2026-07-08T10:55:18,399 Created temporary directory: /tmp/pip-ephem-wheel-cache-r7ldeva2
2026-07-08T10:55:18,401 Created temporary directory: /tmp/pip-build-tracker-rkgvxizr
2026-07-08T10:55:18,402 Initialized build tracking at /tmp/pip-build-tracker-rkgvxizr
2026-07-08T10:55:18,402 Created build tracker: /tmp/pip-build-tracker-rkgvxizr
2026-07-08T10:55:18,402 Entered build tracker: /tmp/pip-build-tracker-rkgvxizr
2026-07-08T10:55:18,403 Created temporary directory: /tmp/pip-wheel-5szh03dy
2026-07-08T10:55:18,406 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-07-08T10:55:18,408 Created temporary directory: /tmp/pip-ephem-wheel-cache-ci096tjo
2026-07-08T10:55:18,431 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-07-08T10:55:18,435 2 location(s) to search for versions of protfasta:
2026-07-08T10:55:18,435 * https://pypi.org/simple/protfasta/
2026-07-08T10:55:18,435 * https://www.piwheels.org/simple/protfasta/
2026-07-08T10:55:18,436 Fetching project page and analyzing links: https://pypi.org/simple/protfasta/
2026-07-08T10:55:18,437 Getting page https://pypi.org/simple/protfasta/
2026-07-08T10:55:18,438 Found index url https://pypi.org/simple
2026-07-08T10:55:18,689 Fetched page https://pypi.org/simple/protfasta/ as application/vnd.pypi.simple.v1+json
2026-07-08T10:55:18,695   Found link https://files.pythonhosted.org/packages/b6/1d/b12d413f49524f7ea99474c3a78de44e5559c74ea790714817405bd21a70/protfasta-0.1.0.tar.gz (from https://pypi.org/simple/protfasta/) (requires-python:>=3.7), version: 0.1.0
2026-07-08T10:55:18,696   Found link https://files.pythonhosted.org/packages/af/6b/3e3d39ac1d3dd90466bf3c739bbc4437e7b9ce856b3c05c0619ee2eb4e62/protfasta-0.1.1.tar.gz (from https://pypi.org/simple/protfasta/) (requires-python:>=3.7), version: 0.1.1
2026-07-08T10:55:18,697   Found link https://files.pythonhosted.org/packages/b0/16/c4e61affed66df7417ed90bfe3973fe6d8259dec4b2e4616b89569b81a52/protfasta-0.1.2.tar.gz (from https://pypi.org/simple/protfasta/) (requires-python:>=3.7), version: 0.1.2
2026-07-08T10:55:18,698   Found link https://files.pythonhosted.org/packages/c1/e3/643241544561c734493085886f80bc472754df974cd21952df7917a29c2e/protfasta-0.1.3.tar.gz (from https://pypi.org/simple/protfasta/) (requires-python:>=3.7), version: 0.1.3
2026-07-08T10:55:18,699   Found link https://files.pythonhosted.org/packages/71/de/58732fef89ed8a3a45f4bc850c9127687aac82ac2694195f2ddd3dde3a37/protfasta-0.1.4.1.tar.gz (from https://pypi.org/simple/protfasta/) (requires-python:>=3.7), version: 0.1.4.1
2026-07-08T10:55:18,700   Found link https://files.pythonhosted.org/packages/3d/1c/868d14020b262a93f9317338a8424bd713cbd3b025e4db30f63b003d1e8d/protfasta-0.1.5.tar.gz (from https://pypi.org/simple/protfasta/) (requires-python:>=3.7), version: 0.1.5
2026-07-08T10:55:18,701   Found link https://files.pythonhosted.org/packages/af/66/356bfa32c76a02a1fe857dca23909000cfb2888dd9c60fb5b38cf5a118fb/protfasta-0.1.7.tar.gz (from https://pypi.org/simple/protfasta/) (requires-python:>=3.7), version: 0.1.7
2026-07-08T10:55:18,702   Found link https://files.pythonhosted.org/packages/42/f8/bba7aa837021c5d138491990b6a897704c5738b344495e35a396f4efcd5a/protfasta-0.1.8.tar.gz (from https://pypi.org/simple/protfasta/) (requires-python:>=3.6), version: 0.1.8
2026-07-08T10:55:18,703   Found link https://files.pythonhosted.org/packages/9f/95/e41dedf5b225dd911eec23d804f336573b5d4df81974ed07ad6223dc01ec/protfasta-0.1.9.tar.gz (from https://pypi.org/simple/protfasta/) (requires-python:>=3.6), version: 0.1.9
2026-07-08T10:55:18,704   Found link https://files.pythonhosted.org/packages/bc/01/ed9be35e0b9097d6814f9a0021f2cdc8ee15c29d4c77a945cc520cbe5b07/protfasta-0.1.10.tar.gz (from https://pypi.org/simple/protfasta/) (requires-python:>=3.6), version: 0.1.10
2026-07-08T10:55:18,705   Found link https://files.pythonhosted.org/packages/e9/58/2a9ed49fbf534060ba1d56d6fba982c7d7f700ab9bde09f1b7cfa993de15/protfasta-0.1.11.tar.gz (from https://pypi.org/simple/protfasta/) (requires-python:>=3.6), version: 0.1.11
2026-07-08T10:55:18,707   Found link https://files.pythonhosted.org/packages/b9/bc/0e7012b9844b098b6b121ac49632f72ac415c2ebc19dbf309a045011d7b9/protfasta-0.1.12.tar.gz (from https://pypi.org/simple/protfasta/) (requires-python:>=3.6), version: 0.1.12
2026-07-08T10:55:18,708   Found link https://files.pythonhosted.org/packages/ac/02/b8362a0d4c732fe9b07b76046993fa4ed3357d557f576d705c5375d48c48/protfasta-0.1.13.tar.gz (from https://pypi.org/simple/protfasta/) (requires-python:>=3.7,<3.12.0), version: 0.1.13
2026-07-08T10:55:18,708   Found link https://files.pythonhosted.org/packages/e6/ba/57897933096f80984c0d69397229bdf22d8e5cffb8610cc1f0d7e67a83fd/protfasta-0.1.15.1.tar.gz (from https://pypi.org/simple/protfasta/) (requires-python:>=3.7), version: 0.1.15.1
