbp_merge.py' 2026-06-18T03:32:17,963 adding 'nifstd_tools/hbp_parc_output.py' 2026-06-18T03:32:17,964 adding 'nifstd_tools/ksdesc_bridge.py' 2026-06-18T03:32:17,966 adding 'nifstd_tools/map-identifiers.py' 2026-06-18T03:32:17,969 adding 'nifstd_tools/mapnlxilx.py' 2026-06-18T03:32:17,971 adding 'nifstd_tools/ncbigene_slim.py' 2026-06-18T03:32:17,972 adding 'nifstd_tools/nif_cell.py' 2026-06-18T03:32:17,973 adding 'nifstd_tools/nifgafix.py' 2026-06-18T03:32:17,978 adding 'nifstd_tools/ontree.py' 2026-06-18T03:32:17,979 adding 'nifstd_tools/ontree_server.py' 2026-06-18T03:32:17,982 adding 'nifstd_tools/scr_sync.py' 2026-06-18T03:32:17,984 adding 'nifstd_tools/sheets.py' 2026-06-18T03:32:17,986 adding 'nifstd_tools/sheets_sparc.py' 2026-06-18T03:32:17,988 adding 'nifstd_tools/simplify.py' 2026-06-18T03:32:17,990 adding 'nifstd_tools/slimgen.py' 2026-06-18T03:32:17,991 adding 'nifstd_tools/utils.py' 2026-06-18T03:32:17,998 adding 'nifstd_tools-0.0.8.data/data/share/nifstd/resources/26451489 table 1.csv' 2026-06-18T03:32:18,000 adding 'nifstd_tools-0.0.8.data/data/share/nifstd/resources/doc-config.yaml' 2026-06-18T03:32:18,001 adding 'nifstd_tools-0.0.8.data/data/share/nifstd/resources/docs-init.el' 2026-06-18T03:32:18,003 adding 'nifstd_tools-0.0.8.data/data/share/nifstd/resources/neuron_phenotype.csv' 2026-06-18T03:32:18,006 adding 'nifstd_tools-0.0.8.data/data/share/nifstd/resources/neuron_phenotype_edges.csv' 2026-06-18T03:32:18,045 adding 'nifstd_tools-0.0.8.data/data/share/nifstd/resources/sparc_term_versions/sparc_terms2-mod.txt' 2026-06-18T03:32:18,050 adding 'nifstd_tools-0.0.8.data/scripts/ttlcmp' 2026-06-18T03:32:18,053 adding 'nifstd_tools-0.0.8.dist-info/licenses/LICENSE' 2026-06-18T03:32:18,054 adding 'nifstd_tools-0.0.8.dist-info/METADATA' 2026-06-18T03:32:18,055 adding 'nifstd_tools-0.0.8.dist-info/WHEEL' 2026-06-18T03:32:18,056 adding 'nifstd_tools-0.0.8.dist-info/entry_points.txt' 2026-06-18T03:32:18,057 adding 'nifstd_tools-0.0.8.dist-info/top_level.txt' 2026-06-18T03:32:18,058 adding 'nifstd_tools-0.0.8.dist-info/RECORD' 2026-06-18T03:32:18,062 removing build/bdist.linux-armv7l/wheel 2026-06-18T03:32:18,203 Building wheel for nifstd-tools (setup.py): finished with status 'done' 2026-06-18T03:32:18,209 Created wheel for nifstd-tools: filename=nifstd_tools-0.0.8-py2.py3-none-any.whl size=168960 sha256=18c483a45ea765175ce617017a7333f32f5e18e2b5e77b1e0f00dfbf2d88dc94 2026-06-18T03:32:18,211 Stored in directory: /tmp/pip-ephem-wheel-cache-a5grh6qg/wheels/96/37/2a/210ba7eba7ce3e4e58cf14b17316d4b956538707f1af88eb08 2026-06-18T03:32:18,225 Successfully built nifstd-tools 2026-06-18T03:32:18,232 Removed build tracker: '/tmp/pip-build-tracker-egxw1724'