2026-06-28T18:42:04,076 Created temporary directory: /tmp/pip-ephem-wheel-cache-wnfzj35n 2026-06-28T18:42:04,078 Created temporary directory: /tmp/pip-build-tracker-6af7i3zl 2026-06-28T18:42:04,079 Initialized build tracking at /tmp/pip-build-tracker-6af7i3zl 2026-06-28T18:42:04,079 Created build tracker: /tmp/pip-build-tracker-6af7i3zl 2026-06-28T18:42:04,080 Entered build tracker: /tmp/pip-build-tracker-6af7i3zl 2026-06-28T18:42:04,080 Created temporary directory: /tmp/pip-wheel-2kgta4p4 2026-06-28T18:42:04,083 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-06-28T18:42:04,086 Created temporary directory: /tmp/pip-ephem-wheel-cache-m7icvi1r 2026-06-28T18:42:04,107 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-06-28T18:42:04,111 2 location(s) to search for versions of soursop: 2026-06-28T18:42:04,111 * https://pypi.org/simple/soursop/ 2026-06-28T18:42:04,111 * https://www.piwheels.org/simple/soursop/ 2026-06-28T18:42:04,112 Fetching project page and analyzing links: https://pypi.org/simple/soursop/ 2026-06-28T18:42:04,112 Getting page https://pypi.org/simple/soursop/ 2026-06-28T18:42:04,114 Found index url https://pypi.org/simple 2026-06-28T18:42:04,365 Fetched page https://pypi.org/simple/soursop/ as application/vnd.pypi.simple.v1+json 2026-06-28T18:42:04,368 Found link https://files.pythonhosted.org/packages/9d/4f/ddf85b2a407fb41c9fd04f26f2e8761c1d31c43b42fc6828a8bf18145f89/soursop-0.1.6.tar.gz (from https://pypi.org/simple/soursop/), version: 0.1.6 2026-06-28T18:42:04,369 Found link https://files.pythonhosted.org/packages/d9/67/f6e2c070bdb22cb1bd094c33934099f9aab0a3ee0034b0893d238dedc0d4/soursop-0.1.9.tar.gz (from https://pypi.org/simple/soursop/), version: 0.1.9 2026-06-28T18:42:04,370 Found link https://files.pythonhosted.org/packages/d0/28/a4e1b5066e10ff76cbce5029c92c9ba6b0b85d97d8ffd548df453b40f251/soursop-0.1.9.2.tar.gz (from https://pypi.org/simple/soursop/), version: 0.1.9.2 2026-06-28T18:42:04,371 Found link https://files.pythonhosted.org/packages/06/82/f60f9e8d635865a8c5a901dcdf07b976757bae53999d55ee8ba779550c9b/soursop-0.2.1.tar.gz (from https://pypi.org/simple/soursop/), version: 0.2.1 2026-06-28T18:42:04,371 Found link https://files.pythonhosted.org/packages/fb/54/e5eea4c8b537346c5ef3fd71c1fbebc95808d69705c1889078fb9d03fae1/soursop-0.2.2.tar.gz (from https://pypi.org/simple/soursop/), version: 0.2.2 2026-06-28T18:42:04,372 Found link https://files.pythonhosted.org/packages/a5/28/bf3486fecbce619002890de298d0a5e11c10f6cfb2d6efced4046f1b45d1/soursop-0.2.3.tar.gz (from https://pypi.org/simple/soursop/), version: 0.2.3 2026-06-28T18:42:04,373 Found link https://files.pythonhosted.org/packages/46/7c/ed0d47073b28595abdca03340c287aee27521ff39bf1f7b9fb86f8fb58b0/soursop-0.2.4.tar.gz (from https://pypi.org/simple/soursop/), version: 0.2.4 2026-06-28T18:42:04,374 Found link https://files.pythonhosted.org/packages/e6/fa/65b818eb75b238b0c0ee787e7b96e0c87971966f94005eba7a70e6091b8a/soursop-0.2.6.tar.gz (from https://pypi.org/simple/soursop/) (requires-python:>=3.7), version: 0.2.6 2026-06-28T18:42:04,375 Found link https://files.pythonhosted.org/packages/58/df/c33e777ce361d71d3113401f96c5122f3ac82a368a06471eea8992a670b0/soursop-0.2.7.tar.gz (from https://pypi.org/simple/soursop/) (requires-python:>=3.7), version: 0.2.7 2026-06-28T18:42:04,376 Skipping link: No binaries permitted for soursop: https://files.pythonhosted.org/packages/88/85/66aa81a4c3a856428de8c309777d517616c71fc52eaa4684f202c4857602/soursop-2.0.0-py3-none-any.whl (from https://pypi.org/simple/soursop/) (requires-python:>=3.9) 2026-06-28T18:42:04,377 Found link https://files.pythonhosted.org/packages/7b/e9/db4cc7a15180bc2996607cd1f242dbc5db17b6011f8c23eee963c379815d/soursop-2.0.0.tar.gz (from https://pypi.org/simple/soursop/) (requires-python:>=3.9), version: 2.0.0 2026-06-28T18:42:04,378 Skipping link: No binaries permitted for soursop: https://files.pythonhosted.org/packages/36/bf/8aac7dcab235c03edce1d2896d3e31751648e9141d87b9deff742fe4c747/soursop-2.0.1-py3-none-any.whl (from https://pypi.org/simple/soursop/) (requires-python:>=3.9) 2026-06-28T18:42:04,379 Found link https://files.pythonhosted.org/packages/30/95/969d59dc2e485f2f7ec94fc7c700ab406b0901cc060c203be656e76b67a2/soursop-2.0.1.tar.gz (from https://pypi.org/simple/soursop/) (requires-python:>=3.9), version: 2.0.1 2026-06-28T18:42:04,380 Fetching project page and analyzing links: https://www.piwheels.org/simple/soursop/ 2026-06-28T18:42:04,380 Getting page https://www.piwheels.org/simple/soursop/ 2026-06-28T18:42:04,381 Found index url https://www.piwheels.org/simple 2026-06-28T18:42:04,674 Fetched page https://www.piwheels.org/simple/soursop/ as text/html 2026-06-28T18:42:04,678 Skipping link: No binaries permitted for soursop: https://www.piwheels.org/simple/soursop/soursop-2.0.0-py3-none-any.whl#sha256=e562be77127b251c89a8db2124be54122427a870b499d1736231d9b417b69d5a (from https://www.piwheels.org/simple/soursop/) (requires-python:>=3.9) 2026-06-28T18:42:04,679 Skipping link: No binaries permitted for soursop: https://archive1.piwheels.org/simple/soursop/soursop-0.2.7-py3-none-any.whl#sha256=2573288c8dff7321fe570f816f3ec9c19c35d75d7a625bc61c951f36a0553030 (from https://www.piwheels.org/simple/soursop/) (requires-python:>=3.7) 2026-06-28T18:42:04,679 Skipping link: No binaries permitted for soursop: https://archive1.piwheels.org/simple/soursop/SOURSOP-0.2.6-py3-none-any.whl#sha256=b7be5c56a4e069bdcfbe0d571b4668d19c0c6eef3f3c053b0396ca9731466a7d (from https://www.piwheels.org/simple/soursop/) (requires-python:>=3.7) 2026-06-28T18:42:04,680 Skipping link: No binaries permitted for soursop: https://archive1.piwheels.org/simple/soursop/soursop-0.2.4-py3-none-any.whl#sha256=055ad6785e64d9645ecafa7e8eba055df44f8ddc2ef3d42691c30bf5a48017d0 (from https://www.piwheels.org/simple/soursop/) 2026-06-28T18:42:04,680 Skipping link: No binaries permitted for soursop: https://archive1.piwheels.org/simple/soursop/soursop-0.2.3-py3-none-any.whl#sha256=b0fb676d2e457d91b2fef4bf94c4258a983cd3836d0dc771a2079aea2e5169a5 (from https://www.piwheels.org/simple/soursop/) 2026-06-28T18:42:04,681 Skipping link: No binaries permitted for soursop: https://archive1.piwheels.org/simple/soursop/soursop-0.2.2-py3-none-any.whl#sha256=193a5f2f73e4da4acd2750f0cc1f7f5240697dd215ab44e16376e36af6d9f19a (from https://www.piwheels.org/simple/soursop/) 2026-06-28T18:42:04,681 Skipping link: No binaries permitted for soursop: https://archive1.piwheels.org/simple/soursop/soursop-0.2.1-py3-none-any.whl#sha256=a02cbaf07bdd2b38a4e83593f9c40be1ba59b43ed30a580a0cab670406fe4cc3 (from https://www.piwheels.org/simple/soursop/) 2026-06-28T18:42:04,682 Skipping link: No binaries permitted for soursop: https://archive1.piwheels.org/simple/soursop/soursop-0.1.9.2-py3-none-any.whl#sha256=38f02f96c99d39c61c4b99229ec88dc1eef708d72d3e4eeb32241e84492d5df2 (from https://www.piwheels.org/simple/soursop/) 2026-06-28T18:42:04,683 Skipping link: No binaries permitted for soursop: https://archive1.piwheels.org/simple/soursop/soursop-0.1.9-py3-none-any.whl#sha256=14de7fb938ee36216f3e7bd8b74f3f4e87dfe5388e46e0efd5ecf50c47a52aa9 (from https://www.piwheels.org/simple/soursop/) 2026-06-28T18:42:04,683 Skipping link: No binaries permitted for soursop: https://archive1.piwheels.org/simple/soursop/soursop-0.1.6-py3-none-any.whl#sha256=30d39e6ce8c0fe82b8f61b0bb9f711563583bc0b2b891e81c6c730b14371ab7e (from https://www.piwheels.org/simple/soursop/) 2026-06-28T18:42:04,684 Skipping link: not a file: https://www.piwheels.org/simple/soursop/ 2026-06-28T18:42:04,684 Skipping link: not a file: https://pypi.org/simple/soursop/ 2026-06-28T18:42:04,704 Given no hashes to check 1 links for project 'soursop': discarding no candidates 2026-06-28T18:42:04,722 Collecting soursop==2.0.1 2026-06-28T18:42:04,724 Created temporary directory: /tmp/pip-unpack-1tjzahxp 2026-06-28T18:42:05,058 Downloading soursop-2.0.1.tar.gz (12.2 MB) 2026-06-28T18:42:07,999 Added soursop==2.0.1 from https://files.pythonhosted.org/packages/30/95/969d59dc2e485f2f7ec94fc7c700ab406b0901cc060c203be656e76b67a2/soursop-2.0.1.tar.gz