2026-07-08T10:55:18,709   Found link https://files.pythonhosted.org/packages/01/90/770b0a7411f6989c81d19e13b81df12ce95c10e46653e5276778a9384322/protfasta-0.1.15.2.tar.gz (from https://pypi.org/simple/protfasta/) (requires-python:>=3.7), version: 0.1.15.2
2026-07-08T10:55:18,710   Found link https://files.pythonhosted.org/packages/62/1d/c76ef9ea542b853888a3c5c84bec7e5b87ba3cf586299cdef4727bf02f0d/protfasta-0.1.18.tar.gz (from https://pypi.org/simple/protfasta/) (requires-python:>=3.7), version: 0.1.18
2026-07-08T10:55:18,711   Skipping link: No binaries permitted for protfasta: https://files.pythonhosted.org/packages/8e/ba/eaade0e053a108b5cbbb1c4a2ffae673847f7f266a2ebe76d784685d4643/protfasta-0.1.19-py3-none-any.whl (from https://pypi.org/simple/protfasta/) (requires-python:>=3.7)
2026-07-08T10:55:18,712   Found link https://files.pythonhosted.org/packages/9e/4f/e13404d1a6cc0591c5bb664e4faa07cb6bb5eb10aea72e4cbe4b3914a0d8/protfasta-0.1.19.tar.gz (from https://pypi.org/simple/protfasta/) (requires-python:>=3.7), version: 0.1.19
2026-07-08T10:55:18,712   Skipping link: No binaries permitted for protfasta: https://files.pythonhosted.org/packages/03/48/1f22701f0b25c0ec2d61548f4fa87a172e69e8a85d2e1f4314ffa5e5b615/protfasta-0.1.20-py3-none-any.whl (from https://pypi.org/simple/protfasta/) (requires-python:>=3.7)
2026-07-08T10:55:18,713   Found link https://files.pythonhosted.org/packages/02/24/c659af43dfad137e2addc6683a202ec93268be20549f80ce2668b98fc352/protfasta-0.1.20.tar.gz (from https://pypi.org/simple/protfasta/) (requires-python:>=3.7), version: 0.1.20
2026-07-08T10:55:18,714   Skipping link: No binaries permitted for protfasta: https://files.pythonhosted.org/packages/a6/7d/b172aac7b95f928accf9c648a6a9df5da718e61e8a7df4aa3de522d05440/protfasta-0.1.21-py3-none-any.whl (from https://pypi.org/simple/protfasta/) (requires-python:>=3.7)
2026-07-08T10:55:18,715   Found link https://files.pythonhosted.org/packages/f5/f0/5070d87afebbc7e36e4dad4977ad3053d5b122af75a0d01882289ca79982/protfasta-0.1.21.tar.gz (from https://pypi.org/simple/protfasta/) (requires-python:>=3.7), version: 0.1.21
2026-07-08T10:55:18,716   Skipping link: No binaries permitted for protfasta: https://files.pythonhosted.org/packages/d0/bf/b9a166432caf685c5d3a9983794267dc3c15e6b1c7f97225b42e87eaeec4/protfasta-0.1.22-py3-none-any.whl (from https://pypi.org/simple/protfasta/) (requires-python:>=3.7)
2026-07-08T10:55:18,716   Found link https://files.pythonhosted.org/packages/72/bf/7b682a02ca5868ada5a5642c1ee97b343bbe39a289d02a563b258f53a78a/protfasta-0.1.22.tar.gz (from https://pypi.org/simple/protfasta/) (requires-python:>=3.7), version: 0.1.22
2026-07-08T10:55:18,717 Fetching project page and analyzing links: https://www.piwheels.org/simple/protfasta/
2026-07-08T10:55:18,718 Getting page https://www.piwheels.org/simple/protfasta/
2026-07-08T10:55:18,719 Found index url https://www.piwheels.org/simple
2026-07-08T10:55:19,015 Fetched page https://www.piwheels.org/simple/protfasta/ as text/html
2026-07-08T10:55:19,022   Skipping link: No binaries permitted for protfasta: https://www.piwheels.org/simple/protfasta/protfasta-0.1.21-py3-none-any.whl#sha256=ff2be974dbcd1292acd1eed63f6dd3b3988014aaabe958b3962773782ec0b267 (from https://www.piwheels.org/simple/protfasta/) (requires-python:>=3.7)
2026-07-08T10:55:19,023   Skipping link: No binaries permitted for protfasta: https://www.piwheels.org/simple/protfasta/protfasta-0.1.20-py3-none-any.whl#sha256=16c69ec5ef0da4a7a62718e7bff0701aa14e722c7da42b86cf8610cca6d0538d (from https://www.piwheels.org/simple/protfasta/) (requires-python:>=3.7)
2026-07-08T10:55:19,023   Skipping link: No binaries permitted for protfasta: https://www.piwheels.org/simple/protfasta/protfasta-0.1.19-py3-none-any.whl#sha256=5be032f442cd09d0a68e92c9e533aad7f8c4a33718812b35e2b4b38c31dd5cd4 (from https://www.piwheels.org/simple/protfasta/) (requires-python:>=3.7)
2026-07-08T10:55:19,024   Skipping link: No binaries permitted for protfasta: https://archive1.piwheels.org/simple/protfasta/protfasta-0.1.18-py3-none-any.whl#sha256=b57f7b4ff81094312884da9da1bbb955bc31cfeaec96b4e85100a155ce893d25 (from https://www.piwheels.org/simple/protfasta/) (requires-python:>=3.7)
2026-07-08T10:55:19,024   Skipping link: No binaries permitted for protfasta: https://archive1.piwheels.org/simple/protfasta/protfasta-0.1.15.2-py3-none-any.whl#sha256=1caade68c7c93cf5a9136aaace666a8b2352e4f92f34226021cf275f96264a2c (from https://www.piwheels.org/simple/protfasta/) (requires-python:>=3.7)
2026-07-08T10:55:19,025   Skipping link: No binaries permitted for protfasta: https://archive1.piwheels.org/simple/protfasta/protfasta-0.1.15.1-py3-none-any.whl#sha256=5d8190970970f363c275b1b668df0bc4e2bd056c978b443fed42044cf1c6c8b1 (from https://www.piwheels.org/simple/protfasta/) (requires-python:>=3.7)
