2026-07-06T08:49:37,846 Created temporary directory: /tmp/pip-ephem-wheel-cache-kjythjd7 2026-07-06T08:49:37,848 Created temporary directory: /tmp/pip-build-tracker-rvr281jp 2026-07-06T08:49:37,848 Initialized build tracking at /tmp/pip-build-tracker-rvr281jp 2026-07-06T08:49:37,849 Created build tracker: /tmp/pip-build-tracker-rvr281jp 2026-07-06T08:49:37,849 Entered build tracker: /tmp/pip-build-tracker-rvr281jp 2026-07-06T08:49:37,850 Created temporary directory: /tmp/pip-wheel-sdlyag82 2026-07-06T08:49:37,853 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-07-06T08:49:37,855 Created temporary directory: /tmp/pip-ephem-wheel-cache-x_dvme1n 2026-07-06T08:49:37,880 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-07-06T08:49:37,884 2 location(s) to search for versions of soursop: 2026-07-06T08:49:37,884 * https://pypi.org/simple/soursop/ 2026-07-06T08:49:37,884 * https://www.piwheels.org/simple/soursop/ 2026-07-06T08:49:37,885 Fetching project page and analyzing links: https://pypi.org/simple/soursop/ 2026-07-06T08:49:37,886 Getting page https://pypi.org/simple/soursop/ 2026-07-06T08:49:37,887 Found index url https://pypi.org/simple 2026-07-06T08:49:38,116 Fetched page https://pypi.org/simple/soursop/ as application/vnd.pypi.simple.v1+json 2026-07-06T08:49:38,120 Found link https://files.pythonhosted.org/packages/9d/4f/ddf85b2a407fb41c9fd04f26f2e8761c1d31c43b42fc6828a8bf18145f89/soursop-0.1.6.tar.gz (from https://pypi.org/simple/soursop/), version: 0.1.6 2026-07-06T08:49:38,120 Found link https://files.pythonhosted.org/packages/d9/67/f6e2c070bdb22cb1bd094c33934099f9aab0a3ee0034b0893d238dedc0d4/soursop-0.1.9.tar.gz (from https://pypi.org/simple/soursop/), version: 0.1.9 2026-07-06T08:49:38,121 Found link https://files.pythonhosted.org/packages/d0/28/a4e1b5066e10ff76cbce5029c92c9ba6b0b85d97d8ffd548df453b40f251/soursop-0.1.9.2.tar.gz (from https://pypi.org/simple/soursop/), version: 0.1.9.2 2026-07-06T08:49:38,122 Found link https://files.pythonhosted.org/packages/06/82/f60f9e8d635865a8c5a901dcdf07b976757bae53999d55ee8ba779550c9b/soursop-0.2.1.tar.gz (from https://pypi.org/simple/soursop/), version: 0.2.1 2026-07-06T08:49:38,123 Found link https://files.pythonhosted.org/packages/fb/54/e5eea4c8b537346c5ef3fd71c1fbebc95808d69705c1889078fb9d03fae1/soursop-0.2.2.tar.gz (from https://pypi.org/simple/soursop/), version: 0.2.2 2026-07-06T08:49:38,123 Found link https://files.pythonhosted.org/packages/a5/28/bf3486fecbce619002890de298d0a5e11c10f6cfb2d6efced4046f1b45d1/soursop-0.2.3.tar.gz (from https://pypi.org/simple/soursop/), version: 0.2.3 2026-07-06T08:49:38,124 Found link https://files.pythonhosted.org/packages/46/7c/ed0d47073b28595abdca03340c287aee27521ff39bf1f7b9fb86f8fb58b0/soursop-0.2.4.tar.gz (from https://pypi.org/simple/soursop/), version: 0.2.4 2026-07-06T08:49:38,125 Found link https://files.pythonhosted.org/packages/e6/fa/65b818eb75b238b0c0ee787e7b96e0c87971966f94005eba7a70e6091b8a/soursop-0.2.6.tar.gz (from https://pypi.org/simple/soursop/) (requires-python:>=3.7), version: 0.2.6 2026-07-06T08:49:38,126 Found link https://files.pythonhosted.org/packages/58/df/c33e777ce361d71d3113401f96c5122f3ac82a368a06471eea8992a670b0/soursop-0.2.7.tar.gz (from https://pypi.org/simple/soursop/) (requires-python:>=3.7), version: 0.2.7 2026-07-06T08:49:38,127 Skipping link: No binaries permitted for soursop: https://files.pythonhosted.org/packages/88/85/66aa81a4c3a856428de8c309777d517616c71fc52eaa4684f202c4857602/soursop-2.0.0-py3-none-any.whl (from https://pypi.org/simple/soursop/) (requires-python:>=3.9) 2026-07-06T08:49:38,128 Found link https://files.pythonhosted.org/packages/7b/e9/db4cc7a15180bc2996607cd1f242dbc5db17b6011f8c23eee963c379815d/soursop-2.0.0.tar.gz (from https://pypi.org/simple/soursop/) (requires-python:>=3.9), version: 2.0.0 2026-07-06T08:49:38,129 Skipping link: No binaries permitted for soursop: https://files.pythonhosted.org/packages/36/bf/8aac7dcab235c03edce1d2896d3e31751648e9141d87b9deff742fe4c747/soursop-2.0.1-py3-none-any.whl (from https://pypi.org/simple/soursop/) (requires-python:>=3.9) 2026-07-06T08:49:38,130 Found link https://files.pythonhosted.org/packages/30/95/969d59dc2e485f2f7ec94fc7c700ab406b0901cc060c203be656e76b67a2/soursop-2.0.1.tar.gz (from https://pypi.org/simple/soursop/) (requires-python:>=3.9), version: 2.0.1 2026-07-06T08:49:38,130 Skipping link: No binaries permitted for soursop: https://files.pythonhosted.org/packages/b6/45/2ca8830228733e76513882ddad80dd1ed0cd25faebc3e0385211b8efda59/soursop-2.0.2-py3-none-any.whl (from https://pypi.org/simple/soursop/) (requires-python:>=3.9) 2026-07-06T08:49:38,131 Found link https://files.pythonhosted.org/packages/d3/d4/a11285683d7eda067f8a91c9371c5845b0b05c6889b7156ed0bd80c54fbc/soursop-2.0.2.tar.gz (from https://pypi.org/simple/soursop/) (requires-python:>=3.9), version: 2.0.2 2026-07-06T08:49:38,132 Fetching project page and analyzing links: https://www.piwheels.org/simple/soursop/ 2026-07-06T08:49:38,133 Getting page https://www.piwheels.org/simple/soursop/ 2026-07-06T08:49:38,134 Found index url https://www.piwheels.org/simple 2026-07-06T08:49:38,325 Fetched page https://www.piwheels.org/simple/soursop/ as text/html 2026-07-06T08:49:38,329 Skipping link: No binaries permitted for soursop: https://www.piwheels.org/simple/soursop/soursop-2.0.1-py3-none-any.whl#sha256=21310861d4622ca1586b004bf8ff4f36e50026163698d276b793b04527dcbd08 (from https://www.piwheels.org/simple/soursop/) (requires-python:>=3.9) 2026-07-06T08:49:38,330 Skipping link: No binaries permitted for soursop: https://www.piwheels.org/simple/soursop/soursop-2.0.0-py3-none-any.whl#sha256=e562be77127b251c89a8db2124be54122427a870b499d1736231d9b417b69d5a (from https://www.piwheels.org/simple/soursop/) (requires-python:>=3.9) 2026-07-06T08:49:38,330 Skipping link: No binaries permitted for soursop: https://archive1.piwheels.org/simple/soursop/soursop-0.2.7-py3-none-any.whl#sha256=2573288c8dff7321fe570f816f3ec9c19c35d75d7a625bc61c951f36a0553030 (from https://www.piwheels.org/simple/soursop/) (requires-python:>=3.7) 2026-07-06T08:49:38,331 Skipping link: No binaries permitted for soursop: https://archive1.piwheels.org/simple/soursop/SOURSOP-0.2.6-py3-none-any.whl#sha256=b7be5c56a4e069bdcfbe0d571b4668d19c0c6eef3f3c053b0396ca9731466a7d (from https://www.piwheels.org/simple/soursop/) (requires-python:>=3.7) 2026-07-06T08:49:38,332 Skipping link: No binaries permitted for soursop: https://archive1.piwheels.org/simple/soursop/soursop-0.2.4-py3-none-any.whl#sha256=055ad6785e64d9645ecafa7e8eba055df44f8ddc2ef3d42691c30bf5a48017d0 (from https://www.piwheels.org/simple/soursop/) 2026-07-06T08:49:38,333 Skipping link: No binaries permitted for soursop: https://archive1.piwheels.org/simple/soursop/soursop-0.2.3-py3-none-any.whl#sha256=b0fb676d2e457d91b2fef4bf94c4258a983cd3836d0dc771a2079aea2e5169a5 (from https://www.piwheels.org/simple/soursop/) 2026-07-06T08:49:38,333 Skipping link: No binaries permitted for soursop: https://archive1.piwheels.org/simple/soursop/soursop-0.2.2-py3-none-any.whl#sha256=193a5f2f73e4da4acd2750f0cc1f7f5240697dd215ab44e16376e36af6d9f19a (from https://www.piwheels.org/simple/soursop/) 2026-07-06T08:49:38,334 Skipping link: No binaries permitted for soursop: https://archive1.piwheels.org/simple/soursop/soursop-0.2.1-py3-none-any.whl#sha256=a02cbaf07bdd2b38a4e83593f9c40be1ba59b43ed30a580a0cab670406fe4cc3 (from https://www.piwheels.org/simple/soursop/) 2026-07-06T08:49:38,334 Skipping link: No binaries permitted for soursop: https://archive1.piwheels.org/simple/soursop/soursop-0.1.9.2-py3-none-any.whl#sha256=38f02f96c99d39c61c4b99229ec88dc1eef708d72d3e4eeb32241e84492d5df2 (from https://www.piwheels.org/simple/soursop/) 2026-07-06T08:49:38,335 Skipping link: No binaries permitted for soursop: https://archive1.piwheels.org/simple/soursop/soursop-0.1.9-py3-none-any.whl#sha256=14de7fb938ee36216f3e7bd8b74f3f4e87dfe5388e46e0efd5ecf50c47a52aa9 (from https://www.piwheels.org/simple/soursop/) 2026-07-06T08:49:38,336 Skipping link: No binaries permitted for soursop: https://archive1.piwheels.org/simple/soursop/soursop-0.1.6-py3-none-any.whl#sha256=30d39e6ce8c0fe82b8f61b0bb9f711563583bc0b2b891e81c6c730b14371ab7e (from https://www.piwheels.org/simple/soursop/) 2026-07-06T08:49:38,337 Skipping link: not a file: https://www.piwheels.org/simple/soursop/ 2026-07-06T08:49:38,337 Skipping link: not a file: https://pypi.org/simple/soursop/ 2026-07-06T08:49:38,359 Given no hashes to check 1 links for project 'soursop': discarding no candidates 2026-07-06T08:49:38,378 Collecting soursop==2.0.2 2026-07-06T08:49:38,382 Created temporary directory: /tmp/pip-unpack-qrbje7sn 2026-07-06T08:49:38,629 Downloading soursop-2.0.2.tar.gz (12.2 MB) 2026-07-06T08:49:41,740 Added soursop==2.0.2 from https://files.pythonhosted.org/packages/d3/d4/a11285683d7eda067f8a91c9371c5845b0b05c6889b7156ed0bd80c54fbc/soursop-2.0.2.tar.gz to build tracker '/tmp/pip-build-tracker-rvr281jp' 2026-07-06T08:49:41,747 Created temporary directory: /tmp/pip-build-env-6vplusi0 2026-07-06T08:49:41,752 Installing build dependencies: started 2026-07-06T08:49:41,753 Running command pip subprocess to install build dependencies 2026-07-06T08:49:42,883 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-07-06T08:49:43,325 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-07-06T08:49:43,347 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-07-06T08:49:45,192 Collecting setuptools>=61 2026-07-06T08:49:45,212 Using cached setuptools-83.0.0-py3-none-any.whl (1.0 MB) 2026-07-06T08:49:45,380 Collecting versioningit~=2.0 2026-07-06T08:49:45,381 Obtaining dependency information for versioningit~=2.0 from https://archive1.piwheels.org/simple/versioningit/versioningit-2.3.0-py3-none-any.whl.metadata 2026-07-06T08:49:45,603 Downloading https://archive1.piwheels.org/simple/versioningit/versioningit-2.3.0-py3-none-any.whl.metadata (9.4 kB) 2026-07-06T08:49:46,708 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/3a/be/650f9c091ef71cb01d735775d554e068752d3ff63d7943b26316dc401749/numpy-1.21.2.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2026-07-06T08:49:46,716 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/5f/d6/ad58ded26556eaeaa8c971e08b6466f17c4ac4d786cd3d800e26ce59cc01/numpy-1.21.3.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2026-07-06T08:49:46,723 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/fb/48/b0708ebd7718a8933f0d3937513ef8ef2f4f04529f1f66ca86d873043921/numpy-1.21.4.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2026-07-06T08:49:46,730 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/c2/a8/a924a09492bdfee8c2ec3094d0a13f2799800b4fdc9c890738aeeb12c72e/numpy-1.21.5.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2026-07-06T08:49:46,737 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/45/b7/de7b8e67f2232c26af57c205aaad29fe17754f793404f59c8a730c7a191a/numpy-1.21.6.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2026-07-06T08:49:47,190 Link requires a different Python (3.11.2 not in: '>=3.12'): https://files.pythonhosted.org/packages/d3/e1/f2fe8f6113a657a1da83b358b16755e528a602c6976a43724a88f42b482a/numpy-2.5.0rc1.tar.gz (from https://pypi.org/simple/numpy/) (requires-python:>=3.12) 2026-07-06T08:49:47,200 Link requires a different Python (3.11.2 not in: '>=3.12'): https://files.pythonhosted.org/packages/e7/05/3d27272d30698dc0ecb7fdfaa41ad70303b444f81722bb99bce1d818638a/numpy-2.5.0.tar.gz (from https://pypi.org/simple/numpy/) (requires-python:>=3.12) 2026-07-06T08:49:47,209 Link requires a different Python (3.11.2 not in: '>=3.12'): https://files.pythonhosted.org/packages/22/fd/89965aa4ac08c74998539fcbf24fa3540f3e15237fbeb6bcf9c908f4aade/numpy-2.5.1.tar.gz (from https://pypi.org/simple/numpy/) (requires-python:>=3.12) 2026-07-06T08:49:47,533 Collecting numpy 2026-07-06T08:49:47,534 Obtaining dependency information for numpy from https://www.piwheels.org/simple/numpy/numpy-2.4.6-cp311-cp311-linux_armv7l.whl.metadata 2026-07-06T08:49:47,549 Using cached https://www.piwheels.org/simple/numpy/numpy-2.4.6-cp311-cp311-linux_armv7l.whl.metadata (6.6 kB) 2026-07-06T08:49:47,751 Collecting packaging>=17.1 2026-07-06T08:49:47,752 Obtaining dependency information for packaging>=17.1 from https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata 2026-07-06T08:49:47,770 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata (3.5 kB) 2026-07-06T08:49:48,236 Downloading https://archive1.piwheels.org/simple/versioningit/versioningit-2.3.0-py3-none-any.whl (35 kB) 2026-07-06T08:49:48,711 Using cached https://www.piwheels.org/simple/numpy/numpy-2.4.6-cp311-cp311-linux_armv7l.whl (6.3 MB) 2026-07-06T08:49:48,828 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB) 2026-07-06T08:49:48,844 Using cached https://archive1.piwheels.org/simple/versioningit/versioningit-2.3.0-py3-none-any.whl (35 kB) 2026-07-06T08:49:49,433 Using cached https://www.piwheels.org/simple/numpy/numpy-2.4.6-cp311-cp311-linux_armv7l.whl (6.3 MB) 2026-07-06T08:49:49,632 Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB) 2026-07-06T08:49:52,307 Installing collected packages: setuptools, packaging, numpy, versioningit 2026-07-06T08:50:04,493 Creating /tmp/pip-build-env-6vplusi0/overlay/local/bin 2026-07-06T08:50:04,495 changing mode of /tmp/pip-build-env-6vplusi0/overlay/local/bin/f2py to 755 2026-07-06T08:50:04,498 changing mode of /tmp/pip-build-env-6vplusi0/overlay/local/bin/numpy-config to 755 2026-07-06T08:50:04,657 changing mode of /tmp/pip-build-env-6vplusi0/overlay/local/bin/versioningit to 755 2026-07-06T08:50:04,687 Successfully installed numpy-2.4.6 packaging-26.2 setuptools-83.0.0 versioningit-2.3.0 2026-07-06T08:50:05,069 Installing build dependencies: finished with status 'done' 2026-07-06T08:50:05,075 Getting requirements to build wheel: started 2026-07-06T08:50:05,076 Running command Getting requirements to build wheel 2026-07-06T08:50:05,739 /tmp/pip-build-env-6vplusi0/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-07-06T08:50:05,740 !! 2026-07-06T08:50:05,741 ******************************************************************************** 2026-07-06T08:50:05,741 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-07-06T08:50:05,743 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-07-06T08:50:05,743 or your builds will no longer be supported. 2026-07-06T08:50:05,744 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-07-06T08:50:05,745 ******************************************************************************** 2026-07-06T08:50:05,746 !! 2026-07-06T08:50:05,747 corresp(dist, value, root_dir) 2026-07-06T08:50:05,824 /tmp/pip-build-env-6vplusi0/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-07-06T08:50:05,824 !! 2026-07-06T08:50:05,825 ******************************************************************************** 2026-07-06T08:50:05,825 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-07-06T08:50:05,826 License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3) 2026-07-06T08:50:05,827 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-07-06T08:50:05,828 ******************************************************************************** 2026-07-06T08:50:05,829 !! 2026-07-06T08:50:05,829 dist._finalize_license_expression() 2026-07-06T08:50:05,830 /tmp/pip-build-env-6vplusi0/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-07-06T08:50:05,830 !! 2026-07-06T08:50:05,831 ******************************************************************************** 2026-07-06T08:50:05,832 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-07-06T08:50:05,832 License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3) 2026-07-06T08:50:05,834 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-07-06T08:50:05,834 ******************************************************************************** 2026-07-06T08:50:05,835 !! 