to build tracker '/tmp/pip-build-tracker-6af7i3zl' 2026-06-28T18:42:08,007 Created temporary directory: /tmp/pip-build-env-ne6mjp6j 2026-06-28T18:42:08,011 Installing build dependencies: started 2026-06-28T18:42:08,012 Running command pip subprocess to install build dependencies 2026-06-28T18:42:09,157 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-06-28T18:42:09,574 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-06-28T18:42:09,597 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-06-28T18:42:11,599 Collecting setuptools>=61 2026-06-28T18:42:11,601 Obtaining dependency information for setuptools>=61 from https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl.metadata 2026-06-28T18:42:11,615 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl.metadata (6.5 kB) 2026-06-28T18:42:11,745 Collecting versioningit~=2.0 2026-06-28T18:42:11,747 Obtaining dependency information for versioningit~=2.0 from https://archive1.piwheels.org/simple/versioningit/versioningit-2.3.0-py3-none-any.whl.metadata 2026-06-28T18:42:12,068 Downloading https://archive1.piwheels.org/simple/versioningit/versioningit-2.3.0-py3-none-any.whl.metadata (9.4 kB) 2026-06-28T18:42:13,183 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/3a/be/650f9c091ef71cb01d735775d554e068752d3ff63d7943b26316dc401749/numpy-1.21.2.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2026-06-28T18:42:13,191 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/5f/d6/ad58ded26556eaeaa8c971e08b6466f17c4ac4d786cd3d800e26ce59cc01/numpy-1.21.3.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2026-06-28T18:42:13,198 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/fb/48/b0708ebd7718a8933f0d3937513ef8ef2f4f04529f1f66ca86d873043921/numpy-1.21.4.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2026-06-28T18:42:13,205 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/c2/a8/a924a09492bdfee8c2ec3094d0a13f2799800b4fdc9c890738aeeb12c72e/numpy-1.21.5.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2026-06-28T18:42:13,212 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/45/b7/de7b8e67f2232c26af57c205aaad29fe17754f793404f59c8a730c7a191a/numpy-1.21.6.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2026-06-28T18:42:13,651 Link requires a different Python (3.11.2 not in: '>=3.12'): https://files.pythonhosted.org/packages/d3/e1/f2fe8f6113a657a1da83b358b16755e528a602c6976a43724a88f42b482a/numpy-2.5.0rc1.tar.gz (from https://pypi.org/simple/numpy/) (requires-python:>=3.12) 2026-06-28T18:42:13,661 Link requires a different Python (3.11.2 not in: '>=3.12'): https://files.pythonhosted.org/packages/e7/05/3d27272d30698dc0ecb7fdfaa41ad70303b444f81722bb99bce1d818638a/numpy-2.5.0.tar.gz (from https://pypi.org/simple/numpy/) (requires-python:>=3.12) 2026-06-28T18:42:13,982 Collecting numpy 2026-06-28T18:42:13,983 Obtaining dependency information for numpy from https://www.piwheels.org/simple/numpy/numpy-2.4.6-cp311-cp311-linux_armv7l.whl.metadata 2026-06-28T18:42:13,998 Using cached https://www.piwheels.org/simple/numpy/numpy-2.4.6-cp311-cp311-linux_armv7l.whl.metadata (6.6 kB) 2026-06-28T18:42:14,200 Collecting packaging>=17.1 2026-06-28T18:42:14,201 Obtaining dependency information for packaging>=17.1 from https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata 2026-06-28T18:42:14,213 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata (3.5 kB) 2026-06-28T18:42:14,992 Downloading https://archive1.piwheels.org/simple/versioningit/versioningit-2.3.0-py3-none-any.whl (35 kB) 2026-06-28T18:42:15,460 Using cached https://www.piwheels.org/simple/numpy/numpy-2.4.6-cp311-cp311-linux_armv7l.whl (6.3 MB) 2026-06-28T18:42:15,604 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB) 2026-06-28T18:42:15,697 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-06-28T18:42:15,729 Using cached https://archive1.piwheels.org/simple/versioningit/versioningit-2.3.0-py3-none-any.whl (35 kB) 2026-06-28T18:42:16,168 Using cached https://www.piwheels.org/simple/numpy/numpy-2.4.6-cp311-cp311-linux_armv7l.whl (6.3 MB) 2026-06-28T18:42:16,381 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB) 2026-06-28T18:42:16,472 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.1-py3-none-any.whl (1.0 MB) 2026-06-28T18:42:19,200 Installing collected packages: setuptools, packaging, numpy, versioningit 2026-06-28T18:42:31,449 Creating /tmp/pip-build-env-ne6mjp6j/overlay/local/bin 2026-06-28T18:42:31,452 changing mode of /tmp/pip-build-env-ne6mjp6j/overlay/local/bin/f2py to 755 2026-06-28T18:42:31,454 changing mode of /tmp/pip-build-env-ne6mjp6j/overlay/local/bin/numpy-config to 755 2026-06-28T18:42:31,616 changing mode of /tmp/pip-build-env-ne6mjp6j/overlay/local/bin/versioningit to 755 2026-06-28T18:42:31,647 Successfully installed numpy-2.4.6 packaging-26.2 setuptools-82.0.1 versioningit-2.3.0 2026-06-28T18:42:32,032 Installing build dependencies: finished with status 'done' 2026-06-28T18:42:32,039 Getting requirements to build wheel: started 2026-06-28T18:42:32,041 Running command Getting requirements to build wheel 2026-06-28T18:42:32,725 /tmp/pip-build-env-ne6mjp6j/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-06-28T18:42:32,725 !! 2026-06-28T18:42:32,726 ******************************************************************************** 2026-06-28T18:42:32,727 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-06-28T18:42:32,728 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-06-28T18:42:32,728 or your builds will no longer be supported. 2026-06-28T18:42:32,729 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-06-28T18:42:32,730 ******************************************************************************** 2026-06-28T18:42:32,731 !! 2026-06-28T18:42:32,732 corresp(dist, value, root_dir) 2026-06-28T18:42:32,806 /tmp/pip-build-env-ne6mjp6j/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-06-28T18:42:32,807 !! 2026-06-28T18:42:32,808 ******************************************************************************** 2026-06-28T18:42:32,808 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-06-28T18:42:32,810 License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3) 2026-06-28T18:42:32,812 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-06-28T18:42:32,812 ******************************************************************************** 2026-06-28T18:42:32,813 !! 2026-06-28T18:42:32,813 dist._finalize_license_expression() 2026-06-28T18:42:32,814 /tmp/pip-build-env-ne6mjp6j/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-06-28T18:42:32,814 !! 2026-06-28T18:42:32,815 ******************************************************************************** 2026-06-28T18:42:32,816 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-06-28T18:42:32,817 License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3) 2026-06-28T18:42:32,818 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-06-28T18:42:32,818 ******************************************************************************** 2026-06-28T18:42:32,819 !! 2026-06-28T18:42:32,820 self._finalize_license_expression() 2026-06-28T18:42:32,820 running egg_info 2026-06-28T18:42:32,825 writing SOURSOP.egg-info/PKG-INFO 2026-06-28T18:42:32,829 writing dependency_links to SOURSOP.egg-info/dependency_links.txt 2026-06-28T18:42:32,831 writing requirements to SOURSOP.egg-info/requires.txt 2026-06-28T18:42:32,833 writing top-level names to SOURSOP.egg-info/top_level.txt 2026-06-28T18:42:32,880 reading manifest file 'SOURSOP.egg-info/SOURCES.txt' 2026-06-28T18:42:32,888 reading manifest template 'MANIFEST.in' 2026-06-28T18:42:32,899 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2026-06-28T18:42:32,900 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2026-06-28T18:42:32,901 warning: no previously-included files matching '*.so' found anywhere in distribution 2026-06-28T18:42:32,934 adding license file 'LICENSE' 2026-06-28T18:42:32,942 writing manifest file 'SOURSOP.egg-info/SOURCES.txt' 2026-06-28T18:42:33,043 Getting requirements to build wheel: finished with status 'done' 2026-06-28T18:42:33,047 Created temporary directory: /tmp/pip-modern-metadata-l5xq31e8 2026-06-28T18:42:33,049 Preparing metadata (pyproject.toml): started 2026-06-28T18:42:33,050 Running command Preparing metadata (pyproject.toml) 2026-06-28T18:42:33,671 /tmp/pip-build-env-ne6mjp6j/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-06-28T18:42:33,671 !! 