2026-07-08T10:55:19,025   Skipping link: No binaries permitted for protfasta: https://archive1.piwheels.org/simple/protfasta/protfasta-0.1.13-py3-none-any.whl#sha256=0590857528201752af215a80ec43cf35b6d0da9d7ff41f5182446a7d32ac8589 (from https://www.piwheels.org/simple/protfasta/) (requires-python:>=3.7,<3.12.0)
2026-07-08T10:55:19,026   Skipping link: No binaries permitted for protfasta: https://archive1.piwheels.org/simple/protfasta/protfasta-0.1.12-py3-none-any.whl#sha256=9fb2c41e66622cddaa5f6f431c8777f0504e86ab01317dd6deca1edb3d3a31fd (from https://www.piwheels.org/simple/protfasta/) (requires-python:>=3.6)
2026-07-08T10:55:19,026   Skipping link: No binaries permitted for protfasta: https://archive1.piwheels.org/simple/protfasta/protfasta-0.1.11-py3-none-any.whl#sha256=444fc84e257518010b395eda2039d9a3ab7ecf8fa36c643c461de09826d6586a (from https://www.piwheels.org/simple/protfasta/) (requires-python:>=3.6)
2026-07-08T10:55:19,027   Skipping link: No binaries permitted for protfasta: https://archive1.piwheels.org/simple/protfasta/protfasta-0.1.10-py3-none-any.whl#sha256=2c81ab5f2689ad23ca52774e952da81069272fcab6d352ab5b5ed2acd62f4fff (from https://www.piwheels.org/simple/protfasta/) (requires-python:>=3.6)
2026-07-08T10:55:19,028   Skipping link: No binaries permitted for protfasta: https://archive1.piwheels.org/simple/protfasta/protfasta-0.1.9-py3-none-any.whl#sha256=bbfd31e2c8fa8910d8c6ecdae2a8128c1c7a6bb9370221f070cfe156a5623da6 (from https://www.piwheels.org/simple/protfasta/) (requires-python:>=3.6)
2026-07-08T10:55:19,028   Skipping link: No binaries permitted for protfasta: https://archive1.piwheels.org/simple/protfasta/protfasta-0.1.8-py3-none-any.whl#sha256=ac8962d35239e2241ff04ef37a96a1eef001db1b0b7364eb40a1c040c9f68e65 (from https://www.piwheels.org/simple/protfasta/) (requires-python:>=3.6)
2026-07-08T10:55:19,029   Skipping link: No binaries permitted for protfasta: https://archive1.piwheels.org/simple/protfasta/protfasta-0.1.7-py3-none-any.whl#sha256=d29649a70d3f3029e6a2bede5e67e63b8fb84f3642786d24b9acdecd89563578 (from https://www.piwheels.org/simple/protfasta/) (requires-python:>=3.7)
2026-07-08T10:55:19,030   Skipping link: No binaries permitted for protfasta: https://archive1.piwheels.org/simple/protfasta/protfasta-0.1.5-py3-none-any.whl#sha256=ef65c902eab517ea7a9c3413b5c9d08559b3c027c91474ee1b59598142994760 (from https://www.piwheels.org/simple/protfasta/) (requires-python:>=3.7)
2026-07-08T10:55:19,030   Skipping link: No binaries permitted for protfasta: https://archive1.piwheels.org/simple/protfasta/protfasta-0.1.4.1-py3-none-any.whl#sha256=b28ab8b2dd5bc6d7c2408f6dc218dcc84650e0324ff7fa030ce8ce6d7d61f38e (from https://www.piwheels.org/simple/protfasta/) (requires-python:>=3.7)
2026-07-08T10:55:19,031   Skipping link: No binaries permitted for protfasta: https://archive1.piwheels.org/simple/protfasta/protfasta-0.1.3-py3-none-any.whl#sha256=91891ee7da8ca221a0422b1d779a30cba120d8ea27c573ad3909984a454ac506 (from https://www.piwheels.org/simple/protfasta/) (requires-python:>=3.7)
2026-07-08T10:55:19,031   Skipping link: No binaries permitted for protfasta: https://archive1.piwheels.org/simple/protfasta/protfasta-0.1.2-py3-none-any.whl#sha256=b4d855d9f2f1db5b27d517ccb4fcbd30acfe49eef3e9ad6f1ddfc16fc90147aa (from https://www.piwheels.org/simple/protfasta/) (requires-python:>=3.7)
2026-07-08T10:55:19,032   Skipping link: No binaries permitted for protfasta: https://archive1.piwheels.org/simple/protfasta/protfasta-0.1.1-py3-none-any.whl#sha256=7536ef50f573ff13afcaed3281eb90bdcef2fd632d67501908c4d90627619005 (from https://www.piwheels.org/simple/protfasta/) (requires-python:>=3.7)
2026-07-08T10:55:19,032   Skipping link: No binaries permitted for protfasta: https://archive1.piwheels.org/simple/protfasta/protfasta-0.1.0-py3-none-any.whl#sha256=ddeb14621185337b263b2e2467f6e991300639f791ba613411bd31e98c70ac01 (from https://www.piwheels.org/simple/protfasta/) (requires-python:>=3.7)
2026-07-08T10:55:19,033 Skipping link: not a file: https://www.piwheels.org/simple/protfasta/
2026-07-08T10:55:19,033 Skipping link: not a file: https://pypi.org/simple/protfasta/
2026-07-08T10:55:19,056 Given no hashes to check 1 links for project 'protfasta': discarding no candidates
2026-07-08T10:55:19,075 Collecting protfasta==0.1.22
2026-07-08T10:55:19,077   Created temporary directory: /tmp/pip-unpack-b1fwk1x6
2026-07-08T10:55:19,403   Downloading protfasta-0.1.22.tar.gz (131 kB)
2026-07-08T10:55:19,637   Added protfasta==0.1.22 from https://files.pythonhosted.org/packages/72/bf/7b682a02ca5868ada5a5642c1ee97b343bbe39a289d02a563b258f53a78a/protfasta-0.1.22.tar.gz to build tracker '/tmp/pip-build-tracker-rkgvxizr'
2026-07-08T10:55:19,644   Created temporary directory: /tmp/pip-build-env-1ssf_yip
2026-07-08T10:55:19,686   Installing build dependencies: started
2026-07-08T10:55:19,687   Running command pip subprocess to install build dependencies
2026-07-08T10:55:20,843   Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11)