2026-07-06T08:50:05,836 self._finalize_license_expression() 2026-07-06T08:50:05,839 running egg_info 2026-07-06T08:50:05,846 writing SOURSOP.egg-info/PKG-INFO 2026-07-06T08:50:05,850 writing dependency_links to SOURSOP.egg-info/dependency_links.txt 2026-07-06T08:50:05,853 writing requirements to SOURSOP.egg-info/requires.txt 2026-07-06T08:50:05,854 writing top-level names to SOURSOP.egg-info/top_level.txt 2026-07-06T08:50:05,900 reading manifest file 'SOURSOP.egg-info/SOURCES.txt' 2026-07-06T08:50:05,908 reading manifest template 'MANIFEST.in' 2026-07-06T08:50:05,919 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2026-07-06T08:50:05,920 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2026-07-06T08:50:05,922 warning: no previously-included files matching '*.so' found anywhere in distribution 2026-07-06T08:50:05,952 adding license file 'LICENSE' 2026-07-06T08:50:05,961 writing manifest file 'SOURSOP.egg-info/SOURCES.txt' 2026-07-06T08:50:06,062 Getting requirements to build wheel: finished with status 'done' 2026-07-06T08:50:06,065 Created temporary directory: /tmp/pip-modern-metadata-azle9fi7 2026-07-06T08:50:06,067 Preparing metadata (pyproject.toml): started 2026-07-06T08:50:06,068 Running command Preparing metadata (pyproject.toml) 2026-07-06T08:50:06,676 /tmp/pip-build-env-6vplusi0/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-07-06T08:50:06,677 !! 2026-07-06T08:50:06,678 ******************************************************************************** 2026-07-06T08:50:06,678 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-07-06T08:50:06,680 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-07-06T08:50:06,680 or your builds will no longer be supported. 2026-07-06T08:50:06,682 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-07-06T08:50:06,682 ******************************************************************************** 2026-07-06T08:50:06,683 !! 2026-07-06T08:50:06,684 corresp(dist, value, root_dir) 2026-07-06T08:50:06,752 /tmp/pip-build-env-6vplusi0/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-07-06T08:50:06,753 !! 2026-07-06T08:50:06,754 ******************************************************************************** 2026-07-06T08:50:06,754 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-07-06T08:50:06,755 License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3) 2026-07-06T08:50:06,756 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-07-06T08:50:06,757 ******************************************************************************** 2026-07-06T08:50:06,757 !! 2026-07-06T08:50:06,758 dist._finalize_license_expression() 2026-07-06T08:50:06,758 /tmp/pip-build-env-6vplusi0/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-07-06T08:50:06,759 !! 2026-07-06T08:50:06,760 ******************************************************************************** 2026-07-06T08:50:06,760 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-07-06T08:50:06,761 License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3) 2026-07-06T08:50:06,763 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-07-06T08:50:06,763 ******************************************************************************** 2026-07-06T08:50:06,764 !! 2026-07-06T08:50:06,765 self._finalize_license_expression() 2026-07-06T08:50:06,766 running dist_info 2026-07-06T08:50:06,779 creating /tmp/pip-modern-metadata-azle9fi7/SOURSOP.egg-info 2026-07-06T08:50:06,780 writing /tmp/pip-modern-metadata-azle9fi7/SOURSOP.egg-info/PKG-INFO 2026-07-06T08:50:06,784 writing dependency_links to /tmp/pip-modern-metadata-azle9fi7/SOURSOP.egg-info/dependency_links.txt 2026-07-06T08:50:06,787 writing requirements to /tmp/pip-modern-metadata-azle9fi7/SOURSOP.egg-info/requires.txt 2026-07-06T08:50:06,788 writing top-level names to /tmp/pip-modern-metadata-azle9fi7/SOURSOP.egg-info/top_level.txt 2026-07-06T08:50:06,789 writing manifest file '/tmp/pip-modern-metadata-azle9fi7/SOURSOP.egg-info/SOURCES.txt' 2026-07-06T08:50:06,826 reading manifest file '/tmp/pip-modern-metadata-azle9fi7/SOURSOP.egg-info/SOURCES.txt' 2026-07-06T08:50:06,828 reading manifest template 'MANIFEST.in' 2026-07-06T08:50:06,838 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2026-07-06T08:50:06,839 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2026-07-06T08:50:06,840 warning: no previously-included files matching '*.so' found anywhere in distribution 2026-07-06T08:50:06,869 adding license file 'LICENSE' 2026-07-06T08:50:06,876 writing manifest file '/tmp/pip-modern-metadata-azle9fi7/SOURSOP.egg-info/SOURCES.txt' 2026-07-06T08:50:06,878 creating '/tmp/pip-modern-metadata-azle9fi7/soursop-2.0.2.dist-info' 2026-07-06T08:50:07,005 Preparing metadata (pyproject.toml): finished with status 'done' 2026-07-06T08:50:07,010 Source in /tmp/pip-wheel-sdlyag82/soursop_a525d4898b034057a8460ae567b8d3d8 has version 2.0.2, which satisfies requirement soursop==2.0.2 from https://files.pythonhosted.org/packages/d3/d4/a11285683d7eda067f8a91c9371c5845b0b05c6889b7156ed0bd80c54fbc/soursop-2.0.2.tar.gz 2026-07-06T08:50:07,011 Removed soursop==2.0.2 from https://files.pythonhosted.org/packages/d3/d4/a11285683d7eda067f8a91c9371c5845b0b05c6889b7156ed0bd80c54fbc/soursop-2.0.2.tar.gz from build tracker '/tmp/pip-build-tracker-rvr281jp' 2026-07-06T08:50:07,017 Created temporary directory: /tmp/pip-unpack-dv0kpipf 2026-07-06T08:50:07,018 Building wheels for collected packages: soursop 2026-07-06T08:50:07,022 Created temporary directory: /tmp/pip-wheel-ki6uouhw 2026-07-06T08:50:07,023 Destination directory: /tmp/pip-wheel-ki6uouhw 2026-07-06T08:50:07,025 Building wheel for soursop (pyproject.toml): started 2026-07-06T08:50:07,026 Running command Building wheel for soursop (pyproject.toml) 2026-07-06T08:50:07,626 /tmp/pip-build-env-6vplusi0/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-07-06T08:50:07,627 !! 2026-07-06T08:50:07,628 ******************************************************************************** 2026-07-06T08:50:07,628 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-07-06T08:50:07,629 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-07-06T08:50:07,630 or your builds will no longer be supported. 2026-07-06T08:50:07,630 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-07-06T08:50:07,631 ******************************************************************************** 2026-07-06T08:50:07,632 !! 2026-07-06T08:50:07,632 corresp(dist, value, root_dir) 2026-07-06T08:50:07,698 /tmp/pip-build-env-6vplusi0/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-07-06T08:50:07,698 !! 2026-07-06T08:50:07,700 ******************************************************************************** 2026-07-06T08:50:07,700 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-07-06T08:50:07,701 License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3) 2026-07-06T08:50:07,702 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-07-06T08:50:07,703 ******************************************************************************** 2026-07-06T08:50:07,704 !! 2026-07-06T08:50:07,705 dist._finalize_license_expression() 2026-07-06T08:50:07,705 /tmp/pip-build-env-6vplusi0/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-07-06T08:50:07,706 !! 2026-07-06T08:50:07,707 ******************************************************************************** 2026-07-06T08:50:07,708 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-07-06T08:50:07,709 License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3) 2026-07-06T08:50:07,710 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-07-06T08:50:07,710 ******************************************************************************** 2026-07-06T08:50:07,712 !! 