2026-06-28T18:42:33,672 ******************************************************************************** 2026-06-28T18:42:33,673 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-06-28T18:42:33,674 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-06-28T18:42:33,674 or your builds will no longer be supported. 2026-06-28T18:42:33,676 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-06-28T18:42:33,676 ******************************************************************************** 2026-06-28T18:42:33,677 !! 2026-06-28T18:42:33,678 corresp(dist, value, root_dir) 2026-06-28T18:42:33,750 /tmp/pip-build-env-ne6mjp6j/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-06-28T18:42:33,751 !! 2026-06-28T18:42:33,752 ******************************************************************************** 2026-06-28T18:42:33,753 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-06-28T18:42:33,754 License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3) 2026-06-28T18:42:33,755 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-06-28T18:42:33,755 ******************************************************************************** 2026-06-28T18:42:33,756 !! 2026-06-28T18:42:33,757 dist._finalize_license_expression() 2026-06-28T18:42:33,757 /tmp/pip-build-env-ne6mjp6j/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-06-28T18:42:33,758 !! 2026-06-28T18:42:33,759 ******************************************************************************** 2026-06-28T18:42:33,759 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-06-28T18:42:33,760 License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3) 2026-06-28T18:42:33,761 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-06-28T18:42:33,761 ******************************************************************************** 2026-06-28T18:42:33,762 !! 2026-06-28T18:42:33,763 self._finalize_license_expression() 2026-06-28T18:42:33,765 running dist_info 2026-06-28T18:42:33,779 creating /tmp/pip-modern-metadata-l5xq31e8/SOURSOP.egg-info 2026-06-28T18:42:33,780 writing /tmp/pip-modern-metadata-l5xq31e8/SOURSOP.egg-info/PKG-INFO 2026-06-28T18:42:33,785 writing dependency_links to /tmp/pip-modern-metadata-l5xq31e8/SOURSOP.egg-info/dependency_links.txt 2026-06-28T18:42:33,787 writing requirements to /tmp/pip-modern-metadata-l5xq31e8/SOURSOP.egg-info/requires.txt 2026-06-28T18:42:33,788 writing top-level names to /tmp/pip-modern-metadata-l5xq31e8/SOURSOP.egg-info/top_level.txt 2026-06-28T18:42:33,790 writing manifest file '/tmp/pip-modern-metadata-l5xq31e8/SOURSOP.egg-info/SOURCES.txt' 2026-06-28T18:42:33,827 reading manifest file '/tmp/pip-modern-metadata-l5xq31e8/SOURSOP.egg-info/SOURCES.txt' 2026-06-28T18:42:33,829 reading manifest template 'MANIFEST.in' 2026-06-28T18:42:33,840 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2026-06-28T18:42:33,841 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2026-06-28T18:42:33,842 warning: no previously-included files matching '*.so' found anywhere in distribution 2026-06-28T18:42:33,874 adding license file 'LICENSE' 2026-06-28T18:42:33,881 writing manifest file '/tmp/pip-modern-metadata-l5xq31e8/SOURSOP.egg-info/SOURCES.txt' 2026-06-28T18:42:33,883 creating '/tmp/pip-modern-metadata-l5xq31e8/soursop-2.0.1.dist-info' 2026-06-28T18:42:34,013 Preparing metadata (pyproject.toml): finished with status 'done' 2026-06-28T18:42:34,018 Source in /tmp/pip-wheel-2kgta4p4/soursop_aa6d481866804a2c8e9f7d7b441ac0ba has version 2.0.1, which satisfies requirement soursop==2.0.1 from https://files.pythonhosted.org/packages/30/95/969d59dc2e485f2f7ec94fc7c700ab406b0901cc060c203be656e76b67a2/soursop-2.0.1.tar.gz 2026-06-28T18:42:34,019 Removed soursop==2.0.1 from https://files.pythonhosted.org/packages/30/95/969d59dc2e485f2f7ec94fc7c700ab406b0901cc060c203be656e76b67a2/soursop-2.0.1.tar.gz from build tracker '/tmp/pip-build-tracker-6af7i3zl' 2026-06-28T18:42:34,025 Created temporary directory: /tmp/pip-unpack-90wjq9p8 2026-06-28T18:42:34,026 Building wheels for collected packages: soursop 2026-06-28T18:42:34,031 Created temporary directory: /tmp/pip-wheel-fkw6gdn9 2026-06-28T18:42:34,031 Destination directory: /tmp/pip-wheel-fkw6gdn9 2026-06-28T18:42:34,034 Building wheel for soursop (pyproject.toml): started 2026-06-28T18:42:34,035 Running command Building wheel for soursop (pyproject.toml) 2026-06-28T18:42:34,647 /tmp/pip-build-env-ne6mjp6j/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-06-28T18:42:34,647 !! 2026-06-28T18:42:34,648 ******************************************************************************** 2026-06-28T18:42:34,649 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-06-28T18:42:34,650 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-06-28T18:42:34,650 or your builds will no longer be supported. 2026-06-28T18:42:34,651 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-06-28T18:42:34,652 ******************************************************************************** 2026-06-28T18:42:34,653 !! 2026-06-28T18:42:34,653 corresp(dist, value, root_dir) 2026-06-28T18:42:34,719 /tmp/pip-build-env-ne6mjp6j/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-06-28T18:42:34,720 !! 2026-06-28T18:42:34,721 ******************************************************************************** 2026-06-28T18:42:34,722 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-06-28T18:42:34,723 License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3) 2026-06-28T18:42:34,724 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-06-28T18:42:34,724 ******************************************************************************** 2026-06-28T18:42:34,725 !! 2026-06-28T18:42:34,726 dist._finalize_license_expression() 2026-06-28T18:42:34,726 /tmp/pip-build-env-ne6mjp6j/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-06-28T18:42:34,727 !! 2026-06-28T18:42:34,728 ******************************************************************************** 2026-06-28T18:42:34,729 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-06-28T18:42:34,730 License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3) 2026-06-28T18:42:34,732 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-06-28T18:42:34,732 ******************************************************************************** 2026-06-28T18:42:34,733 !! 2026-06-28T18:42:34,734 self._finalize_license_expression() 2026-06-28T18:42:34,735 running bdist_wheel 2026-06-28T18:42:34,754 running build 2026-06-28T18:42:34,755 running build_py 2026-06-28T18:42:34,763 creating build/lib/soursop 2026-06-28T18:42:34,767 copying soursop/sssampling.py -> build/lib/soursop 2026-06-28T18:42:34,771 copying soursop/_version.py -> build/lib/soursop 2026-06-28T18:42:34,773 copying soursop/ssnmr.py -> build/lib/soursop 2026-06-28T18:42:34,776 copying soursop/sstools.py -> build/lib/soursop 2026-06-28T18:42:34,778 copying soursop/sscoper.py -> build/lib/soursop 2026-06-28T18:42:34,781 copying soursop/ssdata.py -> build/lib/soursop 2026-06-28T18:42:34,783 copying soursop/__init__.py -> build/lib/soursop 2026-06-28T18:42:34,785 copying soursop/configs.py -> build/lib/soursop 2026-06-28T18:42:34,787 copying soursop/ssio.py -> build/lib/soursop 2026-06-28T18:42:34,789 copying soursop/ssmutualinformation.py -> build/lib/soursop 2026-06-28T18:42:34,791 copying soursop/sstrajectory.py -> build/lib/soursop 2026-06-28T18:42:34,795 copying soursop/soursop.py -> build/lib/soursop 2026-06-28T18:42:34,797 copying soursop/ssprotein.py -> build/lib/soursop 2026-06-28T18:42:34,804 copying soursop/ssutils.py -> build/lib/soursop 2026-06-28T18:42:34,807 copying soursop/ssbme.py -> build/lib/soursop 