2026-07-08T10:55:21,254   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-07-08T10:55:21,277   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-07-08T10:55:23,280   Collecting setuptools>=61
2026-07-08T10:55:23,281     Obtaining dependency information for setuptools>=61 from https://www.piwheels.org/simple/setuptools/setuptools-83.0.0-py3-none-any.whl.metadata
2026-07-08T10:55:23,295     Using cached https://www.piwheels.org/simple/setuptools/setuptools-83.0.0-py3-none-any.whl.metadata (6.6 kB)
2026-07-08T10:55:23,417   Collecting versioningit~=2.0
2026-07-08T10:55:23,418     Obtaining dependency information for versioningit~=2.0 from https://archive1.piwheels.org/simple/versioningit/versioningit-2.3.0-py3-none-any.whl.metadata
2026-07-08T10:55:23,704     Using cached https://archive1.piwheels.org/simple/versioningit/versioningit-2.3.0-py3-none-any.whl.metadata (9.4 kB)
2026-07-08T10:55:23,904   Collecting packaging>=17.1
2026-07-08T10:55:23,905     Obtaining dependency information for packaging>=17.1 from https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata
2026-07-08T10:55:23,918     Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl.metadata (3.5 kB)
2026-07-08T10:55:24,109   Using cached https://archive1.piwheels.org/simple/versioningit/versioningit-2.3.0-py3-none-any.whl (35 kB)
2026-07-08T10:55:24,127   Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB)
2026-07-08T10:55:24,218   Using cached https://www.piwheels.org/simple/setuptools/setuptools-83.0.0-py3-none-any.whl (1.0 MB)
2026-07-08T10:55:24,250   Using cached https://archive1.piwheels.org/simple/versioningit/versioningit-2.3.0-py3-none-any.whl (35 kB)
2026-07-08T10:55:24,280   Using cached https://www.piwheels.org/simple/packaging/packaging-26.2-py3-none-any.whl (100 kB)
2026-07-08T10:55:24,372   Using cached https://www.piwheels.org/simple/setuptools/setuptools-83.0.0-py3-none-any.whl (1.0 MB)
2026-07-08T10:55:27,137   Installing collected packages: setuptools, packaging, versioningit
2026-07-08T10:55:30,592     Creating /tmp/pip-build-env-1ssf_yip/overlay/local/bin
2026-07-08T10:55:30,594     changing mode of /tmp/pip-build-env-1ssf_yip/overlay/local/bin/versioningit to 755
2026-07-08T10:55:30,617   Successfully installed packaging-26.2 setuptools-83.0.0 versioningit-2.3.0
2026-07-08T10:55:30,905   Installing build dependencies: finished with status 'done'
2026-07-08T10:55:30,912   Getting requirements to build wheel: started
2026-07-08T10:55:30,913   Running command Getting requirements to build wheel
2026-07-08T10:55:31,577   /tmp/pip-build-env-1ssf_yip/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2026-07-08T10:55:31,577   !!

2026-07-08T10:55:31,579           ********************************************************************************
2026-07-08T10:55:31,579           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2026-07-08T10:55:31,581           By 2027-Feb-18, you need to update your project and remove deprecated calls
2026-07-08T10:55:31,581           or your builds will no longer be supported.

2026-07-08T10:55:31,582           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-07-08T10:55:31,583           ********************************************************************************

2026-07-08T10:55:31,585   !!
2026-07-08T10:55:31,585     corresp(dist, value, root_dir)
2026-07-08T10:55:31,668   running egg_info
2026-07-08T10:55:31,674   writing protfasta.egg-info/PKG-INFO
2026-07-08T10:55:31,678   writing dependency_links to protfasta.egg-info/dependency_links.txt
2026-07-08T10:55:31,680   writing entry points to protfasta.egg-info/entry_points.txt
2026-07-08T10:55:31,682   writing requirements to protfasta.egg-info/requires.txt
2026-07-08T10:55:31,683   writing top-level names to protfasta.egg-info/top_level.txt
2026-07-08T10:55:31,711   reading manifest file 'protfasta.egg-info/SOURCES.txt'
2026-07-08T10:55:31,715   reading manifest template 'MANIFEST.in'
2026-07-08T10:55:31,720   warning: no previously-included files matching '*.py[cod]' found anywhere in distribution
2026-07-08T10:55:31,721   warning: no previously-included files matching '__pycache__' found anywhere in distribution
2026-07-08T10:55:31,722   warning: no previously-included files matching '*.so' found anywhere in distribution
2026-07-08T10:55:31,722   adding license file 'LICENSE'
2026-07-08T10:55:31,727   writing manifest file 'protfasta.egg-info/SOURCES.txt'
2026-07-08T10:55:31,827   Getting requirements to build wheel: finished with status 'done'
2026-07-08T10:55:31,831   Created temporary directory: /tmp/pip-modern-metadata-xj5z67q0
2026-07-08T10:55:31,834   Preparing metadata (pyproject.toml): started
2026-07-08T10:55:31,836   Running command Preparing metadata (pyproject.toml)
2026-07-08T10:55:32,438   /tmp/pip-build-env-1ssf_yip/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2026-07-08T10:55:32,438   !!