2026-07-06T08:50:07,712 self._finalize_license_expression() 2026-07-06T08:50:07,713 running bdist_wheel 2026-07-06T08:50:07,730 running build 2026-07-06T08:50:07,731 running build_py 2026-07-06T08:50:07,738 creating build/lib/soursop 2026-07-06T08:50:07,740 copying soursop/_version.py -> build/lib/soursop 2026-07-06T08:50:07,742 copying soursop/sshdx.py -> build/lib/soursop 2026-07-06T08:50:07,745 copying soursop/_internal_data.py -> build/lib/soursop 2026-07-06T08:50:07,748 copying soursop/ssdata.py -> build/lib/soursop 2026-07-06T08:50:07,750 copying soursop/ssio.py -> build/lib/soursop 2026-07-06T08:50:07,751 copying soursop/soursop.py -> build/lib/soursop 2026-07-06T08:50:07,753 copying soursop/sstools.py -> build/lib/soursop 2026-07-06T08:50:07,756 copying soursop/ssutils.py -> build/lib/soursop 2026-07-06T08:50:07,758 copying soursop/ssprotein.py -> build/lib/soursop 2026-07-06T08:50:07,764 copying soursop/ssnmr.py -> build/lib/soursop 2026-07-06T08:50:07,767 copying soursop/sstrajectory.py -> build/lib/soursop 2026-07-06T08:50:07,770 copying soursop/__init__.py -> build/lib/soursop 2026-07-06T08:50:07,772 copying soursop/ssexceptions.py -> build/lib/soursop 2026-07-06T08:50:07,774 copying soursop/configs.py -> build/lib/soursop 2026-07-06T08:50:07,776 copying soursop/sscoper.py -> build/lib/soursop 2026-07-06T08:50:07,779 copying soursop/sssampling.py -> build/lib/soursop 2026-07-06T08:50:07,782 copying soursop/sspolymer.py -> build/lib/soursop 2026-07-06T08:50:07,784 copying soursop/ssmutualinformation.py -> build/lib/soursop 2026-07-06T08:50:07,786 copying soursop/sspre.py -> build/lib/soursop 2026-07-06T08:50:07,789 copying soursop/ssbme.py -> build/lib/soursop 2026-07-06T08:50:07,793 creating build/lib/soursop/tests 2026-07-06T08:50:07,794 copying soursop/tests/test_sscoper.py -> build/lib/soursop/tests 2026-07-06T08:50:07,796 copying soursop/tests/test_ssmutual_information.py -> build/lib/soursop/tests 2026-07-06T08:50:07,798 copying soursop/tests/test_ssnmr.py -> build/lib/soursop/tests 2026-07-06T08:50:07,801 copying soursop/tests/test_sssampling.py -> build/lib/soursop/tests 2026-07-06T08:50:07,802 copying soursop/tests/test_soursop.py -> build/lib/soursop/tests 2026-07-06T08:50:07,804 copying soursop/tests/test_sshdx.py -> build/lib/soursop/tests 2026-07-06T08:50:07,806 copying soursop/tests/test_ssnmr_extended.py -> build/lib/soursop/tests 2026-07-06T08:50:07,808 copying soursop/tests/test_ssbme.py -> build/lib/soursop/tests 2026-07-06T08:50:07,810 copying soursop/tests/test_ssproteins.py -> build/lib/soursop/tests 2026-07-06T08:50:07,813 copying soursop/tests/test_caps.py -> build/lib/soursop/tests 2026-07-06T08:50:07,815 copying soursop/tests/conftest.py -> build/lib/soursop/tests 2026-07-06T08:50:07,817 copying soursop/tests/test_ssutils.py -> build/lib/soursop/tests 2026-07-06T08:50:07,819 copying soursop/tests/test_weights.py -> build/lib/soursop/tests 2026-07-06T08:50:07,822 copying soursop/tests/test_sstrajectory.py -> build/lib/soursop/tests 2026-07-06T08:50:07,825 copying soursop/tests/__init__.py -> build/lib/soursop/tests 2026-07-06T08:50:07,827 copying soursop/tests/test_swan.py -> build/lib/soursop/tests 2026-07-06T08:50:07,829 copying soursop/tests/test_reference_observables.py -> build/lib/soursop/tests 2026-07-06T08:50:07,831 copying soursop/tests/test_sspre.py -> build/lib/soursop/tests 2026-07-06T08:50:07,834 creating build/lib/soursop/plugins 2026-07-06T08:50:07,835 copying soursop/plugins/__init__.py -> build/lib/soursop/plugins 2026-07-06T08:50:07,837 creating build/lib/soursop/tests/build_reference 2026-07-06T08:50:07,838 copying soursop/tests/build_reference/__init__.py -> build/lib/soursop/tests/build_reference 2026-07-06T08:50:07,840 copying soursop/tests/build_reference/build_references.py -> build/lib/soursop/tests/build_reference 2026-07-06T08:50:07,843 creating build/lib/soursop/plugins/sparrow_plugin 2026-07-06T08:50:07,844 copying soursop/plugins/sparrow_plugin/__init__.py -> build/lib/soursop/plugins/sparrow_plugin 2026-07-06T08:50:07,851 running egg_info 2026-07-06T08:50:07,863 writing SOURSOP.egg-info/PKG-INFO 2026-07-06T08:50:07,867 writing dependency_links to SOURSOP.egg-info/dependency_links.txt 2026-07-06T08:50:07,868 writing requirements to SOURSOP.egg-info/requires.txt 2026-07-06T08:50:07,869 writing top-level names to SOURSOP.egg-info/top_level.txt 2026-07-06T08:50:07,894 reading manifest file 'SOURSOP.egg-info/SOURCES.txt' 2026-07-06T08:50:07,901 reading manifest template 'MANIFEST.in' 2026-07-06T08:50:07,912 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2026-07-06T08:50:07,913 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2026-07-06T08:50:07,914 warning: no previously-included files matching '*.so' found anywhere in distribution 2026-07-06T08:50:07,942 adding license file 'LICENSE' 2026-07-06T08:50:07,951 writing manifest file 'SOURSOP.egg-info/SOURCES.txt' 2026-07-06T08:50:07,966 copying soursop/tests/test_scratchpad.ipynb -> build/lib/soursop/tests 2026-07-06T08:50:07,970 creating build/lib/soursop/data 2026-07-06T08:50:07,971 copying soursop/data/SASA_SUMMARY.csv -> build/lib/soursop/data 2026-07-06T08:50:07,973 copying soursop/data/bbseg2.dat -> build/lib/soursop/data 2026-07-06T08:50:07,975 copying soursop/data/phi_excluded_volume_tripeptides.pickle -> build/lib/soursop/data 2026-07-06T08:50:07,992 copying soursop/data/psi_excluded_volume_tripeptides.pickle -> build/lib/soursop/data 2026-07-06T08:50:08,011 creating build/lib/soursop/data/test_data 2026-07-06T08:50:08,011 copying soursop/data/test_data/all_residues_AA.pdb -> build/lib/soursop/data/test_data 2026-07-06T08:50:08,014 copying soursop/data/test_data/all_residues_AA.xtc -> build/lib/soursop/data/test_data 2026-07-06T08:50:08,017 copying soursop/data/test_data/ctl9_AA.pdb -> build/lib/soursop/data/test_data 2026-07-06T08:50:08,021 copying soursop/data/test_data/ctl9_AA.xtc -> build/lib/soursop/data/test_data 2026-07-06T08:50:08,106 copying soursop/data/test_data/ctl9_AA_reference.pkl -> build/lib/soursop/data/test_data 2026-07-06T08:50:08,150 copying soursop/data/test_data/gs6_AA.dcd -> build/lib/soursop/data/test_data 2026-07-06T08:50:08,152 copying soursop/data/test_data/gs6_AA.pdb -> build/lib/soursop/data/test_data 2026-07-06T08:50:08,155 copying soursop/data/test_data/gs6_AA.xtc -> build/lib/soursop/data/test_data 2026-07-06T08:50:08,157 copying soursop/data/test_data/gs6_AA_reference.pkl -> build/lib/soursop/data/test_data 2026-07-06T08:50:08,160 copying soursop/data/test_data/gs6_distance_map_mean.npy -> build/lib/soursop/data/test_data 2026-07-06T08:50:08,162 copying soursop/data/test_data/gs6_distance_map_std.npy -> build/lib/soursop/data/test_data 2026-07-06T08:50:08,164 copying soursop/data/test_data/gs6_invalid_r1.pdb -> build/lib/soursop/data/test_data 2026-07-06T08:50:08,166 copying soursop/data/test_data/ntl9_AA.pdb -> build/lib/soursop/data/test_data 2026-07-06T08:50:08,170 copying soursop/data/test_data/ntl9_AA.xtc -> build/lib/soursop/data/test_data 2026-07-06T08:50:08,173 copying soursop/data/test_data/ntl9_AA_reference.pkl -> build/lib/soursop/data/test_data 2026-07-06T08:50:08,196 copying soursop/data/test_data/ntl9_distance_map_mean.npy -> build/lib/soursop/data/test_data 2026-07-06T08:50:08,199 copying soursop/data/test_data/ntl9_distance_map_std.npy -> build/lib/soursop/data/test_data 2026-07-06T08:50:08,202 copying soursop/data/test_data/sigA_CG.pdb -> build/lib/soursop/data/test_data 2026-07-06T08:50:08,205 copying soursop/data/test_data/sigA_CG.xtc -> build/lib/soursop/data/test_data 2026-07-06T08:50:08,209 copying soursop/data/test_data/sigA_CG_reference.pkl -> build/lib/soursop/data/test_data 2026-07-06T08:50:08,311 copying soursop/data/test_data/synth_1_CG.pdb -> build/lib/soursop/data/test_data 2026-07-06T08:50:08,314 copying soursop/data/test_data/synth_1_CG.xtc -> build/lib/soursop/data/test_data 2026-07-06T08:50:08,317 copying soursop/data/test_data/synth_1_CG_reference.pkl -> build/lib/soursop/data/test_data 2026-07-06T08:50:08,344 creating build/lib/soursop/data/test_data/gromacs1chain 2026-07-06T08:50:08,346 copying soursop/data/test_data/gromacs1chain/top.pdb -> build/lib/soursop/data/test_data/gromacs1chain 2026-07-06T08:50:08,350 copying soursop/data/test_data/gromacs1chain/traj.xtc -> build/lib/soursop/data/test_data/gromacs1chain 2026-07-06T08:50:08,354 creating build/lib/soursop/data/test_data/pre_data 2026-07-06T08:50:08,355 copying soursop/data/test_data/pre_data/PRE_109_unweighted.csv -> build/lib/soursop/data/test_data/pre_data 2026-07-06T08:50:08,358 copying soursop/data/test_data/pre_data/PRE_119_unweighted.csv -> build/lib/soursop/data/test_data/pre_data 2026-07-06T08:50:08,360 copying soursop/data/test_data/pre_data/PRE_149_unweighted.csv -> build/lib/soursop/data/test_data/pre_data 2026-07-06T08:50:08,363 copying soursop/data/test_data/pre_data/PRE_61_unweighted.csv -> build/lib/soursop/data/test_data/pre_data 2026-07-06T08:50:08,365 copying soursop/data/test_data/pre_data/PRE_74_unweighted.csv -> build/lib/soursop/data/test_data/pre_data 2026-07-06T08:50:08,368 copying soursop/data/test_data/pre_data/PRE_96_unweighted.csv -> build/lib/soursop/data/test_data/pre_data 2026-07-06T08:50:08,370 creating build/lib/soursop/data/test_data/cap_tests 2026-07-06T08:50:08,372 copying soursop/data/test_data/cap_tests/ACD_start_1.pdb -> build/lib/soursop/data/test_data/cap_tests 2026-07-06T08:50:08,374 copying soursop/data/test_data/cap_tests/ACD_start_10.pdb -> build/lib/soursop/data/test_data/cap_tests 2026-07-06T08:50:08,377 copying soursop/data/test_data/cap_tests/ACE_NH2.pdb -> build/lib/soursop/data/test_data/cap_tests 2026-07-06T08:50:08,379 copying soursop/data/test_data/cap_tests/ACE_NME.pdb -> build/lib/soursop/data/test_data/cap_tests 2026-07-06T08:50:08,382 copying soursop/data/test_data/cap_tests/ACE_NME_multichain.pdb -> build/lib/soursop/data/test_data/cap_tests 2026-07-06T08:50:08,385 copying soursop/data/test_data/cap_tests/ACE_NME_start_at_5.pdb -> build/lib/soursop/data/test_data/cap_tests 2026-07-06T08:50:08,388 copying soursop/data/test_data/cap_tests/ACE_UCAP.pdb -> build/lib/soursop/data/test_data/cap_tests 2026-07-06T08:50:08,391 copying soursop/data/test_data/cap_tests/FOR_NH2.pdb -> build/lib/soursop/data/test_data/cap_tests 2026-07-06T08:50:08,394 copying soursop/data/test_data/cap_tests/FOR_NME.pdb -> build/lib/soursop/data/test_data/cap_tests 2026-07-06T08:50:08,397 copying soursop/data/test_data/cap_tests/FOR_UCAP.pdb -> build/lib/soursop/data/test_data/cap_tests 2026-07-06T08:50:08,399 copying soursop/data/test_data/cap_tests/UCAP_NH2.pdb -> build/lib/soursop/data/test_data/cap_tests 2026-07-06T08:50:08,402 copying soursop/data/test_data/cap_tests/UCAP_NME.pdb -> build/lib/soursop/data/test_data/cap_tests 2026-07-06T08:50:08,405 copying soursop/data/test_data/cap_tests/UCAP_UCAP.pdb -> build/lib/soursop/data/test_data/cap_tests 2026-07-06T08:50:08,408 copying soursop/data/test_data/cap_tests/__START.pdb -> build/lib/soursop/data/test_data/cap_tests 2026-07-06T08:50:08,410 creating build/lib/soursop/data/test_data/swan_trajectories 2026-07-06T08:50:08,412 copying soursop/data/test_data/swan_trajectories/Ash1.pdb -> build/lib/soursop/data/test_data/swan_trajectories 2026-07-06T08:50:08,415 copying soursop/data/test_data/swan_trajectories/Ash1.xtc -> build/lib/soursop/data/test_data/swan_trajectories 2026-07-06T08:50:08,426 copying soursop/data/test_data/swan_trajectories/alpha_syn.pdb -> build/lib/soursop/data/test_data/swan_trajectories 2026-07-06T08:50:08,430 copying soursop/data/test_data/swan_trajectories/alpha_syn.xtc -> build/lib/soursop/data/test_data/swan_trajectories 2026-07-06T08:50:08,445 copying soursop/data/test_data/swan_trajectories/helix.pdb -> build/lib/soursop/data/test_data/swan_trajectories 2026-07-06T08:50:08,448 copying soursop/data/test_data/swan_trajectories/helix.xtc -> build/lib/soursop/data/test_data/swan_trajectories 2026-07-06T08:50:08,454 creating build/lib/soursop/data/test_data/gromacs2chains 2026-07-06T08:50:08,455 copying soursop/data/test_data/gromacs2chains/top.pdb -> build/lib/soursop/data/test_data/gromacs2chains 2026-07-06T08:50:08,459 copying soursop/data/test_data/gromacs2chains/traj.xtc -> build/lib/soursop/data/test_data/gromacs2chains 2026-07-06T08:50:08,463 creating build/lib/soursop/data/test_data/sampling_quality/EV/1 2026-07-06T08:50:08,465 copying soursop/data/test_data/sampling_quality/EV/1/__START.pdb -> build/lib/soursop/data/test_data/sampling_quality/EV/1 2026-07-06T08:50:08,467 copying soursop/data/test_data/sampling_quality/EV/1/__traj.xtc -> build/lib/soursop/data/test_data/sampling_quality/EV/1 2026-07-06T08:50:08,472 creating build/lib/soursop/data/test_data/sampling_quality/EV/2 2026-07-06T08:50:08,473 copying soursop/data/test_data/sampling_quality/EV/2/__START.pdb -> build/lib/soursop/data/test_data/sampling_quality/EV/2 2026-07-06T08:50:08,476 copying soursop/data/test_data/sampling_quality/EV/2/__traj.xtc -> build/lib/soursop/data/test_data/sampling_quality/EV/2 2026-07-06T08:50:08,480 creating build/lib/soursop/data/test_data/sampling_quality/EV/3 2026-07-06T08:50:08,481 copying soursop/data/test_data/sampling_quality/EV/3/__START.pdb -> build/lib/soursop/data/test_data/sampling_quality/EV/3 2026-07-06T08:50:08,484 copying soursop/data/test_data/sampling_quality/EV/3/__traj.xtc -> build/lib/soursop/data/test_data/sampling_quality/EV/3 2026-07-06T08:50:08,489 creating build/lib/soursop/data/test_data/sampling_quality/WT/1 2026-07-06T08:50:08,490 copying soursop/data/test_data/sampling_quality/WT/1/__START.pdb -> build/lib/soursop/data/test_data/sampling_quality/WT/1 2026-07-06T08:50:08,493 copying soursop/data/test_data/sampling_quality/WT/1/__traj.xtc -> build/lib/soursop/data/test_data/sampling_quality/WT/1 2026-07-06T08:50:08,498 creating build/lib/soursop/data/test_data/sampling_quality/WT/2 2026-07-06T08:50:08,499 copying soursop/data/test_data/sampling_quality/WT/2/__START.pdb -> build/lib/soursop/data/test_data/sampling_quality/WT/2 2026-07-06T08:50:08,502 copying soursop/data/test_data/sampling_quality/WT/2/__traj.xtc -> build/lib/soursop/data/test_data/sampling_quality/WT/2 2026-07-06T08:50:08,507 creating build/lib/soursop/data/test_data/sampling_quality/WT/3 2026-07-06T08:50:08,508 copying soursop/data/test_data/sampling_quality/WT/3/__START.pdb -> build/lib/soursop/data/test_data/sampling_quality/WT/3 2026-07-06T08:50:08,510 copying soursop/data/test_data/sampling_quality/WT/3/__traj.xtc -> build/lib/soursop/data/test_data/sampling_quality/WT/3 2026-07-06T08:50:08,534 installing to build/bdist.linux-armv7l/wheel 2026-07-06T08:50:08,535 running install 2026-07-06T08:50:08,559 running install_lib 2026-07-06T08:50:08,567 creating build/bdist.linux-armv7l/wheel 2026-07-06T08:50:08,569 creating build/bdist.linux-armv7l/wheel/soursop 2026-07-06T08:50:08,571 creating build/bdist.linux-armv7l/wheel/soursop/tests 2026-07-06T08:50:08,573 copying build/lib/soursop/tests/test_sscoper.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-07-06T08:50:08,575 copying build/lib/soursop/tests/test_ssmutual_information.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-07-06T08:50:08,578 creating build/bdist.linux-armv7l/wheel/soursop/tests/build_reference 2026-07-06T08:50:08,579 copying build/lib/soursop/tests/build_reference/__init__.py -> build/bdist.linux-armv7l/wheel/./soursop/tests/build_reference 2026-07-06T08:50:08,581 copying build/lib/soursop/tests/build_reference/build_references.py -> build/bdist.linux-armv7l/wheel/./soursop/tests/build_reference 2026-07-06T08:50:08,584 copying build/lib/soursop/tests/test_ssnmr.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-07-06T08:50:08,587 copying build/lib/soursop/tests/test_sssampling.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-07-06T08:50:08,590 copying build/lib/soursop/tests/test_soursop.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-07-06T08:50:08,592 copying build/lib/soursop/tests/test_sshdx.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-07-06T08:50:08,594 copying build/lib/soursop/tests/test_ssnmr_extended.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-07-06T08:50:08,596 copying build/lib/soursop/tests/test_ssbme.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-07-06T08:50:08,599 copying build/lib/soursop/tests/test_ssproteins.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-07-06T08:50:08,602 copying build/lib/soursop/tests/test_caps.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-07-06T08:50:08,605 copying build/lib/soursop/tests/conftest.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-07-06T08:50:08,607 copying build/lib/soursop/tests/test_ssutils.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-07-06T08:50:08,609 copying build/lib/soursop/tests/test_weights.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-07-06T08:50:08,612 copying build/lib/soursop/tests/test_sstrajectory.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-07-06T08:50:08,615 copying build/lib/soursop/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-07-06T08:50:08,617 copying build/lib/soursop/tests/test_swan.