2026-06-28T18:42:34,811 copying soursop/_internal_data.py -> build/lib/soursop 2026-06-28T18:42:34,814 copying soursop/sspolymer.py -> build/lib/soursop 2026-06-28T18:42:34,816 copying soursop/ssexceptions.py -> build/lib/soursop 2026-06-28T18:42:34,817 copying soursop/sspre.py -> build/lib/soursop 2026-06-28T18:42:34,820 copying soursop/sshdx.py -> build/lib/soursop 2026-06-28T18:42:34,823 creating build/lib/soursop/plugins 2026-06-28T18:42:34,824 copying soursop/plugins/__init__.py -> build/lib/soursop/plugins 2026-06-28T18:42:34,826 creating build/lib/soursop/tests 2026-06-28T18:42:34,827 copying soursop/tests/test_ssnmr.py -> build/lib/soursop/tests 2026-06-28T18:42:34,830 copying soursop/tests/test_ssbme.py -> build/lib/soursop/tests 2026-06-28T18:42:34,833 copying soursop/tests/test_sspre.py -> build/lib/soursop/tests 2026-06-28T18:42:34,835 copying soursop/tests/test_ssproteins.py -> build/lib/soursop/tests 2026-06-28T18:42:34,838 copying soursop/tests/test_reference_observables.py -> build/lib/soursop/tests 2026-06-28T18:42:34,840 copying soursop/tests/test_ssutils.py -> build/lib/soursop/tests 2026-06-28T18:42:34,842 copying soursop/tests/__init__.py -> build/lib/soursop/tests 2026-06-28T18:42:34,843 copying soursop/tests/test_sstrajectory.py -> build/lib/soursop/tests 2026-06-28T18:42:34,846 copying soursop/tests/test_sssampling.py -> build/lib/soursop/tests 2026-06-28T18:42:34,848 copying soursop/tests/conftest.py -> build/lib/soursop/tests 2026-06-28T18:42:34,850 copying soursop/tests/test_ssmutual_information.py -> build/lib/soursop/tests 2026-06-28T18:42:34,852 copying soursop/tests/test_ssnmr_extended.py -> build/lib/soursop/tests 2026-06-28T18:42:34,854 copying soursop/tests/test_sshdx.py -> build/lib/soursop/tests 2026-06-28T18:42:34,856 copying soursop/tests/test_sscoper.py -> build/lib/soursop/tests 2026-06-28T18:42:34,859 copying soursop/tests/test_caps.py -> build/lib/soursop/tests 2026-06-28T18:42:34,861 copying soursop/tests/test_swan.py -> build/lib/soursop/tests 2026-06-28T18:42:34,863 copying soursop/tests/test_soursop.py -> build/lib/soursop/tests 2026-06-28T18:42:34,865 copying soursop/tests/test_weights.py -> build/lib/soursop/tests 2026-06-28T18:42:34,874 creating build/lib/soursop/plugins/sparrow_plugin 2026-06-28T18:42:34,875 copying soursop/plugins/sparrow_plugin/__init__.py -> build/lib/soursop/plugins/sparrow_plugin 2026-06-28T18:42:34,877 creating build/lib/soursop/tests/build_reference 2026-06-28T18:42:34,878 copying soursop/tests/build_reference/__init__.py -> build/lib/soursop/tests/build_reference 2026-06-28T18:42:34,880 copying soursop/tests/build_reference/build_references.py -> build/lib/soursop/tests/build_reference 2026-06-28T18:42:34,883 running egg_info 2026-06-28T18:42:34,896 writing SOURSOP.egg-info/PKG-INFO 2026-06-28T18:42:34,900 writing dependency_links to SOURSOP.egg-info/dependency_links.txt 2026-06-28T18:42:34,901 writing requirements to SOURSOP.egg-info/requires.txt 2026-06-28T18:42:34,902 writing top-level names to SOURSOP.egg-info/top_level.txt 2026-06-28T18:42:34,928 reading manifest file 'SOURSOP.egg-info/SOURCES.txt' 2026-06-28T18:42:34,936 reading manifest template 'MANIFEST.in' 2026-06-28T18:42:34,946 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2026-06-28T18:42:34,947 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2026-06-28T18:42:34,948 warning: no previously-included files matching '*.so' found anywhere in distribution 2026-06-28T18:42:34,979 adding license file 'LICENSE' 2026-06-28T18:42:34,988 writing manifest file 'SOURSOP.egg-info/SOURCES.txt' 2026-06-28T18:42:35,003 creating build/lib/soursop/data 2026-06-28T18:42:35,004 copying soursop/data/SASA_SUMMARY.csv -> build/lib/soursop/data 2026-06-28T18:42:35,007 copying soursop/data/bbseg2.dat -> build/lib/soursop/data 2026-06-28T18:42:35,009 copying soursop/data/phi_excluded_volume_tripeptides.pickle -> build/lib/soursop/data 2026-06-28T18:42:35,028 copying soursop/data/psi_excluded_volume_tripeptides.pickle -> build/lib/soursop/data 2026-06-28T18:42:35,045 copying soursop/tests/test_scratchpad.ipynb -> build/lib/soursop/tests 2026-06-28T18:42:35,050 creating build/lib/soursop/data/test_data 2026-06-28T18:42:35,050 copying soursop/data/test_data/all_residues_AA.pdb -> build/lib/soursop/data/test_data 2026-06-28T18:42:35,053 copying soursop/data/test_data/all_residues_AA.xtc -> build/lib/soursop/data/test_data 2026-06-28T18:42:35,056 copying soursop/data/test_data/ctl9_AA.pdb -> build/lib/soursop/data/test_data 2026-06-28T18:42:35,060 copying soursop/data/test_data/ctl9_AA.xtc -> build/lib/soursop/data/test_data 2026-06-28T18:42:35,147 copying soursop/data/test_data/ctl9_AA_reference.pkl -> build/lib/soursop/data/test_data 2026-06-28T18:42:35,190 copying soursop/data/test_data/gs6_AA.dcd -> build/lib/soursop/data/test_data 2026-06-28T18:42:35,193 copying soursop/data/test_data/gs6_AA.pdb -> build/lib/soursop/data/test_data 2026-06-28T18:42:35,196 copying soursop/data/test_data/gs6_AA.xtc -> build/lib/soursop/data/test_data 2026-06-28T18:42:35,198 copying soursop/data/test_data/gs6_AA_reference.pkl -> build/lib/soursop/data/test_data 2026-06-28T18:42:35,202 copying soursop/data/test_data/gs6_distance_map_mean.npy -> build/lib/soursop/data/test_data 2026-06-28T18:42:35,204 copying soursop/data/test_data/gs6_distance_map_std.npy -> build/lib/soursop/data/test_data 2026-06-28T18:42:35,207 copying soursop/data/test_data/gs6_invalid_r1.pdb -> build/lib/soursop/data/test_data 2026-06-28T18:42:35,209 copying soursop/data/test_data/ntl9_AA.pdb -> build/lib/soursop/data/test_data 2026-06-28T18:42:35,214 copying soursop/data/test_data/ntl9_AA.xtc -> build/lib/soursop/data/test_data 2026-06-28T18:42:35,217 copying soursop/data/test_data/ntl9_AA_reference.pkl -> build/lib/soursop/data/test_data 2026-06-28T18:42:35,240 copying soursop/data/test_data/ntl9_distance_map_mean.npy -> build/lib/soursop/data/test_data 2026-06-28T18:42:35,243 copying soursop/data/test_data/ntl9_distance_map_std.npy -> build/lib/soursop/data/test_data 2026-06-28T18:42:35,246 copying soursop/data/test_data/sigA_CG.pdb -> build/lib/soursop/data/test_data 2026-06-28T18:42:35,249 copying soursop/data/test_data/sigA_CG.xtc -> build/lib/soursop/data/test_data 2026-06-28T18:42:35,253 copying soursop/data/test_data/sigA_CG_reference.pkl -> build/lib/soursop/data/test_data 2026-06-28T18:42:35,354 copying soursop/data/test_data/synth_1_CG.pdb -> build/lib/soursop/data/test_data 2026-06-28T18:42:35,356 copying soursop/data/test_data/synth_1_CG.xtc -> build/lib/soursop/data/test_data 2026-06-28T18:42:35,360 copying soursop/data/test_data/synth_1_CG_reference.pkl -> build/lib/soursop/data/test_data 2026-06-28T18:42:35,386 creating build/lib/soursop/data/test_data/gromacs1chain 2026-06-28T18:42:35,387 copying soursop/data/test_data/gromacs1chain/top.pdb -> build/lib/soursop/data/test_data/gromacs1chain 2026-06-28T18:42:35,391 copying soursop/data/test_data/gromacs1chain/traj.xtc -> build/lib/soursop/data/test_data/gromacs1chain 2026-06-28T18:42:35,395 creating build/lib/soursop/data/test_data/gromacs2chains 2026-06-28T18:42:35,396 copying soursop/data/test_data/gromacs2chains/top.pdb -> build/lib/soursop/data/test_data/gromacs2chains 2026-06-28T18:42:35,400 copying soursop/data/test_data/gromacs2chains/traj.xtc -> build/lib/soursop/data/test_data/gromacs2chains 2026-06-28T18:42:35,404 creating build/lib/soursop/data/test_data/swan_trajectories 2026-06-28T18:42:35,405 copying soursop/data/test_data/swan_trajectories/Ash1.pdb -> build/lib/soursop/data/test_data/swan_trajectories 2026-06-28T18:42:35,408 copying soursop/data/test_data/swan_trajectories/Ash1.xtc -> build/lib/soursop/data/test_data/swan_trajectories 2026-06-28T18:42:35,417 copying soursop/data/test_data/swan_trajectories/alpha_syn.pdb -> build/lib/soursop/data/test_data/swan_trajectories 2026-06-28T18:42:35,420 copying soursop/data/test_data/swan_trajectories/alpha_syn.xtc -> build/lib/soursop/data/test_data/swan_trajectories 2026-06-28T18:42:35,431 copying