2026-07-08T10:55:32,439           ********************************************************************************
2026-07-08T10:55:32,440           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2026-07-08T10:55:32,440           By 2027-Feb-18, you need to update your project and remove deprecated calls
2026-07-08T10:55:32,441           or your builds will no longer be supported.

2026-07-08T10:55:32,442           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-07-08T10:55:32,442           ********************************************************************************

2026-07-08T10:55:32,443   !!
2026-07-08T10:55:32,444     corresp(dist, value, root_dir)
2026-07-08T10:55:32,520   running dist_info
2026-07-08T10:55:32,532   creating /tmp/pip-modern-metadata-xj5z67q0/protfasta.egg-info
2026-07-08T10:55:32,533   writing /tmp/pip-modern-metadata-xj5z67q0/protfasta.egg-info/PKG-INFO
2026-07-08T10:55:32,537   writing dependency_links to /tmp/pip-modern-metadata-xj5z67q0/protfasta.egg-info/dependency_links.txt
2026-07-08T10:55:32,539   writing entry points to /tmp/pip-modern-metadata-xj5z67q0/protfasta.egg-info/entry_points.txt
2026-07-08T10:55:32,541   writing requirements to /tmp/pip-modern-metadata-xj5z67q0/protfasta.egg-info/requires.txt
2026-07-08T10:55:32,542   writing top-level names to /tmp/pip-modern-metadata-xj5z67q0/protfasta.egg-info/top_level.txt
2026-07-08T10:55:32,543   writing manifest file '/tmp/pip-modern-metadata-xj5z67q0/protfasta.egg-info/SOURCES.txt'
2026-07-08T10:55:32,567   reading manifest file '/tmp/pip-modern-metadata-xj5z67q0/protfasta.egg-info/SOURCES.txt'
2026-07-08T10:55:32,569   reading manifest template 'MANIFEST.in'
2026-07-08T10:55:32,573   warning: no previously-included files matching '*.py[cod]' found anywhere in distribution
2026-07-08T10:55:32,574   warning: no previously-included files matching '__pycache__' found anywhere in distribution
2026-07-08T10:55:32,574   warning: no previously-included files matching '*.so' found anywhere in distribution
2026-07-08T10:55:32,575   adding license file 'LICENSE'
2026-07-08T10:55:32,578   writing manifest file '/tmp/pip-modern-metadata-xj5z67q0/protfasta.egg-info/SOURCES.txt'
2026-07-08T10:55:32,579   creating '/tmp/pip-modern-metadata-xj5z67q0/protfasta-0.1.22.dist-info'
2026-07-08T10:55:32,707   Preparing metadata (pyproject.toml): finished with status 'done'
2026-07-08T10:55:32,711   Source in /tmp/pip-wheel-5szh03dy/protfasta_595f82b6629046088170b2260fee681a has version 0.1.22, which satisfies requirement protfasta==0.1.22 from https://files.pythonhosted.org/packages/72/bf/7b682a02ca5868ada5a5642c1ee97b343bbe39a289d02a563b258f53a78a/protfasta-0.1.22.tar.gz
2026-07-08T10:55:32,712   Removed protfasta==0.1.22 from https://files.pythonhosted.org/packages/72/bf/7b682a02ca5868ada5a5642c1ee97b343bbe39a289d02a563b258f53a78a/protfasta-0.1.22.tar.gz from build tracker '/tmp/pip-build-tracker-rkgvxizr'
2026-07-08T10:55:32,718 Created temporary directory: /tmp/pip-unpack-ukt8zx1g
2026-07-08T10:55:32,718 Building wheels for collected packages: protfasta
2026-07-08T10:55:32,723   Created temporary directory: /tmp/pip-wheel-4ngzfe8j
2026-07-08T10:55:32,723   Destination directory: /tmp/pip-wheel-4ngzfe8j
2026-07-08T10:55:32,725   Building wheel for protfasta (pyproject.toml): started
2026-07-08T10:55:32,727   Running command Building wheel for protfasta (pyproject.toml)
2026-07-08T10:55:33,321   /tmp/pip-build-env-1ssf_yip/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2026-07-08T10:55:33,321   !!

2026-07-08T10:55:33,323           ********************************************************************************
2026-07-08T10:55:33,323           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2026-07-08T10:55:33,324           By 2027-Feb-18, you need to update your project and remove deprecated calls
2026-07-08T10:55:33,324           or your builds will no longer be supported.

2026-07-08T10:55:33,325           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-07-08T10:55:33,326           ********************************************************************************

2026-07-08T10:55:33,327   !!