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-07-06T08:50:08,619 copying build/lib/soursop/tests/test_reference_observables.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-07-06T08:50:08,621 copying build/lib/soursop/tests/test_scratchpad.ipynb -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-07-06T08:50:08,626 copying build/lib/soursop/tests/test_sspre.py -> build/bdist.linux-armv7l/wheel/./soursop/tests 2026-07-06T08:50:08,628 copying build/lib/soursop/_version.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-07-06T08:50:08,629 copying build/lib/soursop/sshdx.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-07-06T08:50:08,632 copying build/lib/soursop/_internal_data.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-07-06T08:50:08,634 copying build/lib/soursop/ssdata.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-07-06T08:50:08,636 creating build/bdist.linux-armv7l/wheel/soursop/plugins 2026-07-06T08:50:08,638 creating build/bdist.linux-armv7l/wheel/soursop/plugins/sparrow_plugin 2026-07-06T08:50:08,639 copying build/lib/soursop/plugins/sparrow_plugin/__init__.py -> build/bdist.linux-armv7l/wheel/./soursop/plugins/sparrow_plugin 2026-07-06T08:50:08,641 copying build/lib/soursop/plugins/__init__.py -> build/bdist.linux-armv7l/wheel/./soursop/plugins 2026-07-06T08:50:08,643 copying build/lib/soursop/ssio.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-07-06T08:50:08,644 copying build/lib/soursop/soursop.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-07-06T08:50:08,646 copying build/lib/soursop/sstools.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-07-06T08:50:08,649 copying build/lib/soursop/ssutils.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-07-06T08:50:08,651 copying build/lib/soursop/ssprotein.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-07-06T08:50:08,657 copying build/lib/soursop/ssnmr.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-07-06T08:50:08,660 copying build/lib/soursop/sstrajectory.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-07-06T08:50:08,663 copying build/lib/soursop/__init__.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-07-06T08:50:08,665 copying build/lib/soursop/ssexceptions.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-07-06T08:50:08,667 copying build/lib/soursop/configs.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-07-06T08:50:08,669 creating build/bdist.linux-armv7l/wheel/soursop/data 2026-07-06T08:50:08,671 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data 2026-07-06T08:50:08,672 copying build/lib/soursop/data/test_data/synth_1_CG.xtc -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-07-06T08:50:08,676 copying build/lib/soursop/data/test_data/ntl9_distance_map_mean.npy -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-07-06T08:50:08,678 copying build/lib/soursop/data/test_data/synth_1_CG.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-07-06T08:50:08,681 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data/gromacs1chain 2026-07-06T08:50:08,682 copying build/lib/soursop/data/test_data/gromacs1chain/traj.xtc -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/gromacs1chain 2026-07-06T08:50:08,686 copying build/lib/soursop/data/test_data/gromacs1chain/top.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/gromacs1chain 2026-07-06T08:50:08,691 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data/sampling_quality 2026-07-06T08:50:08,692 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data/sampling_quality/EV 2026-07-06T08:50:08,695 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data/sampling_quality/EV/1 2026-07-06T08:50:08,696 copying build/lib/soursop/data/test_data/sampling_quality/EV/1/__START.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/sampling_quality/EV/1 2026-07-06T08:50:08,699 copying build/lib/soursop/data/test_data/sampling_quality/EV/1/__traj.xtc -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/sampling_quality/EV/1 2026-07-06T08:50:08,704 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data/sampling_quality/EV/2 2026-07-06T08:50:08,705 copying build/lib/soursop/data/test_data/sampling_quality/EV/2/__START.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/sampling_quality/EV/2 2026-07-06T08:50:08,708 copying build/lib/soursop/data/test_data/sampling_quality/EV/2/__traj.xtc -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/sampling_quality/EV/2 2026-07-06T08:50:08,713 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data/sampling_quality/EV/3 2026-07-06T08:50:08,714 copying build/lib/soursop/data/test_data/sampling_quality/EV/3/__START.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/sampling_quality/EV/3 2026-07-06T08:50:08,717 copying build/lib/soursop/data/test_data/sampling_quality/EV/3/__traj.xtc -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/sampling_quality/EV/3 2026-07-06T08:50:08,722 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data/sampling_quality/WT 2026-07-06T08:50:08,724 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data/sampling_quality/WT/1 2026-07-06T08:50:08,726 copying build/lib/soursop/data/test_data/sampling_quality/WT/1/__START.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/sampling_quality/WT/1 2026-07-06T08:50:08,728 copying build/lib/soursop/data/test_data/sampling_quality/WT/1/__traj.xtc -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/sampling_quality/WT/1 2026-07-06T08:50:08,732 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data/sampling_quality/WT/2 2026-07-06T08:50:08,734 copying build/lib/soursop/data/test_data/sampling_quality/WT/2/__START.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/sampling_quality/WT/2 2026-07-06T08:50:08,736 copying build/lib/soursop/data/test_data/sampling_quality/WT/2/__traj.xtc -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/sampling_quality/WT/2 2026-07-06T08:50:08,741 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data/sampling_quality/WT/3 2026-07-06T08:50:08,742 copying build/lib/soursop/data/test_data/sampling_quality/WT/3/__START.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/sampling_quality/WT/3 2026-07-06T08:50:08,744 copying build/lib/soursop/data/test_data/sampling_quality/WT/3/__traj.xtc -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/sampling_quality/WT/3 2026-07-06T08:50:08,748 copying build/lib/soursop/data/test_data/gs6_AA_reference.pkl -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-07-06T08:50:08,751 copying build/lib/soursop/data/test_data/sigA_CG.xtc -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-07-06T08:50:08,756 copying build/lib/soursop/data/test_data/gs6_AA.xtc -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-07-06T08:50:08,760 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data/pre_data 2026-07-06T08:50:08,761 copying build/lib/soursop/data/test_data/pre_data/PRE_96_unweighted.csv -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/pre_data 2026-07-06T08:50:08,764 copying build/lib/soursop/data/test_data/pre_data/PRE_61_unweighted.csv -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/pre_data 2026-07-06T08:50:08,767 copying build/lib/soursop/data/test_data/pre_data/PRE_74_unweighted.csv -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/pre_data 2026-07-06T08:50:08,770 copying build/lib/soursop/data/test_data/pre_data/PRE_119_unweighted.csv -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/pre_data 2026-07-06T08:50:08,773 copying build/lib/soursop/data/test_data/pre_data/PRE_109_unweighted.csv -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/pre_data 2026-07-06T08:50:08,775 copying build/lib/soursop/data/test_data/pre_data/PRE_149_unweighted.csv -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/pre_data 2026-07-06T08:50:08,778 copying build/lib/soursop/data/test_data/gs6_invalid_r1.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-07-06T08:50:08,781 copying build/lib/soursop/data/test_data/all_residues_AA.