soursop/data/test_data/swan_trajectories/helix.pdb -> build/lib/soursop/data/test_data/swan_trajectories 2026-06-28T18:42:35,434 copying soursop/data/test_data/swan_trajectories/helix.xtc -> build/lib/soursop/data/test_data/swan_trajectories 2026-06-28T18:42:35,440 creating build/lib/soursop/data/test_data/pre_data 2026-06-28T18:42:35,441 copying soursop/data/test_data/pre_data/PRE_109_unweighted.csv -> build/lib/soursop/data/test_data/pre_data 2026-06-28T18:42:35,443 copying soursop/data/test_data/pre_data/PRE_119_unweighted.csv -> build/lib/soursop/data/test_data/pre_data 2026-06-28T18:42:35,446 copying soursop/data/test_data/pre_data/PRE_149_unweighted.csv -> build/lib/soursop/data/test_data/pre_data 2026-06-28T18:42:35,448 copying soursop/data/test_data/pre_data/PRE_61_unweighted.csv -> build/lib/soursop/data/test_data/pre_data 2026-06-28T18:42:35,450 copying soursop/data/test_data/pre_data/PRE_74_unweighted.csv -> build/lib/soursop/data/test_data/pre_data 2026-06-28T18:42:35,452 copying soursop/data/test_data/pre_data/PRE_96_unweighted.csv -> build/lib/soursop/data/test_data/pre_data 2026-06-28T18:42:35,454 creating build/lib/soursop/data/test_data/cap_tests 2026-06-28T18:42:35,455 copying soursop/data/test_data/cap_tests/ACD_start_1.pdb -> build/lib/soursop/data/test_data/cap_tests 2026-06-28T18:42:35,458 copying soursop/data/test_data/cap_tests/ACD_start_10.pdb -> build/lib/soursop/data/test_data/cap_tests 2026-06-28T18:42:35,460 copying soursop/data/test_data/cap_tests/ACE_NH2.pdb -> build/lib/soursop/data/test_data/cap_tests 2026-06-28T18:42:35,462 copying soursop/data/test_data/cap_tests/ACE_NME.pdb -> build/lib/soursop/data/test_data/cap_tests 2026-06-28T18:42:35,465 copying soursop/data/test_data/cap_tests/ACE_NME_multichain.pdb -> build/lib/soursop/data/test_data/cap_tests 2026-06-28T18:42:35,468 copying soursop/data/test_data/cap_tests/ACE_NME_start_at_5.pdb -> build/lib/soursop/data/test_data/cap_tests 2026-06-28T18:42:35,470 copying soursop/data/test_data/cap_tests/ACE_UCAP.pdb -> build/lib/soursop/data/test_data/cap_tests 2026-06-28T18:42:35,473 copying soursop/data/test_data/cap_tests/FOR_NH2.pdb -> build/lib/soursop/data/test_data/cap_tests 2026-06-28T18:42:35,475 copying soursop/data/test_data/cap_tests/FOR_NME.pdb -> build/lib/soursop/data/test_data/cap_tests 2026-06-28T18:42:35,478 copying soursop/data/test_data/cap_tests/FOR_UCAP.pdb -> build/lib/soursop/data/test_data/cap_tests 2026-06-28T18:42:35,481 copying soursop/data/test_data/cap_tests/UCAP_NH2.pdb -> build/lib/soursop/data/test_data/cap_tests 2026-06-28T18:42:35,484 copying soursop/data/test_data/cap_tests/UCAP_NME.pdb -> build/lib/soursop/data/test_data/cap_tests 2026-06-28T18:42:35,486 copying soursop/data/test_data/cap_tests/UCAP_UCAP.pdb -> build/lib/soursop/data/test_data/cap_tests 2026-06-28T18:42:35,489 copying soursop/data/test_data/cap_tests/__START.pdb -> build/lib/soursop/data/test_data/cap_tests 2026-06-28T18:42:35,491 creating build/lib/soursop/data/test_data/sampling_quality/WT/1 2026-06-28T18:42:35,493 copying soursop/data/test_data/sampling_quality/WT/1/__START.pdb -> build/lib/soursop/data/test_data/sampling_quality/WT/1 2026-06-28T18:42:35,496 copying soursop/data/test_data/sampling_quality/WT/1/__traj.xtc -> build/lib/soursop/data/test_data/sampling_quality/WT/1 2026-06-28T18:42:35,500 creating build/lib/soursop/data/test_data/sampling_quality/WT/3 2026-06-28T18:42:35,501 copying soursop/data/test_data/sampling_quality/WT/3/__START.pdb -> build/lib/soursop/data/test_data/sampling_quality/WT/3 2026-06-28T18:42:35,504 copying soursop/data/test_data/sampling_quality/WT/3/__traj.xtc -> build/lib/soursop/data/test_data/sampling_quality/WT/3 2026-06-28T18:42:35,509 creating build/lib/soursop/data/test_data/sampling_quality/WT/2 2026-06-28T18:42:35,510 copying soursop/data/test_data/sampling_quality/WT/2/__START.pdb -> build/lib/soursop/data/test_data/sampling_quality/WT/2 2026-06-28T18:42:35,512 copying soursop/data/test_data/sampling_quality/WT/2/__traj.xtc -> build/lib/soursop/data/test_data/sampling_quality/WT/2 2026-06-28T18:42:35,517 creating build/lib/soursop/data/test_data/sampling_quality/EV/1 2026-06-28T18:42:35,518 copying soursop/data/test_data/sampling_quality/EV/1/__START.pdb -> build/lib/soursop/data/test_data/sampling_quality/EV/1 2026-06-28T18:42:35,521 copying soursop/data/test_data/sampling_quality/EV/1/__traj.xtc -> build/lib/soursop/data/test_data/sampling_quality/EV/1 2026-06-28T18:42:35,525 creating build/lib/soursop/data/test_data/sampling_quality/EV/3 2026-06-28T18:42:35,527 copying soursop/data/test_data/sampling_quality/EV/3/__START.pdb -> build/lib/soursop/data/test_data/sampling_quality/EV/3 2026-06-28T18:42:35,529 copying soursop/data/test_data/sampling_quality/EV/3/__traj.xtc -> build/lib/soursop/data/test_data/sampling_quality/EV/3 2026-06-28T18:42:35,534 creating build/lib/soursop/data/test_data/sampling_quality/EV/2 2026-06-28T18:42:35,536 copying soursop/data/test_data/sampling_quality/EV/2/__START.pdb -> build/lib/soursop/data/test_data/sampling_quality/EV/2 2026-06-28T18:42:35,539 copying soursop/data/test_data/sampling_quality/EV/2/__traj.xtc -> build/lib/soursop/data/test_data/sampling_quality/EV/2 2026-06-28T18:42:35,562 installing to build/bdist.linux-armv7l/wheel 2026-06-28T18:42:35,563 running install 2026-06-28T18:42:35,585 running install_lib 2026-06-28T18:42:35,593 creating build/bdist.linux-armv7l/wheel 2026-06-28T18:42:35,595 creating build/bdist.linux-armv7l/wheel/soursop 2026-06-28T18:42:35,597 copying build/lib/soursop/sssampling.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-06-28T18:42:35,603 copying build/lib/soursop/_version.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-06-28T18:42:35,608 copying build/lib/soursop/ssnmr.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-06-28T18:42:35,614 copying build/lib/soursop/sstools.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-06-28T18:42:35,618 creating build/bdist.linux-armv7l/wheel/soursop/data 2026-06-28T18:42:35,620 copying build/lib/soursop/data/phi_excluded_volume_tripeptides.pickle -> build/bdist.linux-armv7l/wheel/./soursop/data 2026-06-28T18:42:35,693 copying build/lib/soursop/data/psi_excluded_volume_tripeptides.pickle -> build/bdist.linux-armv7l/wheel/./soursop/data 2026-06-28T18:42:35,728 copying build/lib/soursop/data/bbseg2.dat -> build/bdist.linux-armv7l/wheel/./soursop/data 2026-06-28T18:42:35,730 copying build/lib/soursop/data/SASA_SUMMARY.csv -> build/bdist.linux-armv7l/wheel/./soursop/data 2026-06-28T18:42:35,734 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data 2026-06-28T18:42:35,736 copying build/lib/soursop/data/test_data/synth_1_CG.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-06-28T18:42:35,739 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data/gromacs1chain 2026-06-28T18:42:35,740 copying build/lib/soursop/data/test_data/gromacs1chain/top.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/gromacs1chain 2026-06-28T18:42:35,744 copying build/lib/soursop/data/test_data/gromacs1chain/traj.xtc -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/gromacs1chain 2026-06-28T18:42:35,749 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data/gromacs2chains 2026-06-28T18:42:35,750 copying build/lib/soursop/data/test_data/gromacs2chains/top.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/gromacs2chains 2026-06-28T18:42:35,754 copying build/lib/soursop/data/test_data/gromacs2chains/traj.xtc -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/gromacs2chains 2026-06-28T18:42:35,759 copying build/lib/soursop/data/test_data/gs6_distance_map_std.npy -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-06-28T18:42:35,761 copying build/lib/soursop/data/test_data/ntl9_AA.