2026-07-08T10:55:33,327     corresp(dist, value, root_dir)
2026-07-08T10:55:33,394   running bdist_wheel
2026-07-08T10:55:33,415   running build
2026-07-08T10:55:33,416   running build_py
2026-07-08T10:55:33,423   creating build/lib/protfasta
2026-07-08T10:55:33,425   copying protfasta/protfasta.py -> build/lib/protfasta
2026-07-08T10:55:33,427   copying protfasta/_configs.py -> build/lib/protfasta
2026-07-08T10:55:33,429   copying protfasta/protfasta_exceptions.py -> build/lib/protfasta
2026-07-08T10:55:33,430   copying protfasta/io.py -> build/lib/protfasta
2026-07-08T10:55:33,433   copying protfasta/__init__.py -> build/lib/protfasta
2026-07-08T10:55:33,436   copying protfasta/_version.py -> build/lib/protfasta
2026-07-08T10:55:33,437   copying protfasta/utilities.py -> build/lib/protfasta
2026-07-08T10:55:33,440   creating build/lib/protfasta/scripts
2026-07-08T10:55:33,441   copying protfasta/scripts/__init__.py -> build/lib/protfasta/scripts
2026-07-08T10:55:33,443   copying protfasta/scripts/pfasta.py -> build/lib/protfasta/scripts
2026-07-08T10:55:33,446   creating build/lib/protfasta/tests
2026-07-08T10:55:33,446   copying protfasta/tests/conftest.py -> build/lib/protfasta/tests
2026-07-08T10:55:33,448   copying protfasta/tests/test_protfasta.py -> build/lib/protfasta/tests
2026-07-08T10:55:33,452   copying protfasta/tests/__init__.py -> build/lib/protfasta/tests
2026-07-08T10:55:33,453   copying protfasta/tests/test_pfasta_cli.py -> build/lib/protfasta/tests
2026-07-08T10:55:33,457   running egg_info
2026-07-08T10:55:33,468   writing protfasta.egg-info/PKG-INFO
2026-07-08T10:55:33,472   writing dependency_links to protfasta.egg-info/dependency_links.txt
2026-07-08T10:55:33,473   writing entry points to protfasta.egg-info/entry_points.txt
2026-07-08T10:55:33,475   writing requirements to protfasta.egg-info/requires.txt
2026-07-08T10:55:33,476   writing top-level names to protfasta.egg-info/top_level.txt
2026-07-08T10:55:33,490   reading manifest file 'protfasta.egg-info/SOURCES.txt'
2026-07-08T10:55:33,493   reading manifest template 'MANIFEST.in'
2026-07-08T10:55:33,498   warning: no previously-included files matching '*.py[cod]' found anywhere in distribution
2026-07-08T10:55:33,498   warning: no previously-included files matching '__pycache__' found anywhere in distribution
2026-07-08T10:55:33,499   warning: no previously-included files matching '*.so' found anywhere in distribution
2026-07-08T10:55:33,500   adding license file 'LICENSE'
2026-07-08T10:55:33,503   writing manifest file 'protfasta.egg-info/SOURCES.txt'
2026-07-08T10:55:33,510   creating build/lib/protfasta/data
2026-07-08T10:55:33,511   copying protfasta/data/README.md -> build/lib/protfasta/data
2026-07-08T10:55:33,513   copying protfasta/data/look_and_say.dat -> build/lib/protfasta/data
2026-07-08T10:55:33,515   creating build/lib/protfasta/tests/pfasta_test
2026-07-08T10:55:33,517   copying protfasta/tests/pfasta_test/100_seqs_with_allvalid.fasta -> build/lib/protfasta/tests/pfasta_test
2026-07-08T10:55:33,520   copying protfasta/tests/pfasta_test/100_seqs_with_invalid.fasta -> build/lib/protfasta/tests/pfasta_test
2026-07-08T10:55:33,524   copying protfasta/tests/pfasta_test/input_test.fasta -> build/lib/protfasta/tests/pfasta_test
2026-07-08T10:55:33,526   copying protfasta/tests/pfasta_test/run_coverage_tests.sh -> build/lib/protfasta/tests/pfasta_test
2026-07-08T10:55:33,529   creating build/lib/protfasta/tests/outdata
2026-07-08T10:55:33,530   copying protfasta/tests/outdata/readme.md -> build/lib/protfasta/tests/outdata
2026-07-08T10:55:33,532   copying protfasta/tests/outdata/test_out_1.fasta -> build/lib/protfasta/tests/outdata
2026-07-08T10:55:33,534   copying protfasta/tests/outdata/test_out_2.fasta -> build/lib/protfasta/tests/outdata
2026-07-08T10:55:33,537   creating build/lib/protfasta/data/test_data
2026-07-08T10:55:33,538   copying protfasta/data/test_data/aligned_seq_all_valid.fasta -> build/lib/protfasta/data/test_data
2026-07-08T10:55:33,540   copying protfasta/data/test_data/aligned_seq_all_valid_convertable.fasta -> build/lib/protfasta/data/test_data
2026-07-08T10:55:33,542   copying protfasta/data/test_data/aligned_seq_all_valid_unconvertable.fasta -> build/lib/protfasta/data/test_data
2026-07-08T10:55:33,543   copying protfasta/data/test_data/fixable_invalid.fasta -> build/lib/protfasta/data/test_data
2026-07-08T10:55:33,545   copying protfasta/data/test_data/test_data_with_bad_chars.fa -> build/lib/protfasta/data/test_data
2026-07-08T10:55:33,548   copying protfasta/data/test_data/test_data_with_nonstandard_chars.fa -> build/lib/protfasta/data/test_data
2026-07-08T10:55:33,550   copying protfasta/data/test_data/testset_1.fasta -> build/lib/protfasta/data/test_data