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-07-06T08:50:08,785 copying build/lib/soursop/data/test_data/gs6_distance_map_mean.npy -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-07-06T08:50:08,788 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data/cap_tests 2026-07-06T08:50:08,789 copying build/lib/soursop/data/test_data/cap_tests/ACE_NH2.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/cap_tests 2026-07-06T08:50:08,791 copying build/lib/soursop/data/test_data/cap_tests/UCAP_UCAP.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/cap_tests 2026-07-06T08:50:08,794 copying build/lib/soursop/data/test_data/cap_tests/ACD_start_1.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/cap_tests 2026-07-06T08:50:08,796 copying build/lib/soursop/data/test_data/cap_tests/ACE_NME.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/cap_tests 2026-07-06T08:50:08,799 copying build/lib/soursop/data/test_data/cap_tests/UCAP_NME.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/cap_tests 2026-07-06T08:50:08,801 copying build/lib/soursop/data/test_data/cap_tests/FOR_UCAP.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/cap_tests 2026-07-06T08:50:08,804 copying build/lib/soursop/data/test_data/cap_tests/ACE_NME_multichain.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/cap_tests 2026-07-06T08:50:08,807 copying build/lib/soursop/data/test_data/cap_tests/ACE_NME_start_at_5.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/cap_tests 2026-07-06T08:50:08,809 copying build/lib/soursop/data/test_data/cap_tests/__START.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/cap_tests 2026-07-06T08:50:08,812 copying build/lib/soursop/data/test_data/cap_tests/ACD_start_10.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/cap_tests 2026-07-06T08:50:08,814 copying build/lib/soursop/data/test_data/cap_tests/FOR_NME.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/cap_tests 2026-07-06T08:50:08,816 copying build/lib/soursop/data/test_data/cap_tests/FOR_NH2.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/cap_tests 2026-07-06T08:50:08,819 copying build/lib/soursop/data/test_data/cap_tests/UCAP_NH2.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/cap_tests 2026-07-06T08:50:08,822 copying build/lib/soursop/data/test_data/cap_tests/ACE_UCAP.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/cap_tests 2026-07-06T08:50:08,824 copying build/lib/soursop/data/test_data/all_residues_AA.xtc -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-07-06T08:50:08,827 copying build/lib/soursop/data/test_data/sigA_CG_reference.pkl -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-07-06T08:50:08,945 copying build/lib/soursop/data/test_data/ctl9_AA.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-07-06T08:50:08,950 copying build/lib/soursop/data/test_data/gs6_AA.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-07-06T08:50:08,952 copying build/lib/soursop/data/test_data/ntl9_distance_map_std.npy -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-07-06T08:50:08,955 copying build/lib/soursop/data/test_data/ntl9_AA.xtc -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-07-06T08:50:08,957 copying build/lib/soursop/data/test_data/gs6_AA.dcd -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-07-06T08:50:08,960 copying build/lib/soursop/data/test_data/ntl9_AA_reference.pkl -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-07-06T08:50:08,980 copying build/lib/soursop/data/test_data/ctl9_AA.xtc -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-07-06T08:50:09,071 copying build/lib/soursop/data/test_data/sigA_CG.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-07-06T08:50:09,074 copying build/lib/soursop/data/test_data/synth_1_CG_reference.pkl -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-07-06T08:50:09,099 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data/swan_trajectories 2026-07-06T08:50:09,100 copying build/lib/soursop/data/test_data/swan_trajectories/Ash1.xtc -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/swan_trajectories 2026-07-06T08:50:09,108 copying build/lib/soursop/data/test_data/swan_trajectories/alpha_syn.xtc -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/swan_trajectories 2026-07-06T08:50:09,119 copying build/lib/soursop/data/test_data/swan_trajectories/Ash1.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/swan_trajectories 2026-07-06T08:50:09,121 copying build/lib/soursop/data/test_data/swan_trajectories/helix.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/swan_trajectories 2026-07-06T08:50:09,124 copying build/lib/soursop/data/test_data/swan_trajectories/helix.xtc -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/swan_trajectories 2026-07-06T08:50:09,131 copying build/lib/soursop/data/test_data/swan_trajectories/alpha_syn.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/swan_trajectories 2026-07-06T08:50:09,134 copying build/lib/soursop/data/test_data/ctl9_AA_reference.pkl -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-07-06T08:50:09,175 copying build/lib/soursop/data/test_data/gs6_distance_map_std.npy -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-07-06T08:50:09,177 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data/gromacs2chains 2026-07-06T08:50:09,179 copying build/lib/soursop/data/test_data/gromacs2chains/traj.xtc -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/gromacs2chains 2026-07-06T08:50:09,182 copying build/lib/soursop/data/test_data/gromacs2chains/top.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data/gromacs2chains 2026-07-06T08:50:09,186 copying build/lib/soursop/data/test_data/ntl9_AA.pdb -> build/bdist.linux-armv7l/wheel/./soursop/data/test_data 2026-07-06T08:50:09,189 copying build/lib/soursop/data/bbseg2.dat -> build/bdist.linux-armv7l/wheel/./soursop/data 2026-07-06T08:50:09,191 copying build/lib/soursop/data/SASA_SUMMARY.csv -> build/bdist.linux-armv7l/wheel/./soursop/data 2026-07-06T08:50:09,193 copying build/lib/soursop/data/psi_excluded_volume_tripeptides.pickle -> build/bdist.linux-armv7l/wheel/./soursop/data 2026-07-06T08:50:09,211 copying build/lib/soursop/data/phi_excluded_volume_tripeptides.pickle -> build/bdist.linux-armv7l/wheel/./soursop/data 2026-07-06T08:50:09,227 copying build/lib/soursop/sscoper.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-07-06T08:50:09,231 copying build/lib/soursop/sssampling.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-07-06T08:50:09,234 copying build/lib/soursop/sspolymer.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-07-06T08:50:09,236 copying build/lib/soursop/ssmutualinformation.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-07-06T08:50:09,238 copying build/lib/soursop/sspre.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-07-06T08:50:09,241 copying build/lib/soursop/ssbme.py -> build/bdist.linux-armv7l/wheel/./soursop 2026-07-06T08:50:09,244 running install_egg_info 2026-07-06T08:50:09,250 Copying SOURSOP.egg-info to build/bdist.linux-armv7l/wheel/./SOURSOP-2.0.2-py3.11.egg-info 2026-07-06T08:50:09,262 running install_scripts 2026-07-06T08:50:09,273 creating build/bdist.linux-armv7l/wheel/soursop-2.0.2.dist-info/WHEEL 2026-07-06T08:50:09,276 creating '/tmp/pip-wheel-ki6uouhw/.tmp-9up3i845/soursop-2.0.