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-06-28T18:42:35,765 copying build/lib/soursop/data/test_data/ctl9_AA.xtc -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-06-28T18:42:35,879 copying build/lib/soursop/data/test_data/ctl9_AA_reference.pkl -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-06-28T18:42:35,956 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data/sampling_quality 2026-06-28T18:42:35,959 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data/sampling_quality/WT 2026-06-28T18:42:35,961 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data/sampling_quality/WT/1 2026-06-28T18:42:35,963 copying build/lib/soursop/data/test_data/sampling_quality/WT/1/__traj.xtc -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/sampling_quality/WT/1 2026-06-28T18:42:35,976 copying build/lib/soursop/data/test_data/sampling_quality/WT/1/__START.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/sampling_quality/WT/1 2026-06-28T18:42:35,978 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data/sampling_quality/WT/3 2026-06-28T18:42:35,979 copying build/lib/soursop/data/test_data/sampling_quality/WT/3/__traj.xtc -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/sampling_quality/WT/3 2026-06-28T18:42:35,983 copying build/lib/soursop/data/test_data/sampling_quality/WT/3/__START.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/sampling_quality/WT/3 2026-06-28T18:42:35,986 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data/sampling_quality/WT/2 2026-06-28T18:42:35,987 copying build/lib/soursop/data/test_data/sampling_quality/WT/2/__traj.xtc -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/sampling_quality/WT/2 2026-06-28T18:42:35,991 copying build/lib/soursop/data/test_data/sampling_quality/WT/2/__START.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/sampling_quality/WT/2 2026-06-28T18:42:35,994 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data/sampling_quality/EV 2026-06-28T18:42:35,996 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data/sampling_quality/EV/1 2026-06-28T18:42:35,997 copying build/lib/soursop/data/test_data/sampling_quality/EV/1/__traj.xtc -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/sampling_quality/EV/1 2026-06-28T18:42:36,001 copying build/lib/soursop/data/test_data/sampling_quality/EV/1/__START.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/sampling_quality/EV/1 2026-06-28T18:42:36,003 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data/sampling_quality/EV/3 2026-06-28T18:42:36,004 copying build/lib/soursop/data/test_data/sampling_quality/EV/3/__traj.xtc -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/sampling_quality/EV/3 2026-06-28T18:42:36,008 copying build/lib/soursop/data/test_data/sampling_quality/EV/3/__START.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/sampling_quality/EV/3 2026-06-28T18:42:36,011 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data/sampling_quality/EV/2 2026-06-28T18:42:36,012 copying build/lib/soursop/data/test_data/sampling_quality/EV/2/__traj.xtc -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/sampling_quality/EV/2 2026-06-28T18:42:36,016 copying build/lib/soursop/data/test_data/sampling_quality/EV/2/__START.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/sampling_quality/EV/2 2026-06-28T18:42:36,018 copying build/lib/soursop/data/test_data/gs6_AA.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-06-28T18:42:36,020 copying build/lib/soursop/data/test_data/gs6_invalid_r1.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-06-28T18:42:36,022 copying build/lib/soursop/data/test_data/sigA_CG.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-06-28T18:42:36,025 copying build/lib/soursop/data/test_data/gs6_AA_reference.pkl -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-06-28T18:42:36,027 copying build/lib/soursop/data/test_data/gs6_AA.dcd -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-06-28T18:42:36,030 copying build/lib/soursop/data/test_data/all_residues_AA.xtc -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-06-28T18:42:36,032 copying build/lib/soursop/data/test_data/sigA_CG.xtc -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-06-28T18:42:36,036 copying build/lib/soursop/data/test_data/gs6_AA.xtc -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-06-28T18:42:36,038 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data/swan_trajectories 2026-06-28T18:42:36,039 copying build/lib/soursop/data/test_data/swan_trajectories/alpha_syn.xtc -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/swan_trajectories 2026-06-28T18:42:36,050 copying build/lib/soursop/data/test_data/swan_trajectories/helix.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/swan_trajectories 2026-06-28T18:42:36,052 copying build/lib/soursop/data/test_data/swan_trajectories/alpha_syn.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/swan_trajectories 2026-06-28T18:42:36,055 copying build/lib/soursop/data/test_data/swan_trajectories/helix.xtc -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/swan_trajectories 2026-06-28T18:42:36,061 copying build/lib/soursop/data/test_data/swan_trajectories/Ash1.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/swan_trajectories 2026-06-28T18:42:36,064 copying build/lib/soursop/data/test_data/swan_trajectories/Ash1.xtc -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/swan_trajectories 2026-06-28T18:42:36,071 copying build/lib/soursop/data/test_data/ctl9_AA.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-06-28T18:42:36,076 copying build/lib/soursop/data/test_data/ntl9_AA.xtc -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-06-28T18:42:36,078 copying build/lib/soursop/data/test_data/ntl9_distance_map_mean.npy -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-06-28T18:42:36,081 copying build/lib/soursop/data/test_data/ntl9_distance_map_std.npy -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-06-28T18:42:36,084 copying build/lib/soursop/data/test_data/all_residues_AA.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-06-28T18:42:36,086 copying build/lib/soursop/data/test_data/sigA_CG_reference.pkl -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-06-28T18:42:36,189 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data/pre_data 2026-06-28T18:42:36,190 copying build/lib/soursop/data/test_data/pre_data/PRE_119_unweighted.csv -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/pre_data 2026-06-28T18:42:36,192 copying build/lib/soursop/data/test_data/pre_data/PRE_61_unweighted.csv -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/pre_data 2026-06-28T18:42:36,194 copying build/lib/soursop/data/test_data/pre_data/PRE_109_unweighted.csv -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/pre_data 2026-06-28T18:42:36,196 copying build/lib/soursop/data/test_data/pre_data/PRE_96_unweighted.csv -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/pre_data 2026-06-28T18:42:36,198 copying build/lib/soursop/data/test_data/pre_data/PRE_149_unweighted.csv -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/pre_data 2026-06-28T18:42:36,200 copying build/lib/soursop/data/test_data/pre_data/PRE_74_unweighted.csv -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/pre_data 2026-06-28T18:42:36,202 copying build/lib/soursop/data/test_data/synth_1_CG.xtc -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-06-28T18:42:36,205 copying build/lib/soursop/data/test_data/gs6_distance_map_mean.npy -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-06-28T18:42:36,207 copying build/lib/soursop/data/test_data/synth_1_CG_reference.pkl -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-06-28T18:42:36,238 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data/cap_tests 2026-06-28T18:42:36,239 copying build/lib/soursop/data/test_data/cap_tests/ACE_NME.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/cap_tests 2026-06-28T18:42:36,241 copying build/lib/soursop/data/test_data/cap_tests/UCAP_NH2.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/cap_tests 2026-06-28T18:42:36,244 copying build/lib/soursop/data/test_data/cap_tests/ACE_UCAP.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/cap_tests 2026-06-28T18:42:36,246 copying build/lib/soursop/data/test_data/cap_tests/ACD_start_10.