2026-07-08T10:55:33,552   copying protfasta/data/test_data/testset_duplicate.fasta -> build/lib/protfasta/data/test_data
2026-07-08T10:55:33,554   copying protfasta/data/test_data/testset_duplicate_seqs.fasta -> build/lib/protfasta/data/test_data
2026-07-08T10:55:33,556   copying protfasta/data/test_data/unfixable_invalid.fasta -> build/lib/protfasta/data/test_data
2026-07-08T10:55:33,571   installing to build/bdist.linux-armv7l/wheel
2026-07-08T10:55:33,572   running install
2026-07-08T10:55:33,595   running install_lib
2026-07-08T10:55:33,601   creating build/bdist.linux-armv7l/wheel
2026-07-08T10:55:33,603   creating build/bdist.linux-armv7l/wheel/protfasta
2026-07-08T10:55:33,604   copying build/lib/protfasta/protfasta.py -> build/bdist.linux-armv7l/wheel/./protfasta
2026-07-08T10:55:33,607   copying build/lib/protfasta/_configs.py -> build/bdist.linux-armv7l/wheel/./protfasta
2026-07-08T10:55:33,608   copying build/lib/protfasta/protfasta_exceptions.py -> build/bdist.linux-armv7l/wheel/./protfasta
2026-07-08T10:55:33,611   copying build/lib/protfasta/io.py -> build/bdist.linux-armv7l/wheel/./protfasta
2026-07-08T10:55:33,614   copying build/lib/protfasta/__init__.py -> build/bdist.linux-armv7l/wheel/./protfasta
2026-07-08T10:55:33,617   creating build/bdist.linux-armv7l/wheel/protfasta/scripts
2026-07-08T10:55:33,618   copying build/lib/protfasta/scripts/__init__.py -> build/bdist.linux-armv7l/wheel/./protfasta/scripts
2026-07-08T10:55:33,619   copying build/lib/protfasta/scripts/pfasta.py -> build/bdist.linux-armv7l/wheel/./protfasta/scripts
2026-07-08T10:55:33,622   creating build/bdist.linux-armv7l/wheel/protfasta/tests
2026-07-08T10:55:33,623   copying build/lib/protfasta/tests/conftest.py -> build/bdist.linux-armv7l/wheel/./protfasta/tests
2026-07-08T10:55:33,625   copying build/lib/protfasta/tests/test_protfasta.py -> build/bdist.linux-armv7l/wheel/./protfasta/tests
2026-07-08T10:55:33,630   creating build/bdist.linux-armv7l/wheel/protfasta/tests/pfasta_test
2026-07-08T10:55:33,631   copying build/lib/protfasta/tests/pfasta_test/run_coverage_tests.sh -> build/bdist.linux-armv7l/wheel/./protfasta/tests/pfasta_test
2026-07-08T10:55:33,634   copying build/lib/protfasta/tests/pfasta_test/input_test.fasta -> build/bdist.linux-armv7l/wheel/./protfasta/tests/pfasta_test
2026-07-08T10:55:33,636   copying build/lib/protfasta/tests/pfasta_test/100_seqs_with_allvalid.fasta -> build/bdist.linux-armv7l/wheel/./protfasta/tests/pfasta_test
2026-07-08T10:55:33,639   copying build/lib/protfasta/tests/pfasta_test/100_seqs_with_invalid.fasta -> build/bdist.linux-armv7l/wheel/./protfasta/tests/pfasta_test
2026-07-08T10:55:33,642   copying build/lib/protfasta/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./protfasta/tests
2026-07-08T10:55:33,645   creating build/bdist.linux-armv7l/wheel/protfasta/tests/outdata
2026-07-08T10:55:33,646   copying build/lib/protfasta/tests/outdata/test_out_1.fasta -> build/bdist.linux-armv7l/wheel/./protfasta/tests/outdata
2026-07-08T10:55:33,648   copying build/lib/protfasta/tests/outdata/test_out_2.fasta -> build/bdist.linux-armv7l/wheel/./protfasta/tests/outdata
2026-07-08T10:55:33,650   copying build/lib/protfasta/tests/outdata/readme.md -> build/bdist.linux-armv7l/wheel/./protfasta/tests/outdata
2026-07-08T10:55:33,652   copying build/lib/protfasta/tests/test_pfasta_cli.py -> build/bdist.linux-armv7l/wheel/./protfasta/tests
2026-07-08T10:55:33,655   creating build/bdist.linux-armv7l/wheel/protfasta/data
2026-07-08T10:55:33,656   copying build/lib/protfasta/data/README.md -> build/bdist.linux-armv7l/wheel/./protfasta/data
2026-07-08T10:55:33,657   copying build/lib/protfasta/data/look_and_say.dat -> build/bdist.linux-armv7l/wheel/./protfasta/data
2026-07-08T10:55:33,660   creating build/bdist.linux-armv7l/wheel/protfasta/data/test_data
2026-07-08T10:55:33,661   copying build/lib/protfasta/data/test_data/test_data_with_bad_chars.fa -> build/bdist.linux-armv7l/wheel/./protfasta/data/test_data
2026-07-08T10:55:33,663   copying build/lib/protfasta/data/test_data/aligned_seq_all_valid_convertable.fasta -> build/bdist.linux-armv7l/wheel/./protfasta/data/test_data
2026-07-08T10:55:33,664   copying build/lib/protfasta/data/test_data/testset_1.fasta -> build/bdist.linux-armv7l/wheel/./protfasta/data/test_data
2026-07-08T10:55:33,666   copying build/lib/protfasta/data/test_data/aligned_seq_all_valid.fasta -> build/bdist.linux-armv7l/wheel/./protfasta/data/test_data
2026-07-08T10:55:33,668   copying build/lib/protfasta/data/test_data/testset_duplicate_seqs.fasta -> build/bdist.linux-armv7l/wheel/./protfasta/data/test_data
2026-07-08T10:55:33,670   copying build/lib/protfasta/data/test_data/aligned_seq_all_valid_unconvertable.fasta -> build/bdist.linux-armv7l/wheel/./protfasta/data/test_data