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-07-06T08:50:09,278 adding 'soursop/__init__.py' 2026-07-06T08:50:09,280 adding 'soursop/_internal_data.py' 2026-07-06T08:50:09,282 adding 'soursop/_version.py' 2026-07-06T08:50:09,283 adding 'soursop/configs.py' 2026-07-06T08:50:09,284 adding 'soursop/soursop.py' 2026-07-06T08:50:09,292 adding 'soursop/ssbme.py' 2026-07-06T08:50:09,299 adding 'soursop/sscoper.py' 2026-07-06T08:50:09,301 adding 'soursop/ssdata.py' 2026-07-06T08:50:09,302 adding 'soursop/ssexceptions.py' 2026-07-06T08:50:09,304 adding 'soursop/sshdx.py' 2026-07-06T08:50:09,305 adding 'soursop/ssio.py' 2026-07-06T08:50:09,307 adding 'soursop/ssmutualinformation.py' 2026-07-06T08:50:09,312 adding 'soursop/ssnmr.py' 2026-07-06T08:50:09,314 adding 'soursop/sspolymer.py' 2026-07-06T08:50:09,318 adding 'soursop/sspre.py' 2026-07-06T08:50:09,348 adding 'soursop/ssprotein.py' 2026-07-06T08:50:09,357 adding 'soursop/sssampling.py' 2026-07-06T08:50:09,359 adding 'soursop/sstools.py' 2026-07-06T08:50:09,366 adding 'soursop/sstrajectory.py' 2026-07-06T08:50:09,371 adding 'soursop/ssutils.py' 2026-07-06T08:50:09,373 adding 'soursop/data/SASA_SUMMARY.csv' 2026-07-06T08:50:09,374 adding 'soursop/data/bbseg2.dat' 2026-07-06T08:50:09,529 adding 'soursop/data/phi_excluded_volume_tripeptides.pickle' 2026-07-06T08:50:09,686 adding 'soursop/data/psi_excluded_volume_tripeptides.pickle' 2026-07-06T08:50:09,697 adding 'soursop/data/test_data/all_residues_AA.pdb' 2026-07-06T08:50:09,699 adding 'soursop/data/test_data/all_residues_AA.xtc' 2026-07-06T08:50:09,717 adding 'soursop/data/test_data/ctl9_AA.pdb' 2026-07-06T08:50:10,446 adding 'soursop/data/test_data/ctl9_AA.xtc' 2026-07-06T08:50:10,671 adding 'soursop/data/test_data/ctl9_AA_reference.pkl' 2026-07-06T08:50:10,690 adding 'soursop/data/test_data/gs6_AA.dcd' 2026-07-06T08:50:10,692 adding 'soursop/data/test_data/gs6_AA.pdb' 2026-07-06T08:50:10,693 adding 'soursop/data/test_data/gs6_AA.xtc' 2026-07-06T08:50:10,697 adding 'soursop/data/test_data/gs6_AA_reference.pkl' 2026-07-06T08:50:10,698 adding 'soursop/data/test_data/gs6_distance_map_mean.npy' 2026-07-06T08:50:10,699 adding 'soursop/data/test_data/gs6_distance_map_std.npy' 2026-07-06T08:50:10,701 adding 'soursop/data/test_data/gs6_invalid_r1.pdb' 2026-07-06T08:50:10,712 adding 'soursop/data/test_data/ntl9_AA.pdb' 2026-07-06T08:50:10,717 adding 'soursop/data/test_data/ntl9_AA.xtc' 2026-07-06T08:50:10,781 adding 'soursop/data/test_data/ntl9_AA_reference.pkl' 2026-07-06T08:50:10,793 adding 'soursop/data/test_data/ntl9_distance_map_mean.npy' 2026-07-06T08:50:10,797 adding 'soursop/data/test_data/ntl9_distance_map_std.npy' 2026-07-06T08:50:10,800 adding 'soursop/data/test_data/sigA_CG.pdb' 2026-07-06T08:50:10,811 adding 'soursop/data/test_data/sigA_CG.xtc' 2026-07-06T08:50:11,269 adding 'soursop/data/test_data/sigA_CG_reference.pkl' 2026-07-06T08:50:11,313 adding 'soursop/data/test_data/synth_1_CG.pdb' 2026-07-06T08:50:11,319 adding 'soursop/data/test_data/synth_1_CG.xtc' 2026-07-06T08:50:11,413 adding 'soursop/data/test_data/synth_1_CG_reference.pkl' 2026-07-06T08:50:11,425 adding 'soursop/data/test_data/cap_tests/ACD_start_1.pdb' 2026-07-06T08:50:11,426 adding 'soursop/data/test_data/cap_tests/ACD_start_10.pdb' 2026-07-06T08:50:11,428 adding 'soursop/data/test_data/cap_tests/ACE_NH2.pdb' 2026-07-06T08:50:11,429 adding 'soursop/data/test_data/cap_tests/ACE_NME.pdb' 2026-07-06T08:50:11,432 adding 'soursop/data/test_data/cap_tests/ACE_NME_multichain.pdb' 2026-07-06T08:50:11,434 adding 'soursop/data/test_data/cap_tests/ACE_NME_start_at_5.pdb' 2026-07-06T08:50:11,435 adding 'soursop/data/test_data/cap_tests/ACE_UCAP.pdb' 2026-07-06T08:50:11,437 adding 'soursop/data/test_data/cap_tests/FOR_NH2.pdb' 2026-07-06T08:50:11,439 adding 'soursop/data/test_data/cap_tests/FOR_NME.pdb' 2026-07-06T08:50:11,441 adding 'soursop/data/test_data/cap_tests/FOR_UCAP.pdb' 2026-07-06T08:50:11,442 adding 'soursop/data/test_data/cap_tests/UCAP_NH2.pdb' 2026-07-06T08:50:11,444 adding 'soursop/data/test_data/cap_tests/UCAP_NME.pdb' 2026-07-06T08:50:11,445 adding 'soursop/data/test_data/cap_tests/UCAP_UCAP.pdb' 2026-07-06T08:50:11,447 adding 'soursop/data/test_data/cap_tests/__START.pdb' 2026-07-06T08:50:11,458 adding 'soursop/data/test_data/gromacs1chain/top.pdb' 2026-07-06T08:50:11,467 adding 'soursop/data/test_data/gromacs1chain/traj.xtc' 2026-07-06T08:50:11,480 adding 'soursop/data/test_data/gromacs2chains/top.pdb' 2026-07-06T08:50:11,489 adding 'soursop/data/test_data/gromacs2chains/traj.xtc' 2026-07-06T08:50:11,492 adding 'soursop/data/test_data/pre_data/PRE_109_unweighted.csv' 2026-07-06T08:50:11,493 adding 'soursop/data/test_data/pre_data/PRE_119_unweighted.csv' 2026-07-06T08:50:11,495 adding 'soursop/data/test_data/pre_data/PRE_149_unweighted.csv' 2026-07-06T08:50:11,496 adding 'soursop/data/test_data/pre_data/PRE_61_unweighted.csv' 2026-07-06T08:50:11,497 adding 'soursop/data/test_data/pre_data/PRE_74_unweighted.csv' 2026-07-06T08:50:11,499 adding 'soursop/data/test_data/pre_data/PRE_96_unweighted.csv' 2026-07-06T08:50:11,502 adding 'soursop/data/test_data/sampling_quality/EV/1/__START.pdb' 2026-07-06T08:50:11,518 adding 'soursop/data/test_data/sampling_quality/EV/1/__traj.xtc' 2026-07-06T08:50:11,520 adding 'soursop/data/test_data/sampling_quality/EV/2/__START.pdb' 2026-07-06T08:50:11,537 adding 'soursop/data/test_data/sampling_quality/EV/2/__traj.xtc' 2026-07-06T08:50:11,539 adding 'soursop/data/test_data/sampling_quality/EV/3/__START.pdb' 2026-07-06T08:50:11,555 adding 'soursop/data/test_data/sampling_quality/EV/3/__traj.xtc' 2026-07-06T08:50:11,558 adding 'soursop/data/test_data/sampling_quality/WT/1/__START.pdb' 2026-07-06T08:50:11,574 adding 'soursop/data/test_data/sampling_quality/WT/1/__traj.xtc' 2026-07-06T08:50:11,577 adding 'soursop/data/test_data/sampling_quality/WT/2/__START.pdb' 2026-07-06T08:50:11,593 adding 'soursop/data/test_data/sampling_quality/WT/2/__traj.xtc' 2026-07-06T08:50:11,596 adding 'soursop/data/test_data/sampling_quality/WT/3/__START.pdb' 2026-07-06T08:50:11,612 adding 'soursop/data/test_data/sampling_quality/WT/3/__traj.xtc' 2026-07-06T08:50:11,616 adding 'soursop/data/test_data/swan_trajectories/Ash1.pdb' 2026-07-06T08:50:11,660 adding 'soursop/data/test_data/swan_trajectories/Ash1.xtc' 2026-07-06T08:50:11,667 adding 'soursop/data/test_data/swan_trajectories/alpha_syn.pdb' 2026-07-06T08:50:11,733 adding 'soursop/data/test_data/swan_trajectories/alpha_syn.xtc' 2026-07-06T08:50:11,739 adding 'soursop/data/test_data/swan_trajectories/helix.pdb' 2026-07-06T08:50:11,774 adding 'soursop/data/test_data/swan_trajectories/helix.xtc' 2026-07-06T08:50:11,778 adding 'soursop/plugins/__init__.py' 2026-07-06T08:50:11,780 adding 'soursop/plugins/sparrow_plugin/__init__.py' 2026-07-06T08:50:11,782 adding 'soursop/tests/__init__.py' 2026-07-06T08:50:11,783 adding 'soursop/tests/conftest.py' 2026-07-06T08:50:11,785 adding 'soursop/tests/test_caps.py' 2026-07-06T08:50:11,787 adding 'soursop/tests/test_reference_observables.py' 2026-07-06T08:50:11,802 adding 'soursop/tests/test_scratchpad.ipynb' 2026-07-06T08:50:11,804 adding 'soursop/tests/test_soursop.py' 2026-07-06T08:50:11,806 adding 'soursop/tests/test_ssbme.py' 2026-07-06T08:50:11,808 adding 'soursop/tests/test_sscoper.py' 2026-07-06T08:50:11,810 adding 'soursop/tests/test_sshdx.py' 2026-07-06T08:50:11,811 adding 'soursop/tests/test_ssmutual_information.py' 2026-07-06T08:50:11,814 adding 'soursop/tests/test_ssnmr.py' 2026-07-06T08:50:11,815 adding 'soursop/tests/test_ssnmr_extended.py' 2026-07-06T08:50:11,817 adding 'soursop/tests/test_sspre.py' 2026-07-06T08:50:11,821 adding 'soursop/tests/test_ssproteins.py' 2026-07-06T08:50:11,823 adding 'soursop/tests/test_sssampling.py' 2026-07-06T08:50:11,826 adding 'soursop/tests/test_sstrajectory.py' 2026-07-06T08:50:11,828 adding 'soursop/tests/test_ssutils.py' 2026-07-06T08:50:11,829 adding 'soursop/tests/test_swan.py' 2026-07-06T08:50:11,832 adding 'soursop/tests/test_weights.py' 2026-07-06T08:50:11,834 adding 'soursop/tests/build_reference/__init__.py' 2026-07-06T08:50:11,838 adding 'soursop/tests/build_reference/build_references.py' 2026-07-06T08:50:11,841 adding 'soursop-2.0.2.dist-info/licenses/LICENSE' 2026-07-06T08:50:11,843 adding 'soursop-2.0.2.dist-info/METADATA' 2026-07-06T08:50:11,844 adding 'soursop-2.0.2.dist-info/WHEEL' 2026-07-06T08:50:11,845 adding 'soursop-2.0.2.dist-info/top_level.txt' 2026-07-06T08:50:11,848 adding 'soursop-2.0.2.dist-info/RECORD' 2026-07-06T08:50:11,984 removing build/bdist.linux-armv7l/wheel 2026-07-06T08:50:12,123 Building wheel for soursop (pyproject.toml): finished with status 'done' 2026-07-06T08:50:12,383 Created wheel for soursop: filename=soursop-2.0.2-py3-none-any.whl size=12263910 sha256=2354a97d0faaf76fa45a36d7565c0fcc736317114bbaeb529e050be3b0787dc7 2026-07-06T08:50:12,384 Stored in directory: /tmp/pip-ephem-wheel-cache-x_dvme1n/wheels/a4/ba/65/6fbd132fabdb4b7f86bd85756b4b4c483872e45c7d1498d375 2026-07-06T08:50:12,403 Successfully built soursop 2026-07-06T08:50:12,696 Removed build tracker: '/tmp/pip-build-tracker-rvr281jp'