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/cap_tests 2026-06-28T18:42:36,248 copying build/lib/soursop/data/test_data/cap_tests/ACD_start_1.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/cap_tests 2026-06-28T18:42:36,250 copying build/lib/soursop/data/test_data/cap_tests/FOR_NH2.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/cap_tests 2026-06-28T18:42:36,252 copying build/lib/soursop/data/test_data/cap_tests/FOR_NME.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/cap_tests 2026-06-28T18:42:36,254 copying build/lib/soursop/data/test_data/cap_tests/ACE_NME_start_at_5.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/cap_tests 2026-06-28T18:42:36,256 copying build/lib/soursop/data/test_data/cap_tests/ACE_NH2.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/cap_tests 2026-06-28T18:42:36,259 copying build/lib/soursop/data/test_data/cap_tests/FOR_UCAP.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/cap_tests 2026-06-28T18:42:36,261 copying build/lib/soursop/data/test_data/cap_tests/UCAP_NME.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/cap_tests 2026-06-28T18:42:36,264 copying build/lib/soursop/data/test_data/cap_tests/ACE_NME_multichain.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/cap_tests 2026-06-28T18:42:36,266 copying build/lib/soursop/data/test_data/cap_tests/UCAP_UCAP.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/cap_tests 2026-06-28T18:42:36,268 copying build/lib/soursop/data/test_data/cap_tests/__START.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/cap_tests 2026-06-28T18:42:36,270 copying build/lib/soursop/data/test_data/ntl9_AA_reference.pkl -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-06-28T18:42:36,292 copying build/lib/soursop/sscoper.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-06-28T18:42:36,295 creating build/bdist.linux-armv7l/wheel/soursop/plugins 2026-06-28T18:42:36,296 copying build/lib/soursop/plugins/__init__.py -> build/bdist.linux-armv7l/wheel/./soursop/plugins 2026-06-28T18:42:36,298 creating build/bdist.linux-armv7l/wheel/soursop/plugins/sparrow_plugin 2026-06-28T18:42:36,299 copying build/lib/soursop/plugins/sparrow_plugin/__init__.py -> build/bdist.linux-armv7l/wheel/./soursop/plugins/sparrow_plugin 2026-06-28T18:42:36,302 creating build/bdist.linux-armv7l/wheel/soursop/tests 2026-06-28T18:42:36,303 copying build/lib/soursop/tests/test_scratchpad.ipynb -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-06-28T18:42:36,308 copying build/lib/soursop/tests/test_ssnmr.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-06-28T18:42:36,310 copying build/lib/soursop/tests/test_ssbme.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-06-28T18:42:36,313 copying build/lib/soursop/tests/test_sspre.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-06-28T18:42:36,315 copying build/lib/soursop/tests/test_ssproteins.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-06-28T18:42:36,319 copying build/lib/soursop/tests/test_reference_observables.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-06-28T18:42:36,321 copying build/lib/soursop/tests/test_ssutils.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-06-28T18:42:36,324 copying build/lib/soursop/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-06-28T18:42:36,326 copying build/lib/soursop/tests/test_sstrajectory.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-06-28T18:42:36,330 copying build/lib/soursop/tests/test_sssampling.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-06-28T18:42:36,332 copying build/lib/soursop/tests/conftest.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-06-28T18:42:36,335 copying build/lib/soursop/tests/test_ssmutual_information.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-06-28T18:42:36,337 copying build/lib/soursop/tests/test_ssnmr_extended.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-06-28T18:42:36,340 copying build/lib/soursop/tests/test_sshdx.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-06-28T18:42:36,342 copying build/lib/soursop/tests/test_sscoper.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-06-28T18:42:36,345 copying build/lib/soursop/tests/test_caps.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-06-28T18:42:36,347 copying build/lib/soursop/tests/test_swan.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-06-28T18:42:36,350 copying build/lib/soursop/tests/test_soursop.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-06-28T18:42:36,353 creating build/bdist.linux-armv7l/wheel/soursop/tests/build_reference 2026-06-28T18:42:36,354 copying build/lib/soursop/tests/build_reference/__init__.py -> build/bdist.linux-armv7l/wheel/./soursop/tests/build_reference 2026-06-28T18:42:36,356 copying build/lib/soursop/tests/build_reference/build_references.py -> build/bdist.linux-armv7l/wheel/./soursop/tests/build_reference 2026-06-28T18:42:36,359 copying build/lib/soursop/tests/test_weights.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-06-28T18:42:36,363 copying build/lib/soursop/ssdata.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-06-28T18:42:36,365 copying build/lib/soursop/__init__.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-06-28T18:42:36,367 copying build/lib/soursop/configs.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-06-28T18:42:36,370 copying build/lib/soursop/ssio.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-06-28T18:42:36,372 copying build/lib/soursop/ssmutualinformation.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-06-28T18:42:36,375 copying build/lib/soursop/sstrajectory.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-06-28T18:42:36,379 copying build/lib/soursop/soursop.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-06-28T18:42:36,381 copying build/lib/soursop/ssprotein.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-06-28T18:42:36,390 copying build/lib/soursop/ssutils.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-06-28T18:42:36,394 copying build/lib/soursop/ssbme.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-06-28T18:42:36,398 copying build/lib/soursop/_internal_data.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-06-28T18:42:36,402 copying build/lib/soursop/sspolymer.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-06-28T18:42:36,405 copying build/lib/soursop/ssexceptions.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-06-28T18:42:36,408 copying build/lib/soursop/sspre.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-06-28T18:42:36,411 copying build/lib/soursop/sshdx.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-06-28T18:42:36,414 running install_egg_info 2026-06-28T18:42:36,423 Copying SOURSOP.egg-info to build/bdist.linux-armv7l/wheel/./SOURSOP-2.0.1-py3.11.egg-info 2026-06-28T18:42:36,439 running install_scripts 2026-06-28T18:42:36,452 creating build/bdist.linux-armv7l/wheel/soursop-2.0.1.dist-info/WHEEL 2026-06-28T18:42:36,457 creating '/tmp/pip-wheel-fkw6gdn9/.tmp-pigb1cdk/soursop-2.0.