2026-07-08T10:55:33,672   copying build/lib/protfasta/data/test_data/fixable_invalid.fasta -> build/bdist.linux-armv7l/wheel/./protfasta/data/test_data
2026-07-08T10:55:33,674   copying build/lib/protfasta/data/test_data/testset_duplicate.fasta -> build/bdist.linux-armv7l/wheel/./protfasta/data/test_data
2026-07-08T10:55:33,676   copying build/lib/protfasta/data/test_data/unfixable_invalid.fasta -> build/bdist.linux-armv7l/wheel/./protfasta/data/test_data
2026-07-08T10:55:33,677   copying build/lib/protfasta/data/test_data/test_data_with_nonstandard_chars.fa -> build/bdist.linux-armv7l/wheel/./protfasta/data/test_data
2026-07-08T10:55:33,679   copying build/lib/protfasta/_version.py -> build/bdist.linux-armv7l/wheel/./protfasta
2026-07-08T10:55:33,681   copying build/lib/protfasta/utilities.py -> build/bdist.linux-armv7l/wheel/./protfasta
2026-07-08T10:55:33,683   running install_egg_info
2026-07-08T10:55:33,689   Copying protfasta.egg-info to build/bdist.linux-armv7l/wheel/./protfasta-0.1.22-py3.11.egg-info
2026-07-08T10:55:33,702   running install_scripts
2026-07-08T10:55:33,715   creating build/bdist.linux-armv7l/wheel/protfasta-0.1.22.dist-info/WHEEL
2026-07-08T10:55:33,717   creating '/tmp/pip-wheel-4ngzfe8j/.tmp-8ewoeuyg/protfasta-0.1.22-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2026-07-08T10:55:33,722   adding 'protfasta/__init__.py'
2026-07-08T10:55:33,724   adding 'protfasta/_configs.py'
2026-07-08T10:55:33,725   adding 'protfasta/_version.py'
2026-07-08T10:55:33,728   adding 'protfasta/io.py'
2026-07-08T10:55:33,730   adding 'protfasta/protfasta.py'
2026-07-08T10:55:33,731   adding 'protfasta/protfasta_exceptions.py'
2026-07-08T10:55:33,733   adding 'protfasta/utilities.py'
2026-07-08T10:55:33,735   adding 'protfasta/data/README.md'
2026-07-08T10:55:33,736   adding 'protfasta/data/look_and_say.dat'
2026-07-08T10:55:33,738   adding 'protfasta/data/test_data/aligned_seq_all_valid.fasta'
2026-07-08T10:55:33,739   adding 'protfasta/data/test_data/aligned_seq_all_valid_convertable.fasta'
2026-07-08T10:55:33,740   adding 'protfasta/data/test_data/aligned_seq_all_valid_unconvertable.fasta'
2026-07-08T10:55:33,741   adding 'protfasta/data/test_data/fixable_invalid.fasta'
2026-07-08T10:55:33,743   adding 'protfasta/data/test_data/test_data_with_bad_chars.fa'
2026-07-08T10:55:33,745   adding 'protfasta/data/test_data/test_data_with_nonstandard_chars.fa'
2026-07-08T10:55:33,746   adding 'protfasta/data/test_data/testset_1.fasta'
2026-07-08T10:55:33,747   adding 'protfasta/data/test_data/testset_duplicate.fasta'
2026-07-08T10:55:33,748   adding 'protfasta/data/test_data/testset_duplicate_seqs.fasta'
2026-07-08T10:55:33,750   adding 'protfasta/data/test_data/unfixable_invalid.fasta'
2026-07-08T10:55:33,751   adding 'protfasta/scripts/__init__.py'
2026-07-08T10:55:33,754   adding 'protfasta/scripts/pfasta.py'
2026-07-08T10:55:33,755   adding 'protfasta/tests/__init__.py'
2026-07-08T10:55:33,756   adding 'protfasta/tests/conftest.py'
2026-07-08T10:55:33,758   adding 'protfasta/tests/test_pfasta_cli.py'
2026-07-08T10:55:33,763   adding 'protfasta/tests/test_protfasta.py'
2026-07-08T10:55:33,765   adding 'protfasta/tests/outdata/readme.md'
2026-07-08T10:55:33,767   adding 'protfasta/tests/outdata/test_out_1.fasta'
2026-07-08T10:55:33,768   adding 'protfasta/tests/outdata/test_out_2.fasta'
2026-07-08T10:55:33,778   adding 'protfasta/tests/pfasta_test/100_seqs_with_allvalid.fasta'
2026-07-08T10:55:33,786   adding 'protfasta/tests/pfasta_test/100_seqs_with_invalid.fasta'
2026-07-08T10:55:33,789   adding 'protfasta/tests/pfasta_test/input_test.fasta'
2026-07-08T10:55:33,790   adding 'protfasta/tests/pfasta_test/run_coverage_tests.sh'
2026-07-08T10:55:33,793   adding 'protfasta-0.1.22.dist-info/licenses/LICENSE'
2026-07-08T10:55:33,794   adding 'protfasta-0.1.22.dist-info/METADATA'
2026-07-08T10:55:33,796   adding 'protfasta-0.1.22.dist-info/WHEEL'
2026-07-08T10:55:33,796   adding 'protfasta-0.1.22.dist-info/entry_points.txt'
2026-07-08T10:55:33,797   adding 'protfasta-0.1.22.dist-info/top_level.txt'
2026-07-08T10:55:33,798   adding 'protfasta-0.1.22.dist-info/RECORD'
2026-07-08T10:55:33,802   removing build/bdist.linux-armv7l/wheel
2026-07-08T10:55:33,914   Building wheel for protfasta (pyproject.toml): finished with status 'done'
2026-07-08T10:55:33,921   Created wheel for protfasta: filename=protfasta-0.1.22-py3-none-any.whl size=139936 sha256=cfee9857da4278520425a047c178b6c4f768e3d925f54f9a1ca706eac0446401
2026-07-08T10:55:33,922   Stored in directory: /tmp/pip-ephem-wheel-cache-ci096tjo/wheels/ee/8c/31/aa659f2149f36054966264a60ed90c108bb05263a19d2736ad
2026-07-08T10:55:33,934 Successfully built protfasta
2026-07-08T10:55:33,942 Removed build tracker: '/tmp/pip-build-tracker-rkgvxizr'