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-06-28T18:42:36,461 adding 'soursop/__init__.py' 2026-06-28T18:42:36,463 adding 'soursop/_internal_data.py' 2026-06-28T18:42:36,465 adding 'soursop/_version.py' 2026-06-28T18:42:36,467 adding 'soursop/configs.py' 2026-06-28T18:42:36,469 adding 'soursop/soursop.py' 2026-06-28T18:42:36,481 adding 'soursop/ssbme.py' 2026-06-28T18:42:36,492 adding 'soursop/sscoper.py' 2026-06-28T18:42:36,495 adding 'soursop/ssdata.py' 2026-06-28T18:42:36,497 adding 'soursop/ssexceptions.py' 2026-06-28T18:42:36,500 adding 'soursop/sshdx.py' 2026-06-28T18:42:36,502 adding 'soursop/ssio.py' 2026-06-28T18:42:36,504 adding 'soursop/ssmutualinformation.py' 2026-06-28T18:42:36,512 adding 'soursop/ssnmr.py' 2026-06-28T18:42:36,515 adding 'soursop/sspolymer.py' 2026-06-28T18:42:36,517 adding 'soursop/sspre.py' 2026-06-28T18:42:36,549 adding 'soursop/ssprotein.py' 2026-06-28T18:42:36,558 adding 'soursop/sssampling.py' 2026-06-28T18:42:36,561 adding 'soursop/sstools.py' 2026-06-28T18:42:36,568 adding 'soursop/sstrajectory.py' 2026-06-28T18:42:36,573 adding 'soursop/ssutils.py' 2026-06-28T18:42:36,575 adding 'soursop/data/SASA_SUMMARY.csv' 2026-06-28T18:42:36,576 adding 'soursop/data/bbseg2.dat' 2026-06-28T18:42:36,748 adding 'soursop/data/phi_excluded_volume_tripeptides.pickle' 2026-06-28T18:42:36,920 adding 'soursop/data/psi_excluded_volume_tripeptides.pickle' 2026-06-28T18:42:36,933 adding 'soursop/data/test_data/all_residues_AA.pdb' 2026-06-28T18:42:36,935 adding 'soursop/data/test_data/all_residues_AA.xtc' 2026-06-28T18:42:36,953 adding 'soursop/data/test_data/ctl9_AA.pdb' 2026-06-28T18:42:37,617 adding 'soursop/data/test_data/ctl9_AA.xtc' 2026-06-28T18:42:37,855 adding 'soursop/data/test_data/ctl9_AA_reference.pkl' 2026-06-28T18:42:37,879 adding 'soursop/data/test_data/gs6_AA.dcd' 2026-06-28T18:42:37,881 adding 'soursop/data/test_data/gs6_AA.pdb' 2026-06-28T18:42:37,883 adding 'soursop/data/test_data/gs6_AA.xtc' 2026-06-28T18:42:37,887 adding 'soursop/data/test_data/gs6_AA_reference.pkl' 2026-06-28T18:42:37,888 adding 'soursop/data/test_data/gs6_distance_map_mean.npy' 2026-06-28T18:42:37,890 adding 'soursop/data/test_data/gs6_distance_map_std.npy' 2026-06-28T18:42:37,892 adding 'soursop/data/test_data/gs6_invalid_r1.pdb' 2026-06-28T18:42:37,903 adding 'soursop/data/test_data/ntl9_AA.pdb' 2026-06-28T18:42:37,908 adding 'soursop/data/test_data/ntl9_AA.xtc' 2026-06-28T18:42:37,973 adding 'soursop/data/test_data/ntl9_AA_reference.pkl' 2026-06-28T18:42:37,988 adding 'soursop/data/test_data/ntl9_distance_map_mean.npy' 2026-06-28T18:42:37,992 adding 'soursop/data/test_data/ntl9_distance_map_std.npy' 2026-06-28T18:42:37,996 adding 'soursop/data/test_data/sigA_CG.pdb' 2026-06-28T18:42:38,007 adding 'soursop/data/test_data/sigA_CG.xtc' 2026-06-28T18:42:38,477 adding 'soursop/data/test_data/sigA_CG_reference.pkl' 2026-06-28T18:42:38,534 adding 'soursop/data/test_data/synth_1_CG.pdb' 2026-06-28T18:42:38,540 adding 'soursop/data/test_data/synth_1_CG.xtc' 2026-06-28T18:42:38,634 adding 'soursop/data/test_data/synth_1_CG_reference.pkl' 2026-06-28T18:42:38,650 adding 'soursop/data/test_data/cap_tests/ACD_start_1.pdb' 2026-06-28T18:42:38,651 adding 'soursop/data/test_data/cap_tests/ACD_start_10.pdb' 2026-06-28T18:42:38,653 adding 'soursop/data/test_data/cap_tests/ACE_NH2.pdb' 2026-06-28T18:42:38,655 adding 'soursop/data/test_data/cap_tests/ACE_NME.pdb' 2026-06-28T18:42:38,658 adding 'soursop/data/test_data/cap_tests/ACE_NME_multichain.pdb' 2026-06-28T18:42:38,660 adding 'soursop/data/test_data/cap_tests/ACE_NME_start_at_5.pdb' 2026-06-28T18:42:38,662 adding 'soursop/data/test_data/cap_tests/ACE_UCAP.pdb' 2026-06-28T18:42:38,664 adding 'soursop/data/test_data/cap_tests/FOR_NH2.pdb' 2026-06-28T18:42:38,666 adding 'soursop/data/test_data/cap_tests/FOR_NME.pdb' 2026-06-28T18:42:38,668 adding 'soursop/data/test_data/cap_tests/FOR_UCAP.pdb' 2026-06-28T18:42:38,669 adding 'soursop/data/test_data/cap_tests/UCAP_NH2.pdb' 2026-06-28T18:42:38,671 adding 'soursop/data/test_data/cap_tests/UCAP_NME.pdb' 2026-06-28T18:42:38,673 adding 'soursop/data/test_data/cap_tests/UCAP_UCAP.pdb' 2026-06-28T18:42:38,675 adding 'soursop/data/test_data/cap_tests/__START.pdb' 2026-06-28T18:42:38,686 adding 'soursop/data/test_data/gromacs1chain/top.pdb' 2026-06-28T18:42:38,696 adding 'soursop/data/test_data/gromacs1chain/traj.xtc' 2026-06-28T18:42:38,709 adding 'soursop/data/test_data/gromacs2chains/top.pdb' 2026-06-28T18:42:38,719 adding 'soursop/data/test_data/gromacs2chains/traj.xtc' 2026-06-28T18:42:38,722 adding 'soursop/data/test_data/pre_data/PRE_109_unweighted.csv' 2026-06-28T18:42:38,723 adding 'soursop/data/test_data/pre_data/PRE_119_unweighted.csv' 2026-06-28T18:42:38,725 adding 'soursop/data/test_data/pre_data/PRE_149_unweighted.csv' 2026-06-28T18:42:38,727 adding 'soursop/data/test_data/pre_data/PRE_61_unweighted.csv' 2026-06-28T18:42:38,728 adding 'soursop/data/test_data/pre_data/PRE_74_unweighted.csv' 2026-06-28T18:42:38,730 adding 'soursop/data/test_data/pre_data/PRE_96_unweighted.csv' 2026-06-28T18:42:38,733 adding 'soursop/data/test_data/sampling_quality/EV/1/__START.pdb' 2026-06-28T18:42:38,749 adding 'soursop/data/test_data/sampling_quality/EV/1/__traj.xtc' 2026-06-28T18:42:38,753 adding 'soursop/data/test_data/sampling_quality/EV/2/__START.pdb' 2026-06-28T18:42:38,769 adding 'soursop/data/test_data/sampling_quality/EV/2/__traj.xtc' 2026-06-28T18:42:38,772 adding 'soursop/data/test_data/sampling_quality/EV/3/__START.pdb' 2026-06-28T18:42:38,788 adding 'soursop/data/test_data/sampling_quality/EV/3/__traj.xtc' 2026-06-28T18:42:38,792 adding 'soursop/data/test_data/sampling_quality/WT/1/__START.pdb' 2026-06-28T18:42:38,808 adding 'soursop/data/test_data/sampling_quality/WT/1/__traj.xtc' 2026-06-28T18:42:38,811 adding 'soursop/data/test_data/sampling_quality/WT/2/__START.pdb' 2026-06-28T18:42:38,827 adding 'soursop/data/test_data/sampling_quality/WT/2/__traj.xtc' 2026-06-28T18:42:38,830 adding 'soursop/data/test_data/sampling_quality/WT/3/__START.pdb' 2026-06-28T18:42:38,846 adding 'soursop/data/test_data/sampling_quality/WT/3/__traj.xtc' 2026-06-28T18:42:38,851 adding 'soursop/data/test_data/swan_trajectories/Ash1.pdb' 2026-06-28T18:42:38,895 adding 'soursop/data/test_data/swan_trajectories/Ash1.xtc' 2026-06-28T18:42:38,903 adding 'soursop/data/test_data/swan_trajectories/alpha_syn.pdb' 2026-06-28T18:42:38,970 adding 'soursop/data/test_data/swan_trajectories/alpha_syn.xtc' 2026-06-28T18:42:38,977 adding 'soursop/data/test_data/swan_trajectories/helix.pdb' 2026-06-28T18:42:39,012 adding 'soursop/data/test_data/swan_trajectories/helix.xtc' 2026-06-28T18:42:39,016 adding 'soursop/plugins/__init__.py' 2026-06-28T18:42:39,018 adding 'soursop/plugins/sparrow_plugin/__init__.py' 2026-06-28T18:42:39,021 adding 'soursop/tests/__init__.py' 2026-06-28T18:42:39,023 adding 'soursop/tests/conftest.py' 2026-06-28T18:42:39,024 adding 'soursop/tests/test_caps.py' 2026-06-28T18:42:39,027 adding 'soursop/tests/test_reference_observables.py' 2026-06-28T18:42:39,042 adding 'soursop/tests/test_scratchpad.ipynb' 2026-06-28T18:42:39,045 adding 'soursop/tests/test_soursop.py' 2026-06-28T18:42:39,047 adding 'soursop/tests/test_ssbme.py' 2026-06-28T18:42:39,050 adding 'soursop/tests/test_sscoper.py' 2026-06-28T18:42:39,052 adding 'soursop/tests/test_sshdx.py' 2026-06-28T18:42:39,053 adding 'soursop/tests/test_ssmutual_information.py' 2026-06-28T18:42:39,056 adding 'soursop/tests/test_ssnmr.py' 2026-06-28T18:42:39,058 adding 'soursop/tests/test_ssnmr_extended.py' 2026-06-28T18:42:39,060 adding 'soursop/tests/test_sspre.py' 2026-06-28T18:42:39,064 adding 'soursop/tests/test_ssproteins.py' 2026-06-28T18:42:39,066 adding 'soursop/tests/test_sssampling.py' 2026-06-28T18:42:39,070 adding 'soursop/tests/test_sstrajectory.py' 2026-06-28T18:42:39,071 adding 'soursop/tests/test_ssutils.py' 2026-06-28T18:42:39,073 adding 'soursop/tests/test_swan.py' 2026-06-28T18:42:39,076 adding 'soursop/tests/test_weights.py' 2026-06-28T18:42:39,078 adding 'soursop/tests/build_reference/__init__.py' 2026-06-28T18:42:39,082 adding 'soursop/tests/build_reference/build_references.py' 2026-06-28T18:42:39,085 adding 'soursop-2.0.1.dist-info/licenses/LICENSE' 2026-06-28T18:42:39,087 adding 'soursop-2.0.1.dist-info/METADATA' 2026-06-28T18:42:39,088 adding 'soursop-2.0.1.dist-info/WHEEL' 2026-06-28T18:42:39,089 adding 'soursop-2.0.1.dist-info/top_level.txt' 2026-06-28T18:42:39,091 adding 'soursop-2.0.1.dist-info/RECORD' 2026-06-28T18:42:39,213 removing build/bdist.linux-armv7l/wheel 2026-06-28T18:42:39,353 Building wheel for soursop (pyproject.toml): finished with status 'done' 2026-06-28T18:42:39,644 Created wheel for soursop: filename=soursop-2.0.1-py3-none-any.whl size=12255943 sha256=21310861d4622ca1586b004bf8ff4f36e50026163698d276b793b04527dcbd08 2026-06-28T18:42:39,646 Stored in directory: /tmp/pip-ephem-wheel-cache-m7icvi1r/wheels/13/15/23/e28222bd9a4477283aa57788db49ea6e2e32c49bc096163399 2026-06-28T18:42:39,665 Successfully built soursop 2026-06-28T18:42:39,942 Removed build tracker: '/tmp/pip-